Rw7G035320

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
52642381 .. 52648046
5666 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G035320.1

Sequence Viewer

Length: 2412 bp
ATGGACATCACAGTCATGGACGACAATTCATCGAAGAAGAAGAAGAAGAAGAAAAAGGAGGAAAAGGCAAGATTTCACGAACTGAAAAAGCAAAAGGCTTTAGAGAAAGCTTCCAAGCTTCAGGCGCACAAAGCTAATCCTACGAACAGTGAAAAGAAGAAACTTCGCAACGAGGACGCCGGCGATAATGCCAGTGATGTCATTGACCCTCCGACCCCAGTTGGCGAGAAGAAACGATTGTCTCCTCAAATGGCTAAACACTACAGTCCAAGTGATGTAGAGAAGTGGTGGTATGAGTGGTGGGAGGAACAAGGCTACGCTGTCCCAGATCCTACTAGTCACAAACCTATATTTGCCATGCTCCTGCCGCCTCCCAATGTGACTGGTGCCCTTCATTTAGGCCATGCTCTTACTGCTGCTATTCAGGACAATATTATTCGTTGGCGGAGAATGTCAGGTTATAATACCTTGTGGGTGCCTGGACTTGACCATGCTGGCATAGCAACACAGGTTGTTGTGGAAAAAAAGCTAATGCGTGAAAGCGGTAAAACCAGACATGATATCGGTCGCGAGGAATTTATCTCTAAAGTTTGGGATTGGAAAATTGAGTATGGGGGCACCATTTTACAGCAGCTACGTCGTTTGGGTGCTTCTTTAGATTGGTCCCATGAGTGCTTTACAATGGATGAGAAAAGTTCAAAGGCCGTTGCAGAAGCTTTTGTTAGGCTACATAATCAAGGACTCATCTACAGGGATAATCGCATAGTGAACTGGGATTGTGTGTTGCGGACCGCAATATCTGATATTGAGGTGGATCCTCCAATTGAAATAAAAGAAATGACACTACTAGAAGTTCCTGGATATGAGAACCCTGTTGAATTTGGTGTTTTGACTTTATTTGCATATCCTGTGGAAGAAGATTTAGGTGAGATAGTTGTAGCCACTACCCGAATAGAGACGATGCTTGGTGATACTGCTATTGCAGTGCATCCTGATGACGAAAGATATAAGCATCTTCATGGAAAACATGCAATCCATCCATTTAATGGAAGAAGGATTCCTATAATAAGTGATGAAATTCTTGTTGATCCAGAGTTTGGGACTGGTGCTGTCAAGATTACCCCGGCCCATGATCCTAATGACTTTATGGTTGGGAAGCGCCATAATCTTGAGTTTATCAATATCTTTACTGATGATGGAAAAATAAACCAGTATGGGGGAGCATTTGAAGGGATGCCACGCTTCAGTGCCCGAGAGGCTGTGACTGATGCATTAAAGAAGAAGGGCCTCTTCAAAGAAACTAAGACCAATGAGATGTGTCTTAGAATTTGCTCTAGAAGTAAAGATGTCGTGGAGCCTATGATAAAGCCCCAATGGTACATTAAATGCAGCGATATGGGAAATGAAGCTCTCAATGCTGTCGCTGATGATGAAAATAGGAAGCTGGAAATTATCCCAAGACAGTATACTGCTGAGTGGAAGAGATGGCTTCATAACATCAGTGATTGGTGTGTCTCAAGGCAACTTTGGTGGGGTCACCGTGTTCCAGCATGGTATGTTGTTTTTGAGGGTGATGACAACGAAGAATTTGGAAAAAATTTTGAGCGATGGGTGGTTGCTAGAAGTGAGGAAGAGGCTCAAGCATTGGCTGATAAAAAATATGAGGGAAAGAAGTTTCGATTAGAACAGGACACAGATGTGCTTGACACGTGGTTTTCGTCTGGTCTTTTCCCATTGTTTGCATTGGGCTGGCCGGATGATACAGATGATTTCAAAACTTTTTATCCAAATTCAGTTGTTGAAACTGGGCACGACATTCTCTTTTTCTGGGTTGCTCGTATGGTGATGCTTGGAATTACATTGGGTGGTAATGTTCCCTTTACAAAGGTATACTTACACCCAATGGTTCGAGATGCACACGGGCGTAAAATGTCAAAGGGCTTGGGCAATGTCATTGACCCTGTTGACATAATAAATGGTATCACCCTAGAACGTCTACATGATAGACTTTTAGAGGGAAATCTGGACCCCAAGGAATTAGATAAGGCCAGAGAGGGACAATTGAAGGACTTCCCTGATGGTATTCCTGAGTGTGGTGCGGATGCTCTGCGGTTTTCTCTTATCTCGTACACTGCTCAGTCCGATAAGATAAATCTGGATATCCAAAGGGTTGTGGGTTACCGTCAGTGGTGTAACAAACTTTGGAATGCAGTGCGATTTGCTTTGGGTATACTTGGGGATGATTATGTTCCGCCCTCAAATGTAAATCCAGATGTGTTGCCATTCAGTTGCCGATGGATTCTCTCAGTGCTAAATGAAGCCATATCCAAAACTGTTATGTCATTGGGAATCATACGAGTTCTCAGATGCAGCAACTGCTGTTTATGCTTGGTGGCAGTACCAGCTGTGTGA

Protein Analysis

803

Amino Acids

91.61

Weight (kDa)

6.08

Isoelectric Point (pI)

38.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 97 - 719 5.7e-141 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1_2 PF13603 340 - 399 3.1e-07 Leucyl-tRNA synthetase, editing domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AasI GACNNNNNNGTC 1 cut(s) 11
AccB1I GGYRCC 3 cut(s) 386, 475, 617
AccB7I CCANNNNNTGG 2 cut(s) 1046, 1097
AccI GTMKAC 4 cut(s) 1466, 1890, 1996, 2230
AccII CGCG 1 cut(s) 570
AciI CCGC 8 cut(s) 368, 445, 543, 787, 792, 2099, 2110, 2252
AclWI GGATC 5 cut(s) 323, 809, 822, 1082, 1127
AcoI YGGCCR 1 cut(s) 1751
AcsI RAATTY 7 cut(s) 575, 878, 1077, 1326, 1586, 1597, 1789
AcuI CTGAAG 2 cut(s) 104, 1228
AcvI CACGTG 1 cut(s) 1710
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 3 cut(s) 1379, 2129, 2400
AfiI CCNNNNNNNGG 4 cut(s) 1046, 1097, 1216, 2093
AflIII ACRYGT 1 cut(s) 1707
AgsI TTSAA 8 cut(s) 699, 827, 878, 1229, 1294, 1774, 1802, 2065
AhlI ACTAGT 1 cut(s) 335
AjnI CCWGG 2 cut(s) 478, 856
AleI CACNNNNGTG 1 cut(s) 1697
AluBI AGCT 9 cut(s) 110, 118, 134, 529, 634, 716, 1409, 1444, 2405
AluI AGCT 9 cut(s) 110, 118, 134, 529, 634, 716, 1409, 1444, 2405
Alw26I GTCTC 3 cut(s) 246, 950, 1519
AlwI GGATC 5 cut(s) 323, 809, 822, 1082, 1127
AlwNI CAGNNNCTG 1 cut(s) 2376
Ama87I CYCGRG 1 cut(s) 1251
AoxI GGCC 6 cut(s) 400, 702, 1125, 1285, 1751, 2046
ApeKI GCWGC 4 cut(s) 416, 631, 1389, 2370
ApoI RAATTY 7 cut(s) 575, 878, 1077, 1326, 1586, 1597, 1789
Asp700I GAANNNNTTC 1 cut(s) 2069
AspLEI GCGC 2 cut(s) 127, 1161
AspS9I GGNCC 5 cut(s) 663, 789, 1126, 1285, 2026
AsuC2I CCSGG 1 cut(s) 1124
AsuHPI GGTGA 6 cut(s) 938, 980, 1529, 1583, 1855, 1975
AvaI CYCGRG 1 cut(s) 1251
AvaII GGWCC 3 cut(s) 663, 789, 2026
BaeGI GKGCMC 4 cut(s) 391, 620, 1252, 1812
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 3 cut(s) 386, 475, 617
BbrPI CACGTG 1 cut(s) 1710
BbvI GCAGC 4 cut(s) 403, 643, 1401, 2382
BccI CCATC 6 cut(s) 1044, 1190, 1479, 1602, 2072, 2289
BceAI ACGGC 1 cut(s) 689
BcgI CGANNNNNNTGC 2 cut(s) 620, 654
BciT130I CCWGG 2 cut(s) 480, 858
BcnI CCSGG 1 cut(s) 1124
BcoDI GTCTC 3 cut(s) 246, 950, 1519
BcuI ACTAGT 1 cut(s) 335
BfaI CTAG 5 cut(s) 336, 848, 1335, 1620, 1988
BfmI CTRYAG 2 cut(s) 262, 748
BfoI RGCGCY 1 cut(s) 1162
BglI GCCNNNNNGGC 1 cut(s) 1256
BisI GCNGC 5 cut(s) 368, 417, 632, 1390, 2371
BlsI GCNGC 5 cut(s) 369, 418, 633, 1391, 2372
Bme1390I CCNGG 3 cut(s) 480, 858, 1124
Bme18I GGWCC 3 cut(s) 663, 789, 2026
BmeT110I CYCGRG 1 cut(s) 1251
BmgT120I GGNCC 5 cut(s) 663, 789, 1126, 1285, 2026
BmiI GGNNCC 7 cut(s) 388, 477, 619, 665, 816, 1356, 2028
BmrFI CCNGG 3 cut(s) 480, 858, 1124
BmrI ACTGGG 3 cut(s) 212, 781, 1815
BmsI GCATC 9 cut(s) 951, 997, 1021, 1224, 1258, 1836, 1903, 2092, 2357
BmuI ACTGGG 3 cut(s) 212, 781, 1815
BpuEI CTTGAG 3 cut(s) 1190, 1501, 1623
BpuMI CCSGG 1 cut(s) 1124
BsaAI YACGTR 1 cut(s) 1710
BsaHI GRCGYC 1 cut(s) 177
BsaJI CCNNGG 2 cut(s) 1122, 2031
Bsc4I CCNNNNNNNGG 4 cut(s) 1046, 1097, 1216, 2093
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 7 cut(s) 192, 218, 388, 776, 1108, 1210, 1810
Bse3DI GCAATG 1 cut(s) 1954
BseBI CCWGG 2 cut(s) 480, 858
BseDI CCNNGG 2 cut(s) 1122, 2031
BseGI GGATG 7 cut(s) 691, 988, 1036, 1239, 1762, 2107, 2245
BseLI CCNNNNNNNGG 4 cut(s) 1046, 1097, 1216, 2093
BseMI GCAATG 1 cut(s) 1954
BseMII CTCAG 5 cut(s) 1464, 2079, 2150, 2319, 2377
BseNI ACTGG 7 cut(s) 192, 218, 388, 776, 1108, 1210, 1810
BseRI GAGGAG 1 cut(s) 234
BseSI GKGCMC 4 cut(s) 391, 620, 1252, 1812
BseXI GCAGC 4 cut(s) 403, 643, 1401, 2382
Bsh1236I CGCG 1 cut(s) 570
Bsh1285I CGRYCG 1 cut(s) 568
BshFI GGCC 6 cut(s) 402, 704, 1127, 1287, 1753, 2048
BshNI GGYRCC 3 cut(s) 386, 475, 617
BsiEI CGRYCG 1 cut(s) 568
BsiHKCI CYCGRG 1 cut(s) 1251
BsiSI CCGG 3 cut(s) 180, 1124, 1754
BslFI GGGAC 4 cut(s) 308, 649, 1114, 2070
BslI CCNNNNNNNGG 4 cut(s) 1046, 1097, 1216, 2093
BsmAI GTCTC 3 cut(s) 246, 950, 1519
BsmBI CGTCTC 1 cut(s) 950
BsmFI GGGAC 4 cut(s) 308, 649, 1114, 2070
BsmI GAATGC 1 cut(s) 2212
BsnI GGCC 6 cut(s) 402, 704, 1127, 1287, 1753, 2048
BsoBI CYCGRG 1 cut(s) 1251
Bsp1286I GDGCHC 4 cut(s) 391, 620, 1252, 1812
Bsp143I GATC 4 cut(s) 328, 814, 1087, 1132
Bsp68I TCGCGA 1 cut(s) 570
BspACI CCGC 8 cut(s) 368, 445, 543, 787, 792, 2099, 2110, 2252
BspANI GGCC 6 cut(s) 402, 704, 1127, 1287, 1753, 2048
BspCNI CTCAG 5 cut(s) 1465, 2080, 2149, 2318, 2376
BspFNI CGCG 1 cut(s) 570
BspLI GGNNCC 7 cut(s) 388, 477, 619, 665, 816, 1356, 2028
BspPI GGATC 5 cut(s) 323, 809, 822, 1082, 1127
BspT107I GGYRCC 3 cut(s) 386, 475, 617
BsrDI GCAATG 1 cut(s) 1954
BsrFI RCCGGY 1 cut(s) 179
BsrI ACTGG 7 cut(s) 192, 218, 388, 776, 1108, 1210, 1810
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 2 cut(s) 1122, 2031
BssMI GATC 4 cut(s) 328, 814, 1087, 1132
BssNAI GTATAC 3 cut(s) 1467, 1891, 2231
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 2031
Bst1107I GTATAC 3 cut(s) 1467, 1891, 2231
Bst2UI CCWGG 2 cut(s) 480, 858
Bst4CI ACNGT 7 cut(s) 13, 149, 266, 1464, 1541, 2183, 2335
Bst6I CTCTTC 3 cut(s) 1295, 1475, 1626
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 1 cut(s) 2376
BstBAI YACGTR 1 cut(s) 1710
BstC8I GCNNGC 3 cut(s) 181, 496, 1751
BstDEI CTNAG 7 cut(s) 1302, 1322, 1473, 2088, 2136, 2305, 2363
BstEII GGTNACC 2 cut(s) 1535, 2177
BstF5I GGATG 7 cut(s) 691, 988, 1036, 1239, 1762, 2107, 2245
BstFNI CGCG 1 cut(s) 570
BstH2I RGCGCY 1 cut(s) 1162
BstHHI GCGC 2 cut(s) 127, 1161
BstKTI GATC 4 cut(s) 331, 817, 1090, 1135
BstMAI GTCTC 3 cut(s) 246, 950, 1519
BstMBI GATC 4 cut(s) 328, 814, 1087, 1132
BstMCI CGRYCG 1 cut(s) 568
BstNI CCWGG 2 cut(s) 480, 858
BstNSI RCATGY 1 cut(s) 1031
BstPI GGTNACC 2 cut(s) 1535, 2177
BstSCI CCNGG 3 cut(s) 478, 856, 1122
BstSFI CTRYAG 2 cut(s) 262, 748
BstSLI GKGCMC 4 cut(s) 391, 620, 1252, 1812
BstUI CGCG 1 cut(s) 570
BstV1I GCAGC 4 cut(s) 403, 643, 1401, 2382
BstX2I RGATCY 2 cut(s) 328, 814
BstYI RGATCY 2 cut(s) 328, 814
BstZ17I GTATAC 3 cut(s) 1467, 1891, 2231
BsuRI GGCC 6 cut(s) 402, 704, 1127, 1287, 1753, 2048
BtgZI GCGATG 1 cut(s) 1621
BtsCI GGATG 7 cut(s) 691, 988, 1036, 1239, 1762, 2107, 2245
BtsI GCAGTG 3 cut(s) 990, 2130, 2217
BtsIMutI CAGTG 9 cut(s) 154, 199, 990, 1252, 1507, 2130, 2192, 2217, 2313
BtuMI TCGCGA 1 cut(s) 570
Cac8I GCNNGC 3 cut(s) 181, 496, 1751
CaiI CAGNNNCTG 1 cut(s) 2376
CfoI GCGC 2 cut(s) 127, 1161
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 5 cut(s) 663, 789, 1126, 1285, 2026
CpoI CGGWCCG 1 cut(s) 789
CseI GACGC 1 cut(s) 185
Csp6I GTAC 3 cut(s) 1378, 2128, 2399
CspCI CAANNNNNGTGG 2 cut(s) 1511, 1546
CspI CGGWCCG 1 cut(s) 789
CviQI GTAC 3 cut(s) 1378, 2128, 2399
DdeI CTNAG 7 cut(s) 1302, 1322, 1473, 2088, 2136, 2305, 2363
DpnI GATC 4 cut(s) 330, 816, 1089, 1134
DpnII GATC 4 cut(s) 328, 814, 1087, 1132
DrdI GACNNNNNNGTC 1 cut(s) 11
DseDI GACNNNNNNGTC 1 cut(s) 11
EaeI YGGCCR 1 cut(s) 1751
Eam1104I CTCTTC 3 cut(s) 1295, 1475, 1626
EarI CTCTTC 3 cut(s) 1295, 1475, 1626
EciI GGCGGA 2 cut(s) 460, 2241
Eco130I CCWWGG 1 cut(s) 2031
Eco32I GATATC 2 cut(s) 562, 2161
Eco47I GGWCC 3 cut(s) 663, 789, 2026
Eco57I CTGAAG 2 cut(s) 104, 1228
Eco72I CACGTG 1 cut(s) 1710
Eco88I CYCGRG 1 cut(s) 1251
Eco91I GGTNACC 2 cut(s) 1535, 2177
EcoO109I RGGNCCY 1 cut(s) 1285
EcoO65I GGTNACC 2 cut(s) 1535, 2177
EcoRII CCWGG 2 cut(s) 478, 856
EcoRV GATATC 2 cut(s) 562, 2161
EcoT14I CCWWGG 1 cut(s) 2031
EcoT22I ATGCAT 1 cut(s) 1273
ErhI CCWWGG 1 cut(s) 2031
Esp3I CGTCTC 1 cut(s) 950
FalI AAGNNNNNCTT 4 cut(s) 1274, 1306, 1877, 1909
FaqI GGGAC 4 cut(s) 308, 649, 1114, 2070
FblI GTMKAC 4 cut(s) 1466, 1890, 1996, 2230
Fnu4HI GCNGC 5 cut(s) 368, 417, 632, 1390, 2371
FokI GGATG 7 cut(s) 698, 975, 1023, 1246, 1769, 2114, 2252
Fsp4HI GCNGC 5 cut(s) 368, 417, 632, 1390, 2371
FspBI CTAG 5 cut(s) 336, 848, 1335, 1620, 1988
GlaI GCGC 2 cut(s) 126, 1160
GluI GCNGC 5 cut(s) 368, 417, 632, 1390, 2371
HaeII RGCGCY 1 cut(s) 1162
HaeIII GGCC 6 cut(s) 402, 704, 1127, 1287, 1753, 2048
HapII CCGG 3 cut(s) 180, 1124, 1754
HgaI GACGC 1 cut(s) 185
HhaI GCGC 2 cut(s) 127, 1161
Hin1I GRCGYC 1 cut(s) 177
Hin6I GCGC 2 cut(s) 125, 1159
HinP1I GCGC 2 cut(s) 125, 1159
HincII GTYRAC 1 cut(s) 1966
HindII GTYRAC 1 cut(s) 1966
HindIII AAGCTT 3 cut(s) 108, 116, 714
HinfI GANTC 4 cut(s) 741, 1057, 2299, 2349
HpaII CCGG 3 cut(s) 180, 1124, 1754
HphI GGTGA 6 cut(s) 938, 980, 1529, 1583, 1855, 1975
Hpy166II GTNNAC 7 cut(s) 769, 1467, 1891, 1966, 1997, 2130, 2231
Hpy188I TCNGA 4 cut(s) 213, 802, 2143, 2366
Hpy8I GTNNAC 7 cut(s) 769, 1467, 1891, 1966, 1997, 2130, 2231
Hpy99I CGWCG 1 cut(s) 642
HpyAV CCTTC 5 cut(s) 401, 1047, 1223, 1276, 2059
HpyCH4III ACNGT 7 cut(s) 13, 149, 266, 1464, 1541, 2183, 2335
HpyCH4IV ACGT 3 cut(s) 637, 1709, 1993
HpyF3I CTNAG 7 cut(s) 1302, 1322, 1473, 2088, 2136, 2305, 2363
HpySE526I ACGT 3 cut(s) 637, 1709, 1993
Hsp92I GRCGYC 1 cut(s) 177
HspAI GCGC 2 cut(s) 125, 1159
KroI GCCGGC 1 cut(s) 179
KroNI GCCGGC 1 cut(s) 181
Kzo9I GATC 4 cut(s) 328, 814, 1087, 1132
LmnI GCTCC 3 cut(s) 366, 1220, 1354
Lsp1109I GCAGC 4 cut(s) 403, 643, 1401, 2382
LweI GCATC 9 cut(s) 951, 997, 1021, 1224, 1258, 1836, 1903, 2092, 2357
MaeI CTAG 5 cut(s) 336, 848, 1335, 1620, 1988
MaeII ACGT 3 cut(s) 637, 1709, 1993
MaeIII GTNAC 6 cut(s) 338, 379, 1261, 1535, 2177, 2192
MalI GATC 4 cut(s) 330, 816, 1089, 1134
MboI GATC 4 cut(s) 328, 814, 1087, 1132
MfeI CAATTG 2 cut(s) 822, 2060
MflI RGATCY 2 cut(s) 328, 814
MhlI GDGCHC 4 cut(s) 391, 620, 1252, 1812
MlyI GAGTC 1 cut(s) 735
MmeI TCCRAC 1 cut(s) 236
Mph1103I ATGCAT 1 cut(s) 1273
MreI CGCCGGCG 1 cut(s) 179
MroNI GCCGGC 1 cut(s) 179
MroXI GAANNNNTTC 1 cut(s) 2069
MseI TTAA 3 cut(s) 1044, 1274, 1383
MslI CAYNNNNRTG 4 cut(s) 14, 993, 1017, 1697
MspA1I CMGCKG 1 cut(s) 2405
MspI CCGG 3 cut(s) 180, 1124, 1754
MspR9I CCNGG 3 cut(s) 480, 858, 1124
MunI CAATTG 2 cut(s) 822, 2060
Mva1269I GAATGC 1 cut(s) 2212
MvaI CCWGG 2 cut(s) 480, 858
MvnI CGCG 1 cut(s) 570
NaeI GCCGGC 1 cut(s) 181
NciI CCSGG 1 cut(s) 1124
NdeII GATC 4 cut(s) 328, 814, 1087, 1132
NgoMIV GCCGGC 1 cut(s) 179
NlaIV GGNNCC 7 cut(s) 388, 477, 619, 665, 816, 1356, 2028
NmuCI GTSAC 4 cut(s) 338, 379, 1261, 1535
NruI TCGCGA 1 cut(s) 570
NsiI ATGCAT 1 cut(s) 1273
NspI RCATGY 1 cut(s) 1031
OliI CACNNNNGTG 1 cut(s) 1697
PcsI WCGNNNNNNNCGW 1 cut(s) 1715
PctI GAATGC 1 cut(s) 2212
PdiI GCCGGC 1 cut(s) 181
PdmI GAANNNNTTC 1 cut(s) 2069
PfeI GAWTC 3 cut(s) 1057, 2299, 2349
PflMI CCANNNNNTGG 2 cut(s) 1046, 1097
PfoI TCCNGGA 1 cut(s) 856
PkrI GCNGC 5 cut(s) 369, 418, 633, 1391, 2372
PleI GAGTC 1 cut(s) 735
PmaCI CACGTG 1 cut(s) 1710
PmlI CACGTG 1 cut(s) 1710
PpsI GAGTC 1 cut(s) 735
Ppu21I YACGTR 1 cut(s) 1710
PsiI TTATAA 1 cut(s) 462
Psp6I CCWGG 2 cut(s) 478, 856
PspCI CACGTG 1 cut(s) 1710
PspEI GGTNACC 2 cut(s) 1535, 2177
PspGI CCWGG 2 cut(s) 478, 856
PspN4I GGNNCC 7 cut(s) 388, 477, 619, 665, 816, 1356, 2028
PspPI GGNCC 5 cut(s) 663, 789, 1126, 1285, 2026
PstNI CAGNNNCTG 1 cut(s) 2376
PsuI RGATCY 2 cut(s) 328, 814
PvuII CAGCTG 1 cut(s) 2405
RruI TCGCGA 1 cut(s) 570
RsaI GTAC 3 cut(s) 1379, 2129, 2400
RsaNI GTAC 3 cut(s) 1378, 2128, 2399
RseI CAYNNNNRTG 4 cut(s) 14, 993, 1017, 1697
Rsr2I CGGWCCG 1 cut(s) 789
RsrII CGGWCCG 1 cut(s) 789
SaqAI TTAA 3 cut(s) 1044, 1274, 1383
SatI GCNGC 5 cut(s) 368, 417, 632, 1390, 2371
Sau3AI GATC 4 cut(s) 328, 814, 1087, 1132
Sau96I GGNCC 5 cut(s) 663, 789, 1126, 1285, 2026
SchI GAGTC 1 cut(s) 735
ScrFI CCNGG 3 cut(s) 480, 858, 1124
SduI GDGCHC 4 cut(s) 391, 620, 1252, 1812
SfaNI GCATC 9 cut(s) 951, 997, 1021, 1224, 1258, 1836, 1903, 2092, 2357
SfcI CTRYAG 2 cut(s) 262, 748
SgrAI CRCCGGYG 1 cut(s) 179
SinI GGWCC 3 cut(s) 663, 789, 2026
SmiMI CAYNNNNRTG 4 cut(s) 14, 993, 1017, 1697
SmlI CTYRAG 3 cut(s) 1169, 1516, 1638
SmoI CTYRAG 3 cut(s) 1169, 1516, 1638
SpeI ACTAGT 1 cut(s) 335
SsiI CCGC 8 cut(s) 368, 445, 543, 787, 792, 2099, 2110, 2252
SspI AATATT 1 cut(s) 433
SspMI CTAG 5 cut(s) 336, 848, 1335, 1620, 1988
StyD4I CCNGG 3 cut(s) 478, 856, 1122
StyI CCWWGG 1 cut(s) 2031
TaaI ACNGT 7 cut(s) 13, 149, 266, 1464, 1541, 2183, 2335
TaiI ACGT 3 cut(s) 640, 1712, 1996
TaqI TCGA 3 cut(s) 32, 1678, 1909
TaqII GACCGA 1 cut(s) 554
TauI GCSGC 1 cut(s) 370
TfiI GAWTC 3 cut(s) 1057, 2299, 2349
Tru1I TTAA 3 cut(s) 1044, 1274, 1383
Tru9I TTAA 3 cut(s) 1044, 1274, 1383
TscAI CASTG 9 cut(s) 154, 199, 990, 1252, 1507, 2137, 2192, 2217, 2313
TseFI GTSAC 4 cut(s) 338, 379, 1261, 1535
TseI GCWGC 4 cut(s) 416, 631, 1389, 2370
Tsp45I GTSAC 4 cut(s) 338, 379, 1261, 1535
TspDTI ATGAA 8 cut(s) 18, 383, 1007, 1089, 1419, 1446, 1481, 2331
TspRI CASTG 9 cut(s) 154, 199, 990, 1252, 1507, 2137, 2192, 2217, 2313
Van91I CCANNNNNTGG 2 cut(s) 1046, 1097
VpaK11BI GGWCC 3 cut(s) 663, 789, 2026
XapI RAATTY 7 cut(s) 575, 878, 1077, 1326, 1586, 1597, 1789
XbaI TCTAGA 1 cut(s) 1334
XceI RCATGY 1 cut(s) 1031
XcmI CCANNNNNNNNNTGG 1 cut(s) 1043
XmiI GTMKAC 4 cut(s) 1466, 1890, 1996, 2230
XmnI GAANNNNTTC 1 cut(s) 2069
XspI CTAG 5 cut(s) 336, 848, 1335, 1620, 1988
Zsp2I ATGCAT 1 cut(s) 1273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.