Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1 | PF00133 | 21 - 198 | 6.4e-60 | tRNA synthetases class I (I, L, M and V) |
| tRNA-synt_1g | PF09334 | 46 - 98 | 2.5e-07 | tRNA synthetases class I (M) |
| tRNA-synt_1 | PF00133 | 233 - 330 | 4.5e-17 | tRNA synthetases class I (I, L, M and V) |
| Anticodon_1 | PF08264 | 350 - 485 | 2.3e-32 | Anticodon-binding domain of tRNA ligase |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 197 |
| Acc16I | TGCGCA | 1 cut(s) | 747 |
| AccB1I | GGYRCC | 1 cut(s) | 380 |
| AccI | GTMKAC | 2 cut(s) | 826, 1480 |
| AciI | CCGC | 2 cut(s) | 131, 202 |
| AclWI | GGATC | 4 cut(s) | 782, 1045, 1058, 1199 |
| AcsI | RAATTY | 1 cut(s) | 1441 |
| AdeI | CACNNNGTG | 1 cut(s) | 234 |
| AfaI | GTAC | 4 cut(s) | 26, 553, 722, 1062 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 116, 306, 1594 |
| AgsI | TTSAA | 5 cut(s) | 33, 821, 843, 917, 1553 |
| AjnI | CCWGG | 1 cut(s) | 616 |
| AluBI | AGCT | 6 cut(s) | 102, 292, 397, 413, 838, 1111 |
| AluI | AGCT | 6 cut(s) | 102, 292, 397, 413, 838, 1111 |
| Alw21I | GWGCWC | 2 cut(s) | 10, 461 |
| Alw26I | GTCTC | 1 cut(s) | 1400 |
| AlwI | GGATC | 4 cut(s) | 782, 1045, 1058, 1199 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 397, 406 |
| AoxI | GGCC | 1 cut(s) | 163 |
| ApoI | RAATTY | 1 cut(s) | 1441 |
| AspLEI | GCGC | 1 cut(s) | 748 |
| AspS9I | GGNCC | 5 cut(s) | 56, 149, 163, 250, 370 |
| AsuHPI | GGTGA | 2 cut(s) | 200, 1332 |
| AvaII | GGWCC | 4 cut(s) | 56, 149, 250, 370 |
| BaeGI | GKGCMC | 1 cut(s) | 383 |
| BamHI | GGATCC | 1 cut(s) | 1050 |
| BanI | GGYRCC | 1 cut(s) | 380 |
| BbsI | GAAGAC | 1 cut(s) | 1316 |
| Bbv12I | GWGCWC | 2 cut(s) | 10, 461 |
| BbvCI | CCTCAGC | 1 cut(s) | 684 |
| BccI | CCATC | 6 cut(s) | 115, 241, 972, 1187, 1351, 1408 |
| BciT130I | CCWGG | 1 cut(s) | 618 |
| BcoDI | GTCTC | 1 cut(s) | 1400 |
| BfaI | CTAG | 4 cut(s) | 242, 671, 986, 1410 |
| BfmI | CTRYAG | 3 cut(s) | 39, 398, 511 |
| BmcAI | AGTACT | 1 cut(s) | 1062 |
| Bme1390I | CCNGG | 1 cut(s) | 618 |
| Bme18I | GGWCC | 4 cut(s) | 56, 149, 250, 370 |
| BmgT120I | GGNCC | 5 cut(s) | 56, 149, 163, 250, 370 |
| BmiI | GGNNCC | 3 cut(s) | 57, 382, 1052 |
| BmrFI | CCNGG | 1 cut(s) | 618 |
| BmrI | ACTGGG | 2 cut(s) | 416, 544 |
| BmsI | GCATC | 5 cut(s) | 82, 733, 922, 1108, 1343 |
| BmuI | ACTGGG | 2 cut(s) | 416, 544 |
| BpiI | GAAGAC | 1 cut(s) | 1316 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 402, 434, 443, 475 |
| Bpu10I | CCTNAGC | 1 cut(s) | 684 |
| Bsa29I | ATCGAT | 1 cut(s) | 1349 |
| BsaBI | GATNNNNATC | 1 cut(s) | 993 |
| BsaJI | CCNNGG | 3 cut(s) | 59, 253, 1125 |
| BsaWI | WCCGGW | 1 cut(s) | 146 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 687, 717, 1514, 1544 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 116, 306, 1594 |
| Bse1I | ACTGG | 7 cut(s) | 411, 539, 791, 1026, 1270, 1537, 1615 |
| Bse3DI | GCAATG | 1 cut(s) | 545 |
| Bse8I | GATNNNNATC | 1 cut(s) | 993 |
| BseBI | CCWGG | 1 cut(s) | 618 |
| BseCI | ATCGAT | 1 cut(s) | 1349 |
| BseDI | CCNNGG | 3 cut(s) | 59, 253, 1125 |
| BseGI | GGATG | 7 cut(s) | 126, 252, 454, 616, 1282, 1419, 1619 |
| BseJI | GATNNNNATC | 1 cut(s) | 993 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 116, 306, 1594 |
| BseMI | GCAATG | 1 cut(s) | 545 |
| BseMII | CTCAG | 4 cut(s) | 284, 675, 963, 1071 |
| BseNI | ACTGG | 7 cut(s) | 411, 539, 791, 1026, 1270, 1537, 1615 |
| BseSI | GKGCMC | 1 cut(s) | 383 |
| BsgI | GTGCAG | 3 cut(s) | 711, 948, 1552 |
| BshFI | GGCC | 1 cut(s) | 165 |
| BshNI | GGYRCC | 1 cut(s) | 380 |
| BshVI | ATCGAT | 1 cut(s) | 1349 |
| BsiHKAI | GWGCWC | 2 cut(s) | 10, 461 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 116, 306, 1594 |
| BsmAI | GTCTC | 1 cut(s) | 1400 |
| BsmI | GAATGC | 1 cut(s) | 1046 |
| BsnI | GGCC | 1 cut(s) | 165 |
| Bsp1286I | GDGCHC | 3 cut(s) | 10, 383, 461 |
| Bsp143I | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| Bsp19I | CCATGG | 2 cut(s) | 59, 253 |
| BspACI | CCGC | 2 cut(s) | 131, 202 |
| BspANI | GGCC | 1 cut(s) | 165 |
| BspCNI | CTCAG | 4 cut(s) | 283, 676, 964, 1070 |
| BspDI | ATCGAT | 1 cut(s) | 1349 |
| BspLI | GGNNCC | 3 cut(s) | 57, 382, 1052 |
| BspMAI | CTGCAG | 1 cut(s) | 402 |
| BspPI | GGATC | 4 cut(s) | 782, 1045, 1058, 1199 |
| BspQI | GCTCTTC | 1 cut(s) | 942 |
| BspT107I | GGYRCC | 1 cut(s) | 380 |
| BsrDI | GCAATG | 1 cut(s) | 545 |
| BsrI | ACTGG | 7 cut(s) | 411, 539, 791, 1026, 1270, 1537, 1615 |
| BssECI | CCNNGG | 3 cut(s) | 59, 253, 1125 |
| BssMI | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| BssT1I | CCWWGG | 3 cut(s) | 59, 253, 1125 |
| Bst2UI | CCWGG | 1 cut(s) | 618 |
| Bst4CI | ACNGT | 6 cut(s) | 29, 178, 809, 1036, 1087, 1575 |
| Bst6I | CTCTTC | 3 cut(s) | 942, 1509, 1587 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 397 |
| BstDEI | CTNAG | 5 cut(s) | 270, 684, 972, 1057, 1499 |
| BstDSI | CCRYGG | 2 cut(s) | 59, 253 |
| BstF5I | GGATG | 7 cut(s) | 126, 252, 454, 616, 1282, 1419, 1619 |
| BstHHI | GCGC | 1 cut(s) | 748 |
| BstKTI | GATC | 5 cut(s) | 325, 790, 991, 1053, 1207 |
| BstMAI | GTCTC | 1 cut(s) | 1400 |
| BstMBI | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 397, 400, 689, 1127 |
| BstNI | CCWGG | 1 cut(s) | 618 |
| BstNSI | RCATGY | 1 cut(s) | 1048 |
| BstSCI | CCNGG | 1 cut(s) | 616 |
| BstSFI | CTRYAG | 3 cut(s) | 39, 398, 511 |
| BstSLI | GKGCMC | 1 cut(s) | 383 |
| BstV2I | GAAGAC | 1 cut(s) | 1316 |
| BstX2I | RGATCY | 1 cut(s) | 1050 |
| BstYI | RGATCY | 1 cut(s) | 1050 |
| Bsu15I | ATCGAT | 1 cut(s) | 1349 |
| BsuRI | GGCC | 1 cut(s) | 165 |
| BsuTUI | ATCGAT | 1 cut(s) | 1349 |
| BtgI | CCRYGG | 2 cut(s) | 59, 253 |
| BtsCI | GGATG | 7 cut(s) | 126, 252, 454, 616, 1282, 1419, 1619 |
| BtsI | GCAGTG | 1 cut(s) | 125 |
| BtsIMutI | CAGTG | 5 cut(s) | 125, 174, 1019, 1263, 1544 |
| CaiI | CAGNNNCTG | 2 cut(s) | 397, 406 |
| CfoI | GCGC | 1 cut(s) | 748 |
| Cfr13I | GGNCC | 5 cut(s) | 56, 149, 163, 250, 370 |
| ClaI | ATCGAT | 1 cut(s) | 1349 |
| CseI | GACGC | 1 cut(s) | 1310 |
| Csp6I | GTAC | 4 cut(s) | 25, 552, 721, 1061 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 450, 485 |
| CviQI | GTAC | 4 cut(s) | 25, 552, 721, 1061 |
| DdeI | CTNAG | 5 cut(s) | 270, 684, 972, 1057, 1499 |
| DpnI | GATC | 5 cut(s) | 324, 789, 990, 1052, 1206 |
| DpnII | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| DraIII | CACNNNGTG | 1 cut(s) | 234 |
| Eam1104I | CTCTTC | 3 cut(s) | 942, 1509, 1587 |
| EarI | CTCTTC | 3 cut(s) | 942, 1509, 1587 |
| Eco130I | CCWWGG | 3 cut(s) | 59, 253, 1125 |
| Eco47I | GGWCC | 4 cut(s) | 56, 149, 250, 370 |
| EcoRI | GAATTC | 1 cut(s) | 1441 |
| EcoRII | CCWGG | 1 cut(s) | 616 |
| EcoT14I | CCWWGG | 3 cut(s) | 59, 253, 1125 |
| EcoT22I | ATGCAT | 2 cut(s) | 1046, 1376 |
| ErhI | CCWWGG | 3 cut(s) | 59, 253, 1125 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 707, 739, 836, 868, 884, 916, 1175, 1207 |
| FblI | GTMKAC | 2 cut(s) | 826, 1480 |
| FokI | GGATG | 7 cut(s) | 133, 259, 461, 623, 1269, 1426, 1626 |
| FspBI | CTAG | 4 cut(s) | 242, 671, 986, 1410 |
| FspI | TGCGCA | 1 cut(s) | 747 |
| GlaI | GCGC | 1 cut(s) | 747 |
| HaeIII | GGCC | 1 cut(s) | 165 |
| HapII | CCGG | 1 cut(s) | 147 |
| HgaI | GACGC | 1 cut(s) | 1310 |
| HhaI | GCGC | 1 cut(s) | 748 |
| Hin6I | GCGC | 1 cut(s) | 746 |
| HinP1I | GCGC | 1 cut(s) | 746 |
| HincII | GTYRAC | 2 cut(s) | 651, 1481 |
| HindII | GTYRAC | 2 cut(s) | 651, 1481 |
| HindIII | AAGCTT | 1 cut(s) | 836 |
| HinfI | GANTC | 5 cut(s) | 578, 736, 1100, 1150, 1624 |
| HpaII | CCGG | 1 cut(s) | 147 |
| HphI | GGTGA | 2 cut(s) | 200, 1332 |
| Hpy166II | GTNNAC | 7 cut(s) | 25, 532, 651, 721, 827, 1475, 1481 |
| Hpy188I | TCNGA | 3 cut(s) | 301, 565, 1117 |
| Hpy188III | TCNNGA | 9 cut(s) | 343, 419, 429, 671, 740, 818, 986, 1259, 1472 |
| Hpy8I | GTNNAC | 7 cut(s) | 25, 532, 651, 721, 827, 1475, 1481 |
| Hpy99I | CGWCG | 2 cut(s) | 1482, 1485 |
| HpyAV | CCTTC | 5 cut(s) | 591, 815, 856, 1306, 1460 |
| HpyCH4III | ACNGT | 6 cut(s) | 29, 178, 809, 1036, 1087, 1575 |
| HpyCH4IV | ACGT | 2 cut(s) | 192, 1477 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 397, 400, 689, 1127 |
| HpyF3I | CTNAG | 5 cut(s) | 270, 684, 972, 1057, 1499 |
| HpySE526I | ACGT | 2 cut(s) | 192, 1477 |
| HspAI | GCGC | 1 cut(s) | 746 |
| Kzo9I | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| LguI | GCTCTTC | 1 cut(s) | 942 |
| LmnI | GCTCC | 3 cut(s) | 107, 410, 1609 |
| LweI | GCATC | 5 cut(s) | 82, 733, 922, 1108, 1343 |
| MaeI | CTAG | 4 cut(s) | 242, 671, 986, 1410 |
| MaeII | ACGT | 2 cut(s) | 192, 1477 |
| MaeIII | GTNAC | 4 cut(s) | 142, 1017, 1361, 1569 |
| MalI | GATC | 5 cut(s) | 324, 789, 990, 1052, 1206 |
| MboI | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| MboII | GAAGA | 9 cut(s) | 298, 929, 929, 1316, 1319, 1402, 1409, 1526, 1604 |
| MfeI | CAATTG | 1 cut(s) | 1074 |
| MflI | RGATCY | 1 cut(s) | 1050 |
| MhlI | GDGCHC | 3 cut(s) | 10, 383, 461 |
| MluCI | AATT | 3 cut(s) | 1074, 1310, 1441 |
| MlyI | GAGTC | 2 cut(s) | 1109, 1633 |
| MmeI | TCCRAC | 1 cut(s) | 1631 |
| Mph1103I | ATGCAT | 2 cut(s) | 1046, 1376 |
| MseI | TTAA | 1 cut(s) | 1271 |
| MspA1I | CMGCKG | 1 cut(s) | 397 |
| MspI | CCGG | 1 cut(s) | 147 |
| MspR9I | CCNGG | 1 cut(s) | 618 |
| MunI | CAATTG | 1 cut(s) | 1074 |
| Mva1269I | GAATGC | 1 cut(s) | 1046 |
| MvaI | CCWGG | 1 cut(s) | 618 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 397, 400, 689, 1127 |
| NcoI | CCATGG | 2 cut(s) | 59, 253 |
| NdeII | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| NlaIV | GGNNCC | 3 cut(s) | 57, 382, 1052 |
| NmuCI | GTSAC | 4 cut(s) | 142, 1017, 1361, 1569 |
| NsbI | TGCGCA | 1 cut(s) | 747 |
| NsiI | ATGCAT | 2 cut(s) | 1046, 1376 |
| NspI | RCATGY | 1 cut(s) | 1048 |
| PciSI | GCTCTTC | 1 cut(s) | 942 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1477 |
| PctI | GAATGC | 1 cut(s) | 1046 |
| PfeI | GAWTC | 3 cut(s) | 578, 736, 1150 |
| PleI | GAGTC | 2 cut(s) | 1108, 1632 |
| PpsI | GAGTC | 2 cut(s) | 1108, 1632 |
| PsiI | TTATAA | 1 cut(s) | 197 |
| Psp6I | CCWGG | 1 cut(s) | 616 |
| PspGI | CCWGG | 1 cut(s) | 616 |
| PspN4I | GGNNCC | 3 cut(s) | 57, 382, 1052 |
| PspPI | GGNCC | 5 cut(s) | 56, 149, 163, 250, 370 |
| PstI | CTGCAG | 1 cut(s) | 402 |
| PstNI | CAGNNNCTG | 2 cut(s) | 397, 406 |
| PsuI | RGATCY | 1 cut(s) | 1050 |
| PvuII | CAGCTG | 1 cut(s) | 397 |
| RsaI | GTAC | 4 cut(s) | 26, 553, 722, 1062 |
| RsaNI | GTAC | 4 cut(s) | 25, 552, 721, 1061 |
| SalI | GTCGAC | 1 cut(s) | 1479 |
| SapI | GCTCTTC | 1 cut(s) | 942 |
| SaqAI | TTAA | 1 cut(s) | 1271 |
| Sau3AI | GATC | 5 cut(s) | 322, 787, 988, 1050, 1204 |
| Sau96I | GGNCC | 5 cut(s) | 56, 149, 163, 250, 370 |
| ScaI | AGTACT | 1 cut(s) | 1062 |
| SchI | GAGTC | 2 cut(s) | 1109, 1633 |
| ScrFI | CCNGG | 1 cut(s) | 618 |
| SduI | GDGCHC | 3 cut(s) | 10, 383, 461 |
| SfaNI | GCATC | 5 cut(s) | 82, 733, 922, 1108, 1343 |
| SfcI | CTRYAG | 3 cut(s) | 39, 398, 511 |
| SgrDI | CGTCGACG | 1 cut(s) | 1479 |
| SinI | GGWCC | 4 cut(s) | 56, 149, 250, 370 |
| Sse9I | AATT | 3 cut(s) | 1074, 1310, 1441 |
| SsiI | CCGC | 2 cut(s) | 131, 202 |
| SspMI | CTAG | 4 cut(s) | 242, 671, 986, 1410 |
| StyD4I | CCNGG | 1 cut(s) | 616 |
| StyI | CCWWGG | 3 cut(s) | 59, 253, 1125 |
| TaaI | ACNGT | 6 cut(s) | 29, 178, 809, 1036, 1087, 1575 |
| TaiI | ACGT | 2 cut(s) | 195, 1480 |
| TaqI | TCGA | 6 cut(s) | 420, 428, 991, 1173, 1349, 1480 |
| TasI | AATT | 3 cut(s) | 1074, 1310, 1441 |
| TatI | WGTACW | 2 cut(s) | 720, 1060 |
| TauI | GCSGC | 1 cut(s) | 133 |
| TfiI | GAWTC | 3 cut(s) | 578, 736, 1150 |
| Tru1I | TTAA | 1 cut(s) | 1271 |
| Tru9I | TTAA | 1 cut(s) | 1271 |
| TscAI | CASTG | 5 cut(s) | 132, 181, 1026, 1270, 1544 |
| TseFI | GTSAC | 4 cut(s) | 142, 1017, 1361, 1569 |
| Tsp45I | GTSAC | 4 cut(s) | 142, 1017, 1361, 1569 |
| TspDTI | ATGAA | 7 cut(s) | 172, 1159, 1271, 1288, 1316, 1410, 1605 |
| TspRI | CASTG | 5 cut(s) | 132, 181, 1026, 1270, 1544 |
| VpaK11BI | GGWCC | 4 cut(s) | 56, 149, 250, 370 |
| XapI | RAATTY | 1 cut(s) | 1441 |
| XbaI | TCTAGA | 2 cut(s) | 670, 985 |
| XceI | RCATGY | 1 cut(s) | 1048 |
| XmiI | GTMKAC | 2 cut(s) | 826, 1480 |
| XspI | CTAG | 4 cut(s) | 242, 671, 986, 1410 |
| ZrmI | AGTACT | 1 cut(s) | 1062 |
| Zsp2I | ATGCAT | 2 cut(s) | 1046, 1376 |