Rw1G036280

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
64177177 .. 64182493
5317 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G036280.1

Sequence Viewer

Length: 1779 bp
ATGAAGAGGATGAAAATGCAGCTGATTTTGTTGATCCTCCGACTCCGGTTGGCGAGAAGAAGCAGATGTCTAAGCAGATGGCCAAGCAGTACAGTCCAAGTGCTGTCGAGAAGGCGTGAGTTTCACTTTGTGCCAGATGCTAATAAGAGCTCTAAACCCCCGTTTGTGATTGTTTGGAAATGGAAAAATAATTACGGGGGCACTATACTACAGCAGCTACGTCGTCTGGGTGCTTCATTGGATTGGTCCCGTGAGTGCTTTACAATGGACGAGAAGAGGTCAAATGCTGTGACGGATGCTTTTGTGAGGCTTCATAAGCAAGGGCTTATCTACAGGGATAACCGCCTAGTGAATTGGGATTGTGTCTTGCGAACGGCAATATCTGAAATTGAGGTGGACTATATAGCTATAAAAGAAAGAACATCTCTTGGGGTTCCTGGAGACAAGAACCGTGTTGAATTTGGCGTTTTAACATCATTTGCATACCCTCTGGAAGACAATTTAGTGGAGTCTGGCTTCATGGAAGTGTATTTGCATCCAATGATTCGTGATGCGCAGTCCAAGTCCTTGGGTAATGTCATTGATCCTCTTGATGTGATCAATGGTATTTCACTGGAAGATCTACACAAGAAGCTTTCAGAGGGAAATTTGGACCCAAGGGAAATAGCTATAGCCAAAGAAGGCCAAAAAAAGGATTTTCCTGATGGTATTGCTGAATGTGGTTCTGATGCGCTACATTTTGCTCTGGTCTCATACACTGCTCAGTCTGATAAGATAAATCTGGATATCCAAAGGGTTGTCGGTTATCGGCAGTGGTGTAATAAACTTTGGAACACCATACGATTTGCTATGAGCAAACTTGGGGATGATTATGTTCCGCCGTCAACAGTAATCCCAGATGTGCTTCCATTTAGTTGCCGGTGGATACTCTCGGTAATAAATAAAGCCATCTCCAAAACTATTTTGTCATTGGAATCGTACGAGTTTTCAGATGCAGCCACTGCAGTGTATGCTTGGTGGCAGTACCAATTGTGTGATGTGTTCATTGCAGCCATAAAACCCTACTTTGCTGGAAACAATCCAAAGTTTGCATCTGAAAGGGGTTTTTCACAAGACACGCTCTGGTTGTGTCTGGATACTGGACTACGGCTGCTTCACCCATTTATGCCTTTCGTTACCGAAGAACTATGGCAGCGTCTCCCATCATCCAAGCATCACAATAGGGCAGCATCAATTATGATATGCGACTACCCATCCATCGTGGAGTGCTGGACAAATGAAAGGGTGGAGTCTGAAATGAGTCTTATTGACTCTATTGTTAGATCTCTCCGGTCACTGTCTCAAGAGAGTCGTGAAAGACGACCAGCTTTTGTGCTGTGTCGATCAATGTCAGATCGAGAGATAATATGTAGACAACAACTAGAGATTGAAACTCTTGCCAATCTGTCATCTCTGACGGTAATCAGTGAGAATGAAGCTGCCCCAACTGGATGTGCTGTGTCTGTTGTAAACGAAAACCTATCTGTTTATCTGAAGGTTCTAGGATCTCGTTCTGCAGAAATAGATCTTGAAAAGATCCGGAAAAAGATGGAAGACATTAAATTGCAACAGGAGAAGATTACGAAGGTGATGAATGCTGCTGGTTACAAAGAAAAGGTCCCCGAGAAGATACAAAAAGCTAATGCTGATAAACTTGAATCCCTCGAGAAGGAAAAACTGTCTCTAGAAGAGGCAAGCCAACATATGGAAGCGCAGATATCAAGCAATAAACAAGATTGA

Protein Analysis

592

Amino Acids

67.72

Weight (kDa)

8.1

Isoelectric Point (pI)

55.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tRNA-synt_1 PF00133 58 - 136 1.1e-23 tRNA synthetases class I (I, L, M and V)
tRNA-synt_1 PF00133 171 - 261 4.9e-06 tRNA synthetases class I (I, L, M and V)
Anticodon_1 PF08264 307 - 447 7.8e-32 Anticodon-binding domain of tRNA ligase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 555
AccB7I CCANNNNNTGG 1 cut(s) 1744
AccI GTMKAC 1 cut(s) 1411
AccIII TCCGGA 1 cut(s) 1578
AciI CCGC 2 cut(s) 343, 878
AclWI GGATC 4 cut(s) 28, 578, 1552, 1570
AcoI YGGCCR 1 cut(s) 80
AcsI RAATTY 2 cut(s) 458, 646
AcuI CTGAAG 1 cut(s) 1553
AdeI CACNNNGTG 1 cut(s) 130
AfaI GTAC 3 cut(s) 91, 980, 1025
AfiI CCNNNNNNNGG 3 cut(s) 691, 1708, 1744
AgsI TTSAA 4 cut(s) 458, 1430, 1571, 1697
AjnI CCWGG 1 cut(s) 436
AleI CACNNNNGTG 1 cut(s) 1004
AluBI AGCT 9 cut(s) 22, 150, 217, 407, 634, 668, 1367, 1478, 1679
AluI AGCT 9 cut(s) 22, 150, 217, 407, 634, 668, 1367, 1478, 1679
Alw21I GWGCWC 1 cut(s) 152
Alw26I GTCTC 5 cut(s) 435, 754, 1202, 1344, 1725
AlwI GGATC 4 cut(s) 28, 578, 1552, 1570
AlwNI CAGNNNCTG 1 cut(s) 1001
Ama87I CYCGRG 2 cut(s) 1661, 1703
Aor13HI TCCGGA 1 cut(s) 1578
AoxI GGCC 2 cut(s) 80, 682
ApeKI GCWGC 9 cut(s) 19, 214, 995, 1049, 1150, 1192, 1226, 1478, 1637
ApoI RAATTY 2 cut(s) 458, 646
ArsI GACNNNNNNTTYG 2 cut(s) 1641, 1673
AspLEI GCGC 3 cut(s) 556, 733, 1753
AspS9I GGNCC 3 cut(s) 246, 652, 1657
AsuHPI GGTGA 2 cut(s) 1148, 1639
AvaI CYCGRG 2 cut(s) 1661, 1703
AvaII GGWCC 3 cut(s) 246, 652, 1657
BaeGI GKGCMC 1 cut(s) 203
BalI TGGCCA 1 cut(s) 82
BanII GRGCYC 1 cut(s) 152
BbsI GAAGAC 2 cut(s) 501, 1599
Bbv12I GWGCWC 1 cut(s) 152
BbvI GCAGC 9 cut(s) 31, 226, 1007, 1061, 1137, 1204, 1238, 1465, 1624
BccI CCATC 7 cut(s) 72, 698, 956, 1210, 1261, 1265, 1582
BceAI ACGGC 3 cut(s) 390, 865, 1163
BcgI CGANNNNNNTGC 2 cut(s) 203, 237
BciT130I CCWGG 1 cut(s) 438
BciVI GTATCC 2 cut(s) 918, 1129
BclI TGATCA 1 cut(s) 597
BcoDI GTCTC 5 cut(s) 435, 754, 1202, 1344, 1725
BfaI CTAG 4 cut(s) 347, 1421, 1541, 1724
BfmI CTRYAG 5 cut(s) 209, 331, 669, 1002, 1554
BfuI GTATCC 2 cut(s) 918, 1129
BglII AGATCT 3 cut(s) 619, 1322, 1564
BisI GCNGC 9 cut(s) 20, 215, 996, 1050, 1151, 1193, 1227, 1479, 1638
BlsI GCNGC 9 cut(s) 21, 216, 997, 1051, 1152, 1194, 1228, 1480, 1639
Bme1390I CCNGG 1 cut(s) 438
Bme18I GGWCC 3 cut(s) 246, 652, 1657
BmeT110I CYCGRG 2 cut(s) 1661, 1703
BmgT120I GGNCC 3 cut(s) 246, 652, 1657
BmiI GGNNCC 4 cut(s) 248, 435, 654, 1659
BmrFI CCNGG 1 cut(s) 438
BmsI GCATC 9 cut(s) 127, 286, 541, 544, 718, 982, 1100, 1222, 1238
BpiI GAAGAC 2 cut(s) 501, 1599
BpmI CTGGAG 1 cut(s) 459
BpuEI CTTGAG 1 cut(s) 1326
BsaI GGTCTC 1 cut(s) 754
BsaJI CCNNGG 2 cut(s) 567, 656
BsaWI WCCGGW 3 cut(s) 45, 1329, 1578
Bsc4I CCNNNNNNNGG 3 cut(s) 691, 1708, 1744
Bse118I RCCGGY 1 cut(s) 918
Bse1I ACTGG 3 cut(s) 618, 1144, 1492
Bse3DI GCAATG 1 cut(s) 1044
BseAI TCCGGA 1 cut(s) 1578
BseBI CCWGG 1 cut(s) 438
BseDI CCNNGG 2 cut(s) 567, 656
BseGI GGATG 7 cut(s) 15, 301, 535, 871, 1205, 1253, 1496
BseLI CCNNNNNNNGG 3 cut(s) 691, 1708, 1744
BseMI GCAATG 1 cut(s) 1044
BseMII CTCAG 1 cut(s) 776
BseNI ACTGG 3 cut(s) 618, 1144, 1492
BseSI GKGCMC 1 cut(s) 203
BseXI GCAGC 9 cut(s) 31, 226, 1007, 1061, 1137, 1204, 1238, 1465, 1624
BshFI GGCC 2 cut(s) 82, 684
BsiHKAI GWGCWC 1 cut(s) 152
BsiHKCI CYCGRG 2 cut(s) 1661, 1703
BsiSI CCGG 4 cut(s) 46, 919, 1330, 1579
BsiWI CGTACG 1 cut(s) 978
BslFI GGGAC 2 cut(s) 232, 1643
BslI CCNNNNNNNGG 3 cut(s) 691, 1708, 1744
BsmAI GTCTC 5 cut(s) 435, 754, 1202, 1344, 1725
BsmBI CGTCTC 1 cut(s) 1202
BsmFI GGGAC 2 cut(s) 232, 1643
BsmI GAATGC 1 cut(s) 1639
BsnI GGCC 2 cut(s) 82, 684
Bso31I GGTCTC 1 cut(s) 754
BsoBI CYCGRG 2 cut(s) 1661, 1703
Bsp1286I GDGCHC 2 cut(s) 152, 203
Bsp13I TCCGGA 1 cut(s) 1578
BspACI CCGC 2 cut(s) 343, 878
BspANI GGCC 2 cut(s) 82, 684
BspCNI CTCAG 1 cut(s) 775
BspEI TCCGGA 1 cut(s) 1578
BspLI GGNNCC 4 cut(s) 248, 435, 654, 1659
BspMAI CTGCAG 2 cut(s) 1006, 1558
BspPI GGATC 4 cut(s) 28, 578, 1552, 1570
BspTNI GGTCTC 1 cut(s) 754
BsrDI GCAATG 1 cut(s) 1044
BsrFI RCCGGY 1 cut(s) 918
BsrI ACTGG 3 cut(s) 618, 1144, 1492
BssAI RCCGGY 1 cut(s) 918
BssECI CCNNGG 2 cut(s) 567, 656
BssT1I CCWWGG 2 cut(s) 567, 656
Bst2UI CCWGG 1 cut(s) 438
Bst4CI ACNGT 6 cut(s) 94, 452, 889, 1338, 1459, 1719
Bst6I CTCTTC 2 cut(s) 269, 1722
BstAPI GCANNNNNTGC 2 cut(s) 1001, 1010
BstC8I GCNNGC 1 cut(s) 1735
BstDEI CTNAG 2 cut(s) 71, 762
BstENI CCTNNNNNAGG 1 cut(s) 1706
BstF5I GGATG 7 cut(s) 15, 301, 535, 871, 1205, 1253, 1496
BstHHI GCGC 3 cut(s) 556, 733, 1753
BstMAI GTCTC 5 cut(s) 435, 754, 1202, 1344, 1725
BstMWI GCNNNNNNNGC 3 cut(s) 316, 1001, 1010
BstNI CCWGG 1 cut(s) 438
BstSCI CCNGG 1 cut(s) 436
BstSFI CTRYAG 5 cut(s) 209, 331, 669, 1002, 1554
BstSLI GKGCMC 1 cut(s) 203
BstV1I GCAGC 9 cut(s) 31, 226, 1007, 1061, 1137, 1204, 1238, 1465, 1624
BstV2I GAAGAC 2 cut(s) 501, 1599
BstX2I RGATCY 5 cut(s) 619, 1322, 1544, 1564, 1575
BstXI CCANNNNNNTGG 1 cut(s) 568
BstYI RGATCY 5 cut(s) 619, 1322, 1544, 1564, 1575
BsuI GTATCC 2 cut(s) 918, 1129
BsuRI GGCC 2 cut(s) 82, 684
BtsCI GGATG 7 cut(s) 15, 301, 535, 871, 1205, 1253, 1496
BtsI GCAGTG 4 cut(s) 756, 818, 999, 1011
BtsIMutI CAGTG 7 cut(s) 611, 756, 818, 999, 1011, 1334, 1471
Cac8I GCNNGC 1 cut(s) 1735
CaiI CAGNNNCTG 1 cut(s) 1001
CfoI GCGC 3 cut(s) 556, 733, 1753
Cfr10I RCCGGY 1 cut(s) 918
Cfr13I GGNCC 3 cut(s) 246, 652, 1657
CseI GACGC 1 cut(s) 1184
Csp6I GTAC 3 cut(s) 90, 979, 1024
CviAII CATG 1 cut(s) 520
CviQI GTAC 3 cut(s) 90, 979, 1024
DdeI CTNAG 2 cut(s) 71, 762
DraIII CACNNNGTG 1 cut(s) 130
EaeI YGGCCR 1 cut(s) 80
Eam1104I CTCTTC 2 cut(s) 269, 1722
EarI CTCTTC 2 cut(s) 269, 1722
EciI GGCGGA 1 cut(s) 867
Ecl136II GAGCTC 1 cut(s) 150
Eco130I CCWWGG 2 cut(s) 567, 656
Eco24I GRGCYC 1 cut(s) 152
Eco31I GGTCTC 1 cut(s) 754
Eco32I GATATC 2 cut(s) 787, 1758
Eco47I GGWCC 3 cut(s) 246, 652, 1657
Eco53kI GAGCTC 1 cut(s) 150
Eco57I CTGAAG 1 cut(s) 1553
Eco88I CYCGRG 2 cut(s) 1661, 1703
EcoICRI GAGCTC 1 cut(s) 150
EcoNI CCTNNNNNAGG 1 cut(s) 1706
EcoO109I RGGNCCY 1 cut(s) 1657
EcoRII CCWGG 1 cut(s) 436
EcoRV GATATC 2 cut(s) 787, 1758
EcoT14I CCWWGG 2 cut(s) 567, 656
EcoT38I GRGCYC 1 cut(s) 152
ErhI CCWWGG 2 cut(s) 567, 656
Esp3I CGTCTC 1 cut(s) 1202
FaeI CATG 1 cut(s) 523
FaqI GGGAC 2 cut(s) 232, 1643
FatI CATG 1 cut(s) 519
FauNDI CATATG 1 cut(s) 1743
FbaI TGATCA 1 cut(s) 597
FblI GTMKAC 1 cut(s) 1411
Fnu4HI GCNGC 9 cut(s) 20, 215, 996, 1050, 1151, 1193, 1227, 1479, 1638
FokI GGATG 7 cut(s) 22, 308, 522, 878, 1192, 1240, 1503
FriOI GRGCYC 1 cut(s) 152
Fsp4HI GCNGC 9 cut(s) 20, 215, 996, 1050, 1151, 1193, 1227, 1479, 1638
FspBI CTAG 4 cut(s) 347, 1421, 1541, 1724
FspI TGCGCA 1 cut(s) 555
GlaI GCGC 3 cut(s) 555, 732, 1752
GluI GCNGC 9 cut(s) 20, 215, 996, 1050, 1151, 1193, 1227, 1479, 1638
GsuI CTGGAG 1 cut(s) 459
HaeIII GGCC 2 cut(s) 82, 684
HapII CCGG 4 cut(s) 46, 919, 1330, 1579
HgaI GACGC 1 cut(s) 1184
HhaI GCGC 3 cut(s) 556, 733, 1753
Hin1II CATG 1 cut(s) 523
Hin6I GCGC 3 cut(s) 554, 731, 1751
HinP1I GCGC 3 cut(s) 554, 731, 1751
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HindIII AAGCTT 1 cut(s) 632
HinfI GANTC 9 cut(s) 42, 509, 544, 974, 1289, 1300, 1310, 1348, 1697
HpaII CCGG 4 cut(s) 46, 919, 1330, 1579
HphI GGTGA 2 cut(s) 1148, 1639
Hpy166II GTNNAC 4 cut(s) 397, 885, 1412, 1510
Hpy8I GTNNAC 4 cut(s) 397, 885, 1412, 1510
Hpy99I CGWCG 1 cut(s) 225
HpyAV CCTTC 5 cut(s) 105, 674, 1528, 1618, 1702
HpyCH4III ACNGT 6 cut(s) 94, 452, 889, 1338, 1459, 1719
HpyCH4IV ACGT 1 cut(s) 220
HpyCH4V TGCA 9 cut(s) 19, 482, 535, 995, 1004, 1049, 1091, 1556, 1606
HpyF10VI GCNNNNNNNGC 3 cut(s) 316, 1001, 1010
HpyF3I CTNAG 2 cut(s) 71, 762
HpySE526I ACGT 1 cut(s) 220
Hsp92II CATG 1 cut(s) 523
HspAI GCGC 3 cut(s) 554, 731, 1751
Kpn2I TCCGGA 1 cut(s) 1578
Ksp22I TGATCA 1 cut(s) 597
Lsp1109I GCAGC 9 cut(s) 31, 226, 1007, 1061, 1137, 1204, 1238, 1465, 1624
LweI GCATC 9 cut(s) 127, 286, 541, 544, 718, 982, 1100, 1222, 1238
MaeI CTAG 4 cut(s) 347, 1421, 1541, 1724
MaeII ACGT 1 cut(s) 220
MaeIII GTNAC 4 cut(s) 289, 1174, 1332, 1643
MfeI CAATTG 1 cut(s) 1028
MflI RGATCY 5 cut(s) 619, 1322, 1544, 1564, 1575
MhlI GDGCHC 2 cut(s) 152, 203
MlsI TGGCCA 1 cut(s) 82
MluCI AATT 9 cut(s) 190, 352, 387, 458, 499, 646, 1028, 1233, 1601
MluNI TGGCCA 1 cut(s) 82
MlyI GAGTC 6 cut(s) 36, 518, 1298, 1304, 1309, 1357
MmeI TCCRAC 1 cut(s) 64
MnlI CCTC 9 cut(s) 47, 270, 300, 385, 498, 597, 634, 1712, 1723
Mox20I TGGCCA 1 cut(s) 82
MroI TCCGGA 1 cut(s) 1578
MscI TGGCCA 1 cut(s) 82
MseI TTAA 2 cut(s) 470, 1599
MslI CAYNNNNRTG 2 cut(s) 524, 1004
Msp20I TGGCCA 1 cut(s) 82
MspA1I CMGCKG 1 cut(s) 22
MspI CCGG 4 cut(s) 46, 919, 1330, 1579
MspR9I CCNGG 1 cut(s) 438
MunI CAATTG 1 cut(s) 1028
Mva1269I GAATGC 1 cut(s) 1639
MvaI CCWGG 1 cut(s) 438
MwoI GCNNNNNNNGC 3 cut(s) 316, 1001, 1010
NdeI CATATG 1 cut(s) 1743
NlaIII CATG 1 cut(s) 523
NlaIV GGNNCC 4 cut(s) 248, 435, 654, 1659
NmuCI GTSAC 2 cut(s) 289, 1332
NsbI TGCGCA 1 cut(s) 555
OliI CACNNNNGTG 1 cut(s) 1004
PaeR7I CTCGAG 1 cut(s) 1703
PcsI WCGNNNNNNNCGW 1 cut(s) 1357
PctI GAATGC 1 cut(s) 1639
PfeI GAWTC 3 cut(s) 544, 974, 1697
Pfl23II CGTACG 1 cut(s) 978
PflMI CCANNNNNTGG 1 cut(s) 1744
PfoI TCCNGGA 1 cut(s) 436
PkrI GCNGC 9 cut(s) 21, 216, 997, 1051, 1152, 1194, 1228, 1480, 1639
PleI GAGTC 6 cut(s) 36, 517, 1297, 1304, 1308, 1356
PpsI GAGTC 6 cut(s) 36, 517, 1297, 1304, 1308, 1356
PpuMI RGGWCCY 1 cut(s) 1657
Psp124BI GAGCTC 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 1657
Psp6I CCWGG 1 cut(s) 436
PspGI CCWGG 1 cut(s) 436
PspLI CGTACG 1 cut(s) 978
PspN4I GGNNCC 4 cut(s) 248, 435, 654, 1659
PspPI GGNCC 3 cut(s) 246, 652, 1657
PspPPI RGGWCCY 1 cut(s) 1657
PstI CTGCAG 2 cut(s) 1006, 1558
PstNI CAGNNNCTG 1 cut(s) 1001
PsuI RGATCY 5 cut(s) 619, 1322, 1544, 1564, 1575
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 3 cut(s) 91, 980, 1025
RsaNI GTAC 3 cut(s) 90, 979, 1024
RseI CAYNNNNRTG 2 cut(s) 524, 1004
SacI GAGCTC 1 cut(s) 152
SaqAI TTAA 2 cut(s) 470, 1599
SatI GCNGC 9 cut(s) 20, 215, 996, 1050, 1151, 1193, 1227, 1479, 1638
Sau96I GGNCC 3 cut(s) 246, 652, 1657
SchI GAGTC 6 cut(s) 36, 518, 1298, 1304, 1309, 1357
ScrFI CCNGG 1 cut(s) 438
SduI GDGCHC 2 cut(s) 152, 203
SfaNI GCATC 9 cut(s) 127, 286, 541, 544, 718, 982, 1100, 1222, 1238
SfcI CTRYAG 5 cut(s) 209, 331, 669, 1002, 1554
Sfr274I CTCGAG 1 cut(s) 1703
SinI GGWCC 3 cut(s) 246, 652, 1657
SlaI CTCGAG 1 cut(s) 1703
SmiMI CAYNNNNRTG 2 cut(s) 524, 1004
SmlI CTYRAG 2 cut(s) 1341, 1703
SmoI CTYRAG 2 cut(s) 1341, 1703
Sse9I AATT 9 cut(s) 190, 352, 387, 458, 499, 646, 1028, 1233, 1601
SsiI CCGC 2 cut(s) 343, 878
SspMI CTAG 4 cut(s) 347, 1421, 1541, 1724
SstI GAGCTC 1 cut(s) 152
StyD4I CCNGG 1 cut(s) 436
StyI CCWWGG 2 cut(s) 567, 656
TaaI ACNGT 6 cut(s) 94, 452, 889, 1338, 1459, 1719
TaiI ACGT 1 cut(s) 223
TaqI TCGA 4 cut(s) 107, 1381, 1396, 1704
TasI AATT 9 cut(s) 190, 352, 387, 458, 499, 646, 1028, 1233, 1601
TatI WGTACW 1 cut(s) 89
TfiI GAWTC 3 cut(s) 544, 974, 1697
Tru1I TTAA 2 cut(s) 470, 1599
Tru9I TTAA 2 cut(s) 470, 1599
TscAI CASTG 7 cut(s) 618, 763, 818, 1006, 1011, 1341, 1471
TseFI GTSAC 2 cut(s) 289, 1332
TseI GCWGC 9 cut(s) 19, 214, 995, 1049, 1150, 1192, 1226, 1478, 1637
Tsp45I GTSAC 2 cut(s) 289, 1332
TspDTI ATGAA 9 cut(s) 17, 26, 225, 302, 508, 1033, 1293, 1488, 1646
TspGWI ACGGA 1 cut(s) 308
TspRI CASTG 7 cut(s) 618, 763, 818, 1006, 1011, 1341, 1471
Van91I CCANNNNNTGG 1 cut(s) 1744
VpaK11BI GGWCC 3 cut(s) 246, 652, 1657
XagI CCTNNNNNAGG 1 cut(s) 1706
XapI RAATTY 2 cut(s) 458, 646
XbaI TCTAGA 1 cut(s) 1723
XhoI CTCGAG 1 cut(s) 1703
XmiI GTMKAC 1 cut(s) 1411
XspI CTAG 4 cut(s) 347, 1421, 1541, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.