pycom07g24190

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
24934787 .. 24941485
6699 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g24190.22

Sequence Viewer

Length: 3312 bp
ATGCATATTTTGGCATCAAAGACCAACAATACGCATATGATTCGGGCCCACCTTAGGGTTTTTGGAACGCAACCCCACATATTCTACCACTTCATCAGCAACCAGATCAAATTTGCAGCAGCGGCGCCGTCTCTTCTCCGCCGCTTCCACTTTCAGACGCCTCTTCAGTCTTCTCCCCCCGCCGGTAACGCGCCGATGGATAACGGAAAAGGGATTGAAGACCCGGAGAAGAAGAAGAAGAAGGAAGAAAAGGCAAGAGAGAAGGAATTGAAAAAGCAGAAAGCTTTAGAGAAAGCTGCTAAGCTTCAGGCGCAACAAGCGTCGAGTTCTTCGAAAAAGAGTGAAAAGAAGCATGTAAAGCGTTCCAACCAGGAGGAGGAGAATGAAGAGGACTTTATTGATCCAGAGACTCCATTTGGCCAGAAGAAACGGATGTCGAATCTAATGGCGAAAGAGTGGTATGAATGGTGGGAGAAGACAGGGTTCTTTGTGGCAGATGCCAAGAGCTCCAAACCTCCTTTCGTCATTGTTTTGCCACCTCCCAATGTGACTGGTGCCCTTCATATTGGCCATGCTCTTACTGCTGCTGTTGAGGACACTATAATTCGTTGGCGGAGAATGTCTGGTTACAATACCTTGTGGGTGCCTGGAATGGACCATGCTGGCATAGCAACACAGGTGGTTGTAGAAAAGAAGCTAATGCGTGAAAGCCAATTAACCAGGCATGATATTGGTCGCGAGAAATTTGTGGCTGAAGTTTGGAATTGGAAAAATAAGTATGGGGGCACCATTTTACAGCAGCTACGTCGTTTGGGTGCTTCTTTGGACTGGTCCCGTGAGTGCTTTACAATGGATGAGAAAAGATCAAGGGCTGTGACAGAGGCTTTTGTAAGGCTTCATAAGCAAGGGCTTATCTACAGGGATAATCGCCTAGTTAATTGGGATTGTGTCTTGCGGACAGCAATATCTGAAATTGAGGTGGACTATATTGATGTAAAAGAAAGGACGCTACTAAAGGTTCCTGGGTATGAGAACCCTGTAGAATTTGGAGTTTTGACTTCATTTGCTTACCCTTTGGAAGAAGGTTTAGGTGAGATTGTTGTGGCCACTACTAGAGTGGAAACAATGCTTGGTGATACTGCTATTGCTGTACATCCTAATGATGAAAGGTATCAGCATCTTCATGGGAAGCATGCCGTTCATCCTTTTAATGGAAGAAGGATTCGTATAATATGTGATGCAATTCTCGTTGATCCAGAATTTGGGACTGGTGCTGTGAAGATTACACCGGCCCATGATCCTAATGACTTTGATGTTGGAAGGCGTCATAATCTTGAATTTATCAACATCTTTACTGATGATGGAAAAATAAACCAGGATGGTGGAGAATTTGCAGGGATGCCACGTTTCAAAGCCCGAGAGGCAGTGACTGAAGCACTAAAGAAGAAGGGCCTCTTTAAAGATGCCAAGGCCAATGAGATGCGCCTTGGAATTTGCTCTAGAAGTCAAGATGTTGTGGAGCCCATGATAAAGCCCCAGTGGTATGTTAAATGCAGCGGTATGGGAAAAGAAGCCCTTCATGCTGCCATAGATGATGAGAATAGGAAGCTTGAGATCATCCCGAAACAGTATAATGCTGATTGGAAGAGATGGCTTGGGAGCATTCGTGATTGGTGCATTTCAAGGCAACTCTGGTGGGGTCACCGTGTTCCTGCATGGTATGTTGTTTATGAGGGTGATAGTCCAGACAATTTTGGAGCATCAGATGAGCGATGGGTGGTTGCAAGAAACGAAGAAGAGGCCAAAGCACAGGCTAGTCTAACATTTGAGGGGAAATTTCAGTTAATGCAGGATCCTGATGTGCTTGACACGTGGTTTTCTTCTGGTCTTTTCCCATTGTCTGTGTTGGGCTGGCCGGATGATACAGAAGATCTGAAGGCATTTTATCCTACTTCAGTTCTTGAAACCGGGCATGACATTCTCTTTTTCTGGGTTGCTCGTATGGTAATGCTTGGAATTACTTTGGGTGGCAACGTACCTTTTACAAAGGTATATTTGCACCCTATGATTCGTGATGCACATGGGCGTAAAATGTCCAAGTCCTTGGGGAATGTCATTGATCCTCTTGAGGTAATAAATGGTATTACCCTTGAAGGTCTCCATCAGAGGCTTTTAGAGGGAAATATGGATCCCAAGGAATTGACTGTAGCCAAAGAAGGGCAAGTAAAGGACTTTCCTAAGGGTATTGAGGAATGCGGTGCAGATGCTCTCCGTTTTGCCCTTGTCTCTTACACTGCTCAGTCTGATAAGATAAATCTAGACATCCAAAGGGTTGTGGGTTATCGTCAATGGTGTAATAAACTGTGGAATGCAGTACGATTTGCTATGAGCAGGCTTGGGGATGATTATGTTCCCCCCTCAGATGTAAATCCAGACGCGCTTCCATTTAGTTGCCAGTGGATACTTTCAGTACTAAACAAAGTCATCTCCAAAGCTGTTTTGTCACTGGAAGCGTATGACTTCTCGTATGCAGCCACTGCAGTGTATGCCTGGTGGCAGTACCAATTGTGCGATGTCTTTATTGAAGCTATCAAGCCTTACTTTTCGGGCAACAATCCAAAGTTCGAGTCTGAAAGGGGTTTTGCACAAGCCACACTATGGTTATGTCTTGACAATGGTCTGCGGTTGCTTCATCCATTTATGCCATTCGTCACAGAAGAACTGTGGCAGCGCCTTCCATCACCAAAGGATCACAAGAGGCCAGCCTCAATTATGATATGCCAATATCCTTCCACTGTAGAGTGCTGGACAAATGAAAGGGCGGAGTCCGAGATGAATCTTATAGATTCTGTTGTGAAATCTCTTCGTTCACTTGCAAAAGAAAGTCGTGAAAGGCGGCCAGCTTCTGTGCTTTGTCGAACACCATTAGATAGGGAAATAATATGCAGCCGTCAACTGGAGATTGAAACGCTGGCCAATTTGTCATCTTTGACCGTAATCAACGAGAACGATGCTGCTCCAACTGGGTGTGTGGTGGGTGTTGTAAATGAAAACCTTTCTGTTTATCTTAAGCTTCAAGGAAGTCGTTCATTAGAAGCCGACCTTGAAAAGATCCGGAAGAAGATGGAAGACATTAAATTGCAACAGGAGAAGCTATCCAGGGCGATGAATGTAGCCGGTTACAAAGAAAAGGTCCCGGAGAAGATTCAGAAGGCTAACGCGGACAAGCTCGAATCACTCGAGAAGGAAAAATTGTCTCTTGAAGAAGCAAGCCAGCATATGGAAGCACAGATATCGAGCAACGAGCAGTAA

Protein Analysis

1104

Amino Acids

125.67

Weight (kDa)

6.87

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 124, 554, 643, 785
AccB7I CCANNNNNTGG 3 cut(s) 1262, 2658, 3280
AccII CGCG 4 cut(s) 191, 738, 2438, 3221
AccIII TCCGGA 1 cut(s) 3114
AcoI YGGCCR 6 cut(s) 418, 568, 1104, 1913, 2897, 2973
AcsI RAATTY 8 cut(s) 110, 743, 1043, 1259, 1337, 1388, 1491, 1835
AcuI CTGAAG 6 cut(s) 149, 290, 774, 1452, 1938, 1955
AcvI CACGTG 1 cut(s) 1872
AcyI GRCGYC 3 cut(s) 125, 158, 1324
AfaI GTAC 5 cut(s) 1152, 2037, 2376, 2472, 2561
AflII CTTAAG 1 cut(s) 3068
AflIII ACRYGT 1 cut(s) 1869
AjnI CCWGG 7 cut(s) 369, 646, 719, 1021, 1374, 2549, 3158
AjuI GAANNNNNNNTTGG 4 cut(s) 503, 535, 1113, 1145
AleI CACNNNNGTG 1 cut(s) 2540
Alw21I GWGCWC 1 cut(s) 509
Alw26I GTCTC 5 cut(s) 135, 401, 2162, 2290, 3261
AlwNI CAGNNNCTG 3 cut(s) 1430, 2537, 2906
Ama87I CYCGRG 2 cut(s) 1416, 3239
Aor13HI TCCGGA 1 cut(s) 3114
ApaI GGGCCC 1 cut(s) 49
ApoI RAATTY 8 cut(s) 110, 743, 1043, 1259, 1337, 1388, 1491, 1835
ArsI GACNNNNNNTTYG 4 cut(s) 2612, 2644, 3177, 3209
Asp700I GAANNNNTTC 2 cut(s) 1575, 3085
AspLEI GCGC 6 cut(s) 127, 193, 313, 1485, 2440, 2733
AspS9I GGNCC 7 cut(s) 45, 46, 655, 831, 1291, 1450, 3193
AsuC2I CCSGG 3 cut(s) 224, 1969, 3197
AsuHPI GGTGA 5 cut(s) 1103, 1145, 1694, 1748, 2733
AsuII TTCGAA 1 cut(s) 332
AvaI CYCGRG 2 cut(s) 1416, 3239
AvaII GGWCC 3 cut(s) 655, 831, 3193
AxyI CCTNAGG 2 cut(s) 53, 2238
BaeGI GKGCMC 3 cut(s) 49, 559, 788
BalI TGGCCA 4 cut(s) 420, 570, 1106, 2975
BamHI GGATCC 2 cut(s) 1852, 2188
BanI GGYRCC 4 cut(s) 124, 554, 643, 785
BanII GRGCYC 3 cut(s) 49, 509, 1524
BbrPI CACGTG 1 cut(s) 1872
BbsI GAAGAC 4 cut(s) 162, 225, 482, 3135
Bbv12I GWGCWC 1 cut(s) 509
BccI CCATC 8 cut(s) 190, 1355, 1373, 1644, 1767, 2169, 2746, 3118
BceAI ACGGC 3 cut(s) 112, 1181, 2934
BcgI CGANNNNNNTGC 8 cut(s) 23, 57, 788, 822, 2993, 3027, 3276, 3310
BciT130I CCWGG 7 cut(s) 371, 648, 721, 1023, 1376, 2551, 3160
BciVI GTATCC 1 cut(s) 2454
BcnI CCSGG 3 cut(s) 224, 1969, 3197
BcoDI GTCTC 5 cut(s) 135, 401, 2162, 2290, 3261
BfaI CTAG 5 cut(s) 932, 1113, 1500, 1815, 2318
BfmI CTRYAG 5 cut(s) 916, 1038, 2205, 2538, 2796
BfoI RGCGCY 2 cut(s) 128, 2734
BfrI CTTAAG 1 cut(s) 3068
BfuI GTATCC 1 cut(s) 2454
BglI GCCNNNNNGGC 1 cut(s) 1421
BglII AGATCT 1 cut(s) 1930
BlpI GCTNAGC 1 cut(s) 300
BmcAI AGTACT 1 cut(s) 2472
Bme18I GGWCC 3 cut(s) 655, 831, 3193
BmeT110I CYCGRG 2 cut(s) 1416, 3239
BmgT120I GGNCC 7 cut(s) 45, 46, 655, 831, 1291, 1450, 3193
BmrI ACTGGG 2 cut(s) 1531, 3033
BmuI ACTGGG 2 cut(s) 1531, 3033
BoxI GACNNNNGTC 1 cut(s) 2676
BpiI GAAGAC 4 cut(s) 162, 225, 482, 3135
BpmI CTGGAG 1 cut(s) 2978
Bpu1102I GCTNAGC 1 cut(s) 300
Bpu14I TTCGAA 1 cut(s) 332
BpuEI CTTGAG 2 cut(s) 1631, 2147
BpuMI CCSGG 3 cut(s) 224, 1969, 3197
BsaAI YACGTR 1 cut(s) 1872
BsaBI GATNNNNATC 1 cut(s) 2427
BsaHI GRCGYC 3 cut(s) 125, 158, 1324
BsaI GGTCTC 1 cut(s) 2162
BsaJI CCNNGG 6 cut(s) 1022, 1467, 1486, 2103, 2193, 3159
BsaWI WCCGGW 1 cut(s) 3114
BsaXI ACNNNNNCTCC 2 cut(s) 1651, 1681
Bse118I RCCGGY 3 cut(s) 182, 1288, 3176
Bse1I ACTGG 8 cut(s) 556, 833, 1273, 1537, 2455, 2511, 2961, 3028
Bse21I CCTNAGG 2 cut(s) 53, 2238
Bse8I GATNNNNATC 1 cut(s) 2427
BseAI TCCGGA 1 cut(s) 3114
BseBI CCWGG 7 cut(s) 371, 648, 721, 1023, 1376, 2551, 3160
BseDI CCNNGG 6 cut(s) 1022, 1467, 1486, 2103, 2193, 3159
BseJI GATNNNNATC 1 cut(s) 2427
BseMII CTCAG 2 cut(s) 2312, 2433
BseNI ACTGG 8 cut(s) 556, 833, 1273, 1537, 2455, 2511, 2961, 3028
BseRI GAGGAG 2 cut(s) 389, 392
BseSI GKGCMC 3 cut(s) 49, 559, 788
BsgI GTGCAG 1 cut(s) 2280
Bsh1236I CGCG 4 cut(s) 191, 738, 2438, 3221
BshNI GGYRCC 4 cut(s) 124, 554, 643, 785
BsiHKAI GWGCWC 1 cut(s) 509
BsiHKCI CYCGRG 2 cut(s) 1416, 3239
BsiSI CCGG 8 cut(s) 183, 224, 1289, 1916, 1968, 3115, 3177, 3197
BslFI GGGAC 3 cut(s) 817, 1279, 3179
BsmAI GTCTC 5 cut(s) 135, 401, 2162, 2290, 3261
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 3 cut(s) 817, 1279, 3179
BsmI GAATGC 3 cut(s) 1662, 2258, 2374
Bso31I GGTCTC 1 cut(s) 2162
BsoBI CYCGRG 2 cut(s) 1416, 3239
Bsp119I TTCGAA 1 cut(s) 332
Bsp120I GGGCCC 1 cut(s) 45
Bsp1286I GDGCHC 5 cut(s) 49, 509, 559, 788, 1524
Bsp13I TCCGGA 1 cut(s) 3114
Bsp1407I TGTACA 1 cut(s) 1150
Bsp1720I GCTNAGC 1 cut(s) 300
Bsp68I TCGCGA 1 cut(s) 738
BspCNI CTCAG 2 cut(s) 2311, 2432
BspEI TCCGGA 1 cut(s) 3114
BspFNI CGCG 4 cut(s) 191, 738, 2438, 3221
BspMAI CTGCAG 1 cut(s) 2542
BspT104I TTCGAA 1 cut(s) 332
BspT107I GGYRCC 4 cut(s) 124, 554, 643, 785
BspTI CTTAAG 1 cut(s) 3068
BspTNI GGTCTC 1 cut(s) 2162
BsrFI RCCGGY 3 cut(s) 182, 1288, 3176
BsrGI TGTACA 1 cut(s) 1150
BsrI ACTGG 8 cut(s) 556, 833, 1273, 1537, 2455, 2511, 2961, 3028
BssAI RCCGGY 3 cut(s) 182, 1288, 3176
BssECI CCNNGG 6 cut(s) 1022, 1467, 1486, 2103, 2193, 3159
BssNI GRCGYC 3 cut(s) 125, 158, 1324
BssT1I CCWWGG 4 cut(s) 1467, 1486, 2103, 2193
Bst2UI CCWGG 7 cut(s) 371, 648, 721, 1023, 1376, 2551, 3160
Bst4CI ACNGT 7 cut(s) 1629, 1706, 2206, 2364, 2724, 2797, 2995
Bst6I CTCTTC 6 cut(s) 138, 168, 381, 1640, 1791, 2868
BstACI GRCGYC 3 cut(s) 125, 158, 1324
BstAFI CTTAAG 1 cut(s) 3068
BstAPI GCANNNNNTGC 2 cut(s) 2537, 2546
BstAUI TGTACA 1 cut(s) 1150
BstBAI YACGTR 1 cut(s) 1872
BstBI TTCGAA 1 cut(s) 332
BstC8I GCNNGC 9 cut(s) 664, 1194, 1913, 2393, 2763, 2901, 2973, 3271, 3275
BstDEI CTNAG 5 cut(s) 53, 300, 2238, 2298, 2419
BstEII GGTNACC 1 cut(s) 1700
BstFNI CGCG 4 cut(s) 191, 738, 2438, 3221
BstH2I RGCGCY 2 cut(s) 128, 2734
BstHHI GCGC 6 cut(s) 127, 193, 313, 1485, 2440, 2733
BstMAI GTCTC 5 cut(s) 135, 401, 2162, 2290, 3261
BstNI CCWGG 7 cut(s) 371, 648, 721, 1023, 1376, 2551, 3160
BstNSI RCATGY 2 cut(s) 356, 1196
BstPAI GACNNNNGTC 1 cut(s) 2676
BstPI GGTNACC 1 cut(s) 1700
BstSFI CTRYAG 5 cut(s) 916, 1038, 2205, 2538, 2796
BstSLI GKGCMC 3 cut(s) 49, 559, 788
BstUI CGCG 4 cut(s) 191, 738, 2438, 3221
BstV2I GAAGAC 4 cut(s) 162, 225, 482, 3135
BstX2I RGATCY 4 cut(s) 1852, 1930, 2188, 3111
BstXI CCANNNNNNTGG 2 cut(s) 1382, 2104
BstYI RGATCY 4 cut(s) 1852, 1930, 2188, 3111
Bsu36I CCTNAGG 2 cut(s) 53, 2238
BsuI GTATCC 1 cut(s) 2454
BtgZI GCGATG 3 cut(s) 1786, 2586, 3179
BtsI GCAGTG 4 cut(s) 1431, 2292, 2535, 2547
BtsIMutI CAGTG 8 cut(s) 1431, 1544, 2292, 2462, 2504, 2535, 2547, 2793
BtuMI TCGCGA 1 cut(s) 738
Cac8I GCNNGC 9 cut(s) 664, 1194, 1913, 2393, 2763, 2901, 2973, 3271, 3275
CaiI CAGNNNCTG 3 cut(s) 1430, 2537, 2906
CfoI GCGC 6 cut(s) 127, 193, 313, 1485, 2440, 2733
Cfr10I RCCGGY 3 cut(s) 182, 1288, 3176
Cfr13I GGNCC 7 cut(s) 45, 46, 655, 831, 1291, 1450, 3193
CseI GACGC 5 cut(s) 166, 309, 1015, 1313, 2444
Csp6I GTAC 5 cut(s) 1151, 2036, 2375, 2471, 2560
CspCI CAANNNNNGTGG 4 cut(s) 660, 695, 1676, 1711
CviQI GTAC 5 cut(s) 1151, 2036, 2375, 2471, 2560
DdeI CTNAG 5 cut(s) 53, 300, 2238, 2298, 2419
DinI GGCGCC 1 cut(s) 126
DraI TTTAAA 1 cut(s) 1459
EaeI YGGCCR 6 cut(s) 418, 568, 1104, 1913, 2897, 2973
Eam1104I CTCTTC 6 cut(s) 138, 168, 381, 1640, 1791, 2868
EarI CTCTTC 6 cut(s) 138, 168, 381, 1640, 1791, 2868
EciI GGCGGA 3 cut(s) 128, 628, 2837
Ecl136II GAGCTC 1 cut(s) 507
Eco130I CCWWGG 4 cut(s) 1467, 1486, 2103, 2193
Eco24I GRGCYC 3 cut(s) 49, 509, 1524
Eco31I GGTCTC 1 cut(s) 2162
Eco32I GATATC 1 cut(s) 3294
Eco47I GGWCC 3 cut(s) 655, 831, 3193
Eco53kI GAGCTC 1 cut(s) 507
Eco57I CTGAAG 6 cut(s) 149, 290, 774, 1452, 1938, 1955
Eco72I CACGTG 1 cut(s) 1872
Eco81I CCTNAGG 2 cut(s) 53, 2238
Eco88I CYCGRG 2 cut(s) 1416, 3239
Eco91I GGTNACC 1 cut(s) 1700
EcoICRI GAGCTC 1 cut(s) 507
EcoO109I RGGNCCY 2 cut(s) 1450, 3193
EcoO65I GGTNACC 1 cut(s) 1700
EcoRII CCWGG 7 cut(s) 369, 646, 719, 1021, 1374, 2549, 3158
EcoRV GATATC 1 cut(s) 3294
EcoT14I CCWWGG 4 cut(s) 1467, 1486, 2103, 2193
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 49, 509, 1524
EgeI GGCGCC 1 cut(s) 126
EheI GGCGCC 1 cut(s) 126
ErhI CCWWGG 4 cut(s) 1467, 1486, 2103, 2193
Esp3I CGTCTC 1 cut(s) 135
FalI AAGNNNNNCTT 8 cut(s) 1439, 1471, 1560, 1592, 2585, 2617, 3087, 3119
FaqI GGGAC 3 cut(s) 817, 1279, 3179
FauI CCCGC 1 cut(s) 187
FauNDI CATATG 2 cut(s) 36, 3279
FriOI GRGCYC 3 cut(s) 49, 509, 1524
FspBI CTAG 5 cut(s) 932, 1113, 1500, 1815, 2318
GlaI GCGC 6 cut(s) 126, 192, 312, 1484, 2439, 2732
GsuI CTGGAG 1 cut(s) 2978
HaeII RGCGCY 2 cut(s) 128, 2734
HapII CCGG 8 cut(s) 183, 224, 1289, 1916, 1968, 3115, 3177, 3197
HgaI GACGC 5 cut(s) 166, 309, 1015, 1313, 2444
HhaI GCGC 6 cut(s) 127, 193, 313, 1485, 2440, 2733
Hin1I GRCGYC 3 cut(s) 125, 158, 1324
Hin6I GCGC 6 cut(s) 125, 191, 311, 1483, 2438, 2731
HinP1I GCGC 6 cut(s) 125, 191, 311, 1483, 2438, 2731
HincII GTYRAC 1 cut(s) 2954
HindII GTYRAC 1 cut(s) 2954
HindIII AAGCTT 4 cut(s) 282, 302, 1607, 3071
HpaII CCGG 8 cut(s) 183, 224, 1289, 1916, 1968, 3115, 3177, 3197
HphI GGTGA 5 cut(s) 1103, 1145, 1694, 1748, 2733
Hpy166II GTNNAC 3 cut(s) 982, 2870, 2954
Hpy8I GTNNAC 3 cut(s) 982, 2870, 2954
Hpy99I CGWCG 2 cut(s) 325, 810
HpyCH4III ACNGT 7 cut(s) 1629, 1706, 2206, 2364, 2724, 2797, 2995
HpyCH4IV ACGT 4 cut(s) 805, 1405, 1871, 2034
HpyF3I CTNAG 5 cut(s) 53, 300, 2238, 2298, 2419
HpySE526I ACGT 4 cut(s) 805, 1405, 1871, 2034
Hsp92I GRCGYC 3 cut(s) 125, 158, 1324
HspAI GCGC 6 cut(s) 125, 191, 311, 1483, 2438, 2731
KasI GGCGCC 1 cut(s) 124
Kpn2I TCCGGA 1 cut(s) 3114
LmnI GCTCC 5 cut(s) 512, 1519, 1659, 1757, 3022
MaeI CTAG 5 cut(s) 932, 1113, 1500, 1815, 2318
MaeII ACGT 4 cut(s) 805, 1405, 1871, 2034
MaeIII GTNAC 9 cut(s) 185, 547, 626, 874, 1426, 1700, 2502, 2710, 3179
MfeI CAATTG 1 cut(s) 2564
MflI RGATCY 4 cut(s) 1852, 1930, 2188, 3111
MhlI GDGCHC 5 cut(s) 49, 509, 559, 788, 1524
MlsI TGGCCA 4 cut(s) 420, 570, 1106, 2975
MluNI TGGCCA 4 cut(s) 420, 570, 1106, 2975
Mly113I GGCGCC 1 cut(s) 125
MlyI GAGTC 3 cut(s) 403, 2636, 2834
MmeI TCCRAC 3 cut(s) 390, 1297, 3044
Mox20I TGGCCA 4 cut(s) 420, 570, 1106, 2975
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 3114
MroXI GAANNNNTTC 2 cut(s) 1575, 3085
MscI TGGCCA 4 cut(s) 420, 570, 1106, 2975
MseI TTAA 8 cut(s) 716, 936, 1209, 1458, 1548, 1844, 3069, 3135
MslI CAYNNNNRTG 3 cut(s) 1158, 1182, 2540
Msp20I TGGCCA 4 cut(s) 420, 570, 1106, 2975
MspA1I CMGCKG 2 cut(s) 122, 1557
MspCI CTTAAG 1 cut(s) 3068
MspI CCGG 8 cut(s) 183, 224, 1289, 1916, 1968, 3115, 3177, 3197
MunI CAATTG 1 cut(s) 2564
Mva1269I GAATGC 3 cut(s) 1662, 2258, 2374
MvaI CCWGG 7 cut(s) 371, 648, 721, 1023, 1376, 2551, 3160
MvnI CGCG 4 cut(s) 191, 738, 2438, 3221
NarI GGCGCC 1 cut(s) 125
NciI CCSGG 3 cut(s) 224, 1969, 3197
NdeI CATATG 2 cut(s) 36, 3279
NmuCI GTSAC 6 cut(s) 547, 874, 1426, 1700, 2502, 2710
NruI TCGCGA 1 cut(s) 738
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 356, 1196
NspV TTCGAA 1 cut(s) 332
OliI CACNNNNGTG 1 cut(s) 2540
PaeI GCATGC 1 cut(s) 1196
PaeR7I CTCGAG 1 cut(s) 3239
PcsI WCGNNNNNNNCGW 2 cut(s) 329, 3237
PctI GAATGC 3 cut(s) 1662, 2258, 2374
PdmI GAANNNNTTC 2 cut(s) 1575, 3085
PfeI GAWTC 8 cut(s) 40, 439, 1222, 2068, 2836, 2846, 3205, 3233
PflMI CCANNNNNTGG 3 cut(s) 1262, 2658, 3280
PfoI TCCNGGA 1 cut(s) 3195
PleI GAGTC 3 cut(s) 403, 2635, 2833
PluTI GGCGCC 1 cut(s) 128
PmaCI CACGTG 1 cut(s) 1872
PmlI CACGTG 1 cut(s) 1872
PpsI GAGTC 3 cut(s) 403, 2635, 2833
Ppu21I YACGTR 1 cut(s) 1872
PpuMI RGGWCCY 1 cut(s) 3193
PshAI GACNNNNGTC 1 cut(s) 2676
Psp124BI GAGCTC 1 cut(s) 509
Psp5II RGGWCCY 1 cut(s) 3193
Psp6I CCWGG 7 cut(s) 369, 646, 719, 1021, 1374, 2549, 3158
PspCI CACGTG 1 cut(s) 1872
PspEI GGTNACC 1 cut(s) 1700
PspGI CCWGG 7 cut(s) 369, 646, 719, 1021, 1374, 2549, 3158
PspOMI GGGCCC 1 cut(s) 45
PspPI GGNCC 7 cut(s) 45, 46, 655, 831, 1291, 1450, 3193
PspPPI RGGWCCY 1 cut(s) 3193
PstI CTGCAG 1 cut(s) 2542
PstNI CAGNNNCTG 3 cut(s) 1430, 2537, 2906
PsuI RGATCY 4 cut(s) 1852, 1930, 2188, 3111
RruI TCGCGA 1 cut(s) 738
RsaI GTAC 5 cut(s) 1152, 2037, 2376, 2472, 2561
RsaNI GTAC 5 cut(s) 1151, 2036, 2375, 2471, 2560
RseI CAYNNNNRTG 3 cut(s) 1158, 1182, 2540
SacI GAGCTC 1 cut(s) 509
SaqAI TTAA 8 cut(s) 716, 936, 1209, 1458, 1548, 1844, 3069, 3135
Sau96I GGNCC 7 cut(s) 45, 46, 655, 831, 1291, 1450, 3193
ScaI AGTACT 1 cut(s) 2472
SchI GAGTC 3 cut(s) 403, 2636, 2834
SduI GDGCHC 5 cut(s) 49, 509, 559, 788, 1524
SfcI CTRYAG 5 cut(s) 916, 1038, 2205, 2538, 2796
SfoI GGCGCC 1 cut(s) 126
Sfr274I CTCGAG 1 cut(s) 3239
SfuI TTCGAA 1 cut(s) 332
SinI GGWCC 3 cut(s) 655, 831, 3193
SlaI CTCGAG 1 cut(s) 3239
SmiMI CAYNNNNRTG 3 cut(s) 1158, 1182, 2540
SmlI CTYRAG 4 cut(s) 1610, 2126, 3068, 3239
SmoI CTYRAG 4 cut(s) 1610, 2126, 3068, 3239
SphI GCATGC 1 cut(s) 1196
SspDI GGCGCC 1 cut(s) 124
SspMI CTAG 5 cut(s) 932, 1113, 1500, 1815, 2318
SstI GAGCTC 1 cut(s) 509
StyI CCWWGG 4 cut(s) 1467, 1486, 2103, 2193
TaaI ACNGT 7 cut(s) 1629, 1706, 2206, 2364, 2724, 2797, 2995
TaiI ACGT 4 cut(s) 808, 1408, 1874, 2037
TaqI TCGA 8 cut(s) 323, 332, 437, 2625, 2917, 3231, 3240, 3296
TatI WGTACW 2 cut(s) 1150, 2470
TauI GCSGC 3 cut(s) 125, 144, 2899
TfiI GAWTC 8 cut(s) 40, 439, 1222, 2068, 2836, 2846, 3205, 3233
Tru1I TTAA 8 cut(s) 716, 936, 1209, 1458, 1548, 1844, 3069, 3135
Tru9I TTAA 8 cut(s) 716, 936, 1209, 1458, 1548, 1844, 3069, 3135
TscAI CASTG 8 cut(s) 1431, 1544, 2299, 2462, 2511, 2542, 2547, 2800
TseFI GTSAC 6 cut(s) 547, 874, 1426, 1700, 2502, 2710
Tsp45I GTSAC 6 cut(s) 547, 874, 1426, 1700, 2502, 2710
TspGWI ACGGA 3 cut(s) 219, 445, 2261
TspRI CASTG 8 cut(s) 1431, 1544, 2299, 2462, 2511, 2542, 2547, 2800
Van91I CCANNNNNTGG 3 cut(s) 1262, 2658, 3280
Vha464I CTTAAG 1 cut(s) 3068
VpaK11BI GGWCC 3 cut(s) 655, 831, 3193
XapI RAATTY 8 cut(s) 110, 743, 1043, 1259, 1337, 1388, 1491, 1835
XbaI TCTAGA 2 cut(s) 1499, 2317
XceI RCATGY 2 cut(s) 356, 1196
XcmI CCANNNNNNNNNTGG 1 cut(s) 1114
XhoI CTCGAG 1 cut(s) 3239
XmnI GAANNNNTTC 2 cut(s) 1575, 3085
XspI CTAG 5 cut(s) 932, 1113, 1500, 1815, 2318
ZrmI AGTACT 1 cut(s) 2472
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.