Prupe.2G289400_v2.0.a1

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28390354 .. 28398406
8053 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G289400.1

Sequence Viewer

Length: 3279 bp
ATGCTTGGAACCCGCTTTAGGGTTTTAGCGAAGCCGCAATCCGTTTACCACCTCATCAGCAACCCGATCAAACTTGCAGCGCCAAGCCTCTTCCGTCATTTTCACATTAAGACTCCTCTTCAATCTTCTCCGGCCAACAAAGCTGAGATGGACGGTGGACATGAAGACCCAGAGAAGAAAAAGAAGAAGGAAGAAAAGGCAAGAGAGAAAGAATTGAAAAAGCAAAAAGCATTAGAGAAAGCTGCCAAGCTTCAGGCGCAGCAAGCATCCAGTTCTTCTAAGAAGAGTGAAAAGAAGAAGGTAAAGCGTTCCAATGAGGAAGAGGATAATCCAGAGGACTTCATCGACCCTGAGACTCCAATGGGCGAGAAGAAACGGATGTCTAGTCAAATGGCGAAAGGGTACAGCCCAAGTGCTGTAGAGAAGTCGTGGTATGAATGGTGGGAGAAAACGGGGTTCTTTGTGGCAGATGCTAACAGCTCCAAACCTCCATTTGTCATTGTTTTGCCGCCTCCCAATGTGACTGGTGCCCTTCATATTGGACATGCTCTTACTGCTGCTATTGAGGACACTATAATTCGTTGGCGGAGAATGTCTGGATACAATACCTTGTGGGTGCCTGGAATGGACCATGCTGGGATAGCAACGCAGGTTGTTGTAGAAAAGAAGCTAATGCGCGAAAGCCAGTTAACCAGGCATGATATTGGCCGGGAGAAATTTGTGTCTGAAGTTTGGAATTGGAAAAATAAGTATGGTGGCACCATTTTACAGCAGCTCCGCCGTCTCGGGGCTTCTTTGGATTGGTCCCGTGAGTGCTTTACAATGGATGAGAAAAGATCAAAGGCTGTGACTGAGGCTTTTGTAAGGCTTCATGAGCAAGGGCTTATCTACAGGGATAATCGCCTAGTGAATTGGGATTGTGTCTTGCGGACAGCAATATCTGAAATTGAGGTGGACTATATTGATATAAAAGAAAGGACATTTCTAAAGGTCCCTGGGTACGAGAACCCTATTGAATTTGGGGTTCTAACTTCATTTGCCTACCCTCTGGAAGAAGATTTAGGTGAGATTATTGTGGCCACAACTAGAGTGGAAACTATGCTTGGTGATACAGCTATTGCTGTACATCCTGGTGATAAAAGGTATCAGCATCTTCATGGAAAGCATGCCATTCATCCTTTTAATGGAAGAAGAATCCGTATAATATGTGATGCGATTCTCGTTGACCCAGAGTTCGGTACTGGTGCTGTAAAGATTACCCCGGCTCATGATCCGAATGATTTTGATGTTGGAAAGCGCCATAATCTTGAGTTTATCAACATCTTTACTGATGATGGAAAAATAAACCAGGATGGTGGAGAATTTGCAGGGATGCCACGTTTCAAAGCCCGAGAGGCGGTGACTGAAGCACTAAAGAAGAAGGGCCTCTTTAAAGAAGCTAAGGCCAATGAGATGCGCCTTGGAATTTGCTCTAGAAGCCAAGATGTTGTGGAGCCCATGATTAAACCCCAATGGTATGTTAAATGCACTGGTATGGGAAAAGAAGCCCTTGATGCTGCTATAGATGAAAAAAAGAAGCTTGAGATCATCCCGACACAGTATACTGCTAATTGGAAGAGATGGCTTGAGAACATTCGTGATTGGTGCGTCTCAAGGCAACTCTGGTGGGGCCACCGTGTTCCTGCATGGTATGTTGTCTGTGAGGGTGATAATCCAGACAATTTTGGTGCATCATATGAGCGGTGGGTGGTTTCAAGAAATGAGGATGAGGCCCAAGCACAGGCTAGTAAAAAATATGACGGGAAGTTTCAATTAATTCAGGATCCTGATGTGCTGGATACATGGTTTTCTTCTGGTCTCTTTCCCCTGTCTGTGTTGGGCTGGCCGGATGATACAGAAGATCTGAAGGCATTTTATCCTACTTCAGTTCTTGAAACTGGGCATGACATTCTCTTTTTCTGGGTTGCTCGCATGGTGATGCTTGGAATTACATTGGGTGGTGACGTACCTTTTACAAAGGTATATTTGCACCCAATGGTTCGTGATGCACATGGGCGTAAAATGTCAAAGTCCTTGGGGAATGTCATTGATCCACTCGAAGTAATAAATGGTGTTTCCCTTGAAGACCTACACAAGAGGCTTTTGGAGGGGAATTTGGACCCCAAGGAATTAGCTGTTGCCAAAGAAGGGCAAGTAAAGGACTTTCCTAAGGGTATTGAAGAATGTGGAGCAGATGCTCTACGTTTTGCTCTTGTCTCTTACACTGCTCAGTCTGATAAGATAAATCTGGACATCCAAAGGGTTGTGGGTTATCGTCAGTGGTGTAATAAATTGTGGAATGCAGTACGATTTGCTATGAGCAGGCTTGGAGATGATTATGTTCCGCCCAAGGATGTAAATCCAGATGTGCTTCCATTTAGTTGCCAGTGGATTCTCTCAGTACTAAATAAAGTCATATCCAAAACTGTTTTGTCACTGGAATTGTATGAGTTCTCAGATGCAGCCACTTCAGTGTATGCTTGGTGGCAGTACCAGTTGTGCGATGTTTTTATTGAAGCTATCAAGCCTTACTTCTGTGGTAACGATCCAAAGTTTGAGTCTGAAAGGGGTTTTGCACAAGCCACACTATGGTTATGTCTTGACAGTGGGCTGCGGTTGCTTCATCCATTTATGCCGTTCGTCACAGAAGAACTGTGGCAGCGCCTTCCATCACCAAGGGATCACAAGAGGCCAACATCAATTGTGATATCCGAATATCCATCCATTGTAGAGCGCTGGACAAATGAAAGGGTGGAATCAGAGATGAACCTTGTAGATTCTGTTGTGAAATCTCTCCGTTCACTTGCAAAAGAAAGTCGTGAAAGGCGGCCAGCTTTTGTGCTTTGTCGGACACCGTTAGATGGGGAAATACTATGCAGCCGTCAACTGGAGATTGAAACTCTGGCCAATCTGTCATCTTTGACGGTAATCAGTGAGAACGATGCTGCTCCAACTGGATGTGTGGTGTCTGTTGTAAATGAAAACCTTTCTGTCTATCTCAAGCTCCAAGGAAGTCGTTCCATAGAAGAAGACCTTGAAAAGATCCGGAAAAAGATGGAAGACATTACATTGCAGCAGGAGAAGCTATCTAAGGCGATGAATGTAGCTGGTTACAAAGAAAAGGTCCCTGATAAGATTCAAAAAGCCAATGCCGAAAAGCTCGACTCGCTCGAGAAGGAAAAATTGTCGCTTGAGGAAGCAAGCCAACACATGGAAGCACAGATATCTTCTGAGCAATGA

Protein Analysis

1093

Amino Acids

124.45

Weight (kDa)

6.38

Isoelectric Point (pI)

47.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 640
AccB1I GGYRCC 3 cut(s) 527, 616, 758
AccB7I CCANNNNNTGG 2 cut(s) 2628, 3250
AccBSI CCGCTC 1 cut(s) 1741
AccI GTMKAC 1 cut(s) 1601
AccII CGCG 1 cut(s) 678
AccIII TCCGGA 1 cut(s) 3084
AclWI GGATC 7 cut(s) 1265, 1817, 1830, 2084, 2579, 2727, 3076
AcoI YGGCCR 6 cut(s) 132, 706, 1077, 1883, 2867, 2943
AcsI RAATTY 5 cut(s) 716, 1016, 1361, 1464, 2152
AcuI CTGAAG 6 cut(s) 236, 747, 1425, 1908, 1925, 2493
AfaI GTAC 8 cut(s) 404, 1001, 1125, 1240, 2007, 2346, 2442, 2531
AfeI AGCGCT 1 cut(s) 2774
AjnI CCWGG 5 cut(s) 619, 692, 994, 1129, 1347
AjuI GAANNNNNNNTTGG 2 cut(s) 1086, 1118
AleI CACNNNNGTG 1 cut(s) 2510
Alw26I GTCTC 5 cut(s) 347, 788, 1654, 1862, 2260
AlwI GGATC 7 cut(s) 1265, 1817, 1830, 2084, 2579, 2727, 3076
Ama87I CYCGRG 3 cut(s) 785, 1389, 3209
Aor13HI TCCGGA 1 cut(s) 3084
Aor51HI AGCGCT 1 cut(s) 2774
ApoI RAATTY 5 cut(s) 716, 1016, 1361, 1464, 2152
ArsI GACNNNNNNTTYG 6 cut(s) 1217, 1249, 2582, 2614, 3147, 3179
AseI ATTAAT 1 cut(s) 1814
Asp700I GAANNNNTTC 1 cut(s) 3055
AspLEI GCGC 7 cut(s) 82, 259, 678, 1299, 1458, 2703, 2775
AspS9I GGNCC 8 cut(s) 628, 804, 991, 1423, 1669, 1771, 2158, 3163
AsuC2I CCSGG 2 cut(s) 710, 1262
AsuHPI GGTGA 8 cut(s) 1076, 1118, 1145, 1411, 1718, 1987, 2012, 2703
AvaI CYCGRG 3 cut(s) 785, 1389, 3209
AvaII GGWCC 5 cut(s) 628, 804, 991, 2158, 3163
AxyI CCTNAGG 1 cut(s) 2208
BaeGI GKGCMC 1 cut(s) 532
BalI TGGCCA 2 cut(s) 1079, 2945
BamHI GGATCC 1 cut(s) 1822
BanI GGYRCC 3 cut(s) 527, 616, 758
BanII GRGCYC 1 cut(s) 1497
BbsI GAAGAC 4 cut(s) 171, 2130, 3075, 3105
BccI CCATC 8 cut(s) 142, 1328, 1346, 1614, 2716, 2767, 2894, 3088
BceAI ACGGC 3 cut(s) 765, 2659, 2904
BciT130I CCWGG 5 cut(s) 621, 694, 996, 1131, 1349
BciVI GTATCC 2 cut(s) 593, 1831
BcnI CCSGG 2 cut(s) 710, 1262
BcoDI GTCTC 5 cut(s) 347, 788, 1654, 1862, 2260
BfaI CTAG 5 cut(s) 384, 905, 1086, 1473, 1785
BfmI CTRYAG 3 cut(s) 417, 889, 1560
BfoI RGCGCY 4 cut(s) 83, 1300, 2704, 2776
BfuAI ACCTGC 1 cut(s) 640
BfuI GTATCC 2 cut(s) 593, 1831
BglI GCCNNNNNGGC 1 cut(s) 1394
BglII AGATCT 1 cut(s) 1900
BmcAI AGTACT 1 cut(s) 2442
Bme1390I CCNGG 7 cut(s) 621, 694, 710, 996, 1131, 1262, 1349
Bme18I GGWCC 5 cut(s) 628, 804, 991, 2158, 3163
BmeT110I CYCGRG 3 cut(s) 785, 1389, 3209
BmgT120I GGNCC 8 cut(s) 628, 804, 991, 1423, 1669, 1771, 2158, 3163
BmrFI CCNGG 7 cut(s) 621, 694, 710, 996, 1131, 1262, 1349
BmrI ACTGGG 1 cut(s) 1947
BmuI ACTGGG 1 cut(s) 1947
BpiI GAAGAC 4 cut(s) 171, 2130, 3075, 3105
BpmI CTGGAG 1 cut(s) 2948
Bpu10I CCTNAGC 1 cut(s) 1440
BpuEI CTTGAG 6 cut(s) 1328, 1601, 1636, 1646, 3023, 3251
BpuMI CCSGG 2 cut(s) 710, 1262
BsaBI GATNNNNATC 1 cut(s) 2397
BsaI GGTCTC 1 cut(s) 1862
BsaJI CCNNGG 9 cut(s) 994, 995, 1260, 1459, 2073, 2163, 2388, 2714, 3046
BsaWI WCCGGW 1 cut(s) 3084
BsaXI ACNNNNNCTCC 2 cut(s) 759, 789
Bse21I CCTNAGG 1 cut(s) 2208
Bse3DI GCAATG 1 cut(s) 3107
Bse8I GATNNNNATC 1 cut(s) 2397
BseAI TCCGGA 1 cut(s) 3084
BseBI CCWGG 5 cut(s) 621, 694, 996, 1131, 1349
BseDI CCNNGG 9 cut(s) 994, 995, 1260, 1459, 2073, 2163, 2388, 2714, 3046
BseJI GATNNNNATC 1 cut(s) 2397
BseMI GCAATG 1 cut(s) 3107
BseMII CTCAG 7 cut(s) 135, 342, 843, 2282, 2451, 2508, 3261
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 1 cut(s) 532
BseYI CCCAGC 1 cut(s) 635
Bsh1236I CGCG 1 cut(s) 678
BshNI GGYRCC 3 cut(s) 527, 616, 758
BsiHKCI CYCGRG 3 cut(s) 785, 1389, 3209
BsiSI CCGG 5 cut(s) 131, 709, 1262, 1886, 3085
BslFI GGGAC 3 cut(s) 790, 977, 3149
BsmAI GTCTC 5 cut(s) 347, 788, 1654, 1862, 2260
BsmBI CGTCTC 2 cut(s) 788, 1654
BsmFI GGGAC 3 cut(s) 790, 977, 3149
BsmI GAATGC 1 cut(s) 2344
Bso31I GGTCTC 1 cut(s) 1862
BsoBI CYCGRG 3 cut(s) 785, 1389, 3209
Bsp1286I GDGCHC 2 cut(s) 532, 1497
Bsp13I TCCGGA 1 cut(s) 3084
Bsp1407I TGTACA 1 cut(s) 1123
BspCNI CTCAG 7 cut(s) 136, 343, 844, 2281, 2450, 2507, 3262
BspEI TCCGGA 1 cut(s) 3084
BspFNI CGCG 1 cut(s) 678
BspHI TCATGA 2 cut(s) 871, 1267
BspMI ACCTGC 1 cut(s) 640
BspPI GGATC 7 cut(s) 1265, 1817, 1830, 2084, 2579, 2727, 3076
BspT107I GGYRCC 3 cut(s) 527, 616, 758
BspTNI GGTCTC 1 cut(s) 1862
BsrBI CCGCTC 1 cut(s) 1741
BsrDI GCAATG 1 cut(s) 3107
BsrGI TGTACA 1 cut(s) 1123
BssECI CCNNGG 9 cut(s) 994, 995, 1260, 1459, 2073, 2163, 2388, 2714, 3046
BssNAI GTATAC 1 cut(s) 1602
BssT1I CCWWGG 6 cut(s) 1459, 2073, 2163, 2388, 2714, 3046
Bst1107I GTATAC 1 cut(s) 1602
Bst2UI CCWGG 5 cut(s) 621, 694, 996, 1131, 1349
Bst4CI ACNGT 8 cut(s) 155, 1599, 1676, 2467, 2645, 2694, 2895, 2965
Bst6I CTCTTC 5 cut(s) 95, 123, 278, 315, 1610
BstAUI TGTACA 1 cut(s) 1123
BstC8I GCNNGC 7 cut(s) 264, 1167, 1883, 1969, 2363, 2871, 3241
BstFNI CGCG 1 cut(s) 678
BstH2I RGCGCY 4 cut(s) 83, 1300, 2704, 2776
BstHHI GCGC 7 cut(s) 82, 259, 678, 1299, 1458, 2703, 2775
BstMAI GTCTC 5 cut(s) 347, 788, 1654, 1862, 2260
BstNI CCWGG 5 cut(s) 621, 694, 996, 1131, 1349
BstNSI RCATGY 2 cut(s) 548, 1169
BstSCI CCNGG 7 cut(s) 619, 692, 708, 994, 1129, 1260, 1347
BstSFI CTRYAG 3 cut(s) 417, 889, 1560
BstSLI GKGCMC 1 cut(s) 532
BstUI CGCG 1 cut(s) 678
BstV2I GAAGAC 4 cut(s) 171, 2130, 3075, 3105
BstX2I RGATCY 3 cut(s) 1822, 1900, 3081
BstXI CCANNNNNNTGG 1 cut(s) 1355
BstYI RGATCY 3 cut(s) 1822, 1900, 3081
BstZ17I GTATAC 1 cut(s) 1602
Bsu36I CCTNAGG 1 cut(s) 2208
BsuI GTATCC 2 cut(s) 593, 1831
BtgZI GCGATG 2 cut(s) 2556, 3149
BtsI GCAGTG 1 cut(s) 2262
BtsIMutI CAGTG 8 cut(s) 1527, 2262, 2324, 2432, 2474, 2517, 2650, 2977
BveI ACCTGC 1 cut(s) 640
Cac8I GCNNGC 7 cut(s) 264, 1167, 1883, 1969, 2363, 2871, 3241
CciI TCATGA 2 cut(s) 871, 1267
CfoI GCGC 7 cut(s) 82, 259, 678, 1299, 1458, 2703, 2775
Cfr13I GGNCC 8 cut(s) 628, 804, 991, 1423, 1669, 1771, 2158, 3163
CseI GACGC 1 cut(s) 1636
Csp6I GTAC 8 cut(s) 403, 1000, 1124, 1239, 2006, 2345, 2441, 2530
CspCI CAANNNNNGTGG 4 cut(s) 1071, 1106, 1646, 1681
CviQI GTAC 8 cut(s) 403, 1000, 1124, 1239, 2006, 2345, 2441, 2530
DraI TTTAAA 1 cut(s) 1432
EaeI YGGCCR 6 cut(s) 132, 706, 1077, 1883, 2867, 2943
Eam1104I CTCTTC 5 cut(s) 95, 123, 278, 315, 1610
EarI CTCTTC 5 cut(s) 95, 123, 278, 315, 1610
EciI GGCGGA 3 cut(s) 601, 767, 2373
Eco130I CCWWGG 6 cut(s) 1459, 2073, 2163, 2388, 2714, 3046
Eco24I GRGCYC 1 cut(s) 1497
Eco31I GGTCTC 1 cut(s) 1862
Eco32I GATATC 2 cut(s) 2748, 3264
Eco47I GGWCC 5 cut(s) 628, 804, 991, 2158, 3163
Eco47III AGCGCT 1 cut(s) 2774
Eco57I CTGAAG 6 cut(s) 236, 747, 1425, 1908, 1925, 2493
Eco81I CCTNAGG 1 cut(s) 2208
Eco88I CYCGRG 3 cut(s) 785, 1389, 3209
EcoO109I RGGNCCY 3 cut(s) 991, 1423, 3163
EcoRII CCWGG 5 cut(s) 619, 692, 994, 1129, 1347
EcoRV GATATC 2 cut(s) 2748, 3264
EcoT14I CCWWGG 6 cut(s) 1459, 2073, 2163, 2388, 2714, 3046
EcoT38I GRGCYC 1 cut(s) 1497
ErhI CCWWGG 6 cut(s) 1459, 2073, 2163, 2388, 2714, 3046
Esp3I CGTCTC 2 cut(s) 788, 1654
FalI AAGNNNNNCTT 8 cut(s) 1412, 1444, 1533, 1565, 2555, 2587, 3057, 3089
FaqI GGGAC 3 cut(s) 790, 977, 3149
FauI CCCGC 1 cut(s) 20
FauNDI CATATG 1 cut(s) 1735
FblI GTMKAC 1 cut(s) 1601
FriOI GRGCYC 1 cut(s) 1497
FspBI CTAG 5 cut(s) 384, 905, 1086, 1473, 1785
GlaI GCGC 7 cut(s) 81, 258, 677, 1298, 1457, 2702, 2774
GsaI CCCAGC 1 cut(s) 639
GsuI CTGGAG 1 cut(s) 2948
HaeII RGCGCY 4 cut(s) 83, 1300, 2704, 2776
HapII CCGG 5 cut(s) 131, 709, 1262, 1886, 3085
HgaI GACGC 1 cut(s) 1636
HhaI GCGC 7 cut(s) 82, 259, 678, 1299, 1458, 2703, 2775
Hin6I GCGC 7 cut(s) 80, 257, 676, 1297, 1456, 2701, 2773
HinP1I GCGC 7 cut(s) 80, 257, 676, 1297, 1456, 2701, 2773
HincII GTYRAC 3 cut(s) 690, 1225, 2924
HindII GTYRAC 3 cut(s) 690, 1225, 2924
HindIII AAGCTT 2 cut(s) 248, 1577
HpaI GTTAAC 1 cut(s) 690
HpaII CCGG 5 cut(s) 131, 709, 1262, 1886, 3085
HphI GGTGA 8 cut(s) 1076, 1118, 1145, 1411, 1718, 1987, 2012, 2703
Hpy166II GTNNAC 8 cut(s) 46, 158, 690, 955, 1225, 1602, 2840, 2924
Hpy8I GTNNAC 8 cut(s) 46, 158, 690, 955, 1225, 1602, 2840, 2924
HpyAV CCTTC 8 cut(s) 181, 292, 542, 1414, 1900, 2180, 2714, 3208
HpyCH4III ACNGT 8 cut(s) 155, 1599, 1676, 2467, 2645, 2694, 2895, 2965
HpyCH4IV ACGT 3 cut(s) 1378, 2004, 2242
HpySE526I ACGT 3 cut(s) 1378, 2004, 2242
HspAI GCGC 7 cut(s) 80, 257, 676, 1297, 1456, 2701, 2773
Kpn2I TCCGGA 1 cut(s) 3084
KspAI GTTAAC 1 cut(s) 690
LmnI GCTCC 6 cut(s) 485, 780, 1492, 2228, 2992, 3048
MaeI CTAG 5 cut(s) 384, 905, 1086, 1473, 1785
MaeII ACGT 3 cut(s) 1378, 2004, 2242
MaeIII GTNAC 8 cut(s) 520, 847, 1399, 2000, 2472, 2579, 2680, 3149
MbiI CCGCTC 1 cut(s) 1741
MfeI CAATTG 1 cut(s) 2739
MflI RGATCY 3 cut(s) 1822, 1900, 3081
MhlI GDGCHC 2 cut(s) 532, 1497
MlsI TGGCCA 2 cut(s) 1079, 2945
MluNI TGGCCA 2 cut(s) 1079, 2945
MlyI GAGTC 4 cut(s) 106, 349, 2606, 3197
MmeI TCCRAC 3 cut(s) 1270, 2867, 3014
Mox20I TGGCCA 2 cut(s) 1079, 2945
MroI TCCGGA 1 cut(s) 3084
MroXI GAANNNNTTC 1 cut(s) 3055
MscI TGGCCA 2 cut(s) 1079, 2945
MseI TTAA 7 cut(s) 108, 689, 1182, 1431, 1503, 1521, 1814
MslI CAYNNNNRTG 5 cut(s) 1131, 1155, 1532, 1976, 2510
Msp20I TGGCCA 2 cut(s) 1079, 2945
MspI CCGG 5 cut(s) 131, 709, 1262, 1886, 3085
MspR9I CCNGG 7 cut(s) 621, 694, 710, 996, 1131, 1262, 1349
MunI CAATTG 1 cut(s) 2739
Mva1269I GAATGC 1 cut(s) 2344
MvaI CCWGG 5 cut(s) 621, 694, 996, 1131, 1349
MvnI CGCG 1 cut(s) 678
NciI CCSGG 2 cut(s) 710, 1262
NdeI CATATG 1 cut(s) 1735
NmuCI GTSAC 6 cut(s) 520, 847, 1399, 2000, 2472, 2680
NspI RCATGY 2 cut(s) 548, 1169
OliI CACNNNNGTG 1 cut(s) 2510
PaeI GCATGC 1 cut(s) 1169
PaeR7I CTCGAG 1 cut(s) 3209
PagI TCATGA 2 cut(s) 871, 1267
PasI CCCWGGG 1 cut(s) 995
PcsI WCGNNNNNNNCGW 1 cut(s) 3207
PctI GAATGC 1 cut(s) 2344
PdmI GAANNNNTTC 1 cut(s) 3055
PfeI GAWTC 6 cut(s) 1194, 1216, 2431, 2795, 2816, 3175
PflMI CCANNNNNTGG 2 cut(s) 2628, 3250
PleI GAGTC 4 cut(s) 106, 349, 2605, 3197
PpsI GAGTC 4 cut(s) 106, 349, 2605, 3197
PpuMI RGGWCCY 2 cut(s) 991, 3163
PshBI ATTAAT 1 cut(s) 1814
Psp5II RGGWCCY 2 cut(s) 991, 3163
Psp6I CCWGG 5 cut(s) 619, 692, 994, 1129, 1347
PspFI CCCAGC 1 cut(s) 635
PspGI CCWGG 5 cut(s) 619, 692, 994, 1129, 1347
PspPI GGNCC 8 cut(s) 628, 804, 991, 1423, 1669, 1771, 2158, 3163
PspPPI RGGWCCY 2 cut(s) 991, 3163
PsuI RGATCY 3 cut(s) 1822, 1900, 3081
RsaI GTAC 8 cut(s) 404, 1001, 1125, 1240, 2007, 2346, 2442, 2531
RsaNI GTAC 8 cut(s) 403, 1000, 1124, 1239, 2006, 2345, 2441, 2530
RseI CAYNNNNRTG 5 cut(s) 1131, 1155, 1532, 1976, 2510
SaqAI TTAA 7 cut(s) 108, 689, 1182, 1431, 1503, 1521, 1814
Sau96I GGNCC 8 cut(s) 628, 804, 991, 1423, 1669, 1771, 2158, 3163
ScaI AGTACT 1 cut(s) 2442
SchI GAGTC 4 cut(s) 106, 349, 2606, 3197
ScrFI CCNGG 7 cut(s) 621, 694, 710, 996, 1131, 1262, 1349
SduI GDGCHC 2 cut(s) 532, 1497
SfcI CTRYAG 3 cut(s) 417, 889, 1560
Sfr274I CTCGAG 1 cut(s) 3209
SinI GGWCC 5 cut(s) 628, 804, 991, 2158, 3163
SlaI CTCGAG 1 cut(s) 3209
SmiMI CAYNNNNRTG 5 cut(s) 1131, 1155, 1532, 1976, 2510
SmlI CTYRAG 7 cut(s) 1307, 1580, 1625, 1651, 3038, 3209, 3230
SmoI CTYRAG 7 cut(s) 1307, 1580, 1625, 1651, 3038, 3209, 3230
SphI GCATGC 1 cut(s) 1169
SspMI CTAG 5 cut(s) 384, 905, 1086, 1473, 1785
StyD4I CCNGG 7 cut(s) 619, 692, 708, 994, 1129, 1260, 1347
StyI CCWWGG 6 cut(s) 1459, 2073, 2163, 2388, 2714, 3046
TaaI ACNGT 8 cut(s) 155, 1599, 1676, 2467, 2645, 2694, 2895, 2965
TaiI ACGT 3 cut(s) 1381, 2007, 2245
TaqI TCGA 4 cut(s) 345, 2097, 3201, 3210
TatI WGTACW 2 cut(s) 1123, 2440
TauI GCSGC 3 cut(s) 37, 511, 2869
TfiI GAWTC 6 cut(s) 1194, 1216, 2431, 2795, 2816, 3175
Tru1I TTAA 7 cut(s) 108, 689, 1182, 1431, 1503, 1521, 1814
Tru9I TTAA 7 cut(s) 108, 689, 1182, 1431, 1503, 1521, 1814
TscAI CASTG 8 cut(s) 1534, 2269, 2324, 2432, 2481, 2517, 2650, 2977
TseFI GTSAC 6 cut(s) 520, 847, 1399, 2000, 2472, 2680
Tsp45I GTSAC 6 cut(s) 520, 847, 1399, 2000, 2472, 2680
TspGWI ACGGA 5 cut(s) 31, 83, 391, 1187, 2825
TspRI CASTG 8 cut(s) 1534, 2269, 2324, 2432, 2481, 2517, 2650, 2977
Van91I CCANNNNNTGG 2 cut(s) 2628, 3250
VpaK11BI GGWCC 5 cut(s) 628, 804, 991, 2158, 3163
VspI ATTAAT 1 cut(s) 1814
XapI RAATTY 5 cut(s) 716, 1016, 1361, 1464, 2152
XbaI TCTAGA 1 cut(s) 1472
XceI RCATGY 2 cut(s) 548, 1169
XcmI CCANNNNNNNNNTGG 1 cut(s) 1087
XhoI CTCGAG 1 cut(s) 3209
XmiI GTMKAC 1 cut(s) 1601
XmnI GAANNNNTTC 1 cut(s) 3055
XspI CTAG 5 cut(s) 384, 905, 1086, 1473, 1785
ZrmI AGTACT 1 cut(s) 2442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.