Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

29800133 .. 29803088

Gene Structure 2956 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028886

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2280 bp

ATGGCTAGCCACAAAACTTTCATTCAACTTCTTCTTCTTCTTGTTCATTTTTTCCTTCAAGCCACAGCTTTTGCAAACTCTAGGACTGGTAATCAGAGTTTCAGTGAGGCTTGCATTGAGGAGGAGAGGAAGGCCCTCCTTGAATTCAAAAAAGGCCCTTTTCAAGGGTTTCCTTCTTGGGTTGGGGAAGACTGCTGCAACTGGTATGGCATAGCCTGCAGTAATCAAACAGGCCATGTCATCTCGGTAGACGTCTCCTTGTATGCACCCTCTGTTCCAGTTCCGAAATCAATTGGAAACCTGTCACATTTGCACATCTTAAACCTCTCAGGATATGCCTTCTCCGGTCCACTGCCAACGTCAATAGGAAACCTGCCACATTTGCAGACCTTGGTGCTCTCAGAAACTGCAATCTCTGGTCCAATTCCCAAGTCAATAGGAAACCTGCCACATTTGCAGACCTTGGTGCTCTCAGAAACTGCAATCTCTGGTTCAATTCCCAAGTCAATAGGAAACCTGTCACATTTGCAGACCTTTGTGCTCTCAGGCAATGCAATCTCTGGTCAACTTCCTACTTCTATAGGAAATATGGACCTCTCAATCAATGTAATTTCTGGTCCAATTCCGAAGTCAATAGGAAGCCTCCCACGGTTGCAGATACTTCACCTCTCACGGAATACAATCTCCGGTCCTCTTCCGATGTCAATAGGCAATTTGTCACATTTGCAGGCTCTGGACCTCACAGAAAATGCAATCTCTGGTCCACTTCCCACATCAATAGGAGATCTGGCAAATTTACGCATGTTGGCCCTTTCTGACAACTTAATCTCCGGTCCACTACCCACGTCAATAGGAAATCTGTCATGTTTACAGATCCTGGACCTTGCTGGAAACCCAAAATTGAATGGAACCATTCCAGAAAGTATTGGACAACTTAGCGAATTGACAGGGTTGTTCCTTCGGAGTGATTCACGGGATGGGATCATATCTGAAAATCATTTCCAGAACCTCACAAAATTGATACAGTTTGATTTATCATGTCCTGCATCTAACTCTGTTGTTTTCAACGTCAGTCACAACTGGATTCCTGTTTTCAATCTTTCGTCTCTCTATATCACTGATTGCAAGCTAATGAGCCCTGCATTTCCAGCATGGCTGAGAACTCAAGCATTCCTTACTCGTATAAACCTCTCAAATGTTGGAATTTCAGACACAATACCTGATTGGTTTCCGAGGATTTCACCATTCCTTGAACAGGTGGATCTTTCTAAGAACCAGTTAAGGGGAAGGCTTCCTAAATCGGTAAATTCTCTTCTAAAAGAGGTTTATTTGGATATCAACAGTTTGGAGGGTTCCCTGCCACTTTGGCCAAATGTAACGAATCTCAACTTGGCAAGCAATAGATTTTCAGGACCAATACCCTTGAACATTGGCAATCAGATGCCAATGTTGTCTAGTCTAGATCTTTCAAGGAATAATATACACGGTACTATTCCCCTTTTTGGGAATAGCACTAGTTTGGTTGCTCTTGACTTCTCAAGAAATTATTTATCAGGAAGTATTCCTATGGATTGGTCAGGTTTAACAGGCCTCAGATGTCTTGGCAAATTGGAAAGACTGACAAAAGTAAAGTTGGAAGAACTGCCAATAGGAAATGACCTGATCCATTTAAATCCTATGCATATGGACTTAAATGTCAAAGGAGTAGAATATGATTATACTGCATATCTCGTAAAACTACTAACCAAGATAGACCTATCAAGTAATAATCTATGGGGAGAAATACCGAAAGAGATGACAAATCTCATCGCCTTGGGTAGCTTGAATTTGTCACATAACCATTTGACTGGAAAGATACCAGATGGTATCGGAAGTTTACATCGGTTAGAAGCTCTTGACCTCTCTAGTAACCATCTATTCGGTCCAATTCCTTCAAGCATGACCTCCATGACTTCACTGAGCAAATTGAACTTGTCACATAACAACTTTTCTGGGCCAATTCCATCAACCAACCAGTTCCTTACCTTCAACGATCTAACCTCATTTGAAGGGAACTCAGGGCTTTGTGGGCAGCCATTGCCAACCGAATGCAGCTCATCCTCCAACAATGATGAGGATCCGGAGGTTGAAGAAGATAAGTACAACTGCCAGCAAAAGACCATACTAAACAGAATCCCAAACAGAAAAACATGCTTTGCCCTTATAATCAACGGAGAAGAAGCTCCGAATTTGGCCACAGAGTCGCTCCCAAAAGGTGATTTTCTGTTGATAGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

760

Amino Acids

82.33

Weight (kDa)

5.85

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	40 - 74	1.4e-06	Leucine rich repeat N-terminal domain
LRR_14	PF23598	96 - 158	1.3e-09	Leucine-rich repeat region
LRR_8	PF13855	126 - 186	1.4e-07	Leucine rich repeat
LRR_14	PF23598	144 - 197	1.6e-07	Leucine-rich repeat region
LRR_14	PF23598	210 - 391	2.3e-21	Leucine-rich repeat region
LRR_8	PF13855	216 - 276	6e-09	Leucine rich repeat
LRR_8	PF13855	581 - 639	2e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2204
AasI	GACNNNNNNGTC	1 cut(s)	1694
AatII	GACGTC	1 cut(s)	255
Acc36I	ACCTGC	2 cut(s)	381, 453
AccI	GTMKAC	1 cut(s)	249
AccIII	TCCGGA	1 cut(s)	2119
AclWI	GGATC	6 cut(s)	868, 989, 1269, 1657, 2111, 2124
AcoI	YGGCCR	2 cut(s)	1367, 2232
AcsI	RAATTY	6 cut(s)	143, 793, 1203, 1306, 1825, 2227
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	2 cut(s)	1489, 2141
AfiI	CCNNNNNNNGG	5 cut(s)	164, 1255, 1282, 1502, 1503
AhlI	ACTAGT	1 cut(s)	1514
AjiI	CACGTC	1 cut(s)	846
AjnI	CCWGG	1 cut(s)	876
AjuI	GAANNNNNNNTTGG	2 cut(s)	1373, 1405
AluBI	AGCT	6 cut(s)	68, 1129, 1821, 1892, 2094, 2222
AluI	AGCT	6 cut(s)	68, 1129, 1821, 1892, 2094, 2222
Alw21I	GWGCWC	3 cut(s)	399, 471, 543
Alw26I	GTCTC	2 cut(s)	259, 1110
AlwI	GGATC	6 cut(s)	868, 989, 1269, 1657, 2111, 2124
AlwNI	CAGNNNCTG	4 cut(s)	407, 479, 733, 877
Aor13HI	TCCGGA	1 cut(s)	2119
AoxI	GGCC	8 cut(s)	132, 154, 232, 807, 1367, 1588, 1994, 2232
ApeKI	GCWGC	3 cut(s)	195, 2071, 2091
ApoI	RAATTY	6 cut(s)	143, 793, 1203, 1306, 1825, 2227
AsuHPI	GGTGA	3 cut(s)	656, 1233, 2267
AsuNHI	GCTAGC	1 cut(s)	5
BalI	TGGCCA	2 cut(s)	1369, 2234
BamHI	GGATCC	1 cut(s)	2116
BanII	GRGCYC	1 cut(s)	1139
BarI	GAAGNNNNNNTAC	2 cut(s)	1296, 1328
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	3 cut(s)	399, 471, 543
BbvI	GCAGC	3 cut(s)	182, 2083, 2103
BccI	CCATC	4 cut(s)	971, 1856, 1920, 2011
BciT130I	CCWGG	1 cut(s)	878
BcoDI	GTCTC	2 cut(s)	259, 1110
BcuI	ACTAGT	1 cut(s)	1514
BfaI	CTAG	6 cut(s)	6, 81, 1455, 1460, 1515, 1905
BfmI	CTRYAG	2 cut(s)	217, 579
BfuAI	ACCTGC	2 cut(s)	381, 453
BglI	GCCNNNNNGGC	1 cut(s)	1366
BglII	AGATCT	2 cut(s)	784, 1462
BisI	GCNGC	3 cut(s)	196, 2072, 2092
BlsI	GCNGC	3 cut(s)	197, 2073, 2093
Bme1390I	CCNGG	1 cut(s)	878
BmgBI	CACGTC	1 cut(s)	846
BmiI	GGNNCC	3 cut(s)	910, 1354, 2118
BmrFI	CCNGG	1 cut(s)	878
BmsI	GCATC	2 cut(s)	1055, 1431
BmtI	GCTAGC	1 cut(s)	9
BpiI	GAAGAC	1 cut(s)	195
BpuEI	CTTGAG	2 cut(s)	1149, 1522
BsaBI	GATNNNNATC	1 cut(s)	2115
BsaHI	GRCGYC	1 cut(s)	252
BsaJI	CCNNGG	5 cut(s)	390, 462, 647, 1232, 1812
BsaWI	WCCGGW	4 cut(s)	344, 686, 830, 2119
BsaXI	ACNNNNNCTCC	2 cut(s)	812, 842
Bsc4I	CCNNNNNNNGG	5 cut(s)	164, 1255, 1282, 1502, 1503
Bse1I	ACTGG	7 cut(s)	91, 206, 278, 1085, 1276, 1852, 2014
Bse3DI	GCAATG	2 cut(s)	556, 2075
Bse8I	GATNNNNATC	1 cut(s)	2115
BseAI	TCCGGA	1 cut(s)	2119
BseBI	CCWGG	1 cut(s)	878
BseDI	CCNNGG	5 cut(s)	390, 462, 647, 1232, 1812
BseGI	GGATG	2 cut(s)	982, 2096
BseJI	GATNNNNATC	1 cut(s)	2115
BseLI	CCNNNNNNNGG	5 cut(s)	164, 1255, 1282, 1502, 1503
BseMI	GCAATG	2 cut(s)	556, 2075
BseMII	CTCAG	8 cut(s)	342, 414, 486, 558, 1148, 1606, 1949, 2070
BseNI	ACTGG	7 cut(s)	91, 206, 278, 1085, 1276, 1852, 2014
BseRI	GAGGAG	2 cut(s)	134, 137
BseXI	GCAGC	3 cut(s)	182, 2083, 2103
BshFI	GGCC	8 cut(s)	134, 156, 234, 809, 1369, 1590, 1996, 2234
BsiHKAI	GWGCWC	3 cut(s)	399, 471, 543
BsiSI	CCGG	4 cut(s)	345, 687, 831, 2120
BslI	CCNNNNNNNGG	5 cut(s)	164, 1255, 1282, 1502, 1503
BsmAI	GTCTC	2 cut(s)	259, 1110
BsmBI	CGTCTC	2 cut(s)	259, 1110
BsmI	GAATGC	2 cut(s)	1169, 2093
BsnI	GGCC	8 cut(s)	134, 156, 234, 809, 1369, 1590, 1996, 2234
Bsp1286I	GDGCHC	4 cut(s)	399, 471, 543, 1139
Bsp13I	TCCGGA	1 cut(s)	2119
Bsp143I	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
BspANI	GGCC	8 cut(s)	134, 156, 234, 809, 1369, 1590, 1996, 2234
BspCNI	CTCAG	8 cut(s)	341, 413, 485, 557, 1149, 1605, 1950, 2069
BspEI	TCCGGA	1 cut(s)	2119
BspLI	GGNNCC	3 cut(s)	910, 1354, 2118
BspMAI	CTGCAG	1 cut(s)	221
BspMI	ACCTGC	2 cut(s)	381, 453
BspOI	GCTAGC	1 cut(s)	9
BspPI	GGATC	6 cut(s)	868, 989, 1269, 1657, 2111, 2124
BsrDI	GCAATG	2 cut(s)	556, 2075
BsrI	ACTGG	7 cut(s)	91, 206, 278, 1085, 1276, 1852, 2014
BssECI	CCNNGG	5 cut(s)	390, 462, 647, 1232, 1812
BssMI	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
BssNI	GRCGYC	1 cut(s)	252
BssT1I	CCWWGG	3 cut(s)	390, 462, 1812
Bst2UI	CCWGG	1 cut(s)	878
Bst4CI	ACNGT	4 cut(s)	651, 1026, 1343, 1487
Bst6I	CTCTTC	2 cut(s)	699, 1317
BstACI	GRCGYC	1 cut(s)	252
BstAPI	GCANNNNNTGC	2 cut(s)	216, 2077
BstC8I	GCNNGC	7 cut(s)	7, 112, 217, 729, 1127, 1396, 2150
BstDSI	CCRYGG	1 cut(s)	647
BstENI	CCTNNNNNAGG	2 cut(s)	162, 1253
BstF5I	GGATG	2 cut(s)	982, 2096
BstKTI	GATC	8 cut(s)	787, 876, 984, 1264, 1465, 1665, 2035, 2119
BstMAI	GTCTC	2 cut(s)	259, 1110
BstMBI	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
BstMWI	GCNNNNNNNGC	7 cut(s)	216, 382, 454, 1148, 1366, 2068, 2077
BstNI	CCWGG	1 cut(s)	878
BstNSI	RCATGY	2 cut(s)	805, 2193
BstSCI	CCNGG	1 cut(s)	876
BstSFI	CTRYAG	2 cut(s)	217, 579
BstV1I	GCAGC	3 cut(s)	182, 2083, 2103
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	5 cut(s)	784, 873, 1261, 1462, 2116
BstXI	CCANNNNNNTGG	1 cut(s)	1847
BstYI	RGATCY	5 cut(s)	784, 873, 1261, 1462, 2116
BsuRI	GGCC	8 cut(s)	134, 156, 234, 809, 1369, 1590, 1996, 2234
BtgI	CCRYGG	1 cut(s)	647
BtgZI	GCGATG	1 cut(s)	1792
BtrI	CACGTC	1 cut(s)	846
BtsCI	GGATG	2 cut(s)	982, 2096
BtsI	GCAGTG	1 cut(s)	350
BtsIMutI	CAGTG	4 cut(s)	109, 350, 1116, 1955
BveI	ACCTGC	2 cut(s)	381, 453
Cac8I	GCNNGC	7 cut(s)	7, 112, 217, 729, 1127, 1396, 2150
CaiI	CAGNNNCTG	4 cut(s)	407, 479, 733, 877
Csp6I	GTAC	2 cut(s)	1488, 2140
CspCI	CAANNNNNGTGG	2 cut(s)	52, 87
CviAII	CATG	8 cut(s)	236, 802, 864, 1038, 1152, 1939, 1948, 2190
CviQI	GTAC	2 cut(s)	1488, 2140
DpnI	GATC	8 cut(s)	786, 875, 983, 1263, 1464, 1664, 2034, 2118
DpnII	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
DraI	TTTAAA	1 cut(s)	1671
DrdI	GACNNNNNNGTC	1 cut(s)	1694
DseDI	GACNNNNNNGTC	1 cut(s)	1694
EaeI	YGGCCR	2 cut(s)	1367, 2232
Eam1104I	CTCTTC	2 cut(s)	699, 1317
EarI	CTCTTC	2 cut(s)	699, 1317
Eco130I	CCWWGG	3 cut(s)	390, 462, 1812
Eco147I	AGGCCT	1 cut(s)	1590
Eco24I	GRGCYC	1 cut(s)	1139
Eco32I	GATATC	1 cut(s)	1336
EcoNI	CCTNNNNNAGG	2 cut(s)	162, 1253
EcoO109I	RGGNCCY	2 cut(s)	133, 155
EcoRI	GAATTC	1 cut(s)	143
EcoRII	CCWGG	1 cut(s)	876
EcoRV	GATATC	1 cut(s)	1336
EcoT14I	CCWWGG	3 cut(s)	390, 462, 1812
EcoT22I	ATGCAT	1 cut(s)	1683
EcoT38I	GRGCYC	1 cut(s)	1139
ErhI	CCWWGG	3 cut(s)	390, 462, 1812
Esp3I	CGTCTC	2 cut(s)	259, 1110
FaeI	CATG	8 cut(s)	239, 805, 867, 1041, 1155, 1942, 1951, 2193
FalI	AAGNNNNNCTT	2 cut(s)	1158, 1190
FatI	CATG	8 cut(s)	235, 801, 863, 1037, 1151, 1938, 1947, 2189
FauNDI	CATATG	1 cut(s)	1683
FblI	GTMKAC	1 cut(s)	249
Fnu4HI	GCNGC	3 cut(s)	196, 2072, 2092
FokI	GGATG	2 cut(s)	989, 2083
FriOI	GRGCYC	1 cut(s)	1139
Fsp4HI	GCNGC	3 cut(s)	196, 2072, 2092
FspBI	CTAG	6 cut(s)	6, 81, 1455, 1460, 1515, 1905
GluI	GCNGC	3 cut(s)	196, 2072, 2092
HaeIII	GGCC	8 cut(s)	134, 156, 234, 809, 1369, 1590, 1996, 2234
HapII	CCGG	4 cut(s)	345, 687, 831, 2120
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	8 cut(s)	239, 805, 867, 1041, 1155, 1942, 1951, 2193
HincII	GTYRAC	1 cut(s)	566
HindII	GTYRAC	1 cut(s)	566
HinfI	GANTC	5 cut(s)	968, 1084, 1381, 2172, 2240
HpaII	CCGG	4 cut(s)	345, 687, 831, 2120
HphI	GGTGA	3 cut(s)	656, 1233, 2267
Hpy166II	GTNNAC	7 cut(s)	250, 350, 566, 764, 836, 869, 1877
Hpy8I	GTNNAC	7 cut(s)	250, 350, 566, 764, 836, 869, 1877
HpyAV	CCTTC	9 cut(s)	65, 124, 183, 349, 968, 1281, 1941, 2035, 2042
HpyCH4III	ACNGT	4 cut(s)	651, 1026, 1343, 1487
HpyCH4IV	ACGT	4 cut(s)	252, 359, 845, 1068
HpyF10VI	GCNNNNNNNGC	7 cut(s)	216, 382, 454, 1148, 1366, 2068, 2077
HpySE526I	ACGT	4 cut(s)	252, 359, 845, 1068
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	8 cut(s)	239, 805, 867, 1041, 1155, 1942, 1951, 2193
Kpn2I	TCCGGA	1 cut(s)	2119
Kzo9I	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
LmnI	GCTCC	2 cut(s)	2227, 2250
Lsp1109I	GCAGC	3 cut(s)	182, 2083, 2103
LweI	GCATC	2 cut(s)	1055, 1431
MaeI	CTAG	6 cut(s)	6, 81, 1455, 1460, 1515, 1905
MaeII	ACGT	4 cut(s)	252, 359, 845, 1068
MaeIII	GTNAC	8 cut(s)	303, 519, 717, 1073, 1375, 1830, 1907, 1974
MalI	GATC	8 cut(s)	786, 875, 983, 1263, 1464, 1664, 2034, 2118
MboI	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
MfeI	CAATTG	1 cut(s)	291
MflI	RGATCY	5 cut(s)	784, 873, 1261, 1462, 2116
MhlI	GDGCHC	4 cut(s)	399, 471, 543, 1139
MlsI	TGGCCA	2 cut(s)	1369, 2234
MluNI	TGGCCA	2 cut(s)	1369, 2234
MlyI	GAGTC	1 cut(s)	2249
MmeI	TCCRAC	3 cut(s)	1180, 1614, 2127
Mox20I	TGGCCA	2 cut(s)	1369, 2234
Mph1103I	ATGCAT	1 cut(s)	1683
MroI	TCCGGA	1 cut(s)	2119
MscI	TGGCCA	2 cut(s)	1369, 2234
MseI	TTAA	6 cut(s)	320, 824, 1280, 1583, 1670, 1691
Msp20I	TGGCCA	2 cut(s)	1369, 2234
MspI	CCGG	4 cut(s)	345, 687, 831, 2120
MspR9I	CCNGG	1 cut(s)	878
MunI	CAATTG	1 cut(s)	291
Mva1269I	GAATGC	2 cut(s)	1169, 2093
MvaI	CCWGG	1 cut(s)	878
MwoI	GCNNNNNNNGC	7 cut(s)	216, 382, 454, 1148, 1366, 2068, 2077
NdeI	CATATG	1 cut(s)	1683
NdeII	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
NheI	GCTAGC	1 cut(s)	5
NlaIII	CATG	8 cut(s)	239, 805, 867, 1041, 1155, 1942, 1951, 2193
NlaIV	GGNNCC	3 cut(s)	910, 1354, 2118
NmuCI	GTSAC	6 cut(s)	303, 519, 717, 1073, 1830, 1974
NsiI	ATGCAT	1 cut(s)	1683
NspI	RCATGY	2 cut(s)	805, 2193
PceI	AGGCCT	1 cut(s)	1590
PctI	GAATGC	2 cut(s)	1169, 2093
PfeI	GAWTC	4 cut(s)	968, 1084, 1381, 2172
PfoI	TCCNGGA	1 cut(s)	876
PkrI	GCNGC	3 cut(s)	197, 2073, 2093
PleI	GAGTC	1 cut(s)	2248
PpsI	GAGTC	1 cut(s)	2248
PsiI	TTATAA	1 cut(s)	2204
Psp6I	CCWGG	1 cut(s)	876
PspGI	CCWGG	1 cut(s)	876
PspN4I	GGNNCC	3 cut(s)	910, 1354, 2118
PstI	CTGCAG	1 cut(s)	221
PstNI	CAGNNNCTG	4 cut(s)	407, 479, 733, 877
PsuI	RGATCY	5 cut(s)	784, 873, 1261, 1462, 2116
RsaI	GTAC	2 cut(s)	1489, 2141
RsaNI	GTAC	2 cut(s)	1488, 2140
SaqAI	TTAA	6 cut(s)	320, 824, 1280, 1583, 1670, 1691
SatI	GCNGC	3 cut(s)	196, 2072, 2092
Sau3AI	GATC	8 cut(s)	784, 873, 981, 1261, 1462, 1662, 2032, 2116
SchI	GAGTC	1 cut(s)	2249
ScrFI	CCNGG	1 cut(s)	878
SduI	GDGCHC	4 cut(s)	399, 471, 543, 1139
SfaNI	GCATC	2 cut(s)	1055, 1431
SfcI	CTRYAG	2 cut(s)	217, 579
SmiI	ATTTAAAT	1 cut(s)	1671
SmlI	CTYRAG	2 cut(s)	1164, 1537
SmoI	CTYRAG	2 cut(s)	1164, 1537
SpeI	ACTAGT	1 cut(s)	1514
SseBI	AGGCCT	1 cut(s)	1590
SspMI	CTAG	6 cut(s)	6, 81, 1455, 1460, 1515, 1905
StuI	AGGCCT	1 cut(s)	1590
StyD4I	CCNGG	1 cut(s)	876
StyI	CCWWGG	3 cut(s)	390, 462, 1812
SwaI	ATTTAAAT	1 cut(s)	1671
TaaI	ACNGT	4 cut(s)	651, 1026, 1343, 1487
TaiI	ACGT	4 cut(s)	255, 362, 848, 1071
TaqII	GACCGA	1 cut(s)	1910
TatI	WGTACW	1 cut(s)	2139
TfiI	GAWTC	4 cut(s)	968, 1084, 1381, 2172
Tru1I	TTAA	6 cut(s)	320, 824, 1280, 1583, 1670, 1691
Tru9I	TTAA	6 cut(s)	320, 824, 1280, 1583, 1670, 1691
TscAI	CASTG	4 cut(s)	109, 357, 1123, 1962
TseFI	GTSAC	6 cut(s)	303, 519, 717, 1073, 1830, 1974
TseI	GCWGC	3 cut(s)	195, 2071, 2091
Tsp45I	GTSAC	6 cut(s)	303, 519, 717, 1073, 1830, 1974
TspDTI	ATGAA	2 cut(s)	10, 35
TspGWI	ACGGA	2 cut(s)	688, 2226
TspRI	CASTG	4 cut(s)	109, 357, 1123, 1962
XagI	CCTNNNNNAGG	2 cut(s)	162, 1253
XapI	RAATTY	6 cut(s)	143, 793, 1203, 1306, 1825, 2227
XbaI	TCTAGA	1 cut(s)	1459
XceI	RCATGY	2 cut(s)	805, 2193
XmiI	GTMKAC	1 cut(s)	249
XspI	CTAG	6 cut(s)	6, 81, 1455, 1460, 1515, 1905
ZraI	GACGTC	1 cut(s)	253
Zsp2I	ATGCAT	1 cut(s)	1683

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.