Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1 | PF00133 | 151 - 771 | 1.2e-145 | tRNA synthetases class I (I, L, M and V) |
| tRNA-synt_1g | PF09334 | 177 - 240 | 9.3e-07 | tRNA synthetases class I (M) |
| tRNA-synt_1_2 | PF13603 | 393 - 452 | 1.8e-06 | Leucyl-tRNA synthetase, editing domain |
| Anticodon_1 | PF08264 | 817 - 959 | 3.9e-33 | Anticodon-binding domain of tRNA ligase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 5 cut(s) | 88, 548, 637, 779, 1317 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1256, 2652, 3274 |
| AccI | GTMKAC | 1 cut(s) | 1625 |
| AccII | CGCG | 2 cut(s) | 155, 3215 |
| AccIII | TCCGGA | 1 cut(s) | 3108 |
| AclWI | GGATC | 9 cut(s) | 362, 1241, 1286, 1841, 1854, 2108, 2177, 2190, 2751 |
| AcoI | YGGCCR | 6 cut(s) | 385, 562, 1098, 1907, 2891, 2967 |
| AcsI | RAATTY | 9 cut(s) | 74, 737, 1037, 1253, 1331, 1382, 1485, 1829, 2176 |
| AcuI | CTGAAG | 6 cut(s) | 113, 254, 768, 1446, 1932, 1949 |
| AcvI | CACGTG | 1 cut(s) | 1866 |
| AcyI | GRCGYC | 2 cut(s) | 89, 1318 |
| AfaI | GTAC | 5 cut(s) | 1146, 2031, 2370, 2466, 2555 |
| AflII | CTTAAG | 1 cut(s) | 3062 |
| AflIII | ACRYGT | 1 cut(s) | 1863 |
| AjnI | CCWGG | 5 cut(s) | 336, 640, 713, 1368, 3152 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 497, 529, 1107, 1139 |
| AleI | CACNNNNGTG | 1 cut(s) | 2534 |
| Alw21I | GWGCWC | 1 cut(s) | 503 |
| Alw26I | GTCTC | 5 cut(s) | 99, 368, 2156, 2284, 3255 |
| AlwI | GGATC | 9 cut(s) | 362, 1241, 1286, 1841, 1854, 2108, 2177, 2190, 2751 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1424, 2531, 2900 |
| Ama87I | CYCGRG | 2 cut(s) | 1410, 3233 |
| Aor13HI | TCCGGA | 1 cut(s) | 3108 |
| ApaI | GGGCCC | 1 cut(s) | 13 |
| ApoI | RAATTY | 9 cut(s) | 74, 737, 1037, 1253, 1331, 1382, 1485, 1829, 2176 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3171, 3203 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1569 |
| AspLEI | GCGC | 8 cut(s) | 91, 155, 157, 277, 1320, 1479, 2434, 2727 |
| AspS9I | GGNCC | 8 cut(s) | 9, 10, 123, 649, 825, 1285, 1444, 3187 |
| AsuC2I | CCSGG | 4 cut(s) | 188, 1017, 1963, 3191 |
| AsuHPI | GGTGA | 5 cut(s) | 1097, 1139, 1688, 1742, 2727 |
| AvaI | CYCGRG | 2 cut(s) | 1410, 3233 |
| AvaII | GGWCC | 3 cut(s) | 649, 825, 3187 |
| AxyI | CCTNAGG | 2 cut(s) | 17, 2232 |
| BaeGI | GKGCMC | 3 cut(s) | 13, 553, 782 |
| BalI | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| BamHI | GGATCC | 2 cut(s) | 1846, 2182 |
| BanI | GGYRCC | 5 cut(s) | 88, 548, 637, 779, 1317 |
| BanII | GRGCYC | 3 cut(s) | 13, 503, 1518 |
| BbrPI | CACGTG | 1 cut(s) | 1866 |
| BbsI | GAAGAC | 4 cut(s) | 126, 189, 476, 3129 |
| Bbv12I | GWGCWC | 1 cut(s) | 503 |
| BccI | CCATC | 8 cut(s) | 154, 1349, 1367, 1638, 1761, 2163, 2740, 3112 |
| BceAI | ACGGC | 2 cut(s) | 76, 2928 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 782, 816, 2987, 3021, 3270, 3304 |
| BciT130I | CCWGG | 5 cut(s) | 338, 642, 715, 1370, 3154 |
| BciVI | GTATCC | 1 cut(s) | 2448 |
| BcnI | CCSGG | 4 cut(s) | 188, 1017, 1963, 3191 |
| BcoDI | GTCTC | 5 cut(s) | 99, 368, 2156, 2284, 3255 |
| BfaI | CTAG | 4 cut(s) | 926, 1107, 1494, 1809 |
| BfmI | CTRYAG | 5 cut(s) | 910, 1032, 2199, 2532, 2790 |
| BfoI | RGCGCY | 3 cut(s) | 92, 1321, 2728 |
| BfrI | CTTAAG | 1 cut(s) | 3062 |
| BfuI | GTATCC | 1 cut(s) | 2448 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1415 |
| BglII | AGATCT | 1 cut(s) | 1924 |
| BlpI | GCTNAGC | 1 cut(s) | 264 |
| BmcAI | AGTACT | 1 cut(s) | 2466 |
| Bme1390I | CCNGG | 9 cut(s) | 188, 338, 642, 715, 1017, 1370, 1963, 3154, 3191 |
| Bme18I | GGWCC | 3 cut(s) | 649, 825, 3187 |
| BmeT110I | CYCGRG | 2 cut(s) | 1410, 3233 |
| BmgT120I | GGNCC | 8 cut(s) | 9, 10, 123, 649, 825, 1285, 1444, 3187 |
| BmrFI | CCNGG | 9 cut(s) | 188, 338, 642, 715, 1017, 1370, 1963, 3154, 3191 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2670 |
| BpiI | GAAGAC | 4 cut(s) | 126, 189, 476, 3129 |
| BpmI | CTGGAG | 2 cut(s) | 126, 2972 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 264 |
| BpuEI | CTTGAG | 3 cut(s) | 1625, 1670, 2141 |
| BpuMI | CCSGG | 4 cut(s) | 188, 1017, 1963, 3191 |
| BsaAI | YACGTR | 1 cut(s) | 1866 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2421 |
| BsaHI | GRCGYC | 2 cut(s) | 89, 1318 |
| BsaI | GGTCTC | 1 cut(s) | 2156 |
| BsaJI | CCNNGG | 6 cut(s) | 1461, 1480, 2097, 2187, 2612, 3153 |
| BsaWI | WCCGGW | 1 cut(s) | 3108 |
| Bse118I | RCCGGY | 3 cut(s) | 146, 1282, 3170 |
| Bse1I | ACTGG | 7 cut(s) | 550, 827, 1267, 2449, 2505, 2955, 3022 |
| Bse21I | CCTNAGG | 2 cut(s) | 17, 2232 |
| Bse3DI | GCAATG | 1 cut(s) | 1474 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2421 |
| BseAI | TCCGGA | 1 cut(s) | 3108 |
| BseBI | CCWGG | 5 cut(s) | 338, 642, 715, 1370, 3154 |
| BseDI | CCNNGG | 6 cut(s) | 1461, 1480, 2097, 2187, 2612, 3153 |
| BseJI | GATNNNNATC | 1 cut(s) | 2421 |
| BseMI | GCAATG | 1 cut(s) | 1474 |
| BseMII | CTCAG | 2 cut(s) | 2306, 2427 |
| BseNI | ACTGG | 7 cut(s) | 550, 827, 1267, 2449, 2505, 2955, 3022 |
| BsePI | GCGCGC | 1 cut(s) | 153 |
| BseRI | GAGGAG | 3 cut(s) | 129, 356, 359 |
| BseSI | GKGCMC | 3 cut(s) | 13, 553, 782 |
| BsgI | GTGCAG | 1 cut(s) | 2274 |
| Bsh1236I | CGCG | 2 cut(s) | 155, 3215 |
| BshNI | GGYRCC | 5 cut(s) | 88, 548, 637, 779, 1317 |
| BsiHKAI | GWGCWC | 1 cut(s) | 503 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1410, 3233 |
| BsiSI | CCGG | 9 cut(s) | 147, 188, 1016, 1283, 1910, 1962, 3109, 3171, 3191 |
| BslFI | GGGAC | 3 cut(s) | 811, 1273, 3173 |
| BsmAI | GTCTC | 5 cut(s) | 99, 368, 2156, 2284, 3255 |
| BsmBI | CGTCTC | 1 cut(s) | 99 |
| BsmFI | GGGAC | 3 cut(s) | 811, 1273, 3173 |
| BsmI | GAATGC | 2 cut(s) | 1656, 2368 |
| Bso31I | GGTCTC | 1 cut(s) | 2156 |
| BsoBI | CYCGRG | 2 cut(s) | 1410, 3233 |
| Bsp120I | GGGCCC | 1 cut(s) | 9 |
| Bsp1286I | GDGCHC | 5 cut(s) | 13, 503, 553, 782, 1518 |
| Bsp13I | TCCGGA | 1 cut(s) | 3108 |
| Bsp1407I | TGTACA | 1 cut(s) | 1144 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 264 |
| BspCNI | CTCAG | 2 cut(s) | 2305, 2426 |
| BspEI | TCCGGA | 1 cut(s) | 3108 |
| BspFNI | CGCG | 2 cut(s) | 155, 3215 |
| BspHI | TCATGA | 1 cut(s) | 2766 |
| BspMAI | CTGCAG | 1 cut(s) | 2536 |
| BspPI | GGATC | 9 cut(s) | 362, 1241, 1286, 1841, 1854, 2108, 2177, 2190, 2751 |
| BspT107I | GGYRCC | 5 cut(s) | 88, 548, 637, 779, 1317 |
| BspTI | CTTAAG | 1 cut(s) | 3062 |
| BspTNI | GGTCTC | 1 cut(s) | 2156 |
| BsrDI | GCAATG | 1 cut(s) | 1474 |
| BsrFI | RCCGGY | 3 cut(s) | 146, 1282, 3170 |
| BsrGI | TGTACA | 1 cut(s) | 1144 |
| BsrI | ACTGG | 7 cut(s) | 550, 827, 1267, 2449, 2505, 2955, 3022 |
| BssAI | RCCGGY | 3 cut(s) | 146, 1282, 3170 |
| BssECI | CCNNGG | 6 cut(s) | 1461, 1480, 2097, 2187, 2612, 3153 |
| BssHII | GCGCGC | 1 cut(s) | 153 |
| BssNAI | GTATAC | 1 cut(s) | 1626 |
| BssNI | GRCGYC | 2 cut(s) | 89, 1318 |
| BssT1I | CCWWGG | 5 cut(s) | 1461, 1480, 2097, 2187, 2612 |
| Bst1107I | GTATAC | 1 cut(s) | 1626 |
| Bst2UI | CCWGG | 5 cut(s) | 338, 642, 715, 1370, 3154 |
| Bst4CI | ACNGT | 7 cut(s) | 1623, 1700, 2200, 2358, 2718, 2791, 2989 |
| Bst6I | CTCTTC | 5 cut(s) | 102, 348, 1634, 1785, 2862 |
| BstACI | GRCGYC | 2 cut(s) | 89, 1318 |
| BstAFI | CTTAAG | 1 cut(s) | 3062 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2531, 2540 |
| BstAUI | TGTACA | 1 cut(s) | 1144 |
| BstBAI | YACGTR | 1 cut(s) | 1866 |
| BstC8I | GCNNGC | 9 cut(s) | 155, 658, 1907, 2387, 2757, 2895, 2967, 3265, 3269 |
| BstDEI | CTNAG | 5 cut(s) | 17, 264, 2232, 2292, 2413 |
| BstEII | GGTNACC | 1 cut(s) | 1694 |
| BstFNI | CGCG | 2 cut(s) | 155, 3215 |
| BstH2I | RGCGCY | 3 cut(s) | 92, 1321, 2728 |
| BstHHI | GCGC | 8 cut(s) | 91, 155, 157, 277, 1320, 1479, 2434, 2727 |
| BstMAI | GTCTC | 5 cut(s) | 99, 368, 2156, 2284, 3255 |
| BstNI | CCWGG | 5 cut(s) | 338, 642, 715, 1370, 3154 |
| BstNSI | RCATGY | 2 cut(s) | 323, 1190 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2670 |
| BstPI | GGTNACC | 1 cut(s) | 1694 |
| BstSCI | CCNGG | 9 cut(s) | 186, 336, 640, 713, 1015, 1368, 1961, 3152, 3189 |
| BstSFI | CTRYAG | 5 cut(s) | 910, 1032, 2199, 2532, 2790 |
| BstSLI | GKGCMC | 3 cut(s) | 13, 553, 782 |
| BstUI | CGCG | 2 cut(s) | 155, 3215 |
| BstV2I | GAAGAC | 4 cut(s) | 126, 189, 476, 3129 |
| BstX2I | RGATCY | 3 cut(s) | 1846, 1924, 2182 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1376, 2098 |
| BstYI | RGATCY | 3 cut(s) | 1846, 1924, 2182 |
| BstZ17I | GTATAC | 1 cut(s) | 1626 |
| Bsu36I | CCTNAGG | 2 cut(s) | 17, 2232 |
| BsuI | GTATCC | 1 cut(s) | 2448 |
| BtgZI | GCGATG | 3 cut(s) | 1780, 2580, 3173 |
| BtsI | GCAGTG | 4 cut(s) | 1425, 2286, 2529, 2541 |
| BtsIMutI | CAGTG | 7 cut(s) | 1425, 2286, 2456, 2498, 2529, 2541, 2787 |
| Cac8I | GCNNGC | 9 cut(s) | 155, 658, 1907, 2387, 2757, 2895, 2967, 3265, 3269 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1424, 2531, 2900 |
| CciI | TCATGA | 1 cut(s) | 2766 |
| CfoI | GCGC | 8 cut(s) | 91, 155, 157, 277, 1320, 1479, 2434, 2727 |
| Cfr10I | RCCGGY | 3 cut(s) | 146, 1282, 3170 |
| Cfr13I | GGNCC | 8 cut(s) | 9, 10, 123, 649, 825, 1285, 1444, 3187 |
| CseI | GACGC | 2 cut(s) | 273, 1009 |
| Csp6I | GTAC | 5 cut(s) | 1145, 2030, 2369, 2465, 2554 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 654, 689, 1670, 1705 |
| CviQI | GTAC | 5 cut(s) | 1145, 2030, 2369, 2465, 2554 |
| DdeI | CTNAG | 5 cut(s) | 17, 264, 2232, 2292, 2413 |
| DinI | GGCGCC | 2 cut(s) | 90, 1319 |
| DraI | TTTAAA | 1 cut(s) | 1453 |
| EaeI | YGGCCR | 6 cut(s) | 385, 562, 1098, 1907, 2891, 2967 |
| Eam1104I | CTCTTC | 5 cut(s) | 102, 348, 1634, 1785, 2862 |
| EarI | CTCTTC | 5 cut(s) | 102, 348, 1634, 1785, 2862 |
| EciI | GGCGGA | 3 cut(s) | 92, 622, 2831 |
| Ecl136II | GAGCTC | 1 cut(s) | 501 |
| Eco130I | CCWWGG | 5 cut(s) | 1461, 1480, 2097, 2187, 2612 |
| Eco24I | GRGCYC | 3 cut(s) | 13, 503, 1518 |
| Eco31I | GGTCTC | 1 cut(s) | 2156 |
| Eco32I | GATATC | 1 cut(s) | 3288 |
| Eco47I | GGWCC | 3 cut(s) | 649, 825, 3187 |
| Eco53kI | GAGCTC | 1 cut(s) | 501 |
| Eco57I | CTGAAG | 6 cut(s) | 113, 254, 768, 1446, 1932, 1949 |
| Eco72I | CACGTG | 1 cut(s) | 1866 |
| Eco81I | CCTNAGG | 2 cut(s) | 17, 2232 |
| Eco88I | CYCGRG | 2 cut(s) | 1410, 3233 |
| Eco91I | GGTNACC | 1 cut(s) | 1694 |
| EcoICRI | GAGCTC | 1 cut(s) | 501 |
| EcoO109I | RGGNCCY | 3 cut(s) | 123, 1444, 3187 |
| EcoO65I | GGTNACC | 1 cut(s) | 1694 |
| EcoRII | CCWGG | 5 cut(s) | 336, 640, 713, 1368, 3152 |
| EcoRV | GATATC | 1 cut(s) | 3288 |
| EcoT14I | CCWWGG | 5 cut(s) | 1461, 1480, 2097, 2187, 2612 |
| EcoT38I | GRGCYC | 3 cut(s) | 13, 503, 1518 |
| EgeI | GGCGCC | 2 cut(s) | 90, 1319 |
| EheI | GGCGCC | 2 cut(s) | 90, 1319 |
| ErhI | CCWWGG | 5 cut(s) | 1461, 1480, 2097, 2187, 2612 |
| Esp3I | CGTCTC | 1 cut(s) | 99 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1433, 1465, 1554, 1586, 2579, 2611, 3081, 3113 |
| FaqI | GGGAC | 3 cut(s) | 811, 1273, 3173 |
| FauNDI | CATATG | 1 cut(s) | 3273 |
| FblI | GTMKAC | 1 cut(s) | 1625 |
| FriOI | GRGCYC | 3 cut(s) | 13, 503, 1518 |
| FspBI | CTAG | 4 cut(s) | 926, 1107, 1494, 1809 |
| GlaI | GCGC | 8 cut(s) | 90, 154, 156, 276, 1319, 1478, 2433, 2726 |
| GsuI | CTGGAG | 2 cut(s) | 126, 2972 |
| HaeII | RGCGCY | 3 cut(s) | 92, 1321, 2728 |
| HapII | CCGG | 9 cut(s) | 147, 188, 1016, 1283, 1910, 1962, 3109, 3171, 3191 |
| HgaI | GACGC | 2 cut(s) | 273, 1009 |
| HhaI | GCGC | 8 cut(s) | 91, 155, 157, 277, 1320, 1479, 2434, 2727 |
| Hin1I | GRCGYC | 2 cut(s) | 89, 1318 |
| Hin6I | GCGC | 8 cut(s) | 89, 153, 155, 275, 1318, 1477, 2432, 2725 |
| HinP1I | GCGC | 8 cut(s) | 89, 153, 155, 275, 1318, 1477, 2432, 2725 |
| HincII | GTYRAC | 1 cut(s) | 2948 |
| HindII | GTYRAC | 1 cut(s) | 2948 |
| HindIII | AAGCTT | 5 cut(s) | 246, 266, 1601, 3065, 3221 |
| HpaII | CCGG | 9 cut(s) | 147, 188, 1016, 1283, 1910, 1962, 3109, 3171, 3191 |
| HphI | GGTGA | 5 cut(s) | 1097, 1139, 1688, 1742, 2727 |
| Hpy166II | GTNNAC | 4 cut(s) | 976, 1626, 2864, 2948 |
| Hpy8I | GTNNAC | 4 cut(s) | 976, 1626, 2864, 2948 |
| Hpy99I | CGWCG | 3 cut(s) | 289, 804, 2030 |
| HpyCH4III | ACNGT | 7 cut(s) | 1623, 1700, 2200, 2358, 2718, 2791, 2989 |
| HpyCH4IV | ACGT | 6 cut(s) | 114, 799, 1399, 1865, 2028, 3165 |
| HpyF3I | CTNAG | 5 cut(s) | 17, 264, 2232, 2292, 2413 |
| HpySE526I | ACGT | 6 cut(s) | 114, 799, 1399, 1865, 2028, 3165 |
| Hsp92I | GRCGYC | 2 cut(s) | 89, 1318 |
| HspAI | GCGC | 8 cut(s) | 89, 153, 155, 275, 1318, 1477, 2432, 2725 |
| KasI | GGCGCC | 2 cut(s) | 88, 1317 |
| Kpn2I | TCCGGA | 1 cut(s) | 3108 |
| LmnI | GCTCC | 4 cut(s) | 506, 1513, 1751, 3016 |
| MaeI | CTAG | 4 cut(s) | 926, 1107, 1494, 1809 |
| MaeII | ACGT | 6 cut(s) | 114, 799, 1399, 1865, 2028, 3165 |
| MaeIII | GTNAC | 9 cut(s) | 164, 541, 620, 868, 1420, 1694, 2496, 2704, 3173 |
| MfeI | CAATTG | 1 cut(s) | 2558 |
| MflI | RGATCY | 3 cut(s) | 1846, 1924, 2182 |
| MhlI | GDGCHC | 5 cut(s) | 13, 503, 553, 782, 1518 |
| MlsI | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| MluNI | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| Mly113I | GGCGCC | 2 cut(s) | 89, 1318 |
| MlyI | GAGTC | 3 cut(s) | 370, 2630, 2828 |
| MmeI | TCCRAC | 3 cut(s) | 357, 1291, 3038 |
| Mox20I | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| MroI | TCCGGA | 1 cut(s) | 3108 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1569 |
| MscI | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| MseI | TTAA | 7 cut(s) | 710, 1203, 1452, 1542, 1838, 3063, 3129 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1152, 1176, 2534 |
| Msp20I | TGGCCA | 4 cut(s) | 387, 564, 1100, 2969 |
| MspA1I | CMGCKG | 2 cut(s) | 86, 1551 |
| MspCI | CTTAAG | 1 cut(s) | 3062 |
| MspI | CCGG | 9 cut(s) | 147, 188, 1016, 1283, 1910, 1962, 3109, 3171, 3191 |
| MspR9I | CCNGG | 9 cut(s) | 188, 338, 642, 715, 1017, 1370, 1963, 3154, 3191 |
| MunI | CAATTG | 1 cut(s) | 2558 |
| Mva1269I | GAATGC | 2 cut(s) | 1656, 2368 |
| MvaI | CCWGG | 5 cut(s) | 338, 642, 715, 1370, 3154 |
| MvnI | CGCG | 2 cut(s) | 155, 3215 |
| NarI | GGCGCC | 2 cut(s) | 89, 1318 |
| NciI | CCSGG | 4 cut(s) | 188, 1017, 1963, 3191 |
| NdeI | CATATG | 1 cut(s) | 3273 |
| NmuCI | GTSAC | 6 cut(s) | 541, 868, 1420, 1694, 2496, 2704 |
| NspI | RCATGY | 2 cut(s) | 323, 1190 |
| OliI | CACNNNNGTG | 1 cut(s) | 2534 |
| PaeR7I | CTCGAG | 1 cut(s) | 3233 |
| PagI | TCATGA | 1 cut(s) | 2766 |
| PauI | GCGCGC | 1 cut(s) | 153 |
| PctI | GAATGC | 2 cut(s) | 1656, 2368 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1569 |
| PfeI | GAWTC | 8 cut(s) | 4, 406, 1216, 2062, 2830, 2840, 3199, 3227 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1256, 2652, 3274 |
| PfoI | TCCNGGA | 2 cut(s) | 1015, 3189 |
| PleI | GAGTC | 3 cut(s) | 370, 2629, 2827 |
| PluTI | GGCGCC | 2 cut(s) | 92, 1321 |
| PmaCI | CACGTG | 1 cut(s) | 1866 |
| PmlI | CACGTG | 1 cut(s) | 1866 |
| PpsI | GAGTC | 3 cut(s) | 370, 2629, 2827 |
| Ppu21I | YACGTR | 1 cut(s) | 1866 |
| PpuMI | RGGWCCY | 1 cut(s) | 3187 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2670 |
| Psp124BI | GAGCTC | 1 cut(s) | 503 |
| Psp5II | RGGWCCY | 1 cut(s) | 3187 |
| Psp6I | CCWGG | 5 cut(s) | 336, 640, 713, 1368, 3152 |
| PspCI | CACGTG | 1 cut(s) | 1866 |
| PspEI | GGTNACC | 1 cut(s) | 1694 |
| PspGI | CCWGG | 5 cut(s) | 336, 640, 713, 1368, 3152 |
| PspOMI | GGGCCC | 1 cut(s) | 9 |
| PspPI | GGNCC | 8 cut(s) | 9, 10, 123, 649, 825, 1285, 1444, 3187 |
| PspPPI | RGGWCCY | 1 cut(s) | 3187 |
| PstI | CTGCAG | 1 cut(s) | 2536 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1424, 2531, 2900 |
| PsuI | RGATCY | 3 cut(s) | 1846, 1924, 2182 |
| PteI | GCGCGC | 1 cut(s) | 153 |
| RsaI | GTAC | 5 cut(s) | 1146, 2031, 2370, 2466, 2555 |
| RsaNI | GTAC | 5 cut(s) | 1145, 2030, 2369, 2465, 2554 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1152, 1176, 2534 |
| SacI | GAGCTC | 1 cut(s) | 503 |
| SaqAI | TTAA | 7 cut(s) | 710, 1203, 1452, 1542, 1838, 3063, 3129 |
| Sau96I | GGNCC | 8 cut(s) | 9, 10, 123, 649, 825, 1285, 1444, 3187 |
| ScaI | AGTACT | 1 cut(s) | 2466 |
| SchI | GAGTC | 3 cut(s) | 370, 2630, 2828 |
| ScrFI | CCNGG | 9 cut(s) | 188, 338, 642, 715, 1017, 1370, 1963, 3154, 3191 |
| SduI | GDGCHC | 5 cut(s) | 13, 503, 553, 782, 1518 |
| SfcI | CTRYAG | 5 cut(s) | 910, 1032, 2199, 2532, 2790 |
| SfoI | GGCGCC | 2 cut(s) | 90, 1319 |
| Sfr274I | CTCGAG | 1 cut(s) | 3233 |
| SinI | GGWCC | 3 cut(s) | 649, 825, 3187 |
| SlaI | CTCGAG | 1 cut(s) | 3233 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1152, 1176, 2534 |
| SmlI | CTYRAG | 5 cut(s) | 1604, 1649, 2120, 3062, 3233 |
| SmoI | CTYRAG | 5 cut(s) | 1604, 1649, 2120, 3062, 3233 |
| SspDI | GGCGCC | 2 cut(s) | 88, 1317 |
| SspMI | CTAG | 4 cut(s) | 926, 1107, 1494, 1809 |
| SstI | GAGCTC | 1 cut(s) | 503 |
| StyD4I | CCNGG | 9 cut(s) | 186, 336, 640, 713, 1015, 1368, 1961, 3152, 3189 |
| StyI | CCWWGG | 5 cut(s) | 1461, 1480, 2097, 2187, 2612 |
| TaaI | ACNGT | 7 cut(s) | 1623, 1700, 2200, 2358, 2718, 2791, 2989 |
| TaiI | ACGT | 6 cut(s) | 117, 802, 1402, 1868, 2031, 3168 |
| TaqI | TCGA | 6 cut(s) | 287, 404, 1993, 2619, 2911, 3234 |
| TatI | WGTACW | 2 cut(s) | 1144, 2464 |
| TauI | GCSGC | 3 cut(s) | 89, 108, 2893 |
| TfiI | GAWTC | 8 cut(s) | 4, 406, 1216, 2062, 2830, 2840, 3199, 3227 |
| Tru1I | TTAA | 7 cut(s) | 710, 1203, 1452, 1542, 1838, 3063, 3129 |
| Tru9I | TTAA | 7 cut(s) | 710, 1203, 1452, 1542, 1838, 3063, 3129 |
| TscAI | CASTG | 7 cut(s) | 1425, 2293, 2456, 2505, 2536, 2541, 2794 |
| TseFI | GTSAC | 6 cut(s) | 541, 868, 1420, 1694, 2496, 2704 |
| Tsp45I | GTSAC | 6 cut(s) | 541, 868, 1420, 1694, 2496, 2704 |
| TspGWI | ACGGA | 3 cut(s) | 183, 412, 2255 |
| TspRI | CASTG | 7 cut(s) | 1425, 2293, 2456, 2505, 2536, 2541, 2794 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1256, 2652, 3274 |
| Vha464I | CTTAAG | 1 cut(s) | 3062 |
| VpaK11BI | GGWCC | 3 cut(s) | 649, 825, 3187 |
| XapI | RAATTY | 9 cut(s) | 74, 737, 1037, 1253, 1331, 1382, 1485, 1829, 2176 |
| XbaI | TCTAGA | 1 cut(s) | 1493 |
| XceI | RCATGY | 2 cut(s) | 323, 1190 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1108 |
| XhoI | CTCGAG | 1 cut(s) | 3233 |
| XmiI | GTMKAC | 1 cut(s) | 1625 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1569 |
| XspI | CTAG | 4 cut(s) | 926, 1107, 1494, 1809 |
| ZrmI | AGTACT | 1 cut(s) | 2466 |