Rh7CG446000

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
58593963 .. 58596556
2594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG446000.1

Sequence Viewer

Length: 1737 bp
ATGATCGGGGCTTTCTTTGACAGGCGCAGTATAGACCCATGGGAGAGAAAGAAGAGAAGGGAAGAAAAGGCATTAGAGAAAGAGCTCAAAAAGGACAAAGCAAAAGCTAAAGAAGCCGTCAGAAAGCTTCAGGAACAAGCAAACTCTACAGACAGTGGAAAGAAGGGGAAGAACAATGTGAAGCGTTCAAAGTCCAACGAGGATGATGGTGATATTGATAACAATGCCAAGGACCCAGAGATTCCATACAGCGAGAAGAAACTGTTGTCTCTTCAAATGGACAAACACTACAATCCAAGTGCTGTGGAGAAGTCAAGGTGTGAGTGGTGGGAGATAAGGGGCTTGTTTATGGCAGATGCTAAAAGCTCCAAACCTCCCTTTGTGATGTTGTATCCGCCTCCGAATGTCACAGGTGTGCTTCATCTAGGCCATGCTCTCACTGCTGCTAATGGGGACACTATAATACGTTGGCGGCGGATGTCTGGCGACAACACCTTGTATCAGCCTGGAATGGACCACGCTGGGATAGCAACTCAGGTTGTTGTGGAGAAGAAGCTCATGTCCGAAACCGGGAAAACCAGGCATGATCTTGGTAGAGATGAGTTTGTGAAACAAGTTTGGGAGTGGAAAAAAGAACACGGTGGCACCATTTTGCAGCAGCTACGCCGTCTCGGTGCTTCATTGGACTTTTCGAGGGAGAGCTTTACAATGGACGAGAAATGCTCAAAGGCTGTGGTAGAAGCCTTTGTAAGGCTTTATAACAAAGGACTTATCTACAGGGATAATCGTATAGTCAACTGGGATTGCTCCCTGAAAACAGCAATATCAGAAATTGAGGTGGACTCTCTGGATATTCAAGGAAGGACGTTACTGAAGGTTCCTGGTTATGAGAACAAGGTAGAGTTCGGCCTTTTGACTACATTCGCATACCATTTGGAAGAAGAAGGAGAGGTACTTGTGGCGACTACAAGAATAGAAACCATGCTTGGTGATACTGGTATTGCTGTGCATCCGGATGACAAAAGATATAAGCATCTTCATGGAAAACATGCCATTCATCCGTTCAGTGGAAGAAGAATCCCTATAATATGTGATGCAAAGCTTGTTGATCCAGAATTTGGAACTGGTGCTGTGAAGATTACCCCGGCGCATGATCCTAATGACTTCGAAGTTGGCAAGCGCCATAATCTTGAGTTTATCAACATCTTCACTGATGATGGAGAAATAAACCAGCATGGTGGAGAAAAATTTGCAGGGATGCCACGTTTACATGAGAAGCTTTCAAAAGGAAACTTGGACAAAAAGGAAATAGAAGTAGCCAAAGAAGGGCAAAAGAAGTCATTCCCTAATGGTATCAAGGAATGTGGTGCAGATGCTCTTCGTTTTGCTCTCATTGACTACACTGCACAGTCTGAAAATATAAATCTGGACATCAAGAGGGTGGTGGGATATCGACACTGGTGCAACAAACTATGGAATGCAGTAAGGTTTGCTATTCTAACACTTGGCGACGGTTATGTTCCACCCTCAAATGCAATTAATCCAGAGGAGCTTCCATTTATTTGTCAGTGGATACTCTCAGTACTAAACAAAACAATTGATAAGACTGTGTCCTCATTGGAGTCCTATAAGTTATCTGATGCAGCTAAGGCTGTATCAAGCCTTTCCTTTCTTATAATGATCCAACAGCAGAGTTTGCGAAACACACGCTATGGTTATGTCTTGATAATGGCCTGA

Protein Analysis

578

Amino Acids

65.54

Weight (kDa)

8.64

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 107 - 286 3.6e-63 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1g PF09334 135 - 187 2e-06 tRNA synthetases class I (M)
tRNA-synt_1_2 PF13603 347 - 407 3.2e-08 Leucyl-tRNA synthetase, editing domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 759, 1676
AccB1I GGYRCC 1 cut(s) 644
AccB7I CCANNNNNTGG 1 cut(s) 1118
AccIII TCCGGA 1 cut(s) 1012
AciI CCGC 3 cut(s) 395, 472, 475
AclWI GGATC 3 cut(s) 1103, 1148, 1675
AcsI RAATTY 2 cut(s) 1115, 1247
AcuI CTGAAG 2 cut(s) 113, 893
AfaI GTAC 2 cut(s) 954, 1584
AfiI CCNNNNNNNGG 5 cut(s) 570, 750, 1067, 1118, 1326
AgsI TTSAA 4 cut(s) 189, 275, 857, 1284
AjnI CCWGG 3 cut(s) 505, 578, 880
AjuI GAANNNNNNNTTGG 2 cut(s) 969, 1001
AleI CACNNNNGTG 1 cut(s) 413
Alw21I GWGCWC 1 cut(s) 87
Alw26I GTCTC 2 cut(s) 273, 674
AlwI GGATC 3 cut(s) 1103, 1148, 1675
Aor13HI TCCGGA 1 cut(s) 1012
AoxI GGCC 3 cut(s) 427, 907, 1731
ApeKI GCWGC 4 cut(s) 443, 655, 658, 1643
ApoI RAATTY 2 cut(s) 1115, 1247
AseI ATTAAT 1 cut(s) 1539
Asp700I GAANNNNTTC 1 cut(s) 1340
AspLEI GCGC 3 cut(s) 27, 1150, 1182
AspS9I GGNCC 2 cut(s) 232, 514
AsuC2I CCSGG 2 cut(s) 571, 1145
AsuHPI GGTGA 2 cut(s) 221, 1001
AsuII TTCGAA 1 cut(s) 1167
AvaII GGWCC 2 cut(s) 232, 514
BanI GGYRCC 1 cut(s) 644
BanII GRGCYC 1 cut(s) 87
BarI GAAGNNNNNNTAC 2 cut(s) 936, 968
Bbv12I GWGCWC 1 cut(s) 87
BbvI GCAGC 4 cut(s) 430, 667, 670, 1655
BccI CCATC 2 cut(s) 200, 1211
BceAI ACGGC 2 cut(s) 101, 651
BcgI CGANNNNNNTGC 2 cut(s) 1443, 1477
BciT130I CCWGG 3 cut(s) 507, 580, 882
BciVI GTATCC 2 cut(s) 402, 1566
BcnI CCSGG 2 cut(s) 571, 1145
BcoDI GTCTC 2 cut(s) 273, 674
BfaI CTAG 1 cut(s) 425
BfmI CTRYAG 2 cut(s) 147, 775
BfoI RGCGCY 1 cut(s) 1183
BfuI GTATCC 2 cut(s) 402, 1566
BisI GCNGC 5 cut(s) 444, 473, 656, 659, 1644
BlsI GCNGC 5 cut(s) 445, 474, 657, 660, 1645
BmcAI AGTACT 1 cut(s) 1584
Bme1390I CCNGG 5 cut(s) 507, 571, 580, 882, 1145
Bme18I GGWCC 2 cut(s) 232, 514
BmgT120I GGNCC 2 cut(s) 232, 514
BmiI GGNNCC 3 cut(s) 234, 646, 879
BmrFI CCNGG 5 cut(s) 507, 571, 580, 882, 1145
BmrI ACTGGG 1 cut(s) 808
BmsI GCATC 7 cut(s) 346, 1018, 1042, 1084, 1248, 1363, 1630
BmuI ACTGGG 1 cut(s) 808
BplI GAGNNNNNCTC 4 cut(s) 707, 739, 827, 859
Bpu10I CCTNAGC 1 cut(s) 1647
Bpu14I TTCGAA 1 cut(s) 1167
BpuEI CTTGAG 1 cut(s) 1211
BpuMI CCSGG 2 cut(s) 571, 1145
BsaJI CCNNGG 3 cut(s) 38, 228, 1143
BsaWI WCCGGW 1 cut(s) 1012
Bsc4I CCNNNNNNNGG 5 cut(s) 570, 750, 1067, 1118, 1326
Bse1I ACTGG 4 cut(s) 803, 1000, 1129, 1463
BseAI TCCGGA 1 cut(s) 1012
BseBI CCWGG 3 cut(s) 507, 580, 882
BseDI CCNNGG 3 cut(s) 38, 228, 1143
BseGI GGATG 6 cut(s) 208, 483, 1009, 1021, 1057, 1263
BseLI CCNNNNNNNGG 5 cut(s) 570, 750, 1067, 1118, 1326
BseMII CTCAG 2 cut(s) 548, 1593
BseNI ACTGG 4 cut(s) 803, 1000, 1129, 1463
BseRI GAGGAG 1 cut(s) 1562
BseXI GCAGC 4 cut(s) 430, 667, 670, 1655
BseYI CCCAGC 1 cut(s) 521
BsgI GTGCAG 2 cut(s) 1389, 1389
BshFI GGCC 3 cut(s) 429, 909, 1733
BshNI GGYRCC 1 cut(s) 644
BsiHKAI GWGCWC 1 cut(s) 87
BsiSI CCGG 3 cut(s) 570, 1013, 1145
BslFI GGGAC 1 cut(s) 467
BslI CCNNNNNNNGG 5 cut(s) 570, 750, 1067, 1118, 1326
BsmAI GTCTC 2 cut(s) 273, 674
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 1 cut(s) 467
BsmI GAATGC 1 cut(s) 1483
BsnI GGCC 3 cut(s) 429, 909, 1733
Bsp119I TTCGAA 1 cut(s) 1167
Bsp1286I GDGCHC 1 cut(s) 87
Bsp13I TCCGGA 1 cut(s) 1012
Bsp143I GATC 5 cut(s) 3, 586, 1108, 1153, 1680
Bsp19I CCATGG 1 cut(s) 38
BspACI CCGC 3 cut(s) 395, 472, 475
BspANI GGCC 3 cut(s) 429, 909, 1733
BspCNI CTCAG 2 cut(s) 547, 1592
BspEI TCCGGA 1 cut(s) 1012
BspLI GGNNCC 3 cut(s) 234, 646, 879
BspPI GGATC 3 cut(s) 1103, 1148, 1675
BspQI GCTCTTC 1 cut(s) 1383
BspT104I TTCGAA 1 cut(s) 1167
BspT107I GGYRCC 1 cut(s) 644
BsrI ACTGG 4 cut(s) 803, 1000, 1129, 1463
BssECI CCNNGG 3 cut(s) 38, 228, 1143
BssMI GATC 5 cut(s) 3, 586, 1108, 1153, 1680
BssT1I CCWWGG 2 cut(s) 38, 228
Bst2UI CCWGG 3 cut(s) 507, 580, 882
Bst4CI ACNGT 6 cut(s) 155, 264, 641, 1410, 1514, 1609
Bst6I CTCTTC 3 cut(s) 47, 276, 1383
BstAPI GCANNNNNTGC 1 cut(s) 1696
BstBI TTCGAA 1 cut(s) 1167
BstC8I GCNNGC 1 cut(s) 1178
BstDEI CTNAG 3 cut(s) 534, 1579, 1647
BstDSI CCRYGG 1 cut(s) 38
BstENI CCTNNNNNAGG 1 cut(s) 748
BstF5I GGATG 6 cut(s) 208, 483, 1009, 1021, 1057, 1263
BstH2I RGCGCY 1 cut(s) 1183
BstHHI GCGC 3 cut(s) 27, 1150, 1182
BstKTI GATC 5 cut(s) 6, 589, 1111, 1156, 1683
BstMAI GTCTC 2 cut(s) 273, 674
BstMBI GATC 5 cut(s) 3, 586, 1108, 1153, 1680
BstMWI GCNNNNNNNGC 5 cut(s) 113, 440, 527, 1649, 1696
BstNI CCWGG 3 cut(s) 507, 580, 882
BstNSI RCATGY 1 cut(s) 1052
BstSCI CCNGG 5 cut(s) 505, 569, 578, 880, 1143
BstSFI CTRYAG 2 cut(s) 147, 775
BstV1I GCAGC 4 cut(s) 430, 667, 670, 1655
BstXI CCANNNNNNTGG 1 cut(s) 1238
BsuI GTATCC 2 cut(s) 402, 1566
BsuRI GGCC 3 cut(s) 429, 909, 1733
BtgI CCRYGG 1 cut(s) 38
BtsCI GGATG 6 cut(s) 208, 483, 1009, 1021, 1057, 1263
BtsI GCAGTG 2 cut(s) 438, 1401
BtsIMutI CAGTG 7 cut(s) 160, 438, 1072, 1209, 1401, 1456, 1574
Cac8I GCNNGC 1 cut(s) 1178
CfoI GCGC 3 cut(s) 27, 1150, 1182
Cfr13I GGNCC 2 cut(s) 232, 514
Csp6I GTAC 2 cut(s) 953, 1583
CspCI CAANNNNNGTGG 6 cut(s) 285, 320, 714, 749, 1345, 1380
CviQI GTAC 2 cut(s) 953, 1583
DdeI CTNAG 3 cut(s) 534, 1579, 1647
DpnI GATC 5 cut(s) 5, 588, 1110, 1155, 1682
DpnII GATC 5 cut(s) 3, 586, 1108, 1153, 1680
Eam1104I CTCTTC 3 cut(s) 47, 276, 1383
EarI CTCTTC 3 cut(s) 47, 276, 1383
EciI GGCGGA 2 cut(s) 384, 490
Ecl136II GAGCTC 1 cut(s) 85
Eco130I CCWWGG 2 cut(s) 38, 228
Eco24I GRGCYC 1 cut(s) 87
Eco32I GATATC 1 cut(s) 1451
Eco47I GGWCC 2 cut(s) 232, 514
Eco53kI GAGCTC 1 cut(s) 85
Eco57I CTGAAG 2 cut(s) 113, 893
EcoICRI GAGCTC 1 cut(s) 85
EcoNI CCTNNNNNAGG 1 cut(s) 748
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 3 cut(s) 505, 578, 880
EcoRV GATATC 1 cut(s) 1451
EcoT14I CCWWGG 2 cut(s) 38, 228
EcoT38I GRGCYC 1 cut(s) 87
ErhI CCWWGG 2 cut(s) 38, 228
Esp3I CGTCTC 1 cut(s) 674
FaqI GGGAC 1 cut(s) 467
Fnu4HI GCNGC 5 cut(s) 444, 473, 656, 659, 1644
FokI GGATG 6 cut(s) 215, 490, 996, 1028, 1044, 1270
FriOI GRGCYC 1 cut(s) 87
Fsp4HI GCNGC 5 cut(s) 444, 473, 656, 659, 1644
FspBI CTAG 1 cut(s) 425
GlaI GCGC 3 cut(s) 26, 1149, 1181
GluI GCNGC 5 cut(s) 444, 473, 656, 659, 1644
GsaI CCCAGC 1 cut(s) 525
HaeII RGCGCY 1 cut(s) 1183
HaeIII GGCC 3 cut(s) 429, 909, 1733
HapII CCGG 3 cut(s) 570, 1013, 1145
HhaI GCGC 3 cut(s) 27, 1150, 1182
Hin6I GCGC 3 cut(s) 25, 1148, 1180
HinP1I GCGC 3 cut(s) 25, 1148, 1180
HincII GTYRAC 1 cut(s) 796
HindII GTYRAC 1 cut(s) 796
HindIII AAGCTT 3 cut(s) 125, 1100, 1277
HinfI GANTC 4 cut(s) 241, 842, 1077, 1622
HpaII CCGG 3 cut(s) 570, 1013, 1145
HphI GGTGA 2 cut(s) 221, 1001
Hpy166II GTNNAC 3 cut(s) 796, 841, 1268
Hpy188I TCNGA 6 cut(s) 122, 402, 565, 829, 1414, 1639
Hpy188III TCNNGA 9 cut(s) 131, 848, 1013, 1112, 1190, 1427, 1435, 1544, 1723
Hpy8I GTNNAC 3 cut(s) 796, 841, 1268
Hpy99I CGWCG 1 cut(s) 1514
HpyAV CCTTC 6 cut(s) 51, 157, 855, 868, 938, 1319
HpyCH4III ACNGT 6 cut(s) 155, 264, 641, 1410, 1514, 1609
HpyCH4IV ACGT 3 cut(s) 466, 866, 1264
HpyF10VI GCNNNNNNNGC 5 cut(s) 113, 440, 527, 1649, 1696
HpyF3I CTNAG 3 cut(s) 534, 1579, 1647
HpySE526I ACGT 3 cut(s) 466, 866, 1264
HspAI GCGC 3 cut(s) 25, 1148, 1180
Kpn2I TCCGGA 1 cut(s) 1012
Kzo9I GATC 5 cut(s) 3, 586, 1108, 1153, 1680
LguI GCTCTTC 1 cut(s) 1383
LmnI GCTCC 3 cut(s) 371, 812, 1549
Lsp1109I GCAGC 4 cut(s) 430, 667, 670, 1655
LweI GCATC 7 cut(s) 346, 1018, 1042, 1084, 1248, 1363, 1630
MaeI CTAG 1 cut(s) 425
MaeII ACGT 3 cut(s) 466, 866, 1264
MaeIII GTNAC 2 cut(s) 406, 867
MalI GATC 5 cut(s) 5, 588, 1110, 1155, 1682
MboI GATC 5 cut(s) 3, 586, 1108, 1153, 1680
MfeI CAATTG 1 cut(s) 1596
MhlI GDGCHC 1 cut(s) 87
MluCI AATT 5 cut(s) 831, 1115, 1247, 1536, 1596
MlyI GAGTC 2 cut(s) 836, 1631
MmeI TCCRAC 2 cut(s) 219, 1708
MroI TCCGGA 1 cut(s) 1012
MroXI GAANNNNTTC 1 cut(s) 1340
MseI TTAA 1 cut(s) 1539
MslI CAYNNNNRTG 3 cut(s) 413, 1014, 1038
MspI CCGG 3 cut(s) 570, 1013, 1145
MspR9I CCNGG 5 cut(s) 507, 571, 580, 882, 1145
MunI CAATTG 1 cut(s) 1596
Mva1269I GAATGC 1 cut(s) 1483
MvaI CCWGG 3 cut(s) 507, 580, 882
MwoI GCNNNNNNNGC 5 cut(s) 113, 440, 527, 1649, 1696
NciI CCSGG 2 cut(s) 571, 1145
NcoI CCATGG 1 cut(s) 38
NdeII GATC 5 cut(s) 3, 586, 1108, 1153, 1680
NlaIV GGNNCC 3 cut(s) 234, 646, 879
NmuCI GTSAC 1 cut(s) 406
NspI RCATGY 1 cut(s) 1052
NspV TTCGAA 1 cut(s) 1167
OliI CACNNNNGTG 1 cut(s) 413
PciSI GCTCTTC 1 cut(s) 1383
PctI GAATGC 1 cut(s) 1483
PdmI GAANNNNTTC 1 cut(s) 1340
PfeI GAWTC 2 cut(s) 241, 1077
PflFI GACNNNGTC 1 cut(s) 1609
PflMI CCANNNNNTGG 1 cut(s) 1118
PkrI GCNGC 5 cut(s) 445, 474, 657, 660, 1645
PleI GAGTC 2 cut(s) 836, 1630
PpsI GAGTC 2 cut(s) 836, 1630
PpuMI RGGWCCY 1 cut(s) 232
PshBI ATTAAT 1 cut(s) 1539
PsiI TTATAA 2 cut(s) 759, 1676
Psp124BI GAGCTC 1 cut(s) 87
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 3 cut(s) 505, 578, 880
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 3 cut(s) 505, 578, 880
PspN4I GGNNCC 3 cut(s) 234, 646, 879
PspPI GGNCC 2 cut(s) 232, 514
PspPPI RGGWCCY 1 cut(s) 232
PsyI GACNNNGTC 1 cut(s) 1609
RsaI GTAC 2 cut(s) 954, 1584
RsaNI GTAC 2 cut(s) 953, 1583
RseI CAYNNNNRTG 3 cut(s) 413, 1014, 1038
SacI GAGCTC 1 cut(s) 87
SapI GCTCTTC 1 cut(s) 1383
SaqAI TTAA 1 cut(s) 1539
SatI GCNGC 5 cut(s) 444, 473, 656, 659, 1644
Sau3AI GATC 5 cut(s) 3, 586, 1108, 1153, 1680
Sau96I GGNCC 2 cut(s) 232, 514
ScaI AGTACT 1 cut(s) 1584
SchI GAGTC 2 cut(s) 836, 1631
ScrFI CCNGG 5 cut(s) 507, 571, 580, 882, 1145
SduI GDGCHC 1 cut(s) 87
SfaNI GCATC 7 cut(s) 346, 1018, 1042, 1084, 1248, 1363, 1630
SfcI CTRYAG 2 cut(s) 147, 775
SfuI TTCGAA 1 cut(s) 1167
SinI GGWCC 2 cut(s) 232, 514
SmiMI CAYNNNNRTG 3 cut(s) 413, 1014, 1038
SmlI CTYRAG 1 cut(s) 1190
SmoI CTYRAG 1 cut(s) 1190
Sse9I AATT 5 cut(s) 831, 1115, 1247, 1536, 1596
SsiI CCGC 3 cut(s) 395, 472, 475
SspMI CTAG 1 cut(s) 425
SstI GAGCTC 1 cut(s) 87
StyD4I CCNGG 5 cut(s) 505, 569, 578, 880, 1143
StyI CCWWGG 2 cut(s) 38, 228
TaaI ACNGT 6 cut(s) 155, 264, 641, 1410, 1514, 1609
TaiI ACGT 3 cut(s) 469, 869, 1267
TaqI TCGA 3 cut(s) 692, 1167, 1453
TasI AATT 5 cut(s) 831, 1115, 1247, 1536, 1596
TatI WGTACW 1 cut(s) 1582
TauI GCSGC 1 cut(s) 475
TfiI GAWTC 2 cut(s) 241, 1077
Tru1I TTAA 1 cut(s) 1539
Tru9I TTAA 1 cut(s) 1539
TscAI CASTG 7 cut(s) 160, 445, 1072, 1216, 1408, 1463, 1574
TseFI GTSAC 1 cut(s) 406
TseI GCWGC 4 cut(s) 443, 655, 658, 1643
Tsp45I GTSAC 1 cut(s) 406
TspDTI ATGAA 4 cut(s) 410, 669, 1028, 1046
TspGWI ACGGA 1 cut(s) 1050
TspRI CASTG 7 cut(s) 160, 445, 1072, 1216, 1408, 1463, 1574
Tth111I GACNNNGTC 1 cut(s) 1609
Van91I CCANNNNNTGG 1 cut(s) 1118
VpaK11BI GGWCC 2 cut(s) 232, 514
VspI ATTAAT 1 cut(s) 1539
XagI CCTNNNNNAGG 1 cut(s) 748
XapI RAATTY 2 cut(s) 1115, 1247
XceI RCATGY 1 cut(s) 1052
XmnI GAANNNNTTC 1 cut(s) 1340
XspI CTAG 1 cut(s) 425
ZrmI AGTACT 1 cut(s) 1584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.