RchiOBHm_Chr7g0232251

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
56230962 .. 56235264
4303 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20816

Sequence Viewer

Length: 1857 bp
ATGGTTGGGAAGCGCCATAATCTTGAGTTTATCAACATCTTTACTGATGATGGAAAAATAAACCAGTATGGGGGAGCATTTGAAGGGATGCCACGCTTCAGAGCCCGAGAGGCTGTGACTGATGCATTAAAGAAGAAGGGCCTCTTCAAAGAAACAAAGACCAATGAGATGTGTCTTAGAATTTGCTCTAGAAGTAAAGATGTTGTGGAGCCTATGATAAAGCCCCAGTGGTACATTAAATGCAGTGATATGGGAAATGAAGCTCTCAATGCTGTCGCTGATGATGAAAATAGGAAGCTGGAGATTATCCCAAGACAGTATACTGCTGAGTGGAAGAGATGGCTTCATAACATTACTGATTGGTGTGTCTCGAGGCAACTTTGGTGGGGTCACCGTGTTCCAGCATGGTATGTTGTTTTTGAGGGTGATGACAACGAAGAATTTGGAAAAGTTTTTGAGCGATGGTTGGTTGCTAGAAGTGAGGAAGAAGCTCAAGCATTGGCCGATCAAAAATATGAGGGAAAGAAGTTTCGATTAGAACAGGACTCAGATGTGCTTGACACGTGGTTTTCGTCTGGGCTTTTCCCATTGTTTGCATTGGGCTGGCCGGATGATACAGATGATTTCAAAACTTTTTATCCAAATTCAGTTGTTGAAACTGGGCACGACATTCTCTTTTTCTGGGTTTCTCGTATGGTGATGCTTGGAATTACATTGGGTGGTAATGTTCCCTTTACAAAGGTATACTTACACCCAATGGTTAGAGATGCACACGGGCGTAAAATGTCAAAGGGCTTGGGGAATGTCATTGACCCTGTTGACATAATAAATGGTATCACCCTAGAACGTCTACATGATAGACTTTTAGAAGGAAATCTGGACCCCAAGGAATTAGATAAGGCCAGAGAGGGACTATTAAAGGACTTCCCTGATGGTATTCCTGAGTGTGGTGCGGATGCTCTGCGGTTTTCTCTTATCTCGTACACTGCTCAGTCCGATAAGATAAATCTGGATGTCCAAAGGGTTGTGGGTTACTGTCAGTGGTGTAACAAACTTTGGAATGCAGTGCGATTTGGTTTGAGTATACTTGGGGATGATTATGTTCCGCCCTCAAATGTAAATCCAGATGTGTTGCCATTCAGTTGCCAATGGATTCTCTCAGTGCTAAATGAAGCCATATCCAAAACTGTTATGTCATTGGAATCATACGAGTTCTCAGATGCAGCAACTGCTGTTTATGCTTGGTGGCAGTACCAGCTGTGTGATGTCTTCATTGAGACTATCAAACCTTACTTTTCTGGCAATGATCCAAAGTTTGCAACAGAGAGGGGTTTTGCACGGGACACTCTGTGGGTATGTCTTGACAATGGCCTGAGGTTACTTCATCCTTTCATGCCATATGTGACAGAAGAACTGTGGCAACGTCTGCCGTCGCCAGGGCATTACAAAAGGGCATCATCAATTATGATGAGCGAGTACCCATTGATCATAGAGAGCTGGAAAAATGAAAGGGTGGAGCTTGATATGTCTCTTATTGAGTTGGTTGTGAAGTCTCTCCGATCTCTTGCCCAGGGAAGTCGTGAAAGGAGACAAGGTTATGTGCTTTGTAGAGCAAGTTTGGGAAAGTGCGACCAGGAGGCAATATGCAATCATCAACTGGAAATTAAAACGCTTGCTAATGTGTCGTCTTTGACGGTAATCGATGAGAACAATGCTGCTCCAACTAGATGTGCGGTGTCTGTTGTGAATGAAAAGCTTTCTGTTTATCTCAAGCTTCATGCATCTGTTCTTCAGAAACAGATCTTGAAAAGATCCGGAAAAGGATTGAATACATTACATGGTAAGCTATCTCAATAG

Protein Analysis

618

Amino Acids

70.8

Weight (kDa)

5.94

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 64 - 337 3.2e-71 tRNA synthetases class I (I, L, M and V)
Anticodon_1 PF08264 383 - 522 5.4e-31 Anticodon-binding domain of tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 320, 744, 850, 1084
AccIII TCCGGA 1 cut(s) 1814
AciI CCGC 4 cut(s) 953, 964, 1106, 1733
AclWI GGATC 2 cut(s) 1301, 1806
AcoI YGGCCR 2 cut(s) 501, 605
AcsI RAATTY 3 cut(s) 180, 440, 643
AcuI CTGAAG 2 cut(s) 82, 1775
AcvI CACGTG 1 cut(s) 564
AdeI CACNNNGTG 1 cut(s) 1350
AfaI GTAC 4 cut(s) 233, 983, 1253, 1478
AfiI CCNNNNNNNGG 3 cut(s) 70, 947, 1436
AflIII ACRYGT 1 cut(s) 561
AgsI TTSAA 6 cut(s) 83, 148, 628, 656, 1807, 1828
AjnI CCWGG 3 cut(s) 1435, 1569, 1632
AluBI AGCT 9 cut(s) 263, 298, 491, 1258, 1497, 1519, 1756, 1774, 1846
AluI AGCT 9 cut(s) 263, 298, 491, 1258, 1497, 1519, 1756, 1774, 1846
Alw26I GTCTC 5 cut(s) 373, 1271, 1533, 1557, 1582
AlwI GGATC 2 cut(s) 1301, 1806
AlwNI CAGNNNCTG 1 cut(s) 1229
Ama87I CYCGRG 2 cut(s) 105, 370
Aor13HI TCCGGA 1 cut(s) 1814
AoxI GGCC 5 cut(s) 139, 501, 605, 900, 1369
ApeKI GCWGC 2 cut(s) 1223, 1715
ApoI RAATTY 3 cut(s) 180, 440, 643
AspLEI GCGC 1 cut(s) 15
AspS9I GGNCC 2 cut(s) 139, 880
AsuHPI GGTGA 4 cut(s) 383, 437, 709, 829
AvaI CYCGRG 2 cut(s) 105, 370
AvaII GGWCC 1 cut(s) 880
AxyI CCTNAGG 1 cut(s) 1373
BaeGI GKGCMC 1 cut(s) 666
BanII GRGCYC 1 cut(s) 106
BbrPI CACGTG 1 cut(s) 564
BbsI GAAGAC 1 cut(s) 1261
BbvI GCAGC 2 cut(s) 1235, 1702
BccI CCATC 4 cut(s) 44, 333, 456, 926
BceAI ACGGC 1 cut(s) 1414
BciT130I CCWGG 3 cut(s) 1437, 1571, 1634
BclI TGATCA 1 cut(s) 1485
BcoDI GTCTC 5 cut(s) 373, 1271, 1533, 1557, 1582
BfaI CTAG 4 cut(s) 189, 474, 842, 1725
BfoI RGCGCY 1 cut(s) 16
BglI GCCNNNNNGGC 1 cut(s) 110
BglII AGATCT 1 cut(s) 1800
BisI GCNGC 2 cut(s) 1224, 1716
BlsI GCNGC 2 cut(s) 1225, 1717
Bme1390I CCNGG 3 cut(s) 1437, 1571, 1634
Bme18I GGWCC 1 cut(s) 880
BmeT110I CYCGRG 2 cut(s) 105, 370
BmgT120I GGNCC 2 cut(s) 139, 880
BmiI GGNNCC 2 cut(s) 210, 882
BmrFI CCNGG 3 cut(s) 1437, 1571, 1634
BmrI ACTGGG 2 cut(s) 220, 669
BmsI GCATC 8 cut(s) 78, 112, 690, 757, 946, 1210, 1463, 1790
BmuI ACTGGG 2 cut(s) 220, 669
BpiI GAAGAC 1 cut(s) 1261
BpmI CTGGAG 1 cut(s) 320
BpuEI CTTGAG 3 cut(s) 44, 477, 1754
Bsa29I ATCGAT 1 cut(s) 1701
BsaAI YACGTR 1 cut(s) 564
BsaJI CCNNGG 4 cut(s) 885, 1436, 1569, 1570
BsaWI WCCGGW 1 cut(s) 1814
BsaXI ACNNNNNCTCC 2 cut(s) 1579, 1609
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 947, 1436
Bse1I ACTGG 4 cut(s) 64, 226, 664, 1662
Bse21I CCTNAGG 1 cut(s) 1373
Bse3DI GCAATG 1 cut(s) 1309
BseAI TCCGGA 1 cut(s) 1814
BseBI CCWGG 3 cut(s) 1437, 1571, 1634
BseCI ATCGAT 1 cut(s) 1701
BseDI CCNNGG 4 cut(s) 885, 1436, 1569, 1570
BseGI GGATG 6 cut(s) 93, 616, 961, 1018, 1099, 1384
BseLI CCNNNNNNNGG 3 cut(s) 70, 947, 1436
BseMI GCAATG 1 cut(s) 1309
BseMII CTCAG 7 cut(s) 318, 561, 933, 1004, 1173, 1230, 1364
BseNI ACTGG 4 cut(s) 64, 226, 664, 1662
BseSI GKGCMC 1 cut(s) 666
BseXI GCAGC 2 cut(s) 1235, 1702
BshFI GGCC 5 cut(s) 141, 503, 607, 902, 1371
BshVI ATCGAT 1 cut(s) 1701
BsiHKCI CYCGRG 2 cut(s) 105, 370
BsiSI CCGG 2 cut(s) 608, 1815
BslFI GGGAC 2 cut(s) 924, 1355
BslI CCNNNNNNNGG 3 cut(s) 70, 947, 1436
BsmAI GTCTC 5 cut(s) 373, 1271, 1533, 1557, 1582
BsmFI GGGAC 2 cut(s) 924, 1355
BsmI GAATGC 1 cut(s) 1066
BsnI GGCC 5 cut(s) 141, 503, 607, 902, 1371
BsoBI CYCGRG 2 cut(s) 105, 370
Bsp1286I GDGCHC 2 cut(s) 106, 666
Bsp13I TCCGGA 1 cut(s) 1814
Bsp143I GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
BspACI CCGC 4 cut(s) 953, 964, 1106, 1733
BspANI GGCC 5 cut(s) 141, 503, 607, 902, 1371
BspCNI CTCAG 7 cut(s) 319, 560, 934, 1003, 1172, 1229, 1365
BspDI ATCGAT 1 cut(s) 1701
BspEI TCCGGA 1 cut(s) 1814
BspLI GGNNCC 2 cut(s) 210, 882
BspPI GGATC 2 cut(s) 1301, 1806
BsrDI GCAATG 1 cut(s) 1309
BsrI ACTGG 4 cut(s) 64, 226, 664, 1662
BssECI CCNNGG 4 cut(s) 885, 1436, 1569, 1570
BssMI GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
BssNAI GTATAC 3 cut(s) 321, 745, 1085
BssT1I CCWWGG 1 cut(s) 885
Bst1107I GTATAC 3 cut(s) 321, 745, 1085
Bst2UI CCWGG 3 cut(s) 1437, 1571, 1634
Bst4CI ACNGT 6 cut(s) 318, 395, 1037, 1189, 1416, 1696
Bst6I CTCTTC 2 cut(s) 149, 329
BstAPI GCANNNNNTGC 2 cut(s) 1229, 1426
BstBAI YACGTR 1 cut(s) 564
BstC8I GCNNGC 2 cut(s) 605, 1674
BstDEI CTNAG 8 cut(s) 176, 327, 547, 942, 990, 1159, 1216, 1373
BstEII GGTNACC 1 cut(s) 389
BstF5I GGATG 6 cut(s) 93, 616, 961, 1018, 1099, 1384
BstH2I RGCGCY 1 cut(s) 16
BstHHI GCGC 1 cut(s) 15
BstKTI GATC 6 cut(s) 508, 1309, 1488, 1562, 1803, 1814
BstMAI GTCTC 5 cut(s) 373, 1271, 1533, 1557, 1582
BstMBI GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
BstMWI GCNNNNNNNGC 6 cut(s) 110, 269, 1229, 1238, 1255, 1426
BstNI CCWGG 3 cut(s) 1437, 1571, 1634
BstPI GGTNACC 1 cut(s) 389
BstSCI CCNGG 3 cut(s) 1435, 1569, 1632
BstSLI GKGCMC 1 cut(s) 666
BstV1I GCAGC 2 cut(s) 1235, 1702
BstV2I GAAGAC 1 cut(s) 1261
BstX2I RGATCY 2 cut(s) 1800, 1811
BstYI RGATCY 2 cut(s) 1800, 1811
BstZ17I GTATAC 3 cut(s) 321, 745, 1085
Bsu15I ATCGAT 1 cut(s) 1701
Bsu36I CCTNAGG 1 cut(s) 1373
BsuRI GGCC 5 cut(s) 141, 503, 607, 902, 1371
BsuTUI ATCGAT 1 cut(s) 1701
BtgZI GCGATG 1 cut(s) 475
BtsCI GGATG 6 cut(s) 93, 616, 961, 1018, 1099, 1384
BtsI GCAGTG 3 cut(s) 250, 984, 1071
BtsIMutI CAGTG 6 cut(s) 233, 250, 984, 1046, 1071, 1167
Cac8I GCNNGC 2 cut(s) 605, 1674
CaiI CAGNNNCTG 1 cut(s) 1229
CfoI GCGC 1 cut(s) 15
Cfr13I GGNCC 2 cut(s) 139, 880
ClaI ATCGAT 1 cut(s) 1701
Csp6I GTAC 4 cut(s) 232, 982, 1252, 1477
CspCI CAANNNNNGTGG 2 cut(s) 365, 400
CviAII CATG 5 cut(s) 405, 854, 1393, 1778, 1838
CviQI GTAC 4 cut(s) 232, 982, 1252, 1477
DdeI CTNAG 8 cut(s) 176, 327, 547, 942, 990, 1159, 1216, 1373
DpnI GATC 6 cut(s) 507, 1308, 1487, 1561, 1802, 1813
DpnII GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
DraIII CACNNNGTG 1 cut(s) 1350
EaeI YGGCCR 2 cut(s) 501, 605
Eam1104I CTCTTC 2 cut(s) 149, 329
EarI CTCTTC 2 cut(s) 149, 329
EciI GGCGGA 1 cut(s) 1095
Eco130I CCWWGG 1 cut(s) 885
Eco24I GRGCYC 1 cut(s) 106
Eco47I GGWCC 1 cut(s) 880
Eco57I CTGAAG 2 cut(s) 82, 1775
Eco72I CACGTG 1 cut(s) 564
Eco81I CCTNAGG 1 cut(s) 1373
Eco88I CYCGRG 2 cut(s) 105, 370
Eco91I GGTNACC 1 cut(s) 389
EcoO109I RGGNCCY 1 cut(s) 139
EcoO65I GGTNACC 1 cut(s) 389
EcoRII CCWGG 3 cut(s) 1435, 1569, 1632
EcoT14I CCWWGG 1 cut(s) 885
EcoT22I ATGCAT 2 cut(s) 127, 1783
EcoT38I GRGCYC 1 cut(s) 106
ErhI CCWWGG 1 cut(s) 885
FaeI CATG 5 cut(s) 408, 857, 1396, 1781, 1841
FalI AAGNNNNNCTT 4 cut(s) 128, 160, 731, 763
FaqI GGGAC 2 cut(s) 924, 1355
FatI CATG 5 cut(s) 404, 853, 1392, 1777, 1837
FauNDI CATATG 1 cut(s) 1399
FbaI TGATCA 1 cut(s) 1485
FblI GTMKAC 4 cut(s) 320, 744, 850, 1084
Fnu4HI GCNGC 2 cut(s) 1224, 1716
FokI GGATG 6 cut(s) 100, 623, 968, 1025, 1106, 1371
FriOI GRGCYC 1 cut(s) 106
Fsp4HI GCNGC 2 cut(s) 1224, 1716
FspBI CTAG 4 cut(s) 189, 474, 842, 1725
GlaI GCGC 1 cut(s) 14
GluI GCNGC 2 cut(s) 1224, 1716
GsuI CTGGAG 1 cut(s) 320
HaeII RGCGCY 1 cut(s) 16
HaeIII GGCC 5 cut(s) 141, 503, 607, 902, 1371
HapII CCGG 2 cut(s) 608, 1815
HhaI GCGC 1 cut(s) 15
Hin1II CATG 5 cut(s) 408, 857, 1396, 1781, 1841
Hin6I GCGC 1 cut(s) 13
HinP1I GCGC 1 cut(s) 13
HincII GTYRAC 1 cut(s) 820
HindII GTYRAC 1 cut(s) 820
HindIII AAGCTT 2 cut(s) 1754, 1772
HinfI GANTC 3 cut(s) 545, 1153, 1202
HpaII CCGG 2 cut(s) 608, 1815
HphI GGTGA 4 cut(s) 383, 437, 709, 829
Hpy166II GTNNAC 6 cut(s) 321, 745, 820, 851, 984, 1085
Hpy188I TCNGA 6 cut(s) 101, 550, 997, 1219, 1559, 1794
Hpy8I GTNNAC 6 cut(s) 321, 745, 820, 851, 984, 1085
Hpy99I CGWCG 1 cut(s) 1435
HpyAV CCTTC 3 cut(s) 77, 130, 863
HpyCH4III ACNGT 6 cut(s) 318, 395, 1037, 1189, 1416, 1696
HpyCH4IV ACGT 3 cut(s) 563, 847, 1423
HpyF10VI GCNNNNNNNGC 6 cut(s) 110, 269, 1229, 1238, 1255, 1426
HpyF3I CTNAG 8 cut(s) 176, 327, 547, 942, 990, 1159, 1216, 1373
HpySE526I ACGT 3 cut(s) 563, 847, 1423
Hsp92II CATG 5 cut(s) 408, 857, 1396, 1781, 1841
HspAI GCGC 1 cut(s) 13
Kpn2I TCCGGA 1 cut(s) 1814
Ksp22I TGATCA 1 cut(s) 1485
Kzo9I GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
LmnI GCTCC 4 cut(s) 74, 208, 1516, 1723
Lsp1109I GCAGC 2 cut(s) 1235, 1702
LweI GCATC 8 cut(s) 78, 112, 690, 757, 946, 1210, 1463, 1790
MaeI CTAG 4 cut(s) 189, 474, 842, 1725
MaeII ACGT 3 cut(s) 563, 847, 1423
MaeIII GTNAC 6 cut(s) 115, 389, 1031, 1046, 1377, 1402
MalI GATC 6 cut(s) 507, 1308, 1487, 1561, 1802, 1813
MboI GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
MboII GAAGA 8 cut(s) 136, 145, 346, 449, 497, 1261, 1421, 1781
MflI RGATCY 2 cut(s) 1800, 1811
MhlI GDGCHC 2 cut(s) 106, 666
MluCI AATT 7 cut(s) 180, 440, 643, 708, 890, 1461, 1662
MlyI GAGTC 1 cut(s) 539
MmeI TCCRAC 1 cut(s) 1745
Mph1103I ATGCAT 2 cut(s) 127, 1783
MroI TCCGGA 1 cut(s) 1814
MseI TTAA 4 cut(s) 128, 237, 917, 1665
MspA1I CMGCKG 1 cut(s) 1258
MspI CCGG 2 cut(s) 608, 1815
MspR9I CCNGG 3 cut(s) 1437, 1571, 1634
Mva1269I GAATGC 1 cut(s) 1066
MvaI CCWGG 3 cut(s) 1437, 1571, 1634
MwoI GCNNNNNNNGC 6 cut(s) 110, 269, 1229, 1238, 1255, 1426
NdeI CATATG 1 cut(s) 1399
NdeII GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
NlaIII CATG 5 cut(s) 408, 857, 1396, 1781, 1841
NlaIV GGNNCC 2 cut(s) 210, 882
NmuCI GTSAC 3 cut(s) 115, 389, 1402
NsiI ATGCAT 2 cut(s) 127, 1783
PaeR7I CTCGAG 1 cut(s) 370
PasI CCCWGGG 1 cut(s) 1570
PcsI WCGNNNNNNNCGW 1 cut(s) 569
PctI GAATGC 1 cut(s) 1066
PfeI GAWTC 2 cut(s) 1153, 1202
PkrI GCNGC 2 cut(s) 1225, 1717
PleI GAGTC 1 cut(s) 539
PmaCI CACGTG 1 cut(s) 564
PmlI CACGTG 1 cut(s) 564
PpsI GAGTC 1 cut(s) 539
Ppu21I YACGTR 1 cut(s) 564
Psp6I CCWGG 3 cut(s) 1435, 1569, 1632
PspCI CACGTG 1 cut(s) 564
PspEI GGTNACC 1 cut(s) 389
PspGI CCWGG 3 cut(s) 1435, 1569, 1632
PspN4I GGNNCC 2 cut(s) 210, 882
PspPI GGNCC 2 cut(s) 139, 880
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 2 cut(s) 1800, 1811
PvuII CAGCTG 1 cut(s) 1258
RsaI GTAC 4 cut(s) 233, 983, 1253, 1478
RsaNI GTAC 4 cut(s) 232, 982, 1252, 1477
SaqAI TTAA 4 cut(s) 128, 237, 917, 1665
SatI GCNGC 2 cut(s) 1224, 1716
Sau3AI GATC 6 cut(s) 505, 1306, 1485, 1559, 1800, 1811
Sau96I GGNCC 2 cut(s) 139, 880
SchI GAGTC 1 cut(s) 539
ScrFI CCNGG 3 cut(s) 1437, 1571, 1634
SduI GDGCHC 2 cut(s) 106, 666
SfaNI GCATC 8 cut(s) 78, 112, 690, 757, 946, 1210, 1463, 1790
Sfr274I CTCGAG 1 cut(s) 370
SinI GGWCC 1 cut(s) 880
SlaI CTCGAG 1 cut(s) 370
SmlI CTYRAG 4 cut(s) 23, 370, 492, 1769
SmoI CTYRAG 4 cut(s) 23, 370, 492, 1769
Sse9I AATT 7 cut(s) 180, 440, 643, 708, 890, 1461, 1662
SsiI CCGC 4 cut(s) 953, 964, 1106, 1733
SspMI CTAG 4 cut(s) 189, 474, 842, 1725
StyD4I CCNGG 3 cut(s) 1435, 1569, 1632
StyI CCWWGG 1 cut(s) 885
TaaI ACNGT 6 cut(s) 318, 395, 1037, 1189, 1416, 1696
TaiI ACGT 3 cut(s) 566, 850, 1426
TaqI TCGA 3 cut(s) 371, 532, 1701
TasI AATT 7 cut(s) 180, 440, 643, 708, 890, 1461, 1662
TfiI GAWTC 2 cut(s) 1153, 1202
Tru1I TTAA 4 cut(s) 128, 237, 917, 1665
Tru9I TTAA 4 cut(s) 128, 237, 917, 1665
TscAI CASTG 6 cut(s) 233, 250, 991, 1046, 1071, 1167
TseFI GTSAC 3 cut(s) 115, 389, 1402
TseI GCWGC 2 cut(s) 1223, 1715
Tsp45I GTSAC 3 cut(s) 115, 389, 1402
TspRI CASTG 6 cut(s) 233, 250, 991, 1046, 1071, 1167
VpaK11BI GGWCC 1 cut(s) 880
XapI RAATTY 3 cut(s) 180, 440, 643
XbaI TCTAGA 1 cut(s) 188
XhoI CTCGAG 1 cut(s) 370
XmiI GTMKAC 4 cut(s) 320, 744, 850, 1084
XspI CTAG 4 cut(s) 189, 474, 842, 1725
Zsp2I ATGCAT 2 cut(s) 127, 1783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.