Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1 | PF00133 | 97 - 731 | 1e-137 | tRNA synthetases class I (I, L, M and V) |
| tRNA-synt_1g | PF09334 | 124 - 177 | 3.5e-06 | tRNA synthetases class I (M) |
| tRNA-synt_1_2 | PF13603 | 337 - 397 | 5.8e-08 | Leucyl-tRNA synthetase, editing domain |
| Anticodon_1 | PF08264 | 777 - 910 | 4.4e-29 | Anticodon-binding domain of tRNA ligase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 729, 1239, 2484 |
| AccB1I | GGYRCC | 1 cut(s) | 614 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1088, 2838 |
| AccI | GTMKAC | 2 cut(s) | 1466, 1694 |
| AccII | CGCG | 1 cut(s) | 1246 |
| AccIII | TCCGGA | 1 cut(s) | 982 |
| AciI | CCGC | 5 cut(s) | 87, 365, 442, 445, 2752 |
| AclWI | GGATC | 4 cut(s) | 1073, 1118, 1985, 2483 |
| AcoI | YGGCCR | 3 cut(s) | 1763, 2753, 2840 |
| AcsI | RAATTY | 4 cut(s) | 1085, 1217, 1658, 2905 |
| AcuI | CTGAAG | 3 cut(s) | 83, 863, 1281 |
| AfaI | GTAC | 4 cut(s) | 924, 1891, 2346, 2435 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 720, 1037, 1088, 2088, 2838 |
| AgsI | TTSAA | 7 cut(s) | 245, 827, 1814, 2024, 2046, 2459, 2895 |
| AjnI | CCWGG | 4 cut(s) | 475, 548, 850, 2755 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 939, 971 |
| AleI | CACNNNNGTG | 1 cut(s) | 383 |
| Alw21I | GWGCWC | 1 cut(s) | 57 |
| Alw26I | GTCTC | 4 cut(s) | 243, 644, 1242, 2782 |
| AlwI | GGATC | 4 cut(s) | 1073, 1118, 1985, 2483 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1649 |
| Ama87I | CYCGRG | 1 cut(s) | 1516 |
| Aor13HI | TCCGGA | 1 cut(s) | 982 |
| AoxI | GGCC | 6 cut(s) | 397, 877, 1763, 2539, 2753, 2840 |
| ApeKI | GCWGC | 7 cut(s) | 413, 625, 628, 1649, 1906, 2405, 2609 |
| ApoI | RAATTY | 4 cut(s) | 1085, 1217, 1658, 2905 |
| AseI | ATTAAT | 1 cut(s) | 2301 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2102 |
| AspLEI | GCGC | 4 cut(s) | 1120, 1152, 1246, 1396 |
| AspS9I | GGNCC | 4 cut(s) | 4, 202, 484, 1702 |
| AsuC2I | CCSGG | 2 cut(s) | 541, 1115 |
| AsuHPI | GGTGA | 7 cut(s) | 191, 971, 1267, 1529, 1892, 2788, 2860 |
| AsuII | TTCGAA | 1 cut(s) | 1137 |
| AvaI | CYCGRG | 1 cut(s) | 1516 |
| AvaII | GGWCC | 4 cut(s) | 4, 202, 484, 1702 |
| AxyI | CCTNAGG | 2 cut(s) | 1581, 2543 |
| BalI | TGGCCA | 1 cut(s) | 1765 |
| BanI | GGYRCC | 1 cut(s) | 614 |
| BanII | GRGCYC | 2 cut(s) | 57, 1353 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 906, 938 |
| BbsI | GAAGAC | 1 cut(s) | 1785 |
| Bbv12I | GWGCWC | 1 cut(s) | 57 |
| BbvI | GCAGC | 7 cut(s) | 400, 637, 640, 1636, 1893, 2417, 2621 |
| BceAI | ACGGC | 4 cut(s) | 621, 2609, 2765, 2827 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2205, 2239, 2601, 2635 |
| BciT130I | CCWGG | 4 cut(s) | 477, 550, 852, 2757 |
| BciVI | GTATCC | 2 cut(s) | 372, 2328 |
| BclI | TGATCA | 1 cut(s) | 1471 |
| BcnI | CCSGG | 2 cut(s) | 541, 1115 |
| BcoDI | GTCTC | 4 cut(s) | 243, 644, 1242, 2782 |
| BfaI | CTAG | 5 cut(s) | 395, 1329, 1445, 1638, 2729 |
| BfmI | CTRYAG | 2 cut(s) | 117, 745 |
| BfoI | RGCGCY | 1 cut(s) | 1153 |
| BfuI | GTATCC | 2 cut(s) | 372, 2328 |
| BmcAI | AGTACT | 1 cut(s) | 2346 |
| Bme1390I | CCNGG | 6 cut(s) | 477, 541, 550, 852, 1115, 2757 |
| Bme18I | GGWCC | 4 cut(s) | 4, 202, 484, 1702 |
| BmeT110I | CYCGRG | 1 cut(s) | 1516 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 202, 484, 1702 |
| BmiI | GGNNCC | 6 cut(s) | 6, 204, 616, 849, 1350, 1704 |
| BmrFI | CCNGG | 6 cut(s) | 477, 541, 550, 852, 1115, 2757 |
| BmrI | ACTGGG | 2 cut(s) | 778, 1827 |
| BmsI | GCATC | 9 cut(s) | 316, 988, 1012, 1054, 1218, 1521, 1936, 2125, 2392 |
| BmuI | ACTGGG | 2 cut(s) | 778, 1827 |
| BpiI | GAAGAC | 1 cut(s) | 1785 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 677, 709, 797, 829 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2409 |
| Bpu14I | TTCGAA | 1 cut(s) | 1137 |
| BpuEI | CTTGAG | 3 cut(s) | 1181, 1253, 1511 |
| BpuMI | CCSGG | 2 cut(s) | 541, 1115 |
| Bsa29I | ATCGAT | 1 cut(s) | 2621 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1313 |
| BsaJI | CCNNGG | 5 cut(s) | 8, 124, 198, 1113, 2646 |
| BsaWI | WCCGGW | 1 cut(s) | 982 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 720, 1037, 1088, 2088, 2838 |
| Bse21I | CCTNAGG | 2 cut(s) | 1581, 2543 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1313 |
| BseAI | TCCGGA | 1 cut(s) | 982 |
| BseBI | CCWGG | 4 cut(s) | 477, 550, 852, 2757 |
| BseCI | ATCGAT | 1 cut(s) | 2621 |
| BseDI | CCNNGG | 5 cut(s) | 8, 124, 198, 1113, 2646 |
| BseJI | GATNNNNATC | 1 cut(s) | 1313 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 720, 1037, 1088, 2088, 2838 |
| BseMII | CTCAG | 8 cut(s) | 518, 1287, 1379, 1572, 1712, 2355, 2534, 2786 |
| BseRI | GAGGAG | 2 cut(s) | 1433, 2324 |
| BseXI | GCAGC | 7 cut(s) | 400, 637, 640, 1636, 1893, 2417, 2621 |
| BseYI | CCCAGC | 1 cut(s) | 491 |
| BsgI | GTGCAG | 3 cut(s) | 1913, 2151, 2151 |
| Bsh1236I | CGCG | 1 cut(s) | 1246 |
| BshFI | GGCC | 6 cut(s) | 399, 879, 1765, 2541, 2755, 2842 |
| BshNI | GGYRCC | 1 cut(s) | 614 |
| BshVI | ATCGAT | 1 cut(s) | 2621 |
| BsiHKAI | GWGCWC | 1 cut(s) | 57 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1516 |
| BsiSI | CCGG | 3 cut(s) | 540, 983, 1115 |
| BslFI | GGGAC | 2 cut(s) | 437, 2285 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 720, 1037, 1088, 2088, 2838 |
| BsmAI | GTCTC | 4 cut(s) | 243, 644, 1242, 2782 |
| BsmBI | CGTCTC | 1 cut(s) | 644 |
| BsmFI | GGGAC | 2 cut(s) | 437, 2285 |
| BsmI | GAATGC | 3 cut(s) | 1790, 2245, 2719 |
| BsnI | GGCC | 6 cut(s) | 399, 879, 1765, 2541, 2755, 2842 |
| BsoBI | CYCGRG | 1 cut(s) | 1516 |
| Bsp119I | TTCGAA | 1 cut(s) | 1137 |
| Bsp1286I | GDGCHC | 2 cut(s) | 57, 1353 |
| Bsp13I | TCCGGA | 1 cut(s) | 982 |
| Bsp143I | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| Bsp19I | CCATGG | 2 cut(s) | 8, 2646 |
| BspACI | CCGC | 5 cut(s) | 87, 365, 442, 445, 2752 |
| BspANI | GGCC | 6 cut(s) | 399, 879, 1765, 2541, 2755, 2842 |
| BspCNI | CTCAG | 8 cut(s) | 517, 1288, 1378, 1573, 1711, 2354, 2535, 2785 |
| BspDI | ATCGAT | 1 cut(s) | 2621 |
| BspEI | TCCGGA | 1 cut(s) | 982 |
| BspFNI | CGCG | 1 cut(s) | 1246 |
| BspLI | GGNNCC | 6 cut(s) | 6, 204, 616, 849, 1350, 1704 |
| BspPI | GGATC | 4 cut(s) | 1073, 1118, 1985, 2483 |
| BspQI | GCTCTTC | 1 cut(s) | 2145 |
| BspT104I | TTCGAA | 1 cut(s) | 1137 |
| BspT107I | GGYRCC | 1 cut(s) | 614 |
| BssECI | CCNNGG | 5 cut(s) | 8, 124, 198, 1113, 2646 |
| BssMI | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| BssNAI | GTATAC | 1 cut(s) | 1467 |
| BssT1I | CCWWGG | 3 cut(s) | 8, 198, 2646 |
| Bst1107I | GTATAC | 1 cut(s) | 1467 |
| Bst2UI | CCWGG | 4 cut(s) | 477, 550, 852, 2757 |
| Bst4CI | ACNGT | 8 cut(s) | 125, 234, 611, 1541, 1596, 2172, 2276, 2371 |
| Bst6I | CTCTTC | 8 cut(s) | 17, 246, 1475, 1626, 1745, 2145, 2574, 2778 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1556, 1649, 2504 |
| BstBI | TTCGAA | 1 cut(s) | 1137 |
| BstC8I | GCNNGC | 4 cut(s) | 440, 1148, 1763, 1849 |
| BstDEI | CTNAG | 9 cut(s) | 504, 1296, 1365, 1581, 1698, 2341, 2409, 2543, 2772 |
| BstDSI | CCRYGG | 3 cut(s) | 8, 124, 2646 |
| BstEII | GGTNACC | 1 cut(s) | 1535 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 718 |
| BstFNI | CGCG | 1 cut(s) | 1246 |
| BstH2I | RGCGCY | 1 cut(s) | 1153 |
| BstHHI | GCGC | 4 cut(s) | 1120, 1152, 1246, 1396 |
| BstKTI | GATC | 7 cut(s) | 559, 1081, 1126, 1452, 1474, 1993, 2491 |
| BstMAI | GTCTC | 4 cut(s) | 243, 644, 1242, 2782 |
| BstMBI | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 83, 160, 410, 497, 1400, 1556, 1649, 2411, 2504 |
| BstNI | CCWGG | 4 cut(s) | 477, 550, 852, 2757 |
| BstNSI | RCATGY | 1 cut(s) | 1022 |
| BstPI | GGTNACC | 1 cut(s) | 1535 |
| BstSCI | CCNGG | 6 cut(s) | 475, 539, 548, 850, 1113, 2755 |
| BstSFI | CTRYAG | 2 cut(s) | 117, 745 |
| BstUI | CGCG | 1 cut(s) | 1246 |
| BstV1I | GCAGC | 7 cut(s) | 400, 637, 640, 1636, 1893, 2417, 2621 |
| BstV2I | GAAGAC | 1 cut(s) | 1785 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1208, 2883 |
| BstZ17I | GTATAC | 1 cut(s) | 1467 |
| Bsu15I | ATCGAT | 1 cut(s) | 2621 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1581, 2543 |
| BsuI | GTATCC | 2 cut(s) | 372, 2328 |
| BsuRI | GGCC | 6 cut(s) | 399, 879, 1765, 2541, 2755, 2842 |
| BsuTUI | ATCGAT | 1 cut(s) | 2621 |
| BtgI | CCRYGG | 3 cut(s) | 8, 124, 2646 |
| BtsI | GCAGTG | 3 cut(s) | 408, 1650, 2163 |
| BtsIMutI | CAGTG | 9 cut(s) | 408, 1042, 1179, 1373, 1474, 1650, 2163, 2218, 2336 |
| Cac8I | GCNNGC | 4 cut(s) | 440, 1148, 1763, 1849 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1649 |
| CfoI | GCGC | 4 cut(s) | 1120, 1152, 1246, 1396 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 202, 484, 1702 |
| ClaI | ATCGAT | 1 cut(s) | 2621 |
| Csp6I | GTAC | 4 cut(s) | 923, 1890, 2345, 2434 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 255, 290, 684, 719, 1511, 1546, 2107, 2142 |
| CviQI | GTAC | 4 cut(s) | 923, 1890, 2345, 2434 |
| DdeI | CTNAG | 9 cut(s) | 504, 1296, 1365, 1581, 1698, 2341, 2409, 2543, 2772 |
| DpnI | GATC | 7 cut(s) | 558, 1080, 1125, 1451, 1473, 1992, 2490 |
| DpnII | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| EaeI | YGGCCR | 3 cut(s) | 1763, 2753, 2840 |
| Eam1104I | CTCTTC | 8 cut(s) | 17, 246, 1475, 1626, 1745, 2145, 2574, 2778 |
| EarI | CTCTTC | 8 cut(s) | 17, 246, 1475, 1626, 1745, 2145, 2574, 2778 |
| EciI | GGCGGA | 2 cut(s) | 354, 460 |
| Ecl136II | GAGCTC | 1 cut(s) | 55 |
| Eco130I | CCWWGG | 3 cut(s) | 8, 198, 2646 |
| Eco24I | GRGCYC | 2 cut(s) | 57, 1353 |
| Eco32I | GATATC | 2 cut(s) | 2213, 2799 |
| Eco47I | GGWCC | 4 cut(s) | 4, 202, 484, 1702 |
| Eco53kI | GAGCTC | 1 cut(s) | 55 |
| Eco57I | CTGAAG | 3 cut(s) | 83, 863, 1281 |
| Eco81I | CCTNAGG | 2 cut(s) | 1581, 2543 |
| Eco88I | CYCGRG | 1 cut(s) | 1516 |
| Eco91I | GGTNACC | 1 cut(s) | 1535 |
| EcoICRI | GAGCTC | 1 cut(s) | 55 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 718 |
| EcoO109I | RGGNCCY | 2 cut(s) | 202, 1702 |
| EcoO65I | GGTNACC | 1 cut(s) | 1535 |
| EcoRII | CCWGG | 4 cut(s) | 475, 548, 850, 2755 |
| EcoRV | GATATC | 2 cut(s) | 2213, 2799 |
| EcoT14I | CCWWGG | 3 cut(s) | 8, 198, 2646 |
| EcoT38I | GRGCYC | 2 cut(s) | 57, 1353 |
| ErhI | CCWWGG | 3 cut(s) | 8, 198, 2646 |
| Esp3I | CGTCTC | 1 cut(s) | 644 |
| FaqI | GGGAC | 2 cut(s) | 437, 2285 |
| FauNDI | CATATG | 1 cut(s) | 217 |
| FbaI | TGATCA | 1 cut(s) | 1471 |
| FblI | GTMKAC | 2 cut(s) | 1466, 1694 |
| FriOI | GRGCYC | 2 cut(s) | 57, 1353 |
| FspBI | CTAG | 5 cut(s) | 395, 1329, 1445, 1638, 2729 |
| GlaI | GCGC | 4 cut(s) | 1119, 1151, 1245, 1395 |
| GsaI | CCCAGC | 1 cut(s) | 495 |
| HaeII | RGCGCY | 1 cut(s) | 1153 |
| HaeIII | GGCC | 6 cut(s) | 399, 879, 1765, 2541, 2755, 2842 |
| HapII | CCGG | 3 cut(s) | 540, 983, 1115 |
| HhaI | GCGC | 4 cut(s) | 1120, 1152, 1246, 1396 |
| Hin6I | GCGC | 4 cut(s) | 1118, 1150, 1244, 1394 |
| HinP1I | GCGC | 4 cut(s) | 1118, 1150, 1244, 1394 |
| HincII | GTYRAC | 2 cut(s) | 766, 2747 |
| HindII | GTYRAC | 2 cut(s) | 766, 2747 |
| HindIII | AAGCTT | 4 cut(s) | 95, 152, 1070, 2039 |
| HinfI | GANTC | 6 cut(s) | 211, 812, 1047, 1691, 1939, 2384 |
| HpaII | CCGG | 3 cut(s) | 540, 983, 1115 |
| HphI | GGTGA | 7 cut(s) | 191, 971, 1267, 1529, 1892, 2788, 2860 |
| Hpy166II | GTNNAC | 7 cut(s) | 766, 811, 1467, 1695, 2030, 2726, 2747 |
| Hpy188I | TCNGA | 4 cut(s) | 535, 799, 2176, 2401 |
| Hpy8I | GTNNAC | 7 cut(s) | 766, 811, 1467, 1695, 2030, 2726, 2747 |
| HpyCH4III | ACNGT | 8 cut(s) | 125, 234, 611, 1541, 1596, 2172, 2276, 2371 |
| HpyCH4IV | ACGT | 2 cut(s) | 836, 1234 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 83, 160, 410, 497, 1400, 1556, 1649, 2411, 2504 |
| HpyF3I | CTNAG | 9 cut(s) | 504, 1296, 1365, 1581, 1698, 2341, 2409, 2543, 2772 |
| HpySE526I | ACGT | 2 cut(s) | 836, 1234 |
| HspAI | GCGC | 4 cut(s) | 1118, 1150, 1244, 1394 |
| Kpn2I | TCCGGA | 1 cut(s) | 982 |
| Ksp22I | TGATCA | 1 cut(s) | 1471 |
| Kzo9I | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| LguI | GCTCTTC | 1 cut(s) | 2145 |
| LmnI | GCTCC | 5 cut(s) | 341, 782, 1348, 2311, 2878 |
| Lsp1109I | GCAGC | 7 cut(s) | 400, 637, 640, 1636, 1893, 2417, 2621 |
| LweI | GCATC | 9 cut(s) | 316, 988, 1012, 1054, 1218, 1521, 1936, 2125, 2392 |
| MaeI | CTAG | 5 cut(s) | 395, 1329, 1445, 1638, 2729 |
| MaeII | ACGT | 2 cut(s) | 836, 1234 |
| MaeIII | GTNAC | 7 cut(s) | 376, 837, 1255, 1430, 1502, 1535, 2547 |
| MalI | GATC | 7 cut(s) | 558, 1080, 1125, 1451, 1473, 1992, 2490 |
| MboI | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| MfeI | CAATTG | 2 cut(s) | 2358, 2792 |
| MhlI | GDGCHC | 2 cut(s) | 57, 1353 |
| MlsI | TGGCCA | 1 cut(s) | 1765 |
| MluNI | TGGCCA | 1 cut(s) | 1765 |
| MlyI | GAGTC | 3 cut(s) | 806, 1700, 2393 |
| MmeI | TCCRAC | 3 cut(s) | 1578, 2516, 2900 |
| Mox20I | TGGCCA | 1 cut(s) | 1765 |
| MroI | TCCGGA | 1 cut(s) | 982 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2102 |
| MscI | TGGCCA | 1 cut(s) | 1765 |
| MseI | TTAA | 6 cut(s) | 1302, 1685, 1785, 2301, 2828, 2926 |
| MslI | CAYNNNNRTG | 6 cut(s) | 383, 984, 1008, 1412, 1856, 2604 |
| Msp20I | TGGCCA | 1 cut(s) | 1765 |
| MspI | CCGG | 3 cut(s) | 540, 983, 1115 |
| MspR9I | CCNGG | 6 cut(s) | 477, 541, 550, 852, 1115, 2757 |
| MunI | CAATTG | 2 cut(s) | 2358, 2792 |
| Mva1269I | GAATGC | 3 cut(s) | 1790, 2245, 2719 |
| MvaI | CCWGG | 4 cut(s) | 477, 550, 852, 2757 |
| MvnI | CGCG | 1 cut(s) | 1246 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 83, 160, 410, 497, 1400, 1556, 1649, 2411, 2504 |
| NciI | CCSGG | 2 cut(s) | 541, 1115 |
| NcoI | CCATGG | 2 cut(s) | 8, 2646 |
| NdeI | CATATG | 1 cut(s) | 217 |
| NdeII | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| NlaIV | GGNNCC | 6 cut(s) | 6, 204, 616, 849, 1350, 1704 |
| NmuCI | GTSAC | 4 cut(s) | 376, 1255, 1502, 1535 |
| NspI | RCATGY | 1 cut(s) | 1022 |
| NspV | TTCGAA | 1 cut(s) | 1137 |
| OliI | CACNNNNGTG | 1 cut(s) | 383 |
| PaeR7I | CTCGAG | 1 cut(s) | 1516 |
| PciSI | GCTCTTC | 1 cut(s) | 2145 |
| PctI | GAATGC | 3 cut(s) | 1790, 2245, 2719 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2102 |
| PfeI | GAWTC | 3 cut(s) | 211, 1047, 1939 |
| PflFI | GACNNNGTC | 1 cut(s) | 2371 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1088, 2838 |
| PleI | GAGTC | 3 cut(s) | 806, 1699, 2392 |
| PpsI | GAGTC | 3 cut(s) | 806, 1699, 2392 |
| PpuMI | RGGWCCY | 2 cut(s) | 202, 1702 |
| PshBI | ATTAAT | 1 cut(s) | 2301 |
| PsiI | TTATAA | 3 cut(s) | 729, 1239, 2484 |
| Psp124BI | GAGCTC | 1 cut(s) | 57 |
| Psp5II | RGGWCCY | 2 cut(s) | 202, 1702 |
| Psp6I | CCWGG | 4 cut(s) | 475, 548, 850, 2755 |
| PspEI | GGTNACC | 1 cut(s) | 1535 |
| PspFI | CCCAGC | 1 cut(s) | 491 |
| PspGI | CCWGG | 4 cut(s) | 475, 548, 850, 2755 |
| PspN4I | GGNNCC | 6 cut(s) | 6, 204, 616, 849, 1350, 1704 |
| PspPI | GGNCC | 4 cut(s) | 4, 202, 484, 1702 |
| PspPPI | RGGWCCY | 2 cut(s) | 202, 1702 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1649 |
| PsyI | GACNNNGTC | 1 cut(s) | 2371 |
| RsaI | GTAC | 4 cut(s) | 924, 1891, 2346, 2435 |
| RsaNI | GTAC | 4 cut(s) | 923, 1890, 2345, 2434 |
| RseI | CAYNNNNRTG | 6 cut(s) | 383, 984, 1008, 1412, 1856, 2604 |
| SacI | GAGCTC | 1 cut(s) | 57 |
| SapI | GCTCTTC | 1 cut(s) | 2145 |
| SaqAI | TTAA | 6 cut(s) | 1302, 1685, 1785, 2301, 2828, 2926 |
| Sau3AI | GATC | 7 cut(s) | 556, 1078, 1123, 1449, 1471, 1990, 2488 |
| Sau96I | GGNCC | 4 cut(s) | 4, 202, 484, 1702 |
| ScaI | AGTACT | 1 cut(s) | 2346 |
| SchI | GAGTC | 3 cut(s) | 806, 1700, 2393 |
| ScrFI | CCNGG | 6 cut(s) | 477, 541, 550, 852, 1115, 2757 |
| SduI | GDGCHC | 2 cut(s) | 57, 1353 |
| SfaNI | GCATC | 9 cut(s) | 316, 988, 1012, 1054, 1218, 1521, 1936, 2125, 2392 |
| SfcI | CTRYAG | 2 cut(s) | 117, 745 |
| Sfr274I | CTCGAG | 1 cut(s) | 1516 |
| SfuI | TTCGAA | 1 cut(s) | 1137 |
| SinI | GGWCC | 4 cut(s) | 4, 202, 484, 1702 |
| SlaI | CTCGAG | 1 cut(s) | 1516 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 383, 984, 1008, 1412, 1856, 2604 |
| SmlI | CTYRAG | 4 cut(s) | 1160, 1268, 1490, 1516 |
| SmoI | CTYRAG | 4 cut(s) | 1160, 1268, 1490, 1516 |
| SsiI | CCGC | 5 cut(s) | 87, 365, 442, 445, 2752 |
| SspMI | CTAG | 5 cut(s) | 395, 1329, 1445, 1638, 2729 |
| SstI | GAGCTC | 1 cut(s) | 57 |
| StyD4I | CCNGG | 6 cut(s) | 475, 539, 548, 850, 1113, 2755 |
| StyI | CCWWGG | 3 cut(s) | 8, 198, 2646 |
| TaaI | ACNGT | 8 cut(s) | 125, 234, 611, 1541, 1596, 2172, 2276, 2371 |
| TaiI | ACGT | 2 cut(s) | 839, 1237 |
| TaqI | TCGA | 5 cut(s) | 662, 1137, 1517, 2215, 2621 |
| TatI | WGTACW | 1 cut(s) | 2344 |
| TauI | GCSGC | 3 cut(s) | 89, 445, 2755 |
| TfiI | GAWTC | 3 cut(s) | 211, 1047, 1939 |
| Tru1I | TTAA | 6 cut(s) | 1302, 1685, 1785, 2301, 2828, 2926 |
| Tru9I | TTAA | 6 cut(s) | 1302, 1685, 1785, 2301, 2828, 2926 |
| TscAI | CASTG | 9 cut(s) | 415, 1042, 1186, 1373, 1481, 1650, 2170, 2225, 2336 |
| TseFI | GTSAC | 4 cut(s) | 376, 1255, 1502, 1535 |
| TseI | GCWGC | 7 cut(s) | 413, 625, 628, 1649, 1906, 2405, 2609 |
| Tsp45I | GTSAC | 4 cut(s) | 376, 1255, 1502, 1535 |
| TspGWI | ACGGA | 1 cut(s) | 1020 |
| TspRI | CASTG | 9 cut(s) | 415, 1042, 1186, 1373, 1481, 1650, 2170, 2225, 2336 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2371 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1088, 2838 |
| VpaK11BI | GGWCC | 4 cut(s) | 4, 202, 484, 1702 |
| VspI | ATTAAT | 1 cut(s) | 2301 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 718 |
| XapI | RAATTY | 4 cut(s) | 1085, 1217, 1658, 2905 |
| XbaI | TCTAGA | 1 cut(s) | 1328 |
| XceI | RCATGY | 1 cut(s) | 1022 |
| XhoI | CTCGAG | 1 cut(s) | 1516 |
| XmiI | GTMKAC | 2 cut(s) | 1466, 1694 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2102 |
| XspI | CTAG | 5 cut(s) | 395, 1329, 1445, 1638, 2729 |
| ZrmI | AGTACT | 1 cut(s) | 2346 |