Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Forward (+)

8805235 .. 8806586

Gene Structure 1352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0109700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGGCGATTCCTACTTCTCTTAAACTTACTACTACTTCAGGCTTTCTTCAACTGAATACGAAGAAACCTCGATACCCAGTTCATCATCTTCCTTCTCCATCCCAAACAGCATTAACCTTTCCAATCAAGAAACTACTTGAGCTAAATCCAAGGGATACTCTCACCCTCCCTCGTGCCCCTACCGATAGCATCTCACAAACTTTCACAAAATTGAAATCACAAGGGAAAGTAGCATTCATCCCCTACATCACCGCCGGTGATCCAGATCTCTCAACAACCATTCAAGCGTTGAAGGTGCTCGATTCTTGTGGATCCGATGTAATTGAACTAGGCATACCCTACTCCGATCCCTCACTAGACGGTCCGGTCATACGCGCTTCAGCGTCACGGTCCTTGGCAGGAGGGACAAAGTTCAAAAATATCATCTCAATGTTAGAAGATGTTGTTCCCCAACTGTCGTGCCCTATCACTCTATTCTCCTACTATAACCCTATTATCAAGCATGGCATCGAAAACTTCATGTCCATCATTAGCCAAGCCGGCGTCCGTGGGCTTGTGGTTCCGGATGTCCCTTTTGAAAACACACAACGCTTGAGAAATGAAGCGGCGAAGAACAACGTTGAGCTGGTGCTGCTAACCACACCCACTACTACAACATGTCGAATGAAAGACATTGTCCGAGCCTCGGAGGGTTTCGTGTACCTGGTGAGTGCGGTGGGGGTCACCGGGGCTCGTCCACGTGTGAACGAACAAGTTCCGAGTCTCTTGAGGGAGATTAAGGAGGCGACGAACAAGGCAGTGGCTGTTGGGTTCGGATTGTCGAAGCCTGAGCATGTGAAGCAGGTGGCCGAGTGGGGGGCAGATGGTGCTATTGTTGGTAGTGCCATTGTGAAGGTATTGGGTGAAGCTAGATCTCCATTGCAAGGGTTGAGAGACCTTGAAGCTTTCGCCAAATCTTTCAAGGCTGCTCTCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

325

Amino Acids

35.02

Weight (kDa)

9.35

Isoelectric Point (pI)

32.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Trp_syntA	PF00290	68 - 323	2.4e-89	Tryptophan synthase alpha chain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	832
AasI	GACNNNNNNGTC	1 cut(s)	365
Acc36I	ACCTGC	1 cut(s)	832
AccII	CGCG	1 cut(s)	375
AccIII	TCCGGA	1 cut(s)	562
AciI	CCGC	3 cut(s)	252, 605, 713
AclI	AACGTT	1 cut(s)	618
AclWI	GGATC	4 cut(s)	254, 306, 319, 341
AcoI	YGGCCR	1 cut(s)	846
AcuI	CTGAAG	2 cut(s)	21, 363
AcvI	CACGTG	1 cut(s)	740
AcyI	GRCGYC	1 cut(s)	543
AfaI	GTAC	1 cut(s)	701
AfiI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
AflIII	ACRYGT	2 cut(s)	656, 739
AgsI	TTSAA	9 cut(s)	50, 214, 284, 292, 326, 415, 578, 941, 961
AjnI	CCWGG	1 cut(s)	702
AluBI	AGCT	4 cut(s)	142, 625, 908, 944
AluI	AGCT	4 cut(s)	142, 625, 908, 944
Alw21I	GWGCWC	1 cut(s)	300
Alw26I	GTCTC	2 cut(s)	767, 927
AlwI	GGATC	4 cut(s)	254, 306, 319, 341
AlwNI	CAGNNNCTG	1 cut(s)	803
Aor13HI	TCCGGA	1 cut(s)	562
AoxI	GGCC	1 cut(s)	846
ApeKI	GCWGC	2 cut(s)	631, 965
Asp700I	GAANNNNTTC	1 cut(s)	753
AspLEI	GCGC	1 cut(s)	377
AspS9I	GGNCC	2 cut(s)	362, 390
AsuC2I	CCSGG	1 cut(s)	727
AsuHPI	GGTGA	6 cut(s)	154, 241, 269, 715, 718, 914
AvaII	GGWCC	2 cut(s)	362, 390
BaeGI	GKGCMC	2 cut(s)	178, 464
BamHI	GGATCC	1 cut(s)	311
BanII	GRGCYC	1 cut(s)	733
BauI	CACGAG	1 cut(s)	171
BbrPI	CACGTG	1 cut(s)	740
Bbv12I	GWGCWC	1 cut(s)	300
BbvI	GCAGC	2 cut(s)	618, 952
BccI	CCATC	3 cut(s)	106, 533, 857
BciT130I	CCWGG	1 cut(s)	704
BciVI	GTATCC	1 cut(s)	148
BcnI	CCSGG	1 cut(s)	727
BcoDI	GTCTC	2 cut(s)	767, 927
BfaI	CTAG	3 cut(s)	329, 356, 909
BfuAI	ACCTGC	1 cut(s)	832
BfuI	GTATCC	1 cut(s)	148
BglI	GCCNNNNNGGC	1 cut(s)	540
BglII	AGATCT	2 cut(s)	265, 911
BisI	GCNGC	3 cut(s)	606, 632, 966
BlsI	GCNGC	3 cut(s)	607, 633, 967
Bme1390I	CCNGG	2 cut(s)	704, 727
Bme18I	GGWCC	2 cut(s)	362, 390
BmgT120I	GGNCC	2 cut(s)	362, 390
BmiI	GGNNCC	2 cut(s)	313, 561
BmrFI	CCNGG	2 cut(s)	704, 727
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	2 cut(s)	198, 516
BmuI	ACTGGG	1 cut(s)	71
Bpu10I	CCTNAGC	1 cut(s)	828
BpuEI	CTTGAG	3 cut(s)	158, 613, 787
BpuMI	CCSGG	1 cut(s)	727
BsaAI	YACGTR	1 cut(s)	740
BsaBI	GATNNNNATC	1 cut(s)	264
BsaHI	GRCGYC	1 cut(s)	543
BsaI	GGTCTC	1 cut(s)	927
BsaJI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BsaWI	WCCGGW	2 cut(s)	364, 562
Bsc4I	CCNNNNNNNGG	3 cut(s)	685, 855, 923
Bse118I	RCCGGY	2 cut(s)	254, 539
Bse1I	ACTGG	1 cut(s)	77
Bse3DI	GCAATG	1 cut(s)	917
Bse8I	GATNNNNATC	1 cut(s)	264
BseAI	TCCGGA	1 cut(s)	562
BseBI	CCWGG	1 cut(s)	704
BseDI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BseGI	GGATG	3 cut(s)	98, 237, 571
BseJI	GATNNNNATC	1 cut(s)	264
BseLI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
BseMI	GCAATG	1 cut(s)	917
BseMII	CTCAG	1 cut(s)	819
BseNI	ACTGG	1 cut(s)	77
BseSI	GKGCMC	2 cut(s)	178, 464
BseXI	GCAGC	2 cut(s)	618, 952
Bsh1236I	CGCG	1 cut(s)	375
BshFI	GGCC	1 cut(s)	848
BsiHKAI	GWGCWC	1 cut(s)	300
BsiSI	CCGG	5 cut(s)	255, 365, 540, 563, 726
BslFI	GGGAC	2 cut(s)	418, 554
BslI	CCNNNNNNNGG	3 cut(s)	685, 855, 923
BsmAI	GTCTC	2 cut(s)	767, 927
BsmFI	GGGAC	2 cut(s)	418, 554
BsmI	GAATGC	1 cut(s)	233
BsnI	GGCC	1 cut(s)	848
Bso31I	GGTCTC	1 cut(s)	927
Bsp1286I	GDGCHC	4 cut(s)	178, 300, 464, 733
Bsp13I	TCCGGA	1 cut(s)	562
Bsp143I	GATC	5 cut(s)	259, 265, 311, 346, 911
BspACI	CCGC	3 cut(s)	252, 605, 713
BspANI	GGCC	1 cut(s)	848
BspCNI	CTCAG	1 cut(s)	820
BspEI	TCCGGA	1 cut(s)	562
BspFNI	CGCG	1 cut(s)	375
BspLI	GGNNCC	2 cut(s)	313, 561
BspMI	ACCTGC	1 cut(s)	832
BspPI	GGATC	4 cut(s)	254, 306, 319, 341
BspTNI	GGTCTC	1 cut(s)	927
BsrDI	GCAATG	1 cut(s)	917
BsrFI	RCCGGY	2 cut(s)	254, 539
BsrI	ACTGG	1 cut(s)	77
BssAI	RCCGGY	2 cut(s)	254, 539
BssECI	CCNNGG	5 cut(s)	149, 393, 547, 684, 726
BssMI	GATC	5 cut(s)	259, 265, 311, 346, 911
BssNI	GRCGYC	1 cut(s)	543
BssSI	CACGAG	1 cut(s)	171
BssT1I	CCWWGG	2 cut(s)	149, 393
Bst2BI	CACGAG	1 cut(s)	171
Bst2UI	CCWGG	1 cut(s)	704
Bst4CI	ACNGT	3 cut(s)	362, 390, 456
BstACI	GRCGYC	1 cut(s)	543
BstAPI	GCANNNNNTGC	1 cut(s)	866
BstBAI	YACGTR	1 cut(s)	740
BstC8I	GCNNGC	1 cut(s)	541
BstDEI	CTNAG	1 cut(s)	828
BstDSI	CCRYGG	1 cut(s)	547
BstEII	GGTNACC	1 cut(s)	721
BstF5I	GGATG	3 cut(s)	98, 237, 571
BstFNI	CGCG	1 cut(s)	375
BstHHI	GCGC	1 cut(s)	377
BstKTI	GATC	5 cut(s)	262, 268, 314, 349, 914
BstMAI	GTCTC	2 cut(s)	767, 927
BstMBI	GATC	5 cut(s)	259, 265, 311, 346, 911
BstMWI	GCNNNNNNNGC	4 cut(s)	540, 631, 838, 866
BstNI	CCWGG	1 cut(s)	704
BstNSI	RCATGY	2 cut(s)	660, 836
BstPI	GGTNACC	1 cut(s)	721
BstSCI	CCNGG	2 cut(s)	702, 725
BstSLI	GKGCMC	2 cut(s)	178, 464
BstUI	CGCG	1 cut(s)	375
BstV1I	GCAGC	2 cut(s)	618, 952
BstX2I	RGATCY	3 cut(s)	265, 311, 911
BstYI	RGATCY	3 cut(s)	265, 311, 911
BsuI	GTATCC	1 cut(s)	148
BsuRI	GGCC	1 cut(s)	848
BtgI	CCRYGG	1 cut(s)	547
BtsCI	GGATG	3 cut(s)	98, 237, 571
BtsI	GCAGTG	1 cut(s)	804
BtsIMutI	CAGTG	1 cut(s)	804
BveI	ACCTGC	1 cut(s)	832
Cac8I	GCNNGC	1 cut(s)	541
CaiI	CAGNNNCTG	1 cut(s)	803
CfoI	GCGC	1 cut(s)	377
Cfr10I	RCCGGY	2 cut(s)	254, 539
Cfr13I	GGNCC	2 cut(s)	362, 390
CpoI	CGGWCCG	1 cut(s)	362
CseI	GACGC	2 cut(s)	372, 532
CsiI	ACCWGGT	1 cut(s)	702
Csp6I	GTAC	1 cut(s)	700
CspI	CGGWCCG	1 cut(s)	362
CviAII	CATG	4 cut(s)	503, 520, 657, 833
CviQI	GTAC	1 cut(s)	700
DdeI	CTNAG	1 cut(s)	828
DpnI	GATC	5 cut(s)	261, 267, 313, 348, 913
DpnII	GATC	5 cut(s)	259, 265, 311, 346, 911
DrdI	GACNNNNNNGTC	1 cut(s)	365
DseDI	GACNNNNNNGTC	1 cut(s)	365
EaeI	YGGCCR	1 cut(s)	846
Eco130I	CCWWGG	2 cut(s)	149, 393
Eco24I	GRGCYC	1 cut(s)	733
Eco31I	GGTCTC	1 cut(s)	927
Eco47I	GGWCC	2 cut(s)	362, 390
Eco57I	CTGAAG	2 cut(s)	21, 363
Eco72I	CACGTG	1 cut(s)	740
Eco91I	GGTNACC	1 cut(s)	721
EcoO65I	GGTNACC	1 cut(s)	721
EcoRII	CCWGG	1 cut(s)	702
EcoT14I	CCWWGG	2 cut(s)	149, 393
EcoT38I	GRGCYC	1 cut(s)	733
ErhI	CCWWGG	2 cut(s)	149, 393
FaeI	CATG	4 cut(s)	506, 523, 660, 836
FaiI	YATR	7 cut(s)	335, 371, 486, 504, 521, 658, 834
FaqI	GGGAC	2 cut(s)	418, 554
FatI	CATG	4 cut(s)	502, 519, 656, 832
Fnu4HI	GCNGC	3 cut(s)	606, 632, 966
FokI	GGATG	3 cut(s)	85, 224, 578
FriOI	GRGCYC	1 cut(s)	733
Fsp4HI	GCNGC	3 cut(s)	606, 632, 966
FspBI	CTAG	3 cut(s)	329, 356, 909
GlaI	GCGC	1 cut(s)	376
GluI	GCNGC	3 cut(s)	606, 632, 966
HaeIII	GGCC	1 cut(s)	848
HapII	CCGG	5 cut(s)	255, 365, 540, 563, 726
HgaI	GACGC	2 cut(s)	372, 532
HhaI	GCGC	1 cut(s)	377
Hin1I	GRCGYC	1 cut(s)	543
Hin1II	CATG	4 cut(s)	506, 523, 660, 836
Hin6I	GCGC	1 cut(s)	375
HinP1I	GCGC	1 cut(s)	375
HindIII	AAGCTT	1 cut(s)	942
HinfI	GANTC	3 cut(s)	7, 302, 760
HpaII	CCGG	5 cut(s)	255, 365, 540, 563, 726
HphI	GGTGA	6 cut(s)	154, 241, 269, 715, 718, 914
Hpy166II	GTNNAC	3 cut(s)	700, 737, 745
Hpy188I	TCNGA	6 cut(s)	316, 346, 680, 688, 759, 815
Hpy188III	TCNNGA	4 cut(s)	127, 263, 563, 766
Hpy8I	GTNNAC	3 cut(s)	700, 737, 745
Hpy99I	CGWCG	1 cut(s)	790
HpyAV	CCTTC	3 cut(s)	102, 286, 886
HpyCH4III	ACNGT	3 cut(s)	362, 390, 456
HpyCH4IV	ACGT	2 cut(s)	618, 739
HpyCH4V	TGCA	1 cut(s)	922
HpyF10VI	GCNNNNNNNGC	4 cut(s)	540, 631, 838, 866
HpyF3I	CTNAG	1 cut(s)	828
HpySE526I	ACGT	2 cut(s)	618, 739
Hsp92I	GRCGYC	1 cut(s)	543
Hsp92II	CATG	4 cut(s)	506, 523, 660, 836
HspAI	GCGC	1 cut(s)	375
Kpn2I	TCCGGA	1 cut(s)	562
KroI	GCCGGC	1 cut(s)	539
KroNI	GCCGGC	1 cut(s)	541
Kzo9I	GATC	5 cut(s)	259, 265, 311, 346, 911
Lsp1109I	GCAGC	2 cut(s)	618, 952
LweI	GCATC	2 cut(s)	198, 516
MabI	ACCWGGT	1 cut(s)	702
MaeI	CTAG	3 cut(s)	329, 356, 909
MaeII	ACGT	2 cut(s)	618, 739
MaeIII	GTNAC	2 cut(s)	384, 721
MalI	GATC	5 cut(s)	261, 267, 313, 348, 913
MboI	GATC	5 cut(s)	259, 265, 311, 346, 911
MboII	GAAGA	5 cut(s)	38, 73, 80, 449, 622
MflI	RGATCY	3 cut(s)	265, 311, 911
MhlI	GDGCHC	4 cut(s)	178, 300, 464, 733
MluCI	AATT	2 cut(s)	209, 321
MlyI	GAGTC	1 cut(s)	769
MnlI	CCTC	9 cut(s)	78, 176, 180, 361, 395, 682, 694, 762, 775
MroI	TCCGGA	1 cut(s)	562
MroNI	GCCGGC	1 cut(s)	539
MroXI	GAANNNNTTC	1 cut(s)	753
MseI	TTAA	3 cut(s)	21, 113, 777
MslI	CAYNNNNRTG	1 cut(s)	428
MspI	CCGG	5 cut(s)	255, 365, 540, 563, 726
MspR9I	CCNGG	2 cut(s)	704, 727
Mva1269I	GAATGC	1 cut(s)	233
MvaI	CCWGG	1 cut(s)	704
MvnI	CGCG	1 cut(s)	375
MwoI	GCNNNNNNNGC	4 cut(s)	540, 631, 838, 866
NaeI	GCCGGC	1 cut(s)	541
NciI	CCSGG	1 cut(s)	727
NdeII	GATC	5 cut(s)	259, 265, 311, 346, 911
NgoMIV	GCCGGC	1 cut(s)	539
NlaIII	CATG	4 cut(s)	506, 523, 660, 836
NlaIV	GGNNCC	2 cut(s)	313, 561
NmeAIII	GCCGAG	1 cut(s)	874
NmuCI	GTSAC	2 cut(s)	384, 721
NspI	RCATGY	2 cut(s)	660, 836
PaqCI	CACCTGC	1 cut(s)	832
PciI	ACATGT	1 cut(s)	656
PctI	GAATGC	1 cut(s)	233
PdiI	GCCGGC	1 cut(s)	541
PdmI	GAANNNNTTC	1 cut(s)	753
PfeI	GAWTC	2 cut(s)	7, 302
PflFI	GACNNNGTC	1 cut(s)	674
PkrI	GCNGC	3 cut(s)	607, 633, 967
PleI	GAGTC	1 cut(s)	768
PmaCI	CACGTG	1 cut(s)	740
PmlI	CACGTG	1 cut(s)	740
PpsI	GAGTC	1 cut(s)	768
Ppu21I	YACGTR	1 cut(s)	740
PscI	ACATGT	1 cut(s)	656
Psp1406I	AACGTT	1 cut(s)	618
Psp6I	CCWGG	1 cut(s)	702
PspCI	CACGTG	1 cut(s)	740
PspEI	GGTNACC	1 cut(s)	721
PspGI	CCWGG	1 cut(s)	702
PspN4I	GGNNCC	2 cut(s)	313, 561
PspPI	GGNCC	2 cut(s)	362, 390
PsrI	GAACNNNNNNTAC	2 cut(s)	318, 350
PstNI	CAGNNNCTG	1 cut(s)	803
PsuI	RGATCY	3 cut(s)	265, 311, 911
PsyI	GACNNNGTC	1 cut(s)	674
RsaI	GTAC	1 cut(s)	701
RsaNI	GTAC	1 cut(s)	700
RseI	CAYNNNNRTG	1 cut(s)	428
Rsr2I	CGGWCCG	1 cut(s)	362
RsrII	CGGWCCG	1 cut(s)	362
SaqAI	TTAA	3 cut(s)	21, 113, 777
SatI	GCNGC	3 cut(s)	606, 632, 966
Sau3AI	GATC	5 cut(s)	259, 265, 311, 346, 911
Sau96I	GGNCC	2 cut(s)	362, 390
SchI	GAGTC	1 cut(s)	769
ScrFI	CCNGG	2 cut(s)	704, 727
SduI	GDGCHC	4 cut(s)	178, 300, 464, 733
SexAI	ACCWGGT	1 cut(s)	702
SfaNI	GCATC	2 cut(s)	198, 516
SgrAI	CRCCGGYG	1 cut(s)	254
SinI	GGWCC	2 cut(s)	362, 390
SmiMI	CAYNNNNRTG	1 cut(s)	428
SmlI	CTYRAG	3 cut(s)	137, 592, 766
SmoI	CTYRAG	3 cut(s)	137, 592, 766
Sse9I	AATT	2 cut(s)	209, 321
SsiI	CCGC	3 cut(s)	252, 605, 713
SspMI	CTAG	3 cut(s)	329, 356, 909
StyD4I	CCNGG	2 cut(s)	702, 725
StyI	CCWWGG	2 cut(s)	149, 393
TaaI	ACNGT	3 cut(s)	362, 390, 456
TaiI	ACGT	2 cut(s)	621, 742
TaqI	TCGA	5 cut(s)	70, 300, 510, 661, 821
TasI	AATT	2 cut(s)	209, 321
TauI	GCSGC	1 cut(s)	608
TfiI	GAWTC	2 cut(s)	7, 302
Tru1I	TTAA	3 cut(s)	21, 113, 777
Tru9I	TTAA	3 cut(s)	21, 113, 777
TscAI	CASTG	1 cut(s)	804
TseFI	GTSAC	2 cut(s)	384, 721
TseI	GCWGC	2 cut(s)	631, 965
Tsp45I	GTSAC	2 cut(s)	384, 721
TspDTI	ATGAA	5 cut(s)	71, 226, 508, 615, 680
TspGWI	ACGGA	1 cut(s)	536
TspRI	CASTG	1 cut(s)	804
Tth111I	GACNNNGTC	1 cut(s)	674
VpaK11BI	GGWCC	2 cut(s)	362, 390
XceI	RCATGY	2 cut(s)	660, 836
XmnI	GAANNNNTTC	1 cut(s)	753
XspI	CTAG	3 cut(s)	329, 356, 909

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.