Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

47465951 .. 47468641

Gene Structure 2691 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58009

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGGGTAGCCACAAAACTTTCATTCATCTTCTTCTTCTTGTTCATTTTTTCCTTCGAGCCACAGCTTTTGCAAACTCTAGGGCTGCTAATGAGAGTTTCAGTGCGGCTTGCATTGAGGAGGAGAGGAAGGCCCTCCTTGAATTCAAAAAAGGCCCTTTCGAAGTGCTTCCTGATTGGGATGGGGTAGACTGCTGCAAATGGGATGGCATAGCCTGCAGTTACCAAACAGGCCATGTCATCTCGGTACACCTTTCCTTTTATGCACTCTCTGGTCCACTTCCGAAATCAATCGGAAACCTGTCACATTTGCATACCTTGGTGCTTTCAGAAAATGCACTCTCTGGTCCACTGCCGAAGTCAATAGGAAATCTGTCACATTTGCAGATCCTAAACCTCTCAGTAAATGCCTTCTCCGGTCCACTGCCAACGTCAATAGGAAACCTGCCACATTTGCAGACCTTGGTGCTCTCAGAAAATGCAATCTCTGGTCCACTTCCGGCGTCAATAGGAAACCTGCCACATTTGCAGACCTTGGTGCTCTCAAGAAATGCAATCTCTGGTTCTCTTCCGGCGTCAATACGAAACCTGTCACATTTGCAGACCTTGGTGCTCTCAGAAAATGCAATCTCTGGTCAACTACCTACTTGGATAGGAAATCTGTTAGATTTGCAAAATCTGGACCTCTCAAGCAATGTAATATCTGGTCCAATTCCGAAGTCAATAGGAAGCCTCCCGCAGTTGCAGATACTTCACCTCTCAGTCAATACAATCTCCGGTCCACTTCCGATATCAATAGGCAATCTGTCACATTTGCAGGCTCTGCACCTCACAGCAAATGTAATCTCTGGTCCACTTCCCACGTCAATAGGAGATCTGGAAAATTTACGCATGCTGGACCTCTTTGACAACTCAATCTCCGGTCCACTACCTACGTCAATAGGAAATCTGTCATGTTTACAGAGCCTGGGACTTGATGGAAACCCAAAATTGAATGGAACCATTCCAGAAAGTATCGGACAACTTAGCAAGTTGACGGATTTGTTTCTTTGGAGTGGTTGGAACGGCATCATATCTGAAAATCATTTTCAGAACCTCACAAAATTGGTACAGTTTGGTTTATCATGTCCTGCATCTAACTCTCTTGTTTTCACCGTCAATCACAACTGGATTCCTCTCTTCAATCTTACGTCTCTCTCTATCACTGATTGCAAGCTAATGAGCCCTGCATTTCCAGCATGGCTGAGAACTCAAACATTCCTTACTAGTATAACTCTCTCAAATGTTGGAATTTCAGACACAATACCTGATTGGTTTCTGAGAAATGCACCATTCCTTGGAATGGTGGATCTTTCTAAGAACCAGTTAAGGGGAAGGCTTCCTAAATCGGTAAATTCACTTCTTCGAAGTGTTTATTTGAATATCAACAATTTGGAGGGTTCCCTTCCATTTTGGCCAAATGTAACAGATCTCATCTTGGCAAGCAATAGATTTTCAGGACCAATACCCTTGAACATTGGCAATCAGATGCCAATGTTGTCTAATCTAGATCTTTCAAGAAATAATATACACGGTACTATTCCTTCTTTTTTGAATAGCACCGAGTTGCAGAGTCTTGACCTCTCAAGGAATTATTTATCAGGAAGCATTCCTATGGATTGGTCGGGGTTAGAAGGCCTCATAGACCTAGATCTTTCCAATAACAATCTATCTGGTCAAATTCCCTTCACTATGTGCTCACAACTACCAATGCTTGAATGGTTGAGATTAAGCAACAACAATTTTTCCGGGGAGCTTCCAATGTTCTTGCAGTATTGTCAATGGCTGGGTGCACTGGATCTTTCAAGAAACAAATTCTCTGGGGCATTACCAGAGTCGATTGGAGAATGCCTACAATCATTGTCATATCTACTTCTAGGAGCCAACATGCTTGCTGGAAATATACCTCAACAATTATGCGGTCTCTCCAATCTTCAGGTTTTAGACCTTTCTCATAATAATCTATCAGGTTCCCTCCCTAGATGTCTTGGCAAGTTGGAAAAACTGACAAAAGTAGGTGGTTGGCCAACCTTTGTCATTCCTATGCATATGGATTTAAATGTCAAAGGAGTAGAATACGATTATACTTCTGATCTTGTAGGACTCATATACAAGATAGACCTATCAAGTAATAACTTATGGGGAGAAATACCGAAGGAGATAACAAATCTCACCGCCTTGGGTAGTTTGAATTTGTCACATAACCGTTTGACTGGAAAGATACCAGATGGTATCGGAAGCTTACGTCTGTTAGAGGCTCTTGACCTCTCTAGTAATCATCTACGGGGTCCAATTCCTTCAAGCATGACCTCCATGACTTCACTAAGCAAATTGAACTTGTCACATAACAACTTTTCTGGGCCAATTCCATCAACCAACCAGTTCCTTACCTTCAACGATCCATCCTCATTTGGAGGAAACTCAGGGCTTTGTGGGCATCCATTGCCAACCGAATGCAGCTCATCCTCCAACAATGATAAGGATCCAGAGGTTGAAGAAGATGAATGTGAAAAAATGTGGTTGTATGCAATCACAGGGTTGGGGTTCATTGTGGGATTTTGGGCTGTGTTTGGCAGCTTGGTGATAAAGAGGTCATGGAGACATGCTTATTTCAAGTTTCTTGACAAGATGAAAGATAGGCTCTCCTTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

896

Amino Acids

97.64

Weight (kDa)

5.99

Isoelectric Point (pI)

40.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	39 - 73	4.5e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	92 - 156	5.6e-09	Leucine-rich repeat region
LRR_8	PF13855	143 - 185	2.2e-06	Leucine rich repeat
LRR_14	PF23598	144 - 254	1.4e-15	Leucine-rich repeat region
LRR_8	PF13855	173 - 233	1.5e-08	Leucine rich repeat
LRR_8	PF13855	197 - 256	3.8e-08	Leucine rich repeat
LRR_14	PF23598	239 - 419	4e-18	Leucine-rich repeat region
LRR_8	PF13855	245 - 305	5.4e-07	Leucine rich repeat
LRR_8	PF13855	269 - 328	1.2e-06	Leucine rich repeat
LRR_8	PF13855	534 - 594	4e-08	Leucine rich repeat
LRR_14	PF23598	562 - 683	7.9e-07	Leucine-rich repeat region
LRR_8	PF13855	716 - 773	3.1e-08	Leucine rich repeat
LRR_14	PF23598	721 - 794	1.8e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	450, 522
AccB7I	CCANNNNNTGG	1 cut(s)	1334
AccI	GTMKAC	1 cut(s)	186
AciI	CCGC	4 cut(s)	104, 734, 1956, 2211
AclWI	GGATC	6 cut(s)	379, 1353, 1842, 2429, 2513, 2526
AcoI	YGGCCR	2 cut(s)	1451, 2060
AcsI	RAATTY	7 cut(s)	140, 880, 1287, 1390, 1716, 1850, 2227
AcuI	CTGAAG	1 cut(s)	1955
AcyI	GRCGYC	2 cut(s)	500, 572
AdeI	CACNNNGTG	1 cut(s)	1731
AfaI	GTAC	3 cut(s)	246, 1107, 1573
AfiI	CCNNNNNNNGG	3 cut(s)	1334, 1339, 1366
AhlI	ACTAGT	1 cut(s)	1262
AjiI	CACGTC	1 cut(s)	861
AjnI	CCWGG	1 cut(s)	963
AluBI	AGCT	6 cut(s)	65, 1213, 1792, 2277, 2496, 2613
AluI	AGCT	6 cut(s)	65, 1213, 1792, 2277, 2496, 2613
Alw21I	GWGCWC	5 cut(s)	468, 540, 612, 1736, 1831
Alw26I	GTCTC	3 cut(s)	1194, 1964, 2629
Alw44I	GTGCAC	1 cut(s)	1827
AlwI	GGATC	6 cut(s)	379, 1353, 1842, 2429, 2513, 2526
AlwNI	CAGNNNCTG	2 cut(s)	820, 964
AoxI	GGCC	7 cut(s)	129, 151, 229, 1451, 1672, 2060, 2396
ApaLI	GTGCAC	1 cut(s)	1827
ApeKI	GCWGC	4 cut(s)	83, 192, 2493, 2610
ApoI	RAATTY	7 cut(s)	140, 880, 1287, 1390, 1716, 1850, 2227
Asp700I	GAANNNNTTC	1 cut(s)	165
AsuC2I	CCSGG	1 cut(s)	1786
AsuHPI	GGTGA	4 cut(s)	743, 1141, 2200, 2629
AsuII	TTCGAA	2 cut(s)	159, 1402
BaeGI	GKGCMC	1 cut(s)	1831
BalI	TGGCCA	2 cut(s)	1453, 2062
BamHI	GGATCC	1 cut(s)	2518
BanII	GRGCYC	1 cut(s)	1223
BarI	GAAGNNNNNNTAC	4 cut(s)	1380, 1412, 1564, 1596
Bbv12I	GWGCWC	5 cut(s)	468, 540, 612, 1736, 1831
BbvI	GCAGC	4 cut(s)	70, 179, 2505, 2622
BccI	CCATC	6 cut(s)	173, 197, 968, 2258, 2413, 2446
BceAI	ACGGC	1 cut(s)	1078
BciT130I	CCWGG	1 cut(s)	965
BcnI	CCSGG	1 cut(s)	1786
BcoDI	GTCTC	3 cut(s)	1194, 1964, 2629
BcuI	ACTAGT	1 cut(s)	1262
BfaI	CTAG	7 cut(s)	78, 1263, 1544, 1685, 1913, 2016, 2307
BfmI	CTRYAG	1 cut(s)	214
BfuAI	ACCTGC	2 cut(s)	450, 522
BglII	AGATCT	4 cut(s)	871, 1465, 1546, 1687
BisI	GCNGC	5 cut(s)	84, 105, 193, 2494, 2611
BlsI	GCNGC	5 cut(s)	85, 106, 194, 2495, 2612
Bme1390I	CCNGG	2 cut(s)	965, 1786
BmgBI	CACGTC	1 cut(s)	861
BmiI	GGNNCC	6 cut(s)	997, 1438, 1918, 2008, 2325, 2520
BmrFI	CCNGG	2 cut(s)	965, 1786
BmsI	GCATC	4 cut(s)	1074, 1139, 1515, 2482
Bpu14I	TTCGAA	2 cut(s)	159, 1402
BpuEI	CTTGAG	3 cut(s)	526, 670, 1606
BpuMI	CCSGG	1 cut(s)	1786
BsaBI	GATNNNNATC	1 cut(s)	2517
BsaHI	GRCGYC	2 cut(s)	500, 572
BsaI	GGTCTC	1 cut(s)	1964
BsaJI	CCNNGG	8 cut(s)	315, 459, 531, 603, 964, 1333, 1785, 2214
BsaWI	WCCGGW	3 cut(s)	413, 773, 917
BsaXI	ACNNNNNCTCC	2 cut(s)	899, 929
Bsc4I	CCNNNNNNNGG	3 cut(s)	1334, 1339, 1366
Bse1I	ACTGG	5 cut(s)	1169, 1360, 1836, 2254, 2416
Bse3DI	GCAATG	2 cut(s)	697, 2477
Bse8I	GATNNNNATC	1 cut(s)	2517
BseBI	CCWGG	1 cut(s)	965
BseDI	CCNNGG	8 cut(s)	315, 459, 531, 603, 964, 1333, 1785, 2214
BseGI	GGATG	5 cut(s)	184, 208, 2438, 2473, 2498
BseJI	GATNNNNATC	1 cut(s)	2517
BseLI	CCNNNNNNNGG	3 cut(s)	1334, 1339, 1366
BseMI	GCAATG	2 cut(s)	697, 2477
BseMII	CTCAG	7 cut(s)	411, 483, 627, 771, 1232, 1307, 2472
BseNI	ACTGG	5 cut(s)	1169, 1360, 1836, 2254, 2416
BseRI	GAGGAG	2 cut(s)	131, 134
BseSI	GKGCMC	1 cut(s)	1831
BseXI	GCAGC	4 cut(s)	70, 179, 2505, 2622
BseYI	CCCAGC	1 cut(s)	1822
BsgI	GTGCAG	1 cut(s)	806
BshFI	GGCC	7 cut(s)	131, 153, 231, 1453, 1674, 2062, 2398
BsiHKAI	GWGCWC	5 cut(s)	468, 540, 612, 1736, 1831
BsiSI	CCGG	6 cut(s)	414, 497, 569, 774, 918, 1785
BslFI	GGGAC	1 cut(s)	981
BslI	CCNNNNNNNGG	3 cut(s)	1334, 1339, 1366
BsmAI	GTCTC	3 cut(s)	1194, 1964, 2629
BsmBI	CGTCTC	1 cut(s)	1194
BsmFI	GGGAC	1 cut(s)	981
BsmI	GAATGC	3 cut(s)	1644, 1889, 2495
BsnI	GGCC	7 cut(s)	131, 153, 231, 1453, 1674, 2062, 2398
Bso31I	GGTCTC	1 cut(s)	1964
Bsp119I	TTCGAA	2 cut(s)	159, 1402
Bsp1286I	GDGCHC	6 cut(s)	468, 540, 612, 1223, 1736, 1831
BspACI	CCGC	4 cut(s)	104, 734, 1956, 2211
BspANI	GGCC	7 cut(s)	131, 153, 231, 1453, 1674, 2062, 2398
BspCNI	CTCAG	7 cut(s)	410, 482, 626, 770, 1233, 1308, 2471
BspLI	GGNNCC	6 cut(s)	997, 1438, 1918, 2008, 2325, 2520
BspMAI	CTGCAG	1 cut(s)	218
BspMI	ACCTGC	2 cut(s)	450, 522
BspPI	GGATC	6 cut(s)	379, 1353, 1842, 2429, 2513, 2526
BspT104I	TTCGAA	2 cut(s)	159, 1402
BspTNI	GGTCTC	1 cut(s)	1964
BsrDI	GCAATG	2 cut(s)	697, 2477
BsrI	ACTGG	5 cut(s)	1169, 1360, 1836, 2254, 2416
BssECI	CCNNGG	8 cut(s)	315, 459, 531, 603, 964, 1333, 1785, 2214
BssNI	GRCGYC	2 cut(s)	500, 572
BssT1I	CCWWGG	6 cut(s)	315, 459, 531, 603, 1333, 2214
Bst2UI	CCWGG	1 cut(s)	965
Bst4CI	ACNGT	4 cut(s)	1110, 1153, 1571, 2243
Bst6I	CTCTTC	2 cut(s)	570, 1181
BstACI	GRCGYC	2 cut(s)	500, 572
BstAPI	GCANNNNNTGC	3 cut(s)	213, 820, 2479
BstBI	TTCGAA	2 cut(s)	159, 1402
BstC8I	GCNNGC	7 cut(s)	109, 214, 816, 890, 1211, 1480, 1929
BstF5I	GGATG	5 cut(s)	184, 208, 2438, 2473, 2498
BstMAI	GTCTC	3 cut(s)	1194, 1964, 2629
BstMWI	GCNNNNNNNGC	7 cut(s)	213, 451, 523, 820, 1232, 2470, 2479
BstNI	CCWGG	1 cut(s)	965
BstNSI	RCATGY	3 cut(s)	892, 1927, 2642
BstSCI	CCNGG	2 cut(s)	963, 1784
BstSFI	CTRYAG	1 cut(s)	214
BstSLI	GKGCMC	1 cut(s)	1831
BstV1I	GCAGC	4 cut(s)	70, 179, 2505, 2622
BstX2I	RGATCY	8 cut(s)	384, 871, 1345, 1465, 1546, 1687, 1834, 2518
BstYI	RGATCY	8 cut(s)	384, 871, 1345, 1465, 1546, 1687, 1834, 2518
BsuRI	GGCC	7 cut(s)	131, 153, 231, 1453, 1674, 2062, 2398
BtrI	CACGTC	1 cut(s)	861
BtsCI	GGATG	5 cut(s)	184, 208, 2438, 2473, 2498
BtsI	GCAGTG	2 cut(s)	347, 419
BtsIMutI	CAGTG	5 cut(s)	106, 347, 419, 1200, 1829
BveI	ACCTGC	2 cut(s)	450, 522
Cac8I	GCNNGC	7 cut(s)	109, 214, 816, 890, 1211, 1480, 1929
CaiI	CAGNNNCTG	2 cut(s)	820, 964
CseI	GACGC	2 cut(s)	489, 561
Csp6I	GTAC	3 cut(s)	245, 1106, 1572
CspCI	CAANNNNNGTGG	2 cut(s)	49, 84
CviQI	GTAC	3 cut(s)	245, 1106, 1572
DraI	TTTAAA	1 cut(s)	2094
DraIII	CACNNNGTG	1 cut(s)	1731
EaeI	YGGCCR	2 cut(s)	1451, 2060
Eam1104I	CTCTTC	2 cut(s)	570, 1181
EarI	CTCTTC	2 cut(s)	570, 1181
Eco130I	CCWWGG	6 cut(s)	315, 459, 531, 603, 1333, 2214
Eco147I	AGGCCT	1 cut(s)	1674
Eco24I	GRGCYC	1 cut(s)	1223
Eco31I	GGTCTC	1 cut(s)	1964
Eco32I	GATATC	1 cut(s)	789
Eco57I	CTGAAG	1 cut(s)	1955
EcoO109I	RGGNCCY	2 cut(s)	130, 152
EcoRI	GAATTC	1 cut(s)	140
EcoRII	CCWGG	1 cut(s)	963
EcoRV	GATATC	1 cut(s)	789
EcoT14I	CCWWGG	6 cut(s)	315, 459, 531, 603, 1333, 2214
EcoT22I	ATGCAT	1 cut(s)	2085
EcoT38I	GRGCYC	1 cut(s)	1223
ErhI	CCWWGG	6 cut(s)	315, 459, 531, 603, 1333, 2214
Esp3I	CGTCTC	1 cut(s)	1194
FaqI	GGGAC	1 cut(s)	981
FauI	CCCGC	1 cut(s)	741
FauNDI	CATATG	1 cut(s)	2085
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	5 cut(s)	84, 105, 193, 2494, 2611
FokI	GGATG	5 cut(s)	191, 215, 2425, 2460, 2485
FriOI	GRGCYC	1 cut(s)	1223
Fsp4HI	GCNGC	5 cut(s)	84, 105, 193, 2494, 2611
FspBI	CTAG	7 cut(s)	78, 1263, 1544, 1685, 1913, 2016, 2307
GluI	GCNGC	5 cut(s)	84, 105, 193, 2494, 2611
GsaI	CCCAGC	1 cut(s)	1826
HaeIII	GGCC	7 cut(s)	131, 153, 231, 1453, 1674, 2062, 2398
HapII	CCGG	6 cut(s)	414, 497, 569, 774, 918, 1785
HgaI	GACGC	2 cut(s)	489, 561
Hin1I	GRCGYC	2 cut(s)	500, 572
HincII	GTYRAC	2 cut(s)	635, 1032
HindII	GTYRAC	2 cut(s)	635, 1032
HindIII	AAGCTT	1 cut(s)	2275
HinfI	GANTC	4 cut(s)	1168, 1609, 1871, 2139
HpaII	CCGG	6 cut(s)	414, 497, 569, 774, 918, 1785
HphI	GGTGA	4 cut(s)	743, 1141, 2200, 2629
HpyCH4III	ACNGT	4 cut(s)	1110, 1153, 1571, 2243
HpyCH4IV	ACGT	5 cut(s)	428, 860, 932, 1187, 2281
HpyF10VI	GCNNNNNNNGC	7 cut(s)	213, 451, 523, 820, 1232, 2470, 2479
HpySE526I	ACGT	5 cut(s)	428, 860, 932, 1187, 2281
Hsp92I	GRCGYC	2 cut(s)	500, 572
LmnI	GCTCC	2 cut(s)	1789, 1916
Lsp1109I	GCAGC	4 cut(s)	70, 179, 2505, 2622
LweI	GCATC	4 cut(s)	1074, 1139, 1515, 2482
MaeI	CTAG	7 cut(s)	78, 1263, 1544, 1685, 1913, 2016, 2307
MaeII	ACGT	5 cut(s)	428, 860, 932, 1187, 2281
MaeIII	GTNAC	8 cut(s)	218, 300, 372, 588, 804, 1459, 2232, 2376
MboII	GAAGA	9 cut(s)	20, 23, 26, 557, 1168, 1391, 1961, 2543, 2546
MflI	RGATCY	8 cut(s)	384, 871, 1345, 1465, 1546, 1687, 1834, 2518
MhlI	GDGCHC	6 cut(s)	468, 540, 612, 1223, 1736, 1831
MlsI	TGGCCA	2 cut(s)	1453, 2062
MluNI	TGGCCA	2 cut(s)	1453, 2062
MlyI	GAGTC	3 cut(s)	1618, 1880, 2133
MmeI	TCCRAC	4 cut(s)	1037, 1264, 2013, 2529
Mox20I	TGGCCA	2 cut(s)	1453, 2062
Mph1103I	ATGCAT	1 cut(s)	2085
MroXI	GAANNNNTTC	1 cut(s)	165
MscI	TGGCCA	2 cut(s)	1453, 2062
MseI	TTAA	3 cut(s)	1364, 1766, 2093
MslI	CAYNNNNRTG	2 cut(s)	1649, 2078
Msp20I	TGGCCA	2 cut(s)	1453, 2062
MspI	CCGG	6 cut(s)	414, 497, 569, 774, 918, 1785
MspR9I	CCNGG	2 cut(s)	965, 1786
Mva1269I	GAATGC	3 cut(s)	1644, 1889, 2495
MvaI	CCWGG	1 cut(s)	965
MwoI	GCNNNNNNNGC	7 cut(s)	213, 451, 523, 820, 1232, 2470, 2479
NciI	CCSGG	1 cut(s)	1786
NdeI	CATATG	1 cut(s)	2085
NlaIV	GGNNCC	6 cut(s)	997, 1438, 1918, 2008, 2325, 2520
NmuCI	GTSAC	6 cut(s)	300, 372, 588, 804, 2232, 2376
NsiI	ATGCAT	1 cut(s)	2085
NspI	RCATGY	3 cut(s)	892, 1927, 2642
NspV	TTCGAA	2 cut(s)	159, 1402
PaeI	GCATGC	1 cut(s)	892
PceI	AGGCCT	1 cut(s)	1674
PctI	GAATGC	3 cut(s)	1644, 1889, 2495
PdmI	GAANNNNTTC	1 cut(s)	165
PfeI	GAWTC	1 cut(s)	1168
PflMI	CCANNNNNTGG	1 cut(s)	1334
PkrI	GCNGC	5 cut(s)	85, 106, 194, 2495, 2612
PleI	GAGTC	3 cut(s)	1617, 1879, 2133
PpsI	GAGTC	3 cut(s)	1617, 1879, 2133
Psp6I	CCWGG	1 cut(s)	963
PspFI	CCCAGC	1 cut(s)	1822
PspGI	CCWGG	1 cut(s)	963
PspN4I	GGNNCC	6 cut(s)	997, 1438, 1918, 2008, 2325, 2520
PstI	CTGCAG	1 cut(s)	218
PstNI	CAGNNNCTG	2 cut(s)	820, 964
PsuI	RGATCY	8 cut(s)	384, 871, 1345, 1465, 1546, 1687, 1834, 2518
RsaI	GTAC	3 cut(s)	246, 1107, 1573
RsaNI	GTAC	3 cut(s)	245, 1106, 1572
RseI	CAYNNNNRTG	2 cut(s)	1649, 2078
SaqAI	TTAA	3 cut(s)	1364, 1766, 2093
SatI	GCNGC	5 cut(s)	84, 105, 193, 2494, 2611
SchI	GAGTC	3 cut(s)	1618, 1880, 2133
ScrFI	CCNGG	2 cut(s)	965, 1786
SduI	GDGCHC	6 cut(s)	468, 540, 612, 1223, 1736, 1831
SfaNI	GCATC	4 cut(s)	1074, 1139, 1515, 2482
SfcI	CTRYAG	1 cut(s)	214
SfuI	TTCGAA	2 cut(s)	159, 1402
SmiI	ATTTAAAT	1 cut(s)	2094
SmiMI	CAYNNNNRTG	2 cut(s)	1649, 2078
SmlI	CTYRAG	3 cut(s)	541, 685, 1621
SmoI	CTYRAG	3 cut(s)	541, 685, 1621
SpeI	ACTAGT	1 cut(s)	1262
SphI	GCATGC	1 cut(s)	892
SseBI	AGGCCT	1 cut(s)	1674
SsiI	CCGC	4 cut(s)	104, 734, 1956, 2211
SspMI	CTAG	7 cut(s)	78, 1263, 1544, 1685, 1913, 2016, 2307
StuI	AGGCCT	1 cut(s)	1674
StyD4I	CCNGG	2 cut(s)	963, 1784
StyI	CCWWGG	6 cut(s)	315, 459, 531, 603, 1333, 2214
SwaI	ATTTAAAT	1 cut(s)	2094
TaaI	ACNGT	4 cut(s)	1110, 1153, 1571, 2243
TaiI	ACGT	5 cut(s)	431, 863, 935, 1190, 2284
TaqI	TCGA	4 cut(s)	55, 159, 1402, 1874
TauI	GCSGC	1 cut(s)	107
TfiI	GAWTC	1 cut(s)	1168
Tru1I	TTAA	3 cut(s)	1364, 1766, 2093
Tru9I	TTAA	3 cut(s)	1364, 1766, 2093
TscAI	CASTG	5 cut(s)	106, 354, 426, 1207, 1836
TseFI	GTSAC	6 cut(s)	300, 372, 588, 804, 2232, 2376
TseI	GCWGC	4 cut(s)	83, 192, 2493, 2610
Tsp45I	GTSAC	6 cut(s)	300, 372, 588, 804, 2232, 2376
TspDTI	ATGAA	6 cut(s)	10, 14, 32, 2553, 2572, 2681
TspGWI	ACGGA	1 cut(s)	1049
TspRI	CASTG	5 cut(s)	106, 354, 426, 1207, 1836
Van91I	CCANNNNNTGG	1 cut(s)	1334
VneI	GTGCAC	1 cut(s)	1827
XapI	RAATTY	7 cut(s)	140, 880, 1287, 1390, 1716, 1850, 2227
XbaI	TCTAGA	1 cut(s)	1543
XceI	RCATGY	3 cut(s)	892, 1927, 2642
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1752
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	165
XspI	CTAG	7 cut(s)	78, 1263, 1544, 1685, 1913, 2016, 2307
Zsp2I	ATGCAT	1 cut(s)	2085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.