Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0000332

Physical Location & Seq

Genomic Coordinates Forward (+)

21364466 .. 21373231

Gene Structure 8766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g28940.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2910 bp

ATGCTTAGGCCCTGCTATAGGGTTTTAGCGAAGCCGCATATCTCCTCCATCGTCAACCGTATCAAAGTTGCAGCCGCCGCGCCCCTCCGTCGCTTCCATACTCCGCCTCCTCTACTCCAATCAGCTCCCGCCGCCAAACCGATGGACGCTGGAATCGAAGACCCGGAGAAGAAGAAGAAGAAGGAAGAGAAGGCAAGAGAGAAAGAATTGAAGAAGCAAAAAGCGTTGGAGAAAGCTGCTAAGTTTCAGGCACAACAAGCGAATGCGGCTTCGAAGAAGAGTGAGAAGAAGAATGTGAAGCGTGGGAATGAGGAGGATGAAAATGCAGCTGATTTTTTTGATCCTCCGACTCCAGCTGGCCAGAAGAAGCAGCTGTCTAAGCTGATGGCCAAGCAGTACAGTCCAGCTGCCGTGGAGAAAGGGTGGTATCCGTGGTGGGAGAATTCGGGGTGCTTTAAAGCAGATGCTAAGAGCTCTAAACCTCCGTTTGTGATTGCTTTGCCGCCTCCAAATGTGACCGGCAAGCTTCATATTGGCCATGCTCTTACTGCTGCTATTGAGGACACGATGATTCGTTGGCGAAGAATGTCAGGTTTCAATGCCTTGTGGGTGCCTTCAATGGACCATGCTGGGATTGCAACTCAGGTTGTTGTAGAAAAGAAGCTGATGCGTGAGCGCAATCTAACCCGGCATGATATTGGCCGTGAAGAGTTTGTATCTGAAGTTTGGAAATGGAAAAATAGTTACGGGGACGCTATTTTACAGCAGCTACGGCGTTTGGGTGCTTCATTGGATTGGTCCCGTGAGTGCTTTACAATGGACGAGAAGAGGTGTAAGGCTGTGACAGAGGCTTTTGTGAGGCTTTATGAGAAAGAGCTCATCTACAGGGATAACCGCCTGGTGAACTGGGATTGTATCTTGCGAACAGCGATATCTGAAATTGAGGTGGACTATATAGATATCAAAGAAAGAACATTCCTTGAGGTTCCTGGGTATGAGAACCGTGTTGAATTTGGTGTTTTGACATCATTTGCATACCCTCTGGAAAATAATTTAGGTGAGATAGTTGTTGCCACAACTAGAATTGAAACTATGCTCGGTGATACTGCTATCGCTGTACATCCAGATGATGACAGATATAAGCATCTTCATGGAAAGCATGCCATTCATCCATTTAATGGAAGAAGGATTCCTATAATCTGTGATGCAATCCTGGTGGATCCAGAGTTTGGGACTGGTGCTGTGAAGATTACTCCGGCCCATGATCCTAATGACTTTAATGTCGGAAAGCGCCATAATCTTGGGTTTATAAACGTCTTTACTGATGATGGAAAAATAAACCAGGATGGTGGAGAGTTTGCGGGGATGCCACGCTTCAAAGCCCGGGAGGCAGTTACTGAAGCATTAAAGAAGAAGGGCCTCTTTAAAGAATCAACAGCAAATGAGATGCGTCTTGGTGTATGCTCTAGAAGCAAGGATGTTGTTGAACCCATGATAAAGCCCCAGTGGTATGTCAAATGTAGTGGTATGGCCAAGGGAGCTCTTGATGCTGCTGTAGATGATGATAATAAAAAGCTTGACATCATCCCAAGACAGTATAATGCTGATTGGAAGAGATGGCTCGAGAACATTCACGATTGGTGTGTCTCACGGCAACTTTGGTGGGGTCACCGCATTCCTGCATGGTATGTCGTTTTCGATGGTGACAAGCCAGAAGATTTTGGATCATTAGATGACCGATGGGTGGTTGCAAGAAACAAGGAAGAGGCTAAAGCACTGGCTAGTCAAAGATACAAGGGGAAGGAGTTTAAACTAGAACAAGATCCTGATGTGCTTGACACATGGTTTTCTGCTGGTCTCTTCCCAATGTCCGTGTTGGGGTGGCCAGAAGATACAGAAGATTTAAGAGCTTTCTATCCAACTTCAGTTCTTGAAACTGGTCATGACATTCTTTTTTTCTGGGTTGCTCGTATGGTCATGCTTGGAAGTACATTGGGTGGTAATGTACCTTTCTCAAAGGTGTACTTGCATCCAATGATTCGCGATGCACATGGACGTAAAATGTCCAAGTCCTTGGGGAATGTCATTGATCCTCTTGATGTGATAAATGGTATTTCGCTGGAAGATCTGCACAAAAAGCTTTCAGAGGGAAATTTGGACCCTAGAGAACTAGCCGTAGCCAAAGAAGGCCAAAAAAAGGATTTCCCTGATGGTATTGCTGAATGTGGTTCTGATGCGCTACATTTTGCCCTGGTGTCATACACTGCTCAGTCTGATAAGATAAATCTGGACATCCAAAGGGTTGTGGGTTACCGGCAGTGGTGTAATAAACTTTGGAACGCCGTACGGTTTGCTATGAGCAAACTTGGGGATGATTATGTTCCGGCGTCATCAGTAGTCCCGGATCTGCTTCCATTTAGTTGCCGGTGGATACTCTCGGTACTAAATGAAGCCATCTCCAAAACTGTTTTGTCATTGGAATCATACGAGTTTTCCGATGCAGCCACTGCAGTGTATGCTTGGTGGCAGTACCAATTGTGTGATGTGTTCATTGAAGCCATAAAACCCTACTTTGCTGGAAACGATCCAAAGTTTACATCTGAAAGGGCTTTTGCACGAGACACGCTCTGGTTGTGTCTGGACAATGGACTACGGCTGCTTCATCCATTTATGCCCTTTGTTACTGAAGAACTATGGCAGCGTCTCCCATCATCCAAGCATCACAGTAGGCCAGCATCAATTATGATATGCGACTATCCGTCCATCGTGGAGTGCTGGACAAATGATAGGGTGGAGTCTGAAATGAGTCTAATTGACTCTATTGTGAGATCTCTCCGGTCACTATCTCAAGAGAGTCGTGAAAGTTCTGTGAACTTTTGGCTTTCATGTTGCAAACTGATAAATGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004832 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006438 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

Anticodon_1 Val_tRNA-synt_C tRNA-synt_1

Protein Analysis

970

Amino Acids

110.3

Weight (kDa)

7.29

Isoelectric Point (pI)

44.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_1	PF00133	142 - 763	3.9e-140	tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g	PF09334	165 - 230	4.5e-06	tRNA synthetases class I (M)
tRNA-synt_1_2	PF13603	385 - 444	1.9e-07	Leucyl-tRNA synthetase, editing domain
Anticodon_1	PF08264	809 - 949	6.1e-32	Anticodon-binding domain of tRNA ligase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000332)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14610 AT1G27160
fragaria_vesca	FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica	MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica	Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis	pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis	RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata	RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora	Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa	Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha	Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana	Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1310
AasI	GACNNNNNNGTC	1 cut(s)	1280
AccB1I	GGYRCC	1 cut(s)	610
AccB7I	CCANNNNNTGG	2 cut(s)	1178, 1229
AccII	CGCG	2 cut(s)	80, 2043
AclWI	GGATC	9 cut(s)	335, 1214, 1227, 1259, 1732, 1817, 2084, 2412, 2579
AcoI	YGGCCR	6 cut(s)	358, 387, 535, 700, 1530, 1883
AcsI	RAATTY	3 cut(s)	442, 1010, 2152
AcuI	CTGAAG	4 cut(s)	741, 1419, 1908, 2706
AcyI	GRCGYC	1 cut(s)	2387
AfaI	GTAC	8 cut(s)	398, 1119, 1990, 2007, 2024, 2346, 2442, 2531
AfiI	CCNNNNNNNGG	6 cut(s)	18, 1178, 1229, 1744, 1878, 2197
AgsI	TTSAA	9 cut(s)	211, 598, 618, 1010, 1088, 1378, 1487, 1934, 2555
AhdI	GACNNNNNGTC	1 cut(s)	2758
AjnI	CCWGG	5 cut(s)	897, 988, 1212, 1341, 2250
AleI	CACNNNNGTG	1 cut(s)	2510
Alw21I	GWGCWC	3 cut(s)	476, 879, 1543
Alw26I	GTCTC	4 cut(s)	1651, 1862, 2613, 2708
AlwI	GGATC	9 cut(s)	335, 1214, 1227, 1259, 1732, 1817, 2084, 2412, 2579
AlwNI	CAGNNNCTG	2 cut(s)	1397, 2507
Ama87I	CYCGRG	2 cut(s)	1383, 1622
ApoI	RAATTY	3 cut(s)	442, 1010, 2152
AspLEI	GCGC	4 cut(s)	82, 678, 1293, 2239
AspS9I	GGNCC	6 cut(s)	9, 622, 798, 1258, 1417, 2158
AsuC2I	CCSGG	5 cut(s)	164, 688, 1384, 1385, 2402
AsuHPI	GGTGA	5 cut(s)	913, 1070, 1112, 1661, 1715
AsuII	TTCGAA	1 cut(s)	272
AvaI	CYCGRG	2 cut(s)	1383, 1622
AvaII	GGWCC	3 cut(s)	622, 798, 2158
BalI	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
BamHI	GGATCC	1 cut(s)	1219
BanI	GGYRCC	1 cut(s)	610
BanII	GRGCYC	3 cut(s)	476, 879, 1543
BauI	CACGAG	1 cut(s)	2616
BbsI	GAAGAC	1 cut(s)	165
Bbv12I	GWGCWC	3 cut(s)	476, 879, 1543
BceAI	ACGGC	7 cut(s)	395, 687, 788, 1667, 2159, 2327, 2669
BciT130I	CCWGG	5 cut(s)	899, 990, 1214, 1343, 2252
BciVI	GTATCC	2 cut(s)	438, 2424
BcnI	CCSGG	5 cut(s)	164, 688, 1384, 1385, 2402
BcoDI	GTCTC	4 cut(s)	1651, 1862, 2613, 2708
BfaI	CTAG	6 cut(s)	1080, 1467, 1782, 1814, 2163, 2171
BfmI	CTRYAG	4 cut(s)	16, 883, 1554, 2508
BfoI	RGCGCY	1 cut(s)	1294
BfuI	GTATCC	2 cut(s)	438, 2424
BglI	GCCNNNNNGGC	1 cut(s)	1388
BglII	AGATCT	2 cut(s)	2125, 2828
Bme18I	GGWCC	3 cut(s)	622, 798, 2158
BmeRI	GACNNNNNGTC	1 cut(s)	2758
BmeT110I	CYCGRG	2 cut(s)	1383, 1622
BmgT120I	GGNCC	6 cut(s)	9, 622, 798, 1258, 1417, 2158
BmiI	GGNNCC	5 cut(s)	612, 800, 987, 1221, 2160
BmrI	ACTGGG	2 cut(s)	916, 1498
BmuI	ACTGGG	2 cut(s)	916, 1498
BpiI	GAAGAC	1 cut(s)	165
BplI	GAGNNNNNCTC	2 cut(s)	2610, 2642
BpmI	CTGGAG	1 cut(s)	336
Bpu10I	CCTNAGC	1 cut(s)	5
Bpu14I	TTCGAA	1 cut(s)	272
BpuEI	CTTGAG	2 cut(s)	1001, 2832
BpuMI	CCSGG	5 cut(s)	164, 688, 1384, 1385, 2402
BsaHI	GRCGYC	1 cut(s)	2387
BsaI	GGTCTC	1 cut(s)	1862
BsaJI	CCNNGG	7 cut(s)	411, 431, 989, 1383, 1533, 2073, 2250
BsaWI	WCCGGW	1 cut(s)	2835
BsaXI	ACNNNNNCTCC	4 cut(s)	91, 121, 407, 437
Bsc4I	CCNNNNNNNGG	6 cut(s)	18, 1178, 1229, 1744, 1878, 2197
Bse118I	RCCGGY	3 cut(s)	518, 2313, 2424
Bse1I	ACTGG	5 cut(s)	911, 1240, 1504, 1782, 1942
BseBI	CCWGG	5 cut(s)	899, 990, 1214, 1343, 2252
BseDI	CCNNGG	7 cut(s)	411, 431, 989, 1383, 1533, 2073, 2250
BseLI	CCNNNNNNNGG	6 cut(s)	18, 1178, 1229, 1744, 1878, 2197
BseMII	CTCAG	2 cut(s)	656, 2282
BseNI	ACTGG	5 cut(s)	911, 1240, 1504, 1782, 1942
BseRI	GAGGAG	3 cut(s)	34, 99, 326
BseYI	CCCAGC	1 cut(s)	629
BsgI	GTGCAG	1 cut(s)	2114
Bsh1236I	CGCG	2 cut(s)	80, 2043
BshNI	GGYRCC	1 cut(s)	610
BsiHKAI	GWGCWC	3 cut(s)	476, 879, 1543
BsiHKCI	CYCGRG	2 cut(s)	1383, 1622
BsiWI	CGTACG	1 cut(s)	2344
BslFI	GGGAC	4 cut(s)	764, 784, 1246, 2384
BslI	CCNNNNNNNGG	6 cut(s)	18, 1178, 1229, 1744, 1878, 2197
BsmAI	GTCTC	4 cut(s)	1651, 1862, 2613, 2708
BsmBI	CGTCTC	1 cut(s)	2708
BsmFI	GGGAC	4 cut(s)	764, 784, 1246, 2384
BsmI	GAATGC	2 cut(s)	268, 1674
Bso31I	GGTCTC	1 cut(s)	1862
BsoBI	CYCGRG	2 cut(s)	1383, 1622
Bsp119I	TTCGAA	1 cut(s)	272
Bsp1286I	GDGCHC	3 cut(s)	476, 879, 1543
Bsp1407I	TGTACA	1 cut(s)	1117
Bsp68I	TCGCGA	1 cut(s)	2043
BspCNI	CTCAG	2 cut(s)	655, 2281
BspFNI	CGCG	2 cut(s)	80, 2043
BspHI	TCATGA	1 cut(s)	1942
BspLI	GGNNCC	5 cut(s)	612, 800, 987, 1221, 2160
BspMAI	CTGCAG	1 cut(s)	2512
BspPI	GGATC	9 cut(s)	335, 1214, 1227, 1259, 1732, 1817, 2084, 2412, 2579
BspT104I	TTCGAA	1 cut(s)	272
BspT107I	GGYRCC	1 cut(s)	610
BspTNI	GGTCTC	1 cut(s)	1862
BsrFI	RCCGGY	3 cut(s)	518, 2313, 2424
BsrGI	TGTACA	1 cut(s)	1117
BsrI	ACTGG	5 cut(s)	911, 1240, 1504, 1782, 1942
BssAI	RCCGGY	3 cut(s)	518, 2313, 2424
BssECI	CCNNGG	7 cut(s)	411, 431, 989, 1383, 1533, 2073, 2250
BssNI	GRCGYC	1 cut(s)	2387
BssSI	CACGAG	1 cut(s)	2616
BssT1I	CCWWGG	2 cut(s)	1533, 2073
Bst2BI	CACGAG	1 cut(s)	2616
Bst2UI	CCWGG	5 cut(s)	899, 990, 1214, 1343, 2252
Bst4CI	ACNGT	7 cut(s)	59, 401, 1004, 1596, 2349, 2467, 2726
Bst6I	CTCTTC	7 cut(s)	180, 272, 702, 821, 1607, 1758, 1865
BstACI	GRCGYC	1 cut(s)	2387
BstAPI	GCANNNNNTGC	2 cut(s)	2507, 2516
BstAUI	TGTACA	1 cut(s)	1117
BstBI	TTCGAA	1 cut(s)	272
BstC8I	GCNNGC	4 cut(s)	358, 524, 1161, 2733
BstDEI	CTNAG	6 cut(s)	5, 240, 378, 468, 642, 2268
BstDSI	CCRYGG	2 cut(s)	411, 431
BstEII	GGTNACC	2 cut(s)	1667, 2309
BstENI	CCTNNNNNAGG	1 cut(s)	16
BstFNI	CGCG	2 cut(s)	80, 2043
BstH2I	RGCGCY	1 cut(s)	1294
BstHHI	GCGC	4 cut(s)	82, 678, 1293, 2239
BstMAI	GTCTC	4 cut(s)	1651, 1862, 2613, 2708
BstNI	CCWGG	5 cut(s)	899, 990, 1214, 1343, 2252
BstNSI	RCATGY	1 cut(s)	1163
BstPI	GGTNACC	2 cut(s)	1667, 2309
BstSFI	CTRYAG	4 cut(s)	16, 883, 1554, 2508
BstUI	CGCG	2 cut(s)	80, 2043
BstV2I	GAAGAC	1 cut(s)	165
BstX2I	RGATCY	5 cut(s)	1219, 1822, 2125, 2404, 2828
BstXI	CCANNNNNNTGG	4 cut(s)	142, 1301, 1349, 2074
BstYI	RGATCY	5 cut(s)	1219, 1822, 2125, 2404, 2828
BsuI	GTATCC	2 cut(s)	438, 2424
BtgI	CCRYGG	2 cut(s)	411, 431
BtgZI	GCGATG	1 cut(s)	2058
BtsI	GCAGTG	4 cut(s)	2262, 2324, 2505, 2517
BtsIMutI	CAGTG	6 cut(s)	1511, 1775, 2262, 2324, 2505, 2517
BtuMI	TCGCGA	1 cut(s)	2043
Cac8I	GCNNGC	4 cut(s)	358, 524, 1161, 2733
CaiI	CAGNNNCTG	2 cut(s)	1397, 2507
CciI	TCATGA	1 cut(s)	1942
CfoI	GCGC	4 cut(s)	82, 678, 1293, 2239
Cfr10I	RCCGGY	3 cut(s)	518, 2313, 2424
Cfr13I	GGNCC	6 cut(s)	9, 622, 798, 1258, 1417, 2158
Cfr9I	CCCGGG	1 cut(s)	1383
CseI	GACGC	5 cut(s)	155, 761, 1439, 2376, 2690
Csp6I	GTAC	8 cut(s)	397, 1118, 1989, 2006, 2023, 2345, 2441, 2530
CspCI	CAANNNNNGTGG	6 cut(s)	1197, 1232, 1504, 1539, 1643, 1678
CviQI	GTAC	8 cut(s)	397, 1118, 1989, 2006, 2023, 2345, 2441, 2530
DdeI	CTNAG	6 cut(s)	5, 240, 378, 468, 642, 2268
DraI	TTTAAA	3 cut(s)	457, 1426, 1810
DrdI	GACNNNNNNGTC	1 cut(s)	1280
DriI	GACNNNNNGTC	1 cut(s)	2758
DseDI	GACNNNNNNGTC	1 cut(s)	1280
EaeI	YGGCCR	6 cut(s)	358, 387, 535, 700, 1530, 1883
Eam1104I	CTCTTC	7 cut(s)	180, 272, 702, 821, 1607, 1758, 1865
Eam1105I	GACNNNNNGTC	1 cut(s)	2758
EarI	CTCTTC	7 cut(s)	180, 272, 702, 821, 1607, 1758, 1865
EciI	GGCGGA	1 cut(s)	93
Ecl136II	GAGCTC	3 cut(s)	474, 877, 1541
Eco130I	CCWWGG	2 cut(s)	1533, 2073
Eco24I	GRGCYC	3 cut(s)	476, 879, 1543
Eco31I	GGTCTC	1 cut(s)	1862
Eco32I	GATATC	2 cut(s)	933, 961
Eco47I	GGWCC	3 cut(s)	622, 798, 2158
Eco53kI	GAGCTC	3 cut(s)	474, 877, 1541
Eco57I	CTGAAG	4 cut(s)	741, 1419, 1908, 2706
Eco88I	CYCGRG	2 cut(s)	1383, 1622
Eco91I	GGTNACC	2 cut(s)	1667, 2309
EcoICRI	GAGCTC	3 cut(s)	474, 877, 1541
EcoNI	CCTNNNNNAGG	1 cut(s)	16
EcoO109I	RGGNCCY	2 cut(s)	9, 1417
EcoO65I	GGTNACC	2 cut(s)	1667, 2309
EcoRI	GAATTC	1 cut(s)	442
EcoRII	CCWGG	5 cut(s)	897, 988, 1212, 1341, 2250
EcoRV	GATATC	2 cut(s)	933, 961
EcoT14I	CCWWGG	2 cut(s)	1533, 2073
EcoT38I	GRGCYC	3 cut(s)	476, 879, 1543
ErhI	CCWWGG	2 cut(s)	1533, 2073
Esp3I	CGTCTC	1 cut(s)	2708
FalI	AAGNNNNNCTT	4 cut(s)	1406, 1438, 2009, 2041
FaqI	GGGAC	4 cut(s)	764, 784, 1246, 2384
FauI	CCCGC	2 cut(s)	136, 1354
FriOI	GRGCYC	3 cut(s)	476, 879, 1543
FspBI	CTAG	6 cut(s)	1080, 1467, 1782, 1814, 2163, 2171
GlaI	GCGC	4 cut(s)	81, 677, 1292, 2238
GsaI	CCCAGC	1 cut(s)	633
GsuI	CTGGAG	1 cut(s)	336
HaeII	RGCGCY	1 cut(s)	1294
HgaI	GACGC	5 cut(s)	155, 761, 1439, 2376, 2690
HhaI	GCGC	4 cut(s)	82, 678, 1293, 2239
Hin1I	GRCGYC	1 cut(s)	2387
Hin6I	GCGC	4 cut(s)	80, 676, 1291, 2237
HinP1I	GCGC	4 cut(s)	80, 676, 1291, 2237
HincII	GTYRAC	1 cut(s)	55
HindII	GTYRAC	1 cut(s)	55
HindIII	AAGCTT	3 cut(s)	524, 1574, 2138
HphI	GGTGA	5 cut(s)	913, 1070, 1112, 1661, 1715
Hpy166II	GTNNAC	6 cut(s)	55, 904, 949, 2023, 2595, 2872
Hpy8I	GTNNAC	6 cut(s)	55, 904, 949, 2023, 2595, 2872
Hpy99I	CGWCG	1 cut(s)	93
HpyAV	CCTTC	7 cut(s)	175, 184, 624, 1179, 1408, 1795, 2180
HpyCH4III	ACNGT	7 cut(s)	59, 401, 1004, 1596, 2349, 2467, 2726
HpyCH4IV	ACGT	2 cut(s)	1314, 2056
HpyF3I	CTNAG	6 cut(s)	5, 240, 378, 468, 642, 2268
HpySE526I	ACGT	2 cut(s)	1314, 2056
Hsp92I	GRCGYC	1 cut(s)	2387
HspAI	GCGC	4 cut(s)	80, 676, 1291, 2237
LmnI	GCTCC	2 cut(s)	130, 1538
MaeI	CTAG	6 cut(s)	1080, 1467, 1782, 1814, 2163, 2171
MaeII	ACGT	2 cut(s)	1314, 2056
MaeIII	GTNAC	9 cut(s)	514, 743, 841, 1393, 1667, 1703, 2309, 2680, 2838
MfeI	CAATTG	1 cut(s)	2534
MflI	RGATCY	5 cut(s)	1219, 1822, 2125, 2404, 2828
MhlI	GDGCHC	3 cut(s)	476, 879, 1543
MlsI	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
MluNI	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
MlyI	GAGTC	5 cut(s)	343, 2804, 2810, 2815, 2863
MmeI	TCCRAC	4 cut(s)	207, 371, 1264, 1943
Mox20I	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
MscI	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
MseI	TTAA	7 cut(s)	456, 1176, 1278, 1406, 1425, 1809, 1904
MslI	CAYNNNNRTG	3 cut(s)	1125, 1149, 2510
Msp20I	TGGCCA	5 cut(s)	360, 389, 537, 1532, 1885
MspA1I	CMGCKG	4 cut(s)	329, 356, 373, 407
MssI	GTTTAAAC	1 cut(s)	1810
MunI	CAATTG	1 cut(s)	2534
Mva1269I	GAATGC	2 cut(s)	268, 1674
MvaI	CCWGG	5 cut(s)	899, 990, 1214, 1343, 2252
MvnI	CGCG	2 cut(s)	80, 2043
NciI	CCSGG	5 cut(s)	164, 688, 1384, 1385, 2402
NlaIV	GGNNCC	5 cut(s)	612, 800, 987, 1221, 2160
NmuCI	GTSAC	5 cut(s)	514, 841, 1667, 1703, 2838
NruI	TCGCGA	1 cut(s)	2043
NspI	RCATGY	1 cut(s)	1163
NspV	TTCGAA	1 cut(s)	272
OliI	CACNNNNGTG	1 cut(s)	2510
PaeI	GCATGC	1 cut(s)	1163
PaeR7I	CTCGAG	1 cut(s)	1622
PagI	TCATGA	1 cut(s)	1942
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 2493
PctI	GAATGC	2 cut(s)	268, 1674
PfeI	GAWTC	6 cut(s)	153, 571, 1189, 1430, 2038, 2480
Pfl23II	CGTACG	1 cut(s)	2344
PflMI	CCANNNNNTGG	2 cut(s)	1178, 1229
PfoI	TCCNGGA	1 cut(s)	2400
PleI	GAGTC	5 cut(s)	343, 2803, 2810, 2814, 2862
PmeI	GTTTAAAC	1 cut(s)	1810
PpsI	GAGTC	5 cut(s)	343, 2803, 2810, 2814, 2862
PsiI	TTATAA	1 cut(s)	1310
Psp124BI	GAGCTC	3 cut(s)	476, 879, 1543
Psp6I	CCWGG	5 cut(s)	897, 988, 1212, 1341, 2250
PspEI	GGTNACC	2 cut(s)	1667, 2309
PspFI	CCCAGC	1 cut(s)	629
PspGI	CCWGG	5 cut(s)	897, 988, 1212, 1341, 2250
PspLI	CGTACG	1 cut(s)	2344
PspN4I	GGNNCC	5 cut(s)	612, 800, 987, 1221, 2160
PspPI	GGNCC	6 cut(s)	9, 622, 798, 1258, 1417, 2158
PstI	CTGCAG	1 cut(s)	2512
PstNI	CAGNNNCTG	2 cut(s)	1397, 2507
PsuI	RGATCY	5 cut(s)	1219, 1822, 2125, 2404, 2828
PvuII	CAGCTG	4 cut(s)	329, 356, 373, 407
RruI	TCGCGA	1 cut(s)	2043
RsaI	GTAC	8 cut(s)	398, 1119, 1990, 2007, 2024, 2346, 2442, 2531
RsaNI	GTAC	8 cut(s)	397, 1118, 1989, 2006, 2023, 2345, 2441, 2530
RseI	CAYNNNNRTG	3 cut(s)	1125, 1149, 2510
SacI	GAGCTC	3 cut(s)	476, 879, 1543
SaqAI	TTAA	7 cut(s)	456, 1176, 1278, 1406, 1425, 1809, 1904
Sau96I	GGNCC	6 cut(s)	9, 622, 798, 1258, 1417, 2158
SchI	GAGTC	5 cut(s)	343, 2804, 2810, 2815, 2863
SduI	GDGCHC	3 cut(s)	476, 879, 1543
SfcI	CTRYAG	4 cut(s)	16, 883, 1554, 2508
Sfr274I	CTCGAG	1 cut(s)	1622
SfuI	TTCGAA	1 cut(s)	272
SinI	GGWCC	3 cut(s)	622, 798, 2158
SlaI	CTCGAG	1 cut(s)	1622
SmaI	CCCGGG	1 cut(s)	1385
SmiMI	CAYNNNNRTG	3 cut(s)	1125, 1149, 2510
SmlI	CTYRAG	3 cut(s)	980, 1622, 2847
SmoI	CTYRAG	3 cut(s)	980, 1622, 2847
SphI	GCATGC	1 cut(s)	1163
SspMI	CTAG	6 cut(s)	1080, 1467, 1782, 1814, 2163, 2171
SstI	GAGCTC	3 cut(s)	476, 879, 1543
StyI	CCWWGG	2 cut(s)	1533, 2073
TaaI	ACNGT	7 cut(s)	59, 401, 1004, 1596, 2349, 2467, 2726
TaiI	ACGT	2 cut(s)	1317, 2059
TaqI	TCGA	4 cut(s)	156, 272, 1623, 1698
TaqII	GACCGA	1 cut(s)	1752
TatI	WGTACW	4 cut(s)	396, 1117, 1988, 2022
TauI	GCSGC	6 cut(s)	37, 77, 80, 134, 269, 505
TfiI	GAWTC	6 cut(s)	153, 571, 1189, 1430, 2038, 2480
Tru1I	TTAA	7 cut(s)	456, 1176, 1278, 1406, 1425, 1809, 1904
Tru9I	TTAA	7 cut(s)	456, 1176, 1278, 1406, 1425, 1809, 1904
TscAI	CASTG	6 cut(s)	1511, 1782, 2269, 2324, 2512, 2517
TseFI	GTSAC	5 cut(s)	514, 841, 1667, 1703, 2838
Tsp45I	GTSAC	5 cut(s)	514, 841, 1667, 1703, 2838
TspDTI	ATGAA	9 cut(s)	333, 518, 777, 1139, 1157, 2463, 2539, 2651, 2874
TspGWI	ACGGA	5 cut(s)	77, 420, 474, 1861, 2748
TspMI	CCCGGG	1 cut(s)	1383
TspRI	CASTG	6 cut(s)	1511, 1782, 2269, 2324, 2512, 2517
Van91I	CCANNNNNTGG	2 cut(s)	1178, 1229
VpaK11BI	GGWCC	3 cut(s)	622, 798, 2158
XagI	CCTNNNNNAGG	1 cut(s)	16
XapI	RAATTY	3 cut(s)	442, 1010, 2152
XbaI	TCTAGA	1 cut(s)	1466
XceI	RCATGY	1 cut(s)	1163
XhoI	CTCGAG	1 cut(s)	1622
XmaI	CCCGGG	1 cut(s)	1383
XspI	CTAG	6 cut(s)	1080, 1467, 1782, 1814, 2163, 2171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.