RLG00000001368

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
14734340 .. 14740191
5852 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001368

Sequence Viewer

Length: 1791 bp
ATGAATGGTGGGAGGAACTACGCTGTCCCAGATGCTACAAGTCACAAACCTATATTTGCCATGCTCCTGCCGCCTCCCAAAGTGACTGGTGCCCTTCAGTTAGGCCATGCTCTTACTGCTGCTATTGAGGACACTATGATTCGTCATCGGAGAATGTCAGGTTATAACACCTTGTGGCCACCTGGACTTGACCATGCTGGTATAGCAACACAGGTTGTTGTGGAAAAGAAGCTAATGCGTGAAAGCGGTAAAACCAGACATGATATCGGTCGTGAGGAATTTATCTCTAAAGTTTGGGATTGGAAAATTGAGTATGGGGGCACCATTTTACAGCAGCTACGTCGTTTGGGTGCTTCTTTAGATTGGTCCCGTGAGTGCTTTACAATGGATGAGAAAAGTTCAAAGGCCGTTGCAGAAGCTTTTGTTAGGCTACATAATCAAGGACTCATCTACAGGGATAATCGCATAGTGAACTGGGATTGTGTGTTGCGGACCGCAATATCTGATATTGAGGTGGATCCTCCAATTGAAATAAAAGAAAGGACACTACTAGAAGTTCCTGGATATGAGAACCCTGTTGAATTTGGTGTTTTGACTTTATTTGCATATCCTGTGGAAGAAGATTTAGGTGAGATAGTTGTAGCCACTACCCGAATAGAGACGATGCTTGGTGATACTGCTATTGCAGTGCATCCTGATGACGAAAGATATAAGCATCTTCATGGAAAACATGCAATCCATCCATTTAATGGAAGAAGGATTCCTATAATAAGTGATGAAATTCTTGTTGATCCAGAGTTTGGGACTGGTGCTGTCAAGATTACCCCGGCCCAAGATCCTAATGACTTTATGGTTGGGAAGCGCCATAATCTTGAGTTTATCAATATCTTTACTGATGATGGAAAAATTAACCAGTATATGGGGGAGCATTTGAAGGGATGCCACGCTTCAGGCCTCTTCAAAGAAACTAAGACCAATGAGACGTGTCTTAGAATTTGCTCTAGAAGTAAAGATGTTGTGGAGCCTATGATAAAGCCCCAGTGGTACATTAAATGCAGCGATATGGGAAATGAAGCTCTCAATGCTGTCGCTGATGATGAAAATAGGAAGCTGGAGATTATCCCAAGACAGTATACTGCTGAATGGAAGAGATGGCTTCATAGCATTAGTGATTGGTGTGTCTCGAGGCAACTTTGGTGGGGTCACCGTGTTCCGGCATGTGAGGAAGAGGCTCAAGCATTGGCTGATAAAAAATATGAGGGAAAGAAGTTTCGATTAGAACAGGACTCCGATGTGCTTGACACGTGGTTTTCGTCTGGTCTTTTCCCATTGTCTGTGTTGGGCTGGCCGGATGATACAAAAGATTTAAGAACCTTTTATCCAAAGTCAGTTGTTGAAACTGGGCACGACATTCTCTTTTTCTGGGTTGCTCGTATGGTAATGCTTGGAATGATATTGGGTGATGTGTTGCCATTCAGTTGCCGATGGATTCTCTCAGTGCTAAATGAAGCCATATCCAAAACTGTTATGTCATTGGAATCATTTGAGTTCTCAGATGCAGCAACTGCTGTTTATGCTTGGTGGCAGTACCAGCTGTGTGATGTCTTCATTGAAACTGTCAAACCTTACTTTTCTGGTAATGATCCAAAGTTTGCAACAGAGAGGGGTTTTGCATTGGACACTCTATGGATGCAACACATTTTCGATCATGAGAACAAAAAATATCCATTTTCCCTTGCAAACTGCAAAGCAAAGCACAAAATTGCACTGAGAATGCAACTTGTTGGATAG

Protein Analysis

597

Amino Acids

68.19

Weight (kDa)

5.89

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 12 - 411 5.5e-81 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1_2 PF13603 241 - 305 7.5e-07 Leucyl-tRNA synthetase, editing domain
tRNA-synt_1 PF00133 416 - 493 4.1e-22 tRNA synthetases class I (I, L, M and V)
Anticodon_1 PF08264 495 - 552 1.4e-10 Anticodon-binding domain of tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 165
AccB1I GGYRCC 2 cut(s) 89, 320
AccB7I CCANNNNNTGG 3 cut(s) 749, 800, 919
AccI GTMKAC 1 cut(s) 1133
AciI CCGC 4 cut(s) 71, 246, 490, 495
AclWI GGATC 5 cut(s) 512, 525, 785, 830, 1637
AcoI YGGCCR 2 cut(s) 176, 1346
AcsI RAATTY 4 cut(s) 278, 581, 780, 993
AcuI CTGAAG 2 cut(s) 80, 933
AcvI CACGTG 1 cut(s) 1305
AdeI CACNNNGTG 1 cut(s) 174
AfaI GTAC 2 cut(s) 1046, 1589
AfiI CCNNNNNNNGG 4 cut(s) 749, 800, 919, 1213
AflIII ACRYGT 2 cut(s) 983, 1302
AgsI TTSAA 7 cut(s) 402, 530, 581, 934, 961, 1397, 1613
AjiI CACGTC 1 cut(s) 984
AjnI CCWGG 2 cut(s) 181, 559
AloI GAACNNNNNNTCC 2 cut(s) 1363, 1395
AluBI AGCT 6 cut(s) 232, 337, 419, 1076, 1111, 1594
AluI AGCT 6 cut(s) 232, 337, 419, 1076, 1111, 1594
Alw26I GTCTC 3 cut(s) 653, 974, 1186
AlwI GGATC 5 cut(s) 512, 525, 785, 830, 1637
AlwNI CAGNNNCTG 1 cut(s) 1565
Ama87I CYCGRG 1 cut(s) 1183
AoxI GGCC 6 cut(s) 103, 176, 405, 828, 952, 1346
ApeKI GCWGC 4 cut(s) 119, 334, 1056, 1559
ApoI RAATTY 4 cut(s) 278, 581, 780, 993
AspLEI GCGC 1 cut(s) 864
AspS9I GGNCC 3 cut(s) 366, 492, 829
AsuC2I CCSGG 1 cut(s) 827
AsuHPI GGTGA 4 cut(s) 641, 683, 1196, 1472
AvaI CYCGRG 1 cut(s) 1183
AvaII GGWCC 2 cut(s) 366, 492
BaeGI GKGCMC 3 cut(s) 94, 323, 1407
BalI TGGCCA 1 cut(s) 178
BamHI GGATCC 1 cut(s) 517
BanI GGYRCC 2 cut(s) 89, 320
BbrPI CACGTG 1 cut(s) 1305
BbsI GAAGAC 1 cut(s) 1597
BbvI GCAGC 4 cut(s) 106, 346, 1068, 1571
BccI CCATC 4 cut(s) 747, 893, 1146, 1479
BceAI ACGGC 1 cut(s) 392
BcgI CGANNNNNNTGC 2 cut(s) 323, 357
BciT130I CCWGG 2 cut(s) 183, 561
BcnI CCSGG 1 cut(s) 827
BcoDI GTCTC 3 cut(s) 653, 974, 1186
BfaI CTAG 2 cut(s) 551, 1002
BfmI CTRYAG 1 cut(s) 451
BfoI RGCGCY 1 cut(s) 865
BisI GCNGC 5 cut(s) 71, 120, 335, 1057, 1560
BlsI GCNGC 5 cut(s) 72, 121, 336, 1058, 1561
Bme1390I CCNGG 3 cut(s) 183, 561, 827
Bme18I GGWCC 2 cut(s) 366, 492
BmeT110I CYCGRG 1 cut(s) 1183
BmgBI CACGTC 1 cut(s) 984
BmgT120I GGNCC 3 cut(s) 366, 492, 829
BmiI GGNNCC 5 cut(s) 91, 322, 368, 519, 1023
BmrFI CCNGG 3 cut(s) 183, 561, 827
BmrI ACTGGG 3 cut(s) 484, 1033, 1410
BmsI GCATC 7 cut(s) 22, 654, 700, 724, 929, 1546, 1680
BmuI ACTGGG 3 cut(s) 484, 1033, 1410
BpiI GAAGAC 1 cut(s) 1597
BpmI CTGGAG 1 cut(s) 1133
BpuEI CTTGAG 2 cut(s) 893, 1218
BpuMI CCSGG 1 cut(s) 827
BsaAI YACGTR 1 cut(s) 1305
BsaJI CCNNGG 1 cut(s) 825
Bsc4I CCNNNNNNNGG 4 cut(s) 749, 800, 919, 1213
Bse1I ACTGG 6 cut(s) 91, 479, 811, 913, 1039, 1405
BseBI CCWGG 2 cut(s) 183, 561
BseDI CCNNGG 1 cut(s) 825
BseGI GGATG 6 cut(s) 394, 691, 739, 944, 1357, 1695
BseLI CCNNNNNNNGG 4 cut(s) 749, 800, 919, 1213
BseMII CTCAG 3 cut(s) 1509, 1566, 1760
BseNI ACTGG 6 cut(s) 91, 479, 811, 913, 1039, 1405
BseSI GKGCMC 3 cut(s) 94, 323, 1407
BseXI GCAGC 4 cut(s) 106, 346, 1068, 1571
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 6 cut(s) 105, 178, 407, 830, 954, 1348
BshNI GGYRCC 2 cut(s) 89, 320
BsiEI CGRYCG 1 cut(s) 271
BsiHKCI CYCGRG 1 cut(s) 1183
BsiSI CCGG 3 cut(s) 827, 1214, 1349
BslFI GGGAC 3 cut(s) 11, 352, 817
BslI CCNNNNNNNGG 4 cut(s) 749, 800, 919, 1213
BsmAI GTCTC 3 cut(s) 653, 974, 1186
BsmBI CGTCTC 2 cut(s) 653, 974
BsmFI GGGAC 3 cut(s) 11, 352, 817
BsmI GAATGC 1 cut(s) 1779
BsnI GGCC 6 cut(s) 105, 178, 407, 830, 954, 1348
BsoBI CYCGRG 1 cut(s) 1183
Bsp1286I GDGCHC 3 cut(s) 94, 323, 1407
Bsp143I GATC 5 cut(s) 517, 790, 835, 1642, 1705
BspACI CCGC 4 cut(s) 71, 246, 490, 495
BspANI GGCC 6 cut(s) 105, 178, 407, 830, 954, 1348
BspCNI CTCAG 3 cut(s) 1508, 1565, 1761
BspHI TCATGA 1 cut(s) 1708
BspLI GGNNCC 5 cut(s) 91, 322, 368, 519, 1023
BspPI GGATC 5 cut(s) 512, 525, 785, 830, 1637
BspT107I GGYRCC 2 cut(s) 89, 320
BsrI ACTGG 6 cut(s) 91, 479, 811, 913, 1039, 1405
BssECI CCNNGG 1 cut(s) 825
BssMI GATC 5 cut(s) 517, 790, 835, 1642, 1705
BssNAI GTATAC 1 cut(s) 1134
Bst1107I GTATAC 1 cut(s) 1134
Bst2UI CCWGG 2 cut(s) 183, 561
Bst4CI ACNGT 4 cut(s) 1131, 1208, 1525, 1618
Bst6I CTCTTC 3 cut(s) 962, 1142, 1221
BstAPI GCANNNNNTGC 1 cut(s) 1565
BstBAI YACGTR 1 cut(s) 1305
BstC8I GCNNGC 1 cut(s) 1346
BstDEI CTNAG 5 cut(s) 969, 989, 1495, 1552, 1769
BstEII GGTNACC 1 cut(s) 1202
BstF5I GGATG 6 cut(s) 394, 691, 739, 944, 1357, 1695
BstH2I RGCGCY 1 cut(s) 865
BstHHI GCGC 1 cut(s) 864
BstKTI GATC 5 cut(s) 520, 793, 838, 1645, 1708
BstMAI GTCTC 3 cut(s) 653, 974, 1186
BstMBI GATC 5 cut(s) 517, 790, 835, 1642, 1705
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 7 cut(s) 70, 116, 203, 1082, 1565, 1574, 1591
BstNI CCWGG 2 cut(s) 183, 561
BstNSI RCATGY 2 cut(s) 734, 1221
BstPI GGTNACC 1 cut(s) 1202
BstSCI CCNGG 3 cut(s) 181, 559, 825
BstSFI CTRYAG 1 cut(s) 451
BstSLI GKGCMC 3 cut(s) 94, 323, 1407
BstV1I GCAGC 4 cut(s) 106, 346, 1068, 1571
BstV2I GAAGAC 1 cut(s) 1597
BstX2I RGATCY 2 cut(s) 517, 835
BstYI RGATCY 2 cut(s) 517, 835
BstZ17I GTATAC 1 cut(s) 1134
BsuRI GGCC 6 cut(s) 105, 178, 407, 830, 954, 1348
BtrI CACGTC 1 cut(s) 984
BtsCI GGATG 6 cut(s) 394, 691, 739, 944, 1357, 1695
BtsI GCAGTG 1 cut(s) 693
BtsIMutI CAGTG 4 cut(s) 693, 1046, 1503, 1766
Cac8I GCNNGC 1 cut(s) 1346
CaiI CAGNNNCTG 1 cut(s) 1565
CciI TCATGA 1 cut(s) 1708
CfoI GCGC 1 cut(s) 864
Cfr13I GGNCC 3 cut(s) 366, 492, 829
CpoI CGGWCCG 1 cut(s) 492
Csp6I GTAC 2 cut(s) 1045, 1588
CspCI CAANNNNNGTGG 2 cut(s) 1178, 1213
CspI CGGWCCG 1 cut(s) 492
CviAII CATG 8 cut(s) 61, 107, 194, 260, 722, 731, 1218, 1709
CviQI GTAC 2 cut(s) 1045, 1588
DdeI CTNAG 5 cut(s) 969, 989, 1495, 1552, 1769
DpnI GATC 5 cut(s) 519, 792, 837, 1644, 1707
DpnII GATC 5 cut(s) 517, 790, 835, 1642, 1705
DraIII CACNNNGTG 1 cut(s) 174
EaeI YGGCCR 2 cut(s) 176, 1346
Eam1104I CTCTTC 3 cut(s) 962, 1142, 1221
EarI CTCTTC 3 cut(s) 962, 1142, 1221
Eco147I AGGCCT 1 cut(s) 954
Eco32I GATATC 1 cut(s) 265
Eco47I GGWCC 2 cut(s) 366, 492
Eco57I CTGAAG 2 cut(s) 80, 933
Eco72I CACGTG 1 cut(s) 1305
Eco88I CYCGRG 1 cut(s) 1183
Eco91I GGTNACC 1 cut(s) 1202
EcoO65I GGTNACC 1 cut(s) 1202
EcoRII CCWGG 2 cut(s) 181, 559
EcoRV GATATC 1 cut(s) 265
Esp3I CGTCTC 2 cut(s) 653, 974
FaeI CATG 8 cut(s) 64, 110, 197, 263, 725, 734, 1221, 1712
FaqI GGGAC 3 cut(s) 11, 352, 817
FatI CATG 8 cut(s) 60, 106, 193, 259, 721, 730, 1217, 1708
FblI GTMKAC 1 cut(s) 1133
Fnu4HI GCNGC 5 cut(s) 71, 120, 335, 1057, 1560
FokI GGATG 6 cut(s) 401, 678, 726, 951, 1364, 1702
Fsp4HI GCNGC 5 cut(s) 71, 120, 335, 1057, 1560
FspBI CTAG 2 cut(s) 551, 1002
GlaI GCGC 1 cut(s) 863
GluI GCNGC 5 cut(s) 71, 120, 335, 1057, 1560
GsuI CTGGAG 1 cut(s) 1133
HaeII RGCGCY 1 cut(s) 865
HaeIII GGCC 6 cut(s) 105, 178, 407, 830, 954, 1348
HapII CCGG 3 cut(s) 827, 1214, 1349
HhaI GCGC 1 cut(s) 864
Hin1II CATG 8 cut(s) 64, 110, 197, 263, 725, 734, 1221, 1712
Hin6I GCGC 1 cut(s) 862
HinP1I GCGC 1 cut(s) 862
HindIII AAGCTT 1 cut(s) 417
HinfI GANTC 6 cut(s) 139, 444, 760, 1286, 1489, 1538
HpaII CCGG 3 cut(s) 827, 1214, 1349
HphI GGTGA 4 cut(s) 641, 683, 1196, 1472
Hpy166II GTNNAC 2 cut(s) 472, 1134
Hpy188I TCNGA 4 cut(s) 150, 505, 1291, 1555
Hpy188III TCNNGA 8 cut(s) 272, 695, 794, 817, 872, 1002, 1183, 1709
Hpy8I GTNNAC 2 cut(s) 472, 1134
Hpy99I CGWCG 1 cut(s) 345
HpyAV CCTTC 3 cut(s) 104, 750, 928
HpyCH4III ACNGT 4 cut(s) 1131, 1208, 1525, 1618
HpyCH4IV ACGT 3 cut(s) 340, 983, 1304
HpyF10VI GCNNNNNNNGC 7 cut(s) 70, 116, 203, 1082, 1565, 1574, 1591
HpyF3I CTNAG 5 cut(s) 969, 989, 1495, 1552, 1769
HpySE526I ACGT 3 cut(s) 340, 983, 1304
Hsp92II CATG 8 cut(s) 64, 110, 197, 263, 725, 734, 1221, 1712
HspAI GCGC 1 cut(s) 862
Kzo9I GATC 5 cut(s) 517, 790, 835, 1642, 1705
LmnI GCTCC 3 cut(s) 69, 925, 1021
Lsp1109I GCAGC 4 cut(s) 106, 346, 1068, 1571
LweI GCATC 7 cut(s) 22, 654, 700, 724, 929, 1546, 1680
MaeI CTAG 2 cut(s) 551, 1002
MaeII ACGT 3 cut(s) 340, 983, 1304
MaeIII GTNAC 3 cut(s) 41, 82, 1202
MalI GATC 5 cut(s) 519, 792, 837, 1644, 1707
MboI GATC 5 cut(s) 517, 790, 835, 1642, 1705
MboII GAAGA 8 cut(s) 629, 632, 710, 765, 949, 1159, 1238, 1597
MfeI CAATTG 1 cut(s) 525
MflI RGATCY 2 cut(s) 517, 835
MhlI GDGCHC 3 cut(s) 94, 323, 1407
MlsI TGGCCA 1 cut(s) 178
MluCI AATT 8 cut(s) 278, 306, 525, 581, 780, 906, 993, 1761
MluNI TGGCCA 1 cut(s) 178
MlyI GAGTC 2 cut(s) 438, 1280
MmeI TCCRAC 1 cut(s) 1765
Mox20I TGGCCA 1 cut(s) 178
MscI TGGCCA 1 cut(s) 178
MseI TTAA 4 cut(s) 747, 909, 1050, 1367
MslI CAYNNNNRTG 2 cut(s) 696, 720
Msp20I TGGCCA 1 cut(s) 178
MspA1I CMGCKG 1 cut(s) 1594
MspI CCGG 3 cut(s) 827, 1214, 1349
MspR9I CCNGG 3 cut(s) 183, 561, 827
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1779
MvaI CCWGG 2 cut(s) 183, 561
MwoI GCNNNNNNNGC 7 cut(s) 70, 116, 203, 1082, 1565, 1574, 1591
NciI CCSGG 1 cut(s) 827
NdeII GATC 5 cut(s) 517, 790, 835, 1642, 1705
NlaIII CATG 8 cut(s) 64, 110, 197, 263, 725, 734, 1221, 1712
NlaIV GGNNCC 5 cut(s) 91, 322, 368, 519, 1023
NmuCI GTSAC 3 cut(s) 41, 82, 1202
NspI RCATGY 2 cut(s) 734, 1221
PaeR7I CTCGAG 1 cut(s) 1183
PagI TCATGA 1 cut(s) 1708
PceI AGGCCT 1 cut(s) 954
PcsI WCGNNNNNNNCGW 1 cut(s) 1310
PctI GAATGC 1 cut(s) 1779
PfeI GAWTC 4 cut(s) 139, 760, 1489, 1538
PflMI CCANNNNNTGG 3 cut(s) 749, 800, 919
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 5 cut(s) 72, 121, 336, 1058, 1561
PleI GAGTC 2 cut(s) 438, 1280
PmaCI CACGTG 1 cut(s) 1305
PmlI CACGTG 1 cut(s) 1305
PpsI GAGTC 2 cut(s) 438, 1280
Ppu21I YACGTR 1 cut(s) 1305
PsiI TTATAA 1 cut(s) 165
Psp6I CCWGG 2 cut(s) 181, 559
PspCI CACGTG 1 cut(s) 1305
PspEI GGTNACC 1 cut(s) 1202
PspGI CCWGG 2 cut(s) 181, 559
PspN4I GGNNCC 5 cut(s) 91, 322, 368, 519, 1023
PspPI GGNCC 3 cut(s) 366, 492, 829
PstNI CAGNNNCTG 1 cut(s) 1565
PsuI RGATCY 2 cut(s) 517, 835
PvuII CAGCTG 1 cut(s) 1594
RsaI GTAC 2 cut(s) 1046, 1589
RsaNI GTAC 2 cut(s) 1045, 1588
RseI CAYNNNNRTG 2 cut(s) 696, 720
Rsr2I CGGWCCG 1 cut(s) 492
RsrII CGGWCCG 1 cut(s) 492
SaqAI TTAA 4 cut(s) 747, 909, 1050, 1367
SatI GCNGC 5 cut(s) 71, 120, 335, 1057, 1560
Sau3AI GATC 5 cut(s) 517, 790, 835, 1642, 1705
Sau96I GGNCC 3 cut(s) 366, 492, 829
SchI GAGTC 2 cut(s) 438, 1280
ScrFI CCNGG 3 cut(s) 183, 561, 827
SduI GDGCHC 3 cut(s) 94, 323, 1407
SfaNI GCATC 7 cut(s) 22, 654, 700, 724, 929, 1546, 1680
SfcI CTRYAG 1 cut(s) 451
Sfr274I CTCGAG 1 cut(s) 1183
SinI GGWCC 2 cut(s) 366, 492
SlaI CTCGAG 1 cut(s) 1183
SmiMI CAYNNNNRTG 2 cut(s) 696, 720
SmlI CTYRAG 3 cut(s) 872, 1183, 1233
SmoI CTYRAG 3 cut(s) 872, 1183, 1233
Sse9I AATT 8 cut(s) 278, 306, 525, 581, 780, 906, 993, 1761
SseBI AGGCCT 1 cut(s) 954
SsiI CCGC 4 cut(s) 71, 246, 490, 495
SspMI CTAG 2 cut(s) 551, 1002
StuI AGGCCT 1 cut(s) 954
StyD4I CCNGG 3 cut(s) 181, 559, 825
TaaI ACNGT 4 cut(s) 1131, 1208, 1525, 1618
TaiI ACGT 3 cut(s) 343, 986, 1307
TaqI TCGA 3 cut(s) 1184, 1273, 1704
TaqII GACCGA 1 cut(s) 257
TasI AATT 8 cut(s) 278, 306, 525, 581, 780, 906, 993, 1761
TauI GCSGC 1 cut(s) 73
TfiI GAWTC 4 cut(s) 139, 760, 1489, 1538
Tru1I TTAA 4 cut(s) 747, 909, 1050, 1367
Tru9I TTAA 4 cut(s) 747, 909, 1050, 1367
TscAI CASTG 4 cut(s) 693, 1046, 1503, 1773
TseFI GTSAC 3 cut(s) 41, 82, 1202
TseI GCWGC 4 cut(s) 119, 334, 1056, 1559
Tsp45I GTSAC 3 cut(s) 41, 82, 1202
TspDTI ATGAA 8 cut(s) 17, 710, 792, 1086, 1113, 1148, 1521, 1597
TspRI CASTG 4 cut(s) 693, 1046, 1503, 1773
Van91I CCANNNNNTGG 3 cut(s) 749, 800, 919
VpaK11BI GGWCC 2 cut(s) 366, 492
XapI RAATTY 4 cut(s) 278, 581, 780, 993
XbaI TCTAGA 1 cut(s) 1001
XceI RCATGY 2 cut(s) 734, 1221
XcmI CCANNNNNNNNNTGG 1 cut(s) 746
XhoI CTCGAG 1 cut(s) 1183
XmiI GTMKAC 1 cut(s) 1133
XspI CTAG 2 cut(s) 551, 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.