Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Forward (+)

31189676 .. 31192636

Gene Structure 2961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g32560.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2961 bp

ATGGCTAGCAGAAAATCCTCCTTTAAACTTCTTTTGCCTGTCTTCCTTCTTTTGTTAACCGCATACTCTACCTTCCCTGAAGCCAAGTTGGCCAACTCTGGTGTTAAGGGTTTTAGGGTGGCTTGTAATGAGGAGGAAAGAGCAGCCCTCCTTAAATTCAGGCAAGGCCTTAAAGATCCTTATGGTCGGCTTTCGTCTTGGGTTGGGGAAGACTGCTGCAATTGGACAGGCATAGGGTGCAGCAACCAAATAGGCAATGTCCTCAAGCTTGATCTTAGCAACCCAAATTACTATGTCGAAAAACCTACAGCAGCAACTGGTTATATGCGGGCATGCTTAGGCGGTGAGTTAGATCCTTCTTTGCTTAGTTTAACTTACTTGAATTACTTGGACCTCAGTTGCAACAATTTTCAAGGAATTGCTATTCCAAGTTTCCTAGGTTCACTCAAGAAATTGAGGTATCTTGACCTCTCCCAATCATCATTTGGAGGAATGGTTCCTCCTCAACTAGGGAATCTGTCAAACTTGTTTTACCTTGATCTGAGTCATCTGACCACATATTCATATCCACAAAATCCATGGGTTTCAGATTTTTATTGGCTCTCTAGTCTCTCTTCCTTGCAGTACCTGAGTTTGGGAAACTTAAACCTTAGCCTGGCAACAACCAATTGGCTACCTGCTGTTAATATGCTTCCTTCACTGTTAGAGTTACATTTGCCTGACTGTGAACTTCGTAACCTCCCTCAATCTATTCCATTTGTAAATTTCACATCACTACAGGTCCTTGAACTCTCACATAACCACTTTAACACTTCATTGCCTCAGTGGCTTTTCAATATTAGTACCCTTGTGACAGTAGTTCTCTCTCATTCTAAATTTACTGGCTCCACCCCGCAAATTTCATGGAAAAATAACCATTGCAGCCTGCAGACTTTAGACCTATCATATAATTCCGTAAGTATGGAAATACAGGAACTTATTGAAGGTTTGTCCAGATGCAGTAATAGTAGCTTAAAATTGTTAGATGTCAAATATAATAATGTCAGGGGGTTACTGCCTGATTCTTTGGGTTCCCTTCAATATTTGGAAACTCTCAGAATCAGTCAAAATGCACTCTTTGGTCCACTTCCAACAACAATAGGAAACCTGTCACATTTGCAGGTCCTCGACCTAGCATTTAACATGATGAATGGCACAATTCCAAAAAGTATTGGACAACTTGCACAACTAAATTCCTTAGATCTCTGGGGTAGTTCATGGGAAGGCATCATATCTGAAATTCATTTTAGCAATCTCTCTCTCTTGACTGATCTTTCATTGTCGTCTACAAATAACTCTTTGGTGTTCCACTTCAGTCATGAGTGGATTCCCCCTTTCCCTCTTTATAGTCTCTCTATCAGTGATTGCAAACTGATGAATCCTAGATTTCCCACTTGGCTCAGAAATCAGAGTTTCCTCAATGAAATAACTCTCTCAACTGTGGGAATTTCAGATACAATACCTGATTGGTTTTGGGGAAAGTCACCATATCCTTATTGGTGGTCGAATGTGGATCTCTCCAATAACCAACTAAGAGGACAACTTCCTAAATTGGTAAATTTTGCTGAAGAGGCATCTGTCAATTTGAATAGCAACTCCTTGGAGGGTTCCCTTCCATTTTGGCCAAATGTGATTGAACTCGCTTTGGCAAGCAATCGATTTTCTGGACCAATTCCCTTAAACATTGGCCAGGAGATGCCAAATATGAATATCCTAGATCTTTCAAGGAATAATCTAAATGGTAGCATTCCTTCTTCCATAAGTAAGATGAAGAGTTTGTCTTCTCTTGATCTCTCGAGGAATTATTTATCCGGAAATATCCCTAGTGATTGGAAGGGATTACAGAGCTTGACGACCATAGATTTTTCCAATAACAATCTTTTTGGTCAAATTCCAAGCTCCATGTGCTCACAACTACCTTCACTTTCCTGGTTGAGGTTAAGCAATAACAATCTTTCCGGGGAGATAGCACTGTCCTTGCGAAATTGTACAAATCTGTATACACTTGATCTTGGAGGGAACAAGTTCTCAGGGACCATACCAACATGGATTGGAGATGACCTACATCTATTTTCATATTTACTTCTTGGAGCCAACATGTTCACTGGAAATATTCCTCAGCAAATATGTGGCCTCCCAGATGTTCACGTTTTAAACCTTTCTCAAAATATATTATCAGGCTCCATCCCTAGATGCCTTGGTAATTTGGAACAAATGAAACATCGGGTTTACTTGTTCAAGCCATGGCCACTAACCACATTCATGAATACACCTTTTCTTGATCTTCAGCATATGGACTTAAAGGTGAAAAGATTAGCTTATGAATATACCAATAAGCTCTTGCCTCTCATAAACAGCATTGACCTGTCAAGCAACAACCTATCAGGAGAAATACCAGAAGAGATAACAAATCTTACCTATTTGGGTAGCTTGATTTTATCTCGGAACCAATTGACAGGAAAGATACCACAAGGCTTTGGAAGCTTAGACAAGTTAGAAACTCTTGACCTGTCGGTTAATCATCTTCGGGGCCCTATTCCCATAAGCATGACTTCTATGACTGCACTGAACAACTTGAACTTGTCATACAACAACTTGTCCGGGCCAATTCCATCAACCAACCAATTCCATACTTTCATTGATCCAGCCATATATGAAGGGAACTCAAGACTTTGTGGACCTCCATTGCCAACCCCATGCTCAACATCCAATAATGAGGATCCACAACCTAAAGAAGATGCAGTTGAAGATGAAGATGAGTCTGGAAAGATATGGTTCTACGTAAGCACTGCGTTGGGATTCAAAGTGGGATTTTGGGCTGTTTTTGGCAGTCTAGTGATAAAGAGGCCGTGGAGACACGCCTATTTCCAGTTTCTTGACAAACTGAAAGTCAGGCTTCTCCTGGTAACCACAGGAAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

987

Amino Acids

109.91

Weight (kDa)

5.9

Isoelectric Point (pI)

34.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	44 - 81	1.7e-12	Leucine rich repeat N-terminal domain
LRR_8	PF13855	126 - 183	9.7e-09	Leucine rich repeat
LRR_14	PF23598	337 - 487	6.3e-12	Leucine-rich repeat region
LRR_8	PF13855	556 - 616	6.4e-07	Leucine rich repeat
LRR_8	PF13855	797 - 855	3.6e-06	Leucine rich repeat
LRR_8	PF13855	821 - 879	5.9e-06	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	685, 1150
AccI	GTMKAC	2 cut(s)	1325, 2039
AccIII	TCCGGA	1 cut(s)	1850
AciI	CCGC	4 cut(s)	60, 328, 342, 893
AclWI	GGATC	6 cut(s)	170, 347, 1560, 2675, 2753, 2766
AcoI	YGGCCR	4 cut(s)	90, 1661, 1726, 2285
AcsI	RAATTY	9 cut(s)	155, 763, 875, 897, 1231, 1278, 1485, 1597, 1929
AcuI	CTGAAG	4 cut(s)	99, 1336, 1626, 2309
AfaI	GTAC	3 cut(s)	626, 844, 2029
AfiI	CCNNNNNNNGG	4 cut(s)	509, 634, 655, 1974
AflIII	ACRYGT	1 cut(s)	2136
AjnI	CCWGG	4 cut(s)	654, 1728, 1967, 2940
AloI	GAACNNNNNNTCC	2 cut(s)	480, 512
AluBI	AGCT	8 cut(s)	268, 1011, 1887, 1938, 2357, 2377, 2469, 2523
AluI	AGCT	8 cut(s)	268, 1011, 1887, 1938, 2357, 2377, 2469, 2523
Alw21I	GWGCWC	1 cut(s)	1949
Alw26I	GTCTC	3 cut(s)	614, 1394, 2887
AlwI	GGATC	6 cut(s)	170, 347, 1560, 2675, 2753, 2766
AlwNI	CAGNNNCTG	2 cut(s)	317, 628
Ama87I	CYCGRG	1 cut(s)	1834
Aor13HI	TCCGGA	1 cut(s)	1850
AoxI	GGCC	9 cut(s)	90, 166, 1661, 1726, 2170, 2285, 2569, 2642, 2885
ApaI	GGGCCC	1 cut(s)	2573
ApeKI	GCWGC	5 cut(s)	143, 216, 240, 311, 921
ApoI	RAATTY	9 cut(s)	155, 763, 875, 897, 1231, 1278, 1485, 1597, 1929
ArsI	GACNNNNNNTTYG	2 cut(s)	2913, 2945
Asp700I	GAANNNNTTC	1 cut(s)	2063
AspA2I	CCTAGG	1 cut(s)	436
AsuC2I	CCSGG	2 cut(s)	1999, 2641
AsuHPI	GGTGA	3 cut(s)	356, 1515, 2356
AsuNHI	GCTAGC	1 cut(s)	5
AvaI	CYCGRG	1 cut(s)	1834
AvaII	GGWCC	7 cut(s)	391, 781, 1121, 1162, 1706, 2073, 2717
AvrII	CCTAGG	1 cut(s)	436
BaeGI	GKGCMC	1 cut(s)	2573
BalI	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
BamHI	GGATCC	1 cut(s)	2758
BanII	GRGCYC	1 cut(s)	2573
BarI	GAAGNNNNNNTAC	2 cut(s)	1774, 1806
BbsI	GAAGAC	3 cut(s)	34, 216, 1812
Bbv12I	GWGCWC	1 cut(s)	1949
BbvCI	CCTCAGC	1 cut(s)	2157
BbvI	GCAGC	5 cut(s)	155, 203, 252, 323, 933
BccI	CCATC	2 cut(s)	2231, 2659
BceAI	ACGGC	1 cut(s)	2872
BciT130I	CCWGG	4 cut(s)	656, 1730, 1969, 2942
BcnI	CCSGG	2 cut(s)	1999, 2641
BcoDI	GTCTC	3 cut(s)	614, 1394, 2887
BfmI	CTRYAG	3 cut(s)	306, 776, 926
BfuAI	ACCTGC	2 cut(s)	685, 1150
BglI	GCCNNNNNGGC	2 cut(s)	89, 826
BglII	AGATCT	2 cut(s)	1240, 1756
BisI	GCNGC	5 cut(s)	144, 217, 241, 312, 922
BlnI	CCTAGG	1 cut(s)	436
BlsI	GCNGC	5 cut(s)	145, 218, 242, 313, 923
Bme1390I	CCNGG	6 cut(s)	656, 1730, 1969, 1999, 2641, 2942
Bme18I	GGWCC	7 cut(s)	391, 781, 1121, 1162, 1706, 2073, 2717
BmeT110I	CYCGRG	1 cut(s)	1834
BmrFI	CCNGG	6 cut(s)	656, 1730, 1969, 1999, 2641, 2942
BmsI	GCATC	6 cut(s)	986, 1275, 1622, 1725, 2222, 2767
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	3 cut(s)	34, 216, 1812
BplI	GAGNNNNNCTC	2 cut(s)	132, 164
Bpu10I	CCTNAGC	3 cut(s)	337, 650, 2157
BpuEI	CTTGAG	3 cut(s)	248, 431, 2689
BpuMI	CCSGG	2 cut(s)	1999, 2641
Bsa29I	ATCGAT	1 cut(s)	1696
BsaAI	YACGTR	1 cut(s)	2821
BsaJI	CCNNGG	7 cut(s)	436, 578, 1638, 1998, 2236, 2282, 2888
BsaWI	WCCGGW	1 cut(s)	1850
BsaXI	ACNNNNNCTCC	2 cut(s)	480, 510
Bsc4I	CCNNNNNNNGG	4 cut(s)	509, 634, 655, 1974
Bse1I	ACTGG	4 cut(s)	322, 886, 2149, 2908
Bse3DI	GCAATG	4 cut(s)	262, 815, 916, 2723
BseAI	TCCGGA	1 cut(s)	1850
BseBI	CCWGG	4 cut(s)	656, 1730, 1969, 2942
BseCI	ATCGAT	1 cut(s)	1696
BseDI	CCNNGG	7 cut(s)	436, 578, 1638, 1998, 2236, 2282, 2888
BseGI	GGATG	2 cut(s)	2223, 2744
BseLI	CCNNNNNNNGG	4 cut(s)	509, 634, 655, 1974
BseMI	GCAATG	4 cut(s)	262, 815, 916, 2723
BseMII	CTCAG	8 cut(s)	409, 533, 620, 836, 1108, 1453, 2082, 2171
BseNI	ACTGG	4 cut(s)	322, 886, 2149, 2908
BseRI	GAGGAG	2 cut(s)	146, 492
BseSI	GKGCMC	1 cut(s)	2573
BseXI	GCAGC	5 cut(s)	155, 203, 252, 323, 933
BsgI	GTGCAG	2 cut(s)	259, 2586
BshFI	GGCC	9 cut(s)	92, 168, 1663, 1728, 2172, 2287, 2571, 2644, 2887
BshVI	ATCGAT	1 cut(s)	1696
BsiHKAI	GWGCWC	1 cut(s)	1949
BsiHKCI	CYCGRG	1 cut(s)	1834
BsiSI	CCGG	3 cut(s)	1851, 1998, 2640
BslFI	GGGAC	1 cut(s)	2086
BslI	CCNNNNNNNGG	4 cut(s)	509, 634, 655, 1974
BsmAI	GTCTC	3 cut(s)	614, 1394, 2887
BsmFI	GGGAC	1 cut(s)	2086
BsmI	GAATGC	1 cut(s)	1785
BsnI	GGCC	9 cut(s)	92, 168, 1663, 1728, 2172, 2287, 2571, 2644, 2887
BsoBI	CYCGRG	1 cut(s)	1834
Bsp120I	GGGCCC	1 cut(s)	2569
Bsp1286I	GDGCHC	2 cut(s)	1949, 2573
Bsp13I	TCCGGA	1 cut(s)	1850
Bsp1407I	TGTACA	1 cut(s)	2027
Bsp19I	CCATGG	2 cut(s)	578, 2282
BspACI	CCGC	4 cut(s)	60, 328, 342, 893
BspANI	GGCC	9 cut(s)	92, 168, 1663, 1728, 2172, 2287, 2571, 2644, 2887
BspCNI	CTCAG	8 cut(s)	408, 534, 621, 835, 1107, 1452, 2081, 2170
BspDI	ATCGAT	1 cut(s)	1696
BspEI	TCCGGA	1 cut(s)	1850
BspHI	TCATGA	2 cut(s)	1357, 2301
BspMAI	CTGCAG	1 cut(s)	930
BspMI	ACCTGC	2 cut(s)	685, 1150
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	6 cut(s)	170, 347, 1560, 2675, 2753, 2766
BsrDI	GCAATG	4 cut(s)	262, 815, 916, 2723
BsrGI	TGTACA	1 cut(s)	2027
BsrI	ACTGG	4 cut(s)	322, 886, 2149, 2908
BssECI	CCNNGG	7 cut(s)	436, 578, 1638, 1998, 2236, 2282, 2888
BssNAI	GTATAC	1 cut(s)	2040
BssT1I	CCWWGG	5 cut(s)	436, 578, 1638, 2236, 2282
Bst1107I	GTATAC	1 cut(s)	2040
Bst2UI	CCWGG	4 cut(s)	656, 1730, 1969, 2942
Bst4CI	ACNGT	5 cut(s)	702, 725, 856, 1480, 2013
Bst6I	CTCTTC	4 cut(s)	619, 1602, 1805, 2433
BstAPI	GCANNNNNTGC	1 cut(s)	237
BstAUI	TGTACA	1 cut(s)	2027
BstBAI	YACGTR	1 cut(s)	2821
BstC8I	GCNNGC	5 cut(s)	7, 330, 334, 926, 1690
BstDSI	CCRYGG	3 cut(s)	578, 2282, 2888
BstEII	GGTNACC	1 cut(s)	2944
BstENI	CCTNNNNNAGG	2 cut(s)	507, 1972
BstF5I	GGATG	2 cut(s)	2223, 2744
BstMAI	GTCTC	3 cut(s)	614, 1394, 2887
BstMWI	GCNNNNNNNGC	6 cut(s)	89, 237, 826, 1610, 1944, 2520
BstNI	CCWGG	4 cut(s)	656, 1730, 1969, 2942
BstNSI	RCATGY	2 cut(s)	336, 2140
BstPI	GGTNACC	1 cut(s)	2944
BstSCI	CCNGG	6 cut(s)	654, 1728, 1967, 1997, 2639, 2940
BstSFI	CTRYAG	3 cut(s)	306, 776, 926
BstSLI	GKGCMC	1 cut(s)	2573
BstSNI	TACGTA	1 cut(s)	2821
BstV1I	GCAGC	5 cut(s)	155, 203, 252, 323, 933
BstV2I	GAAGAC	3 cut(s)	34, 216, 1812
BstX2I	RGATCY	6 cut(s)	175, 352, 1240, 1552, 1756, 2758
BstYI	RGATCY	6 cut(s)	175, 352, 1240, 1552, 1756, 2758
BstZ17I	GTATAC	1 cut(s)	2040
Bsu15I	ATCGAT	1 cut(s)	1696
BsuRI	GGCC	9 cut(s)	92, 168, 1663, 1728, 2172, 2287, 2571, 2644, 2887
BsuTUI	ATCGAT	1 cut(s)	1696
BtgI	CCRYGG	3 cut(s)	578, 2282, 2888
BtsCI	GGATG	2 cut(s)	2223, 2744
BtsI	GCAGTG	1 cut(s)	2826
BtsIMutI	CAGTG	7 cut(s)	698, 830, 1405, 2009, 2142, 2603, 2826
BveI	ACCTGC	2 cut(s)	685, 1150
Cac8I	GCNNGC	5 cut(s)	7, 330, 334, 926, 1690
CaiI	CAGNNNCTG	2 cut(s)	317, 628
CciI	TCATGA	2 cut(s)	1357, 2301
ClaI	ATCGAT	1 cut(s)	1696
Csp6I	GTAC	3 cut(s)	625, 843, 2028
CviQI	GTAC	3 cut(s)	625, 843, 2028
DraI	TTTAAA	2 cut(s)	25, 2193
EaeI	YGGCCR	4 cut(s)	90, 1661, 1726, 2285
Eam1104I	CTCTTC	4 cut(s)	619, 1602, 1805, 2433
EarI	CTCTTC	4 cut(s)	619, 1602, 1805, 2433
Eco105I	TACGTA	1 cut(s)	2821
Eco130I	CCWWGG	5 cut(s)	436, 578, 1638, 2236, 2282
Eco147I	AGGCCT	1 cut(s)	168
Eco24I	GRGCYC	1 cut(s)	2573
Eco47I	GGWCC	7 cut(s)	391, 781, 1121, 1162, 1706, 2073, 2717
Eco57I	CTGAAG	4 cut(s)	99, 1336, 1626, 2309
Eco88I	CYCGRG	1 cut(s)	1834
Eco91I	GGTNACC	1 cut(s)	2944
EcoNI	CCTNNNNNAGG	2 cut(s)	507, 1972
EcoO109I	RGGNCCY	4 cut(s)	781, 1162, 2569, 2570
EcoO65I	GGTNACC	1 cut(s)	2944
EcoRII	CCWGG	4 cut(s)	654, 1728, 1967, 2940
EcoT14I	CCWWGG	5 cut(s)	436, 578, 1638, 2236, 2282
EcoT38I	GRGCYC	1 cut(s)	2573
ErhI	CCWWGG	5 cut(s)	436, 578, 1638, 2236, 2282
FalI	AAGNNNNNCTT	6 cut(s)	2341, 2373, 2575, 2607, 2919, 2951
FaqI	GGGAC	1 cut(s)	2086
FauI	CCCGC	2 cut(s)	321, 900
FauNDI	CATATG	1 cut(s)	2331
FblI	GTMKAC	2 cut(s)	1325, 2039
Fnu4HI	GCNGC	5 cut(s)	144, 217, 241, 312, 922
FokI	GGATG	2 cut(s)	2210, 2731
FriOI	GRGCYC	1 cut(s)	2573
Fsp4HI	GCNGC	5 cut(s)	144, 217, 241, 312, 922
GluI	GCNGC	5 cut(s)	144, 217, 241, 312, 922
HaeIII	GGCC	9 cut(s)	92, 168, 1663, 1728, 2172, 2287, 2571, 2644, 2887
HapII	CCGG	3 cut(s)	1851, 1998, 2640
HincII	GTYRAC	1 cut(s)	57
HindII	GTYRAC	1 cut(s)	57
HindIII	AAGCTT	2 cut(s)	266, 2521
HinfI	GANTC	8 cut(s)	514, 544, 1061, 1098, 1366, 1417, 2798, 2838
HpaI	GTTAAC	1 cut(s)	57
HpaII	CCGG	3 cut(s)	1851, 1998, 2640
HphI	GGTGA	3 cut(s)	356, 1515, 2356
Hpy188I	TCNGA	9 cut(s)	543, 552, 589, 1097, 1276, 1442, 1449, 1492, 2484
HpyCH4III	ACNGT	5 cut(s)	702, 725, 856, 1480, 2013
HpyCH4IV	ACGT	2 cut(s)	2187, 2820
HpyF10VI	GCNNNNNNNGC	6 cut(s)	89, 237, 826, 1610, 1944, 2520
HpySE526I	ACGT	2 cut(s)	2187, 2820
Kpn2I	TCCGGA	1 cut(s)	1850
KspAI	GTTAAC	1 cut(s)	57
LmnI	GCTCC	4 cut(s)	890, 1943, 2129, 2225
Lsp1109I	GCAGC	5 cut(s)	155, 203, 252, 323, 933
LweI	GCATC	6 cut(s)	986, 1275, 1622, 1725, 2222, 2767
MaeII	ACGT	2 cut(s)	2187, 2820
MaeIII	GTNAC	7 cut(s)	708, 734, 850, 1050, 1149, 1521, 2944
MfeI	CAATTG	3 cut(s)	220, 667, 2489
MflI	RGATCY	6 cut(s)	175, 352, 1240, 1552, 1756, 2758
MhlI	GDGCHC	2 cut(s)	1949, 2573
MlsI	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
MluNI	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
MlyI	GAGTC	2 cut(s)	553, 2807
MmeI	TCCRAC	1 cut(s)	1154
Mox20I	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
MroI	TCCGGA	1 cut(s)	1850
MroXI	GAANNNNTTC	1 cut(s)	2063
MscI	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
MslI	CAYNNNNRTG	2 cut(s)	2300, 2585
Msp20I	TGGCCA	4 cut(s)	92, 1663, 1728, 2287
MspI	CCGG	3 cut(s)	1851, 1998, 2640
MspR9I	CCNGG	6 cut(s)	656, 1730, 1969, 1999, 2641, 2942
MunI	CAATTG	3 cut(s)	220, 667, 2489
Mva1269I	GAATGC	1 cut(s)	1785
MvaI	CCWGG	4 cut(s)	656, 1730, 1969, 2942
MwoI	GCNNNNNNNGC	6 cut(s)	89, 237, 826, 1610, 1944, 2520
NciI	CCSGG	2 cut(s)	1999, 2641
NcoI	CCATGG	2 cut(s)	578, 2282
NdeI	CATATG	1 cut(s)	2331
NheI	GCTAGC	1 cut(s)	5
NmuCI	GTSAC	3 cut(s)	850, 1149, 1521
NspI	RCATGY	2 cut(s)	336, 2140
PaeI	GCATGC	1 cut(s)	336
PaeR7I	CTCGAG	1 cut(s)	1834
PagI	TCATGA	2 cut(s)	1357, 2301
PceI	AGGCCT	1 cut(s)	168
PciI	ACATGT	1 cut(s)	2136
PctI	GAATGC	1 cut(s)	1785
PdmI	GAANNNNTTC	1 cut(s)	2063
PfeI	GAWTC	6 cut(s)	514, 1061, 1098, 1366, 1417, 2838
PkrI	GCNGC	5 cut(s)	145, 218, 242, 313, 923
PleI	GAGTC	2 cut(s)	552, 2806
PpsI	GAGTC	2 cut(s)	552, 2806
Ppu21I	YACGTR	1 cut(s)	2821
PpuMI	RGGWCCY	2 cut(s)	781, 1162
PscI	ACATGT	1 cut(s)	2136
Psp5II	RGGWCCY	2 cut(s)	781, 1162
Psp6I	CCWGG	4 cut(s)	654, 1728, 1967, 2940
PspEI	GGTNACC	1 cut(s)	2944
PspGI	CCWGG	4 cut(s)	654, 1728, 1967, 2940
PspOMI	GGGCCC	1 cut(s)	2569
PspPPI	RGGWCCY	2 cut(s)	781, 1162
PsrI	GAACNNNNNNTAC	2 cut(s)	2609, 2641
PstI	CTGCAG	1 cut(s)	930
PstNI	CAGNNNCTG	2 cut(s)	317, 628
PsuI	RGATCY	6 cut(s)	175, 352, 1240, 1552, 1756, 2758
RsaI	GTAC	3 cut(s)	626, 844, 2029
RsaNI	GTAC	3 cut(s)	625, 843, 2028
RseI	CAYNNNNRTG	2 cut(s)	2300, 2585
SatI	GCNGC	5 cut(s)	144, 217, 241, 312, 922
SchI	GAGTC	2 cut(s)	553, 2807
ScrFI	CCNGG	6 cut(s)	656, 1730, 1969, 1999, 2641, 2942
SduI	GDGCHC	2 cut(s)	1949, 2573
SfaNI	GCATC	6 cut(s)	986, 1275, 1622, 1725, 2222, 2767
SfcI	CTRYAG	3 cut(s)	306, 776, 926
Sfr274I	CTCGAG	1 cut(s)	1834
SinI	GGWCC	7 cut(s)	391, 781, 1121, 1162, 1706, 2073, 2717
SlaI	CTCGAG	1 cut(s)	1834
SmiMI	CAYNNNNRTG	2 cut(s)	2300, 2585
SmlI	CTYRAG	4 cut(s)	263, 446, 1834, 2704
SmoI	CTYRAG	4 cut(s)	263, 446, 1834, 2704
SnaBI	TACGTA	1 cut(s)	2821
SphI	GCATGC	1 cut(s)	336
SseBI	AGGCCT	1 cut(s)	168
SsiI	CCGC	4 cut(s)	60, 328, 342, 893
SspI	AATATT	3 cut(s)	838, 1082, 2152
StuI	AGGCCT	1 cut(s)	168
StyD4I	CCNGG	6 cut(s)	654, 1728, 1967, 1997, 2639, 2940
StyI	CCWWGG	5 cut(s)	436, 578, 1638, 2236, 2282
TaaI	ACNGT	5 cut(s)	702, 725, 856, 1480, 2013
TaiI	ACGT	2 cut(s)	2190, 2823
TaqI	TCGA	5 cut(s)	297, 1167, 1544, 1696, 1835
TatI	WGTACW	1 cut(s)	2027
TfiI	GAWTC	6 cut(s)	514, 1061, 1098, 1366, 1417, 2838
TscAI	CASTG	7 cut(s)	705, 830, 1405, 2016, 2149, 2610, 2833
TseFI	GTSAC	3 cut(s)	850, 1149, 1521
TseI	GCWGC	5 cut(s)	143, 216, 240, 311, 921
Tsp45I	GTSAC	3 cut(s)	850, 1149, 1521
TspGWI	ACGGA	1 cut(s)	943
TspRI	CASTG	7 cut(s)	705, 830, 1405, 2016, 2149, 2610, 2833
VpaK11BI	GGWCC	7 cut(s)	391, 781, 1121, 1162, 1706, 2073, 2717
XagI	CCTNNNNNAGG	2 cut(s)	507, 1972
XapI	RAATTY	9 cut(s)	155, 763, 875, 897, 1231, 1278, 1485, 1597, 1929
XceI	RCATGY	2 cut(s)	336, 2140
XcmI	CCANNNNNNNNNTGG	3 cut(s)	482, 576, 1533
XhoI	CTCGAG	1 cut(s)	1834
XmaJI	CCTAGG	1 cut(s)	436
XmiI	GTMKAC	2 cut(s)	1325, 2039
XmnI	GAANNNNTTC	1 cut(s)	2063

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.