Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1 | PF00133 | 103 - 725 | 8.7e-141 | tRNA synthetases class I (I, L, M and V) |
| tRNA-synt_1g | PF09334 | 132 - 182 | 3.5e-06 | tRNA synthetases class I (M) |
| tRNA-synt_1_2 | PF13603 | 346 - 405 | 4.1e-07 | Leucyl-tRNA synthetase, editing domain |
| Anticodon_1 | PF08264 | 771 - 910 | 8.3e-31 | Anticodon-binding domain of tRNA ligase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 480 |
| AccB1I | GGYRCC | 2 cut(s) | 404, 635 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1064, 1115 |
| AccI | GTMKAC | 4 cut(s) | 1484, 1908, 2014, 2248 |
| AccII | CGCG | 2 cut(s) | 588, 2793 |
| AccIII | TCCGGA | 1 cut(s) | 2979 |
| AciI | CCGC | 9 cut(s) | 386, 463, 561, 805, 810, 2117, 2128, 2270, 2897 |
| AclWI | GGATC | 7 cut(s) | 827, 840, 1100, 1145, 1246, 2465, 2971 |
| AcoI | YGGCCR | 2 cut(s) | 1665, 1769 |
| AcsI | RAATTY | 6 cut(s) | 593, 896, 1095, 1344, 1604, 1807 |
| AcuI | CTGAAG | 3 cut(s) | 134, 1246, 2940 |
| AcvI | CACGTG | 1 cut(s) | 1728 |
| AcyI | GRCGYC | 1 cut(s) | 207 |
| AdeI | CACNNNGTG | 1 cut(s) | 2514 |
| AfaI | GTAC | 5 cut(s) | 49, 311, 1397, 2417, 2642 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1064, 1115, 1234, 2111, 2600, 3070, 3112 |
| AflIII | ACRYGT | 2 cut(s) | 312, 1725 |
| AhlI | ACTAGT | 1 cut(s) | 77 |
| AjnI | CCWGG | 6 cut(s) | 17, 496, 874, 2599, 2733, 2796 |
| Alw21I | GWGCWC | 1 cut(s) | 2769 |
| Alw26I | GTCTC | 7 cut(s) | 968, 1537, 2435, 2697, 2721, 2746, 3129 |
| AlwI | GGATC | 7 cut(s) | 827, 840, 1100, 1145, 1246, 2465, 2971 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2393 |
| Ama87I | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| Aor13HI | TCCGGA | 1 cut(s) | 2979 |
| AoxI | GGCC | 7 cut(s) | 40, 418, 1303, 1665, 1769, 2064, 2533 |
| ApeKI | GCWGC | 6 cut(s) | 434, 649, 1407, 2387, 2879, 3044 |
| ApoI | RAATTY | 6 cut(s) | 593, 896, 1095, 1344, 1604, 1807 |
| AspLEI | GCGC | 2 cut(s) | 1179, 2793 |
| AspS9I | GGNCC | 6 cut(s) | 40, 681, 807, 1303, 2044, 3061 |
| AsuC2I | CCSGG | 1 cut(s) | 1142 |
| AsuHPI | GGTGA | 7 cut(s) | 19, 956, 998, 1547, 1601, 1873, 1993 |
| AvaI | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| AvaII | GGWCC | 4 cut(s) | 681, 807, 2044, 3061 |
| AxyI | CCTNAGG | 1 cut(s) | 2537 |
| BaeGI | GKGCMC | 3 cut(s) | 409, 638, 1830 |
| BamHI | GGATCC | 1 cut(s) | 832 |
| BanI | GGYRCC | 2 cut(s) | 404, 635 |
| BanII | GRGCYC | 1 cut(s) | 1270 |
| BbrPI | CACGTG | 1 cut(s) | 1728 |
| BbsI | GAAGAC | 2 cut(s) | 252, 2425 |
| Bbv12I | GWGCWC | 1 cut(s) | 2769 |
| BbvI | GCAGC | 6 cut(s) | 421, 661, 1419, 2399, 2866, 3031 |
| BccI | CCATC | 7 cut(s) | 295, 1062, 1208, 1497, 1620, 2090, 2307 |
| BceAI | ACGGC | 2 cut(s) | 27, 2578 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 638, 672 |
| BciT130I | CCWGG | 6 cut(s) | 19, 498, 876, 2601, 2735, 2798 |
| BclI | TGATCA | 1 cut(s) | 2649 |
| BcnI | CCSGG | 1 cut(s) | 1142 |
| BcoDI | GTCTC | 7 cut(s) | 968, 1537, 2435, 2697, 2721, 2746, 3129 |
| BcuI | ACTAGT | 1 cut(s) | 77 |
| BfaI | CTAG | 5 cut(s) | 78, 1353, 1638, 2006, 2889 |
| BfmI | CTRYAG | 3 cut(s) | 280, 766, 2770 |
| BfoI | RGCGCY | 1 cut(s) | 1180 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1274 |
| BglII | AGATCT | 1 cut(s) | 2965 |
| BisI | GCNGC | 7 cut(s) | 386, 435, 650, 1408, 2388, 2880, 3045 |
| BlsI | GCNGC | 7 cut(s) | 387, 436, 651, 1409, 2389, 2881, 3046 |
| Bme1390I | CCNGG | 7 cut(s) | 19, 498, 876, 1142, 2601, 2735, 2798 |
| Bme18I | GGWCC | 4 cut(s) | 681, 807, 2044, 3061 |
| BmeT110I | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| BmgT120I | GGNCC | 6 cut(s) | 40, 681, 807, 1303, 2044, 3061 |
| BmiI | GGNNCC | 7 cut(s) | 406, 637, 683, 834, 1374, 2046, 3063 |
| BmrFI | CCNGG | 7 cut(s) | 19, 498, 876, 1142, 2601, 2735, 2798 |
| BmrI | ACTGGG | 4 cut(s) | 230, 799, 1384, 1833 |
| BmuI | ACTGGG | 4 cut(s) | 230, 799, 1384, 1833 |
| BoxI | GACNNNNGTC | 1 cut(s) | 236 |
| BpiI | GAAGAC | 2 cut(s) | 252, 2425 |
| BpmI | CTGGAG | 1 cut(s) | 1484 |
| BpuEI | CTTGAG | 4 cut(s) | 1208, 1641, 2918, 3128 |
| BpuMI | CCSGG | 1 cut(s) | 1142 |
| Bsa29I | ATCGAT | 1 cut(s) | 2865 |
| BsaAI | YACGTR | 2 cut(s) | 313, 1728 |
| BsaHI | GRCGYC | 1 cut(s) | 207 |
| BsaJI | CCNNGG | 5 cut(s) | 1140, 2049, 2600, 2733, 2734 |
| BsaWI | WCCGGW | 1 cut(s) | 2979 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2743, 2773 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1064, 1115, 1234, 2111, 2600, 3070, 3112 |
| Bse118I | RCCGGY | 1 cut(s) | 209 |
| Bse21I | CCTNAGG | 1 cut(s) | 2537 |
| Bse3DI | GCAATG | 2 cut(s) | 1972, 2473 |
| BseAI | TCCGGA | 1 cut(s) | 2979 |
| BseBI | CCWGG | 6 cut(s) | 19, 498, 876, 2601, 2735, 2798 |
| BseCI | ATCGAT | 1 cut(s) | 2865 |
| BseDI | CCNNGG | 5 cut(s) | 1140, 2049, 2600, 2733, 2734 |
| BseGI | GGATG | 8 cut(s) | 709, 1006, 1054, 1257, 1780, 2125, 2263, 2548 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1064, 1115, 1234, 2111, 2600, 3070, 3112 |
| BseMI | GCAATG | 2 cut(s) | 1972, 2473 |
| BseMII | CTCAG | 7 cut(s) | 1482, 1725, 2097, 2168, 2337, 2394, 2528 |
| BseSI | GKGCMC | 3 cut(s) | 409, 638, 1830 |
| BseXI | GCAGC | 6 cut(s) | 421, 661, 1419, 2399, 2866, 3031 |
| Bsh1236I | CGCG | 2 cut(s) | 588, 2793 |
| Bsh1285I | CGRYCG | 1 cut(s) | 586 |
| BshFI | GGCC | 7 cut(s) | 42, 420, 1305, 1667, 1771, 2066, 2535 |
| BshNI | GGYRCC | 2 cut(s) | 404, 635 |
| BshVI | ATCGAT | 1 cut(s) | 2865 |
| BsiEI | CGRYCG | 1 cut(s) | 586 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2769 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| BsiSI | CCGG | 4 cut(s) | 210, 1142, 1772, 2980 |
| BslFI | GGGAC | 5 cut(s) | 667, 1132, 2088, 2519, 3047 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1064, 1115, 1234, 2111, 2600, 3070, 3112 |
| BsmAI | GTCTC | 7 cut(s) | 968, 1537, 2435, 2697, 2721, 2746, 3129 |
| BsmBI | CGTCTC | 1 cut(s) | 968 |
| BsmFI | GGGAC | 5 cut(s) | 667, 1132, 2088, 2519, 3047 |
| BsmI | GAATGC | 1 cut(s) | 2230 |
| BsnI | GGCC | 7 cut(s) | 42, 420, 1305, 1667, 1771, 2066, 2535 |
| BsoBI | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| Bsp1286I | GDGCHC | 5 cut(s) | 409, 638, 1270, 1830, 2769 |
| Bsp13I | TCCGGA | 1 cut(s) | 2979 |
| Bsp68I | TCGCGA | 1 cut(s) | 588 |
| BspACI | CCGC | 9 cut(s) | 386, 463, 561, 805, 810, 2117, 2128, 2270, 2897 |
| BspANI | GGCC | 7 cut(s) | 42, 420, 1305, 1667, 1771, 2066, 2535 |
| BspCNI | CTCAG | 7 cut(s) | 1483, 1724, 2098, 2167, 2336, 2393, 2529 |
| BspDI | ATCGAT | 1 cut(s) | 2865 |
| BspEI | TCCGGA | 1 cut(s) | 2979 |
| BspFNI | CGCG | 2 cut(s) | 588, 2793 |
| BspHI | TCATGA | 1 cut(s) | 1147 |
| BspLI | GGNNCC | 7 cut(s) | 406, 637, 683, 834, 1374, 2046, 3063 |
| BspPI | GGATC | 7 cut(s) | 827, 840, 1100, 1145, 1246, 2465, 2971 |
| BspT107I | GGYRCC | 2 cut(s) | 404, 635 |
| BsrDI | GCAATG | 2 cut(s) | 1972, 2473 |
| BsrFI | RCCGGY | 1 cut(s) | 209 |
| BssAI | RCCGGY | 1 cut(s) | 209 |
| BssECI | CCNNGG | 5 cut(s) | 1140, 2049, 2600, 2733, 2734 |
| BssNAI | GTATAC | 3 cut(s) | 1485, 1909, 2249 |
| BssNI | GRCGYC | 1 cut(s) | 207 |
| BssT1I | CCWWGG | 1 cut(s) | 2049 |
| Bst1107I | GTATAC | 3 cut(s) | 1485, 1909, 2249 |
| Bst2UI | CCWGG | 6 cut(s) | 19, 498, 876, 2601, 2735, 2798 |
| Bst4CI | ACNGT | 9 cut(s) | 25, 179, 284, 1482, 1559, 2201, 2353, 2580, 2860 |
| Bst6I | CTCTTC | 4 cut(s) | 1313, 1493, 1644, 3126 |
| BstACI | GRCGYC | 1 cut(s) | 207 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2393, 2590 |
| BstBAI | YACGTR | 2 cut(s) | 313, 1728 |
| BstC8I | GCNNGC | 5 cut(s) | 211, 514, 1769, 2838, 3042 |
| BstDEI | CTNAG | 9 cut(s) | 12, 1340, 1491, 1711, 2106, 2154, 2323, 2380, 2537 |
| BstEII | GGTNACC | 2 cut(s) | 1553, 2195 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3110 |
| BstF5I | GGATG | 8 cut(s) | 709, 1006, 1054, 1257, 1780, 2125, 2263, 2548 |
| BstFNI | CGCG | 2 cut(s) | 588, 2793 |
| BstH2I | RGCGCY | 1 cut(s) | 1180 |
| BstHHI | GCGC | 2 cut(s) | 1179, 2793 |
| BstMAI | GTCTC | 7 cut(s) | 968, 1537, 2435, 2697, 2721, 2746, 3129 |
| BstMCI | CGRYCG | 1 cut(s) | 586 |
| BstNI | CCWGG | 6 cut(s) | 19, 498, 876, 2601, 2735, 2798 |
| BstNSI | RCATGY | 1 cut(s) | 1049 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 236 |
| BstPI | GGTNACC | 2 cut(s) | 1553, 2195 |
| BstSCI | CCNGG | 7 cut(s) | 17, 496, 874, 1140, 2599, 2733, 2796 |
| BstSFI | CTRYAG | 3 cut(s) | 280, 766, 2770 |
| BstSLI | GKGCMC | 3 cut(s) | 409, 638, 1830 |
| BstUI | CGCG | 2 cut(s) | 588, 2793 |
| BstV1I | GCAGC | 6 cut(s) | 421, 661, 1419, 2399, 2866, 3031 |
| BstV2I | GAAGAC | 2 cut(s) | 252, 2425 |
| BstX2I | RGATCY | 3 cut(s) | 832, 2965, 2976 |
| BstYI | RGATCY | 3 cut(s) | 832, 2965, 2976 |
| BstZ17I | GTATAC | 3 cut(s) | 1485, 1909, 2249 |
| Bsu15I | ATCGAT | 1 cut(s) | 2865 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2537 |
| BsuRI | GGCC | 7 cut(s) | 42, 420, 1305, 1667, 1771, 2066, 2535 |
| BsuTUI | ATCGAT | 1 cut(s) | 2865 |
| BtgZI | GCGATG | 1 cut(s) | 1639 |
| BtsCI | GGATG | 8 cut(s) | 709, 1006, 1054, 1257, 1780, 2125, 2263, 2548 |
| BtsI | GCAGTG | 3 cut(s) | 1008, 2148, 2235 |
| BtsIMutI | CAGTG | 8 cut(s) | 35, 184, 1008, 1397, 2148, 2210, 2235, 2331 |
| BtuMI | TCGCGA | 1 cut(s) | 588 |
| Cac8I | GCNNGC | 5 cut(s) | 211, 514, 1769, 2838, 3042 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2393 |
| CciI | TCATGA | 1 cut(s) | 1147 |
| CfoI | GCGC | 2 cut(s) | 1179, 2793 |
| Cfr10I | RCCGGY | 1 cut(s) | 209 |
| Cfr13I | GGNCC | 6 cut(s) | 40, 681, 807, 1303, 2044, 3061 |
| ClaI | ATCGAT | 1 cut(s) | 2865 |
| CpoI | CGGWCCG | 1 cut(s) | 807 |
| CseI | GACGC | 2 cut(s) | 215, 356 |
| Csp6I | GTAC | 5 cut(s) | 48, 310, 1396, 2416, 2641 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1529, 1564 |
| CspI | CGGWCCG | 1 cut(s) | 807 |
| CviQI | GTAC | 5 cut(s) | 48, 310, 1396, 2416, 2641 |
| DdeI | CTNAG | 9 cut(s) | 12, 1340, 1491, 1711, 2106, 2154, 2323, 2380, 2537 |
| DraIII | CACNNNGTG | 1 cut(s) | 2514 |
| EaeI | YGGCCR | 2 cut(s) | 1665, 1769 |
| Eam1104I | CTCTTC | 4 cut(s) | 1313, 1493, 1644, 3126 |
| EarI | CTCTTC | 4 cut(s) | 1313, 1493, 1644, 3126 |
| EciI | GGCGGA | 2 cut(s) | 478, 2259 |
| Eco130I | CCWWGG | 1 cut(s) | 2049 |
| Eco24I | GRGCYC | 1 cut(s) | 1270 |
| Eco32I | GATATC | 2 cut(s) | 580, 2179 |
| Eco47I | GGWCC | 4 cut(s) | 681, 807, 2044, 3061 |
| Eco57I | CTGAAG | 3 cut(s) | 134, 1246, 2940 |
| Eco72I | CACGTG | 1 cut(s) | 1728 |
| Eco81I | CCTNAGG | 1 cut(s) | 2537 |
| Eco88I | CYCGRG | 3 cut(s) | 1269, 1534, 3065 |
| Eco91I | GGTNACC | 2 cut(s) | 1553, 2195 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3110 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1303, 3061 |
| EcoO65I | GGTNACC | 2 cut(s) | 1553, 2195 |
| EcoRII | CCWGG | 6 cut(s) | 17, 496, 874, 2599, 2733, 2796 |
| EcoRV | GATATC | 2 cut(s) | 580, 2179 |
| EcoT14I | CCWWGG | 1 cut(s) | 2049 |
| EcoT22I | ATGCAT | 2 cut(s) | 1291, 2947 |
| EcoT38I | GRGCYC | 1 cut(s) | 1270 |
| ErhI | CCWWGG | 1 cut(s) | 2049 |
| Esp3I | CGTCTC | 1 cut(s) | 968 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1292, 1324, 1895, 1927 |
| FaqI | GGGAC | 5 cut(s) | 667, 1132, 2088, 2519, 3047 |
| FauNDI | CATATG | 1 cut(s) | 2563 |
| FbaI | TGATCA | 1 cut(s) | 2649 |
| FblI | GTMKAC | 4 cut(s) | 1484, 1908, 2014, 2248 |
| Fnu4HI | GCNGC | 7 cut(s) | 386, 435, 650, 1408, 2388, 2880, 3045 |
| FokI | GGATG | 8 cut(s) | 716, 993, 1041, 1264, 1787, 2132, 2270, 2535 |
| FriOI | GRGCYC | 1 cut(s) | 1270 |
| Fsp4HI | GCNGC | 7 cut(s) | 386, 435, 650, 1408, 2388, 2880, 3045 |
| FspBI | CTAG | 5 cut(s) | 78, 1353, 1638, 2006, 2889 |
| GlaI | GCGC | 2 cut(s) | 1178, 2792 |
| GluI | GCNGC | 7 cut(s) | 386, 435, 650, 1408, 2388, 2880, 3045 |
| GsuI | CTGGAG | 1 cut(s) | 1484 |
| HaeII | RGCGCY | 1 cut(s) | 1180 |
| HaeIII | GGCC | 7 cut(s) | 42, 420, 1305, 1667, 1771, 2066, 2535 |
| HapII | CCGG | 4 cut(s) | 210, 1142, 1772, 2980 |
| HgaI | GACGC | 2 cut(s) | 215, 356 |
| HhaI | GCGC | 2 cut(s) | 1179, 2793 |
| Hin1I | GRCGYC | 1 cut(s) | 207 |
| Hin6I | GCGC | 2 cut(s) | 1177, 2791 |
| HinP1I | GCGC | 2 cut(s) | 1177, 2791 |
| HincII | GTYRAC | 1 cut(s) | 1984 |
| HindII | GTYRAC | 1 cut(s) | 1984 |
| HindIII | AAGCTT | 5 cut(s) | 138, 146, 732, 2918, 2936 |
| HinfI | GANTC | 8 cut(s) | 759, 1075, 1709, 2317, 2366, 3101, 3134, 3139 |
| HpaII | CCGG | 4 cut(s) | 210, 1142, 1772, 2980 |
| HphI | GGTGA | 7 cut(s) | 19, 956, 998, 1547, 1601, 1873, 1993 |
| Hpy166II | GTNNAC | 6 cut(s) | 787, 1485, 1909, 1984, 2015, 2249 |
| Hpy188I | TCNGA | 9 cut(s) | 94, 231, 820, 1265, 1714, 2161, 2383, 2723, 2959 |
| Hpy8I | GTNNAC | 6 cut(s) | 787, 1485, 1909, 1984, 2015, 2249 |
| Hpy99I | CGWCG | 3 cut(s) | 48, 660, 2599 |
| HpyAV | CCTTC | 6 cut(s) | 419, 1065, 1241, 1294, 3064, 3106 |
| HpyCH4III | ACNGT | 9 cut(s) | 25, 179, 284, 1482, 1559, 2201, 2353, 2580, 2860 |
| HpyCH4IV | ACGT | 5 cut(s) | 312, 655, 1727, 2011, 2587 |
| HpyF3I | CTNAG | 9 cut(s) | 12, 1340, 1491, 1711, 2106, 2154, 2323, 2380, 2537 |
| HpySE526I | ACGT | 5 cut(s) | 312, 655, 1727, 2011, 2587 |
| Hsp92I | GRCGYC | 1 cut(s) | 207 |
| HspAI | GCGC | 2 cut(s) | 1177, 2791 |
| Kpn2I | TCCGGA | 1 cut(s) | 2979 |
| KroI | GCCGGC | 1 cut(s) | 209 |
| KroNI | GCCGGC | 1 cut(s) | 211 |
| Ksp22I | TGATCA | 1 cut(s) | 2649 |
| LmnI | GCTCC | 3 cut(s) | 1372, 2680, 2887 |
| Lsp1109I | GCAGC | 6 cut(s) | 421, 661, 1419, 2399, 2866, 3031 |
| MaeI | CTAG | 5 cut(s) | 78, 1353, 1638, 2006, 2889 |
| MaeII | ACGT | 5 cut(s) | 312, 655, 1727, 2011, 2587 |
| MfeI | CAATTG | 1 cut(s) | 840 |
| MflI | RGATCY | 3 cut(s) | 832, 2965, 2976 |
| MhlI | GDGCHC | 5 cut(s) | 409, 638, 1270, 1830, 2769 |
| MlyI | GAGTC | 3 cut(s) | 753, 1703, 3143 |
| MmeI | TCCRAC | 2 cut(s) | 254, 2909 |
| Mph1103I | ATGCAT | 2 cut(s) | 1291, 2947 |
| MreI | CGCCGGCG | 1 cut(s) | 209 |
| MroI | TCCGGA | 1 cut(s) | 2979 |
| MroNI | GCCGGC | 1 cut(s) | 209 |
| MseI | TTAA | 6 cut(s) | 1062, 1292, 1401, 2081, 2829, 3172 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1011, 1035 |
| MspA1I | CMGCKG | 1 cut(s) | 2422 |
| MspI | CCGG | 4 cut(s) | 210, 1142, 1772, 2980 |
| MspR9I | CCNGG | 7 cut(s) | 19, 498, 876, 1142, 2601, 2735, 2798 |
| MunI | CAATTG | 1 cut(s) | 840 |
| Mva1269I | GAATGC | 1 cut(s) | 2230 |
| MvaI | CCWGG | 6 cut(s) | 19, 498, 876, 2601, 2735, 2798 |
| MvnI | CGCG | 2 cut(s) | 588, 2793 |
| NaeI | GCCGGC | 1 cut(s) | 211 |
| NciI | CCSGG | 1 cut(s) | 1142 |
| NdeI | CATATG | 1 cut(s) | 2563 |
| NgoMIV | GCCGGC | 1 cut(s) | 209 |
| NlaIV | GGNNCC | 7 cut(s) | 406, 637, 683, 834, 1374, 2046, 3063 |
| NmuCI | GTSAC | 6 cut(s) | 7, 356, 397, 1279, 1553, 2566 |
| NruI | TCGCGA | 1 cut(s) | 588 |
| NsiI | ATGCAT | 2 cut(s) | 1291, 2947 |
| NspI | RCATGY | 1 cut(s) | 1049 |
| PaeR7I | CTCGAG | 1 cut(s) | 1534 |
| PagI | TCATGA | 1 cut(s) | 1147 |
| PasI | CCCWGGG | 1 cut(s) | 2734 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1733 |
| PctI | GAATGC | 1 cut(s) | 2230 |
| PdiI | GCCGGC | 1 cut(s) | 211 |
| PfeI | GAWTC | 5 cut(s) | 1075, 2317, 2366, 3101, 3139 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1064, 1115 |
| PfoI | TCCNGGA | 1 cut(s) | 874 |
| PkrI | GCNGC | 7 cut(s) | 387, 436, 651, 1409, 2389, 2881, 3046 |
| PleI | GAGTC | 3 cut(s) | 753, 1703, 3142 |
| PmaCI | CACGTG | 1 cut(s) | 1728 |
| PmlI | CACGTG | 1 cut(s) | 1728 |
| PpsI | GAGTC | 3 cut(s) | 753, 1703, 3142 |
| Ppu21I | YACGTR | 2 cut(s) | 313, 1728 |
| PpuMI | RGGWCCY | 1 cut(s) | 3061 |
| PshAI | GACNNNNGTC | 1 cut(s) | 236 |
| PsiI | TTATAA | 1 cut(s) | 480 |
| Psp5II | RGGWCCY | 1 cut(s) | 3061 |
| Psp6I | CCWGG | 6 cut(s) | 17, 496, 874, 2599, 2733, 2796 |
| PspCI | CACGTG | 1 cut(s) | 1728 |
| PspEI | GGTNACC | 2 cut(s) | 1553, 2195 |
| PspGI | CCWGG | 6 cut(s) | 17, 496, 874, 2599, 2733, 2796 |
| PspN4I | GGNNCC | 7 cut(s) | 406, 637, 683, 834, 1374, 2046, 3063 |
| PspPI | GGNCC | 6 cut(s) | 40, 681, 807, 1303, 2044, 3061 |
| PspPPI | RGGWCCY | 1 cut(s) | 3061 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2393 |
| PsuI | RGATCY | 3 cut(s) | 832, 2965, 2976 |
| PvuII | CAGCTG | 1 cut(s) | 2422 |
| RruI | TCGCGA | 1 cut(s) | 588 |
| RsaI | GTAC | 5 cut(s) | 49, 311, 1397, 2417, 2642 |
| RsaNI | GTAC | 5 cut(s) | 48, 310, 1396, 2416, 2641 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1011, 1035 |
| Rsr2I | CGGWCCG | 1 cut(s) | 807 |
| RsrII | CGGWCCG | 1 cut(s) | 807 |
| SaqAI | TTAA | 6 cut(s) | 1062, 1292, 1401, 2081, 2829, 3172 |
| SatI | GCNGC | 7 cut(s) | 386, 435, 650, 1408, 2388, 2880, 3045 |
| Sau96I | GGNCC | 6 cut(s) | 40, 681, 807, 1303, 2044, 3061 |
| SchI | GAGTC | 3 cut(s) | 753, 1703, 3143 |
| ScrFI | CCNGG | 7 cut(s) | 19, 498, 876, 1142, 2601, 2735, 2798 |
| SduI | GDGCHC | 5 cut(s) | 409, 638, 1270, 1830, 2769 |
| SfcI | CTRYAG | 3 cut(s) | 280, 766, 2770 |
| Sfr274I | CTCGAG | 1 cut(s) | 1534 |
| SgrAI | CRCCGGYG | 1 cut(s) | 209 |
| SinI | GGWCC | 4 cut(s) | 681, 807, 2044, 3061 |
| SlaI | CTCGAG | 1 cut(s) | 1534 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1011, 1035 |
| SmlI | CTYRAG | 5 cut(s) | 1187, 1534, 1656, 2933, 3107 |
| SmoI | CTYRAG | 5 cut(s) | 1187, 1534, 1656, 2933, 3107 |
| SpeI | ACTAGT | 1 cut(s) | 77 |
| SsiI | CCGC | 9 cut(s) | 386, 463, 561, 805, 810, 2117, 2128, 2270, 2897 |
| SspMI | CTAG | 5 cut(s) | 78, 1353, 1638, 2006, 2889 |
| StyD4I | CCNGG | 7 cut(s) | 17, 496, 874, 1140, 2599, 2733, 2796 |
| StyI | CCWWGG | 1 cut(s) | 2049 |
| TaaI | ACNGT | 9 cut(s) | 25, 179, 284, 1482, 1559, 2201, 2353, 2580, 2860 |
| TaiI | ACGT | 5 cut(s) | 315, 658, 1730, 2014, 2590 |
| TaqI | TCGA | 6 cut(s) | 1535, 1696, 1927, 2865, 3023, 3137 |
| TaqII | GACCGA | 1 cut(s) | 572 |
| TauI | GCSGC | 1 cut(s) | 388 |
| TfiI | GAWTC | 5 cut(s) | 1075, 2317, 2366, 3101, 3139 |
| Tru1I | TTAA | 6 cut(s) | 1062, 1292, 1401, 2081, 2829, 3172 |
| Tru9I | TTAA | 6 cut(s) | 1062, 1292, 1401, 2081, 2829, 3172 |
| TscAI | CASTG | 8 cut(s) | 35, 184, 1008, 1397, 2155, 2210, 2235, 2331 |
| TseFI | GTSAC | 6 cut(s) | 7, 356, 397, 1279, 1553, 2566 |
| TseI | GCWGC | 6 cut(s) | 434, 649, 1407, 2387, 2879, 3044 |
| Tsp45I | GTSAC | 6 cut(s) | 7, 356, 397, 1279, 1553, 2566 |
| TspRI | CASTG | 8 cut(s) | 35, 184, 1008, 1397, 2155, 2210, 2235, 2331 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1064, 1115 |
| VpaK11BI | GGWCC | 4 cut(s) | 681, 807, 2044, 3061 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3110 |
| XapI | RAATTY | 6 cut(s) | 593, 896, 1095, 1344, 1604, 1807 |
| XbaI | TCTAGA | 1 cut(s) | 1352 |
| XceI | RCATGY | 1 cut(s) | 1049 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1061 |
| XhoI | CTCGAG | 1 cut(s) | 1534 |
| XmiI | GTMKAC | 4 cut(s) | 1484, 1908, 2014, 2248 |
| XspI | CTAG | 5 cut(s) | 78, 1353, 1638, 2006, 2889 |
| Zsp2I | ATGCAT | 2 cut(s) | 1291, 2947 |