Rorug07G0271800

Belongs to the class-I aminoacyl-tRNA synthetase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
25707912 .. 25721469
13558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0271800.1

Sequence Viewer

Length: 2079 bp
ATGGAGACCCAAGAGGCTTTAATAGAAGAAGAGCTGCTGAACGTGGAGCTTGAAATTGAAAGCGTCCAAGACCAAATCAAAGTATTGCTTGACCAACAAGAGAGGTTGTATGAAAGACAATCTGAACTACAAGCTCTACTGGAAGCTTCCAAAGGTCCTGGATCCCCTGTTAATGGGGATTCAACAGCCACAGAAGACTGGTCTGGATCATTTGAGTGGGATTCTCAAGCTGATGATGTTAGGTTCAATGTATTTGGCATCTCCACATATCGTGCAAATCAGCGAGAGATTATTAATGCTGTCATGAGTCGAAGAGATGTTCTAGTGATTATGGCTGCAGGAGGTGGCAAGAGTCTCTGTTACCAACTTCCAGCTATTCTTCGTGATGGAGTTGCTCTTGTTGTCAGCCCACTGCTTTCTTTGATTCAGGACCAGGTGATGGGCTTGGAAGCTTTAGGGATTCCAGCTCATATGTTGACATCAACTACAAGTAAGGAGGAAGAGAAGTTAATATACAAGGCCCTGGAAAAGATATCAAAGAGTAAGAGGTTTATGTCAAAACTTGAAAAGTGCCATCATGCTGGTCGTCTCTCCCTAATTTCTATTGATGAGGCACATTGTTGCAGCCAATGGGGCCATGATTTTCGACCCGATTACAAAAATCTTGGTATCCTCAAGACTCAGTTTCCCAATGTTCCAGTGATTGCTTTGACTGCAACTGCTACCCAGAAAGTCCAAAGTGATCTGATGGATATGCTCCACATTCCAAGATGTGTAAAGTTTGTCAGCACAGTCAACAGGCCAAATCTCTTTTATATGGTACGAGAGAAGTCTTCAATTGGCAAAGTGGTGGTTGATGAAATCGCTGAATTCATTCGAGACTCTTATTCAGACAACGATTCTGGCATCGTTTATTGCTTCTCTAGAAAAGAATGTGAACAGGTTGCAAAGGAGTTGCGTGAGAGGGGAATATCAGCTCATCATTATCATGCAGATATGGACGTAAATGCACGTGAAAATGTTCATATGCGGTGGAGCAAGAGCAAACTACAGGTCATCGTTGGCACTGTAGCATTTGGTATGGGAATCAACAAACCTGATGTCAGGTTCGTCATCCATCACAGCTTGAGTAAATCAATGGAAACATACTACCAGGAAAGTGGCCGTGCTGGTCGAGATGGACTCCCTTCTCAATGCCTACTTTACTTTAGACCTGCTGACATGCCTAGGCAGAGTTCAATGGTCTTCTATGAAAACTCCGGACTGCAGAACCTTTATGACATTGTACGCTATTGTCAGTCAAAAAGACAATGCCGTCGTAGCTCTTTCTTTCGCCACTTTGCTGAGCCATTACAGGACTGCAATGGGATGTGTGACAACTGTGCATTTTCAAATGAGGTTAAAGAAGTAGACGTCTCTCGTCATGCGAAGCTTATGGTTACTATGCTGAAAGATGTGCAAGAAAATGATCAGAGATTGACAGTGTTGCAATTAGTTGATAAAATTAAGATAAAGCGCAAGGAAGTAGGTTCGGAGCTGAAGAGAGAGGAAATAGAGCAGCTTGTCATCCAGCTTATATTAGGTAGAGTTTTGAAAGAAGAATTTCAGCATACAGCTTATGCCACAAATGCATATGTAACATTAGGACCCTTGGCAAAGCAGGTATTGCAAGGGAGAAGTAGTGTTAAGCTTGAAATGTCTACCGGACAGAAGAACGTAGCTGGTGTAAGATCAGTTAAACGTAGTCGTGCTTCTTCATGTCTGGAACAAAAGCTCGACGGGCTGCGGAAGGAACTCTCTTCAGATCATGGAGGGATATTCCCTCATTCTGTTCTGTCTACTCAACAAATCAGCATGATAGATGACCAGAAGCCAAATTCAATGAAACAGTTGGAGAAGATCATTGGGAAAGTCAAGACAGAGAAATACGGAAGTAGAATCCTTGAACAAGTGAGTATGTATGCAGAAGCAAAGCAGCCTGTTGAGGATAAAGAAGAACAAGAAACTGAAAATAGATCCTCAAAAAGGCTAAAGAACACAGAGCCGCTTCTTATAGAGAGTAGTGATGATGAATCATGA

Protein Analysis

692

Amino Acids

78.45

Weight (kDa)

6.43

Isoelectric Point (pI)

53.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 92 - 246 2.9e-22 DEAD/DEAH box helicase
Helicase_C PF00271 289 - 394 1.7e-19 Helicase conserved C-terminal domain
RecQ_Zn_bind PF16124 406 - 461 3.4e-10 RecQ zinc-binding
HRDC PF00570 590 - 649 2e-06 HRDC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000332)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14610 AT1G27160
fragaria_vesca FvH4_5g33250 FvH4_7g01700 FvH4_7g28940 FvH4_7g28940 FvH4_7g28940
malus_domestica MD01G1196000.v1.1 MD03G1000400.v1.1 MD06G1107900.v1.1 MD07G1262800.v1.1 MD15G1255900.v1.1 MD15G1433500.v1.1 MD17G1256800.v1.1
prunus_persica Prupe.1G576900_v2.0.a1 Prupe.1G576900_v2.0.a1 Prupe.2G289400_v2.0.a1 Prupe.2G289400_v2.0.a1
pyrus_communis pycom01g20660 pycom03g00060 pycom07g24190 pycom15g38270 pycom17g25900
rosa_chinensis RchiOBHm_Chr1g0376611 RchiOBHm_Chr2g0151751 RchiOBHm_Chr2g0151761 RchiOBHm_Chr5g0049821 RchiOBHm_Chr5g0066661 RchiOBHm_Chr7g0182401 RchiOBHm_Chr7g0218391 RchiOBHm_Chr7g0218401 RchiOBHm_Chr7g0218411 RchiOBHm_Chr7g0232241 RchiOBHm_Chr7g0232251 RchiOBHm_Chr7g0232281 RchiOBHm_Chr7g0232291 RchiOBHm_Chr7g0232301
rosa_laevigata RLG00000001360 RLG00000001362 RLG00000001368 RLG00000005125 RLG00000005126 RLG00000026593
rosa_multiflora Rmu_co8187388.1_g000001 Rmu_co8244885.1_g000001 Rmu_co8371739.1_g000001 Rmu_co8421977.1_g000001 Rmu_co8457289.1_g000001 Rmu_sc0000239.1_g000041 Rmu_sc0000927.1_g000001 Rmu_sc0000945.1_g000003 Rmu_sc0002042.1_g000017 Rmu_sc0004136.1_g000003 Rmu_sc0005294.1_g000036 Rmu_sc0017871.1_g000001 Rmu_sc0029500.1_g000001 Rmu_sc0037577.1_g000001 Rmu_sc0037577.1_g000002 Rmu_ssc0000034.1_g000001 Rmu_ssc0000115.1_g000001
rosa_roxburghii Rroxscaffold_2G00112130 Rroxscaffold_3G00228490 Rroxscaffold_3G00228520 Rroxscaffold_3G00228530 Rroxscaffold_3G00228620 Rroxscaffold_3G00228650 Rroxscaffold_4G00281940
rosa_rugosa Rorug01G0396800 Rorug01G0396800 Rorug06G0073800 Rorug06G0073900 Rorug06G0447200 Rorug06G0447200 Rorug06G0447300 Rorug06G0447400 Rorug07G0270800 Rorug07G0271800 Rorug07G0271900 Rorug07G0272000 Rorug07G0272200 Rorug07G0272300
rosa_samantha Rh1AG413400 Rh1BG373100 Rh1CG021500 Rh1CG151000 Rh1CG387000 Rh1DG404000 Rh2BG502300 Rh2DG513300 Rh3AG126000 Rh4AG156700 Rh7AG050700 Rh7AG050800 Rh7AG425000 Rh7AG425500 Rh7AG426200 Rh7BG050400 Rh7BG399800 Rh7BG399900 Rh7BG400000 Rh7CG052000 Rh7CG445400 Rh7CG445600 Rh7CG445900 Rh7CG446000 Rh7DG417300
rosa_wichuraiana Rw0G007060 Rw1G036250 Rw1G036280 Rw7G027040 Rw7G035320 Rw7G035350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1314
AatII GACGTC 1 cut(s) 1416
Acc36I ACCTGC 2 cut(s) 1222, 1651
AccB7I CCANNNNNTGG 1 cut(s) 439
AccI GTMKAC 3 cut(s) 1410, 1700, 1838
AccIII TCCGGA 1 cut(s) 1259
AciI CCGC 3 cut(s) 1030, 1786, 2045
AclWI GGATC 4 cut(s) 156, 169, 214, 2010
AcoI YGGCCR 1 cut(s) 1162
AcsI RAATTY 3 cut(s) 869, 1601, 1876
AcuI CTGAAG 2 cut(s) 1559, 1785
AcvI CACGTG 1 cut(s) 1013
AcyI GRCGYC 1 cut(s) 1413
AfaI GTAC 2 cut(s) 822, 1287
AfiI CCNNNNNNNGG 3 cut(s) 173, 439, 2025
AjnI CCWGG 4 cut(s) 157, 432, 522, 1152
Alw26I GTCTC 4 cut(s) 359, 593, 873, 1420
AlwI GGATC 4 cut(s) 156, 169, 214, 2010
Aor13HI TCCGGA 1 cut(s) 1259
AoxI GGCC 4 cut(s) 519, 634, 800, 1162
ApeKI GCWGC 6 cut(s) 34, 335, 624, 1558, 1783, 1975
ApoI RAATTY 3 cut(s) 869, 1601, 1876
ArsI GACNNNNNNTTYG 4 cut(s) 1038, 1070, 1086, 1118
AseI ATTAAT 1 cut(s) 294
Asp700I GAANNNNTTC 3 cut(s) 873, 1020, 1602
AspA2I CCTAGG 1 cut(s) 1226
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 5 cut(s) 155, 430, 520, 634, 1646
AsuHPI GGTGA 1 cut(s) 448
AvaII GGWCC 3 cut(s) 155, 430, 1646
AvrII CCTAGG 1 cut(s) 1226
BamHI GGATCC 1 cut(s) 161
BarI GAAGNNNNNNTAC 4 cut(s) 497, 529, 1735, 1767
BbrPI CACGTG 1 cut(s) 1013
BbsI GAAGAC 3 cut(s) 201, 825, 1237
BbvI GCAGC 6 cut(s) 21, 322, 636, 1570, 1770, 1987
BccI CCATC 6 cut(s) 380, 433, 582, 742, 1125, 1172
BceAI ACGGC 2 cut(s) 1149, 1299
BciT130I CCWGG 4 cut(s) 159, 434, 524, 1154
BciVI GTATCC 1 cut(s) 680
BclI TGATCA 1 cut(s) 1468
BcoDI GTCTC 4 cut(s) 359, 593, 873, 1420
BfaI CTAG 3 cut(s) 323, 924, 1227
BfmI CTRYAG 4 cut(s) 336, 1049, 1068, 1265
BfuAI ACCTGC 2 cut(s) 1222, 1651
BfuI GTATCC 1 cut(s) 680
BglI GCCNNNNNGGC 1 cut(s) 633
BisI GCNGC 7 cut(s) 35, 336, 625, 1559, 1784, 1976, 2045
BlnI CCTAGG 1 cut(s) 1226
BlpI GCTNAGC 1 cut(s) 1344
BlsI GCNGC 7 cut(s) 36, 337, 626, 1560, 1785, 1977, 2046
Bme1390I CCNGG 4 cut(s) 159, 434, 524, 1154
Bme18I GGWCC 3 cut(s) 155, 430, 1646
BmgT120I GGNCC 5 cut(s) 155, 430, 520, 634, 1646
BmiI GGNNCC 3 cut(s) 163, 635, 1648
BmrFI CCNGG 4 cut(s) 159, 434, 524, 1154
BmsI GCATC 2 cut(s) 267, 915
BpiI GAAGAC 3 cut(s) 201, 825, 1237
BplI GAGNNNNNCTC 2 cut(s) 1167, 1199
Bpu1102I GCTNAGC 1 cut(s) 1344
BpuEI CTTGAG 3 cut(s) 210, 659, 1147
BsaAI YACGTR 1 cut(s) 1013
BsaHI GRCGYC 1 cut(s) 1413
BsaJI CCNNGG 3 cut(s) 522, 1226, 1650
BsaWI WCCGGW 2 cut(s) 1259, 1703
BsaXI ACNNNNNCTCC 2 cut(s) 1666, 1696
Bsc4I CCNNNNNNNGG 3 cut(s) 173, 439, 2025
Bse1I ACTGG 3 cut(s) 144, 203, 698
Bse3DI GCAATG 1 cut(s) 1369
BseAI TCCGGA 1 cut(s) 1259
BseBI CCWGG 4 cut(s) 159, 434, 524, 1154
BseDI CCNNGG 3 cut(s) 522, 1226, 1650
BseGI GGATG 3 cut(s) 1113, 1374, 1566
BseLI CCNNNNNNNGG 3 cut(s) 173, 439, 2025
BseMI GCAATG 1 cut(s) 1369
BseMII CTCAG 2 cut(s) 695, 1335
BseNI ACTGG 3 cut(s) 144, 203, 698
BseXI GCAGC 6 cut(s) 21, 322, 636, 1570, 1770, 1987
BshFI GGCC 4 cut(s) 521, 636, 802, 1164
BsiSI CCGG 2 cut(s) 1260, 1704
BslI CCNNNNNNNGG 3 cut(s) 173, 439, 2025
BsmAI GTCTC 4 cut(s) 359, 593, 873, 1420
BsmBI CGTCTC 2 cut(s) 593, 1420
BsnI GGCC 4 cut(s) 521, 636, 802, 1164
Bsp13I TCCGGA 1 cut(s) 1259
Bsp143I GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
Bsp1720I GCTNAGC 1 cut(s) 1344
BspACI CCGC 3 cut(s) 1030, 1786, 2045
BspANI GGCC 4 cut(s) 521, 636, 802, 1164
BspCNI CTCAG 2 cut(s) 694, 1336
BspEI TCCGGA 1 cut(s) 1259
BspHI TCATGA 2 cut(s) 303, 2075
BspLI GGNNCC 3 cut(s) 163, 635, 1648
BspMAI CTGCAG 2 cut(s) 340, 1269
BspMI ACCTGC 2 cut(s) 1222, 1651
BspPI GGATC 4 cut(s) 156, 169, 214, 2010
BspQI GCTCTTC 1 cut(s) 24
BsrDI GCAATG 1 cut(s) 1369
BsrI ACTGG 3 cut(s) 144, 203, 698
BssECI CCNNGG 3 cut(s) 522, 1226, 1650
BssMI GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
BssNI GRCGYC 1 cut(s) 1413
BssT1I CCWWGG 2 cut(s) 1226, 1650
Bst2UI CCWGG 4 cut(s) 159, 434, 524, 1154
Bst4CI ACNGT 5 cut(s) 793, 1069, 1382, 1483, 1890
Bst6I CTCTTC 5 cut(s) 24, 307, 495, 1535, 1804
BstACI GRCGYC 1 cut(s) 1413
BstAPI GCANNNNNTGC 1 cut(s) 1666
BstBAI YACGTR 1 cut(s) 1013
BstDEI CTNAG 2 cut(s) 681, 1344
BstENI CCTNNNNNAGG 1 cut(s) 2023
BstF5I GGATG 3 cut(s) 1113, 1374, 1566
BstHHI GCGC 1 cut(s) 1518
BstKTI GATC 8 cut(s) 164, 209, 745, 1471, 1733, 1807, 1902, 2018
BstMAI GTCTC 4 cut(s) 359, 593, 873, 1420
BstMBI GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
BstMWI GCNNNNNNNGC 6 cut(s) 633, 713, 1320, 1628, 1666, 1780
BstNI CCWGG 4 cut(s) 159, 434, 524, 1154
BstNSI RCATGY 1 cut(s) 1225
BstSCI CCNGG 4 cut(s) 157, 432, 522, 1152
BstSFI CTRYAG 4 cut(s) 336, 1049, 1068, 1265
BstV1I GCAGC 6 cut(s) 21, 322, 636, 1570, 1770, 1987
BstV2I GAAGAC 3 cut(s) 201, 825, 1237
BstX2I RGATCY 2 cut(s) 161, 2015
BstXI CCANNNNNNTGG 2 cut(s) 581, 1160
BstYI RGATCY 2 cut(s) 161, 2015
BsuI GTATCC 1 cut(s) 680
BsuRI GGCC 4 cut(s) 521, 636, 802, 1164
BtsCI GGATG 3 cut(s) 1113, 1374, 1566
BtsI GCAGTG 1 cut(s) 410
BtsIMutI CAGTG 4 cut(s) 410, 705, 1065, 1488
BveI ACCTGC 2 cut(s) 1222, 1651
CciI TCATGA 2 cut(s) 303, 2075
CfoI GCGC 1 cut(s) 1518
Cfr13I GGNCC 5 cut(s) 155, 430, 520, 634, 1646
CseI GACGC 1 cut(s) 52
CsiI ACCWGGT 1 cut(s) 432
Csp6I GTAC 2 cut(s) 821, 1286
CviQI GTAC 2 cut(s) 821, 1286
DdeI CTNAG 2 cut(s) 681, 1344
DpnI GATC 8 cut(s) 163, 208, 744, 1470, 1732, 1806, 1901, 2017
DpnII GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
DrdI GACNNNNNNGTC 1 cut(s) 1314
DseDI GACNNNNNNGTC 1 cut(s) 1314
EaeI YGGCCR 1 cut(s) 1162
Eam1104I CTCTTC 5 cut(s) 24, 307, 495, 1535, 1804
EarI CTCTTC 5 cut(s) 24, 307, 495, 1535, 1804
Eco130I CCWWGG 2 cut(s) 1226, 1650
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 3 cut(s) 155, 430, 1646
Eco57I CTGAAG 2 cut(s) 1559, 1785
Eco72I CACGTG 1 cut(s) 1013
EcoNI CCTNNNNNAGG 1 cut(s) 2023
EcoO109I RGGNCCY 3 cut(s) 155, 520, 1646
EcoRI GAATTC 1 cut(s) 869
EcoRII CCWGG 4 cut(s) 157, 432, 522, 1152
EcoRV GATATC 1 cut(s) 534
EcoT14I CCWWGG 2 cut(s) 1226, 1650
EcoT22I ATGCAT 1 cut(s) 1633
ErhI CCWWGG 2 cut(s) 1226, 1650
Esp3I CGTCTC 2 cut(s) 593, 1420
FalI AAGNNNNNCTT 2 cut(s) 72, 104
FauNDI CATATG 3 cut(s) 471, 1026, 1633
FbaI TGATCA 1 cut(s) 1468
FblI GTMKAC 3 cut(s) 1410, 1700, 1838
Fnu4HI GCNGC 7 cut(s) 35, 336, 625, 1559, 1784, 1976, 2045
FokI GGATG 3 cut(s) 1100, 1381, 1553
Fsp4HI GCNGC 7 cut(s) 35, 336, 625, 1559, 1784, 1976, 2045
FspBI CTAG 3 cut(s) 323, 924, 1227
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 7 cut(s) 35, 336, 625, 1559, 1784, 1976, 2045
HaeIII GGCC 4 cut(s) 521, 636, 802, 1164
HapII CCGG 2 cut(s) 1260, 1704
HgaI GACGC 1 cut(s) 52
HhaI GCGC 1 cut(s) 1518
Hin1I GRCGYC 1 cut(s) 1413
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 2 cut(s) 477, 796
HindII GTYRAC 2 cut(s) 477, 796
HindIII AAGCTT 4 cut(s) 144, 450, 1430, 1688
HpaII CCGG 2 cut(s) 1260, 1704
HphI GGTGA 1 cut(s) 448
Hpy166II GTNNAC 6 cut(s) 477, 796, 938, 1411, 1701, 1839
Hpy188I TCNGA 6 cut(s) 124, 747, 892, 1473, 1534, 1804
Hpy8I GTNNAC 6 cut(s) 477, 796, 938, 1411, 1701, 1839
Hpy99I CGWCG 2 cut(s) 1320, 1781
HpyAV CCTTC 2 cut(s) 1197, 1783
HpyCH4III ACNGT 5 cut(s) 793, 1069, 1382, 1483, 1890
HpyCH4IV ACGT 6 cut(s) 42, 1002, 1012, 1413, 1716, 1741
HpyF10VI GCNNNNNNNGC 6 cut(s) 633, 713, 1320, 1628, 1666, 1780
HpyF3I CTNAG 2 cut(s) 681, 1344
HpySE526I ACGT 6 cut(s) 42, 1002, 1012, 1413, 1716, 1741
Hsp92I GRCGYC 1 cut(s) 1413
HspAI GCGC 1 cut(s) 1516
Kpn2I TCCGGA 1 cut(s) 1259
Ksp22I TGATCA 1 cut(s) 1468
Kzo9I GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
LguI GCTCTTC 1 cut(s) 24
LmnI GCTCC 4 cut(s) 46, 762, 1035, 1534
Lsp1109I GCAGC 6 cut(s) 21, 322, 636, 1570, 1770, 1987
LweI GCATC 2 cut(s) 267, 915
MabI ACCWGGT 1 cut(s) 432
MaeI CTAG 3 cut(s) 323, 924, 1227
MaeII ACGT 6 cut(s) 42, 1002, 1012, 1413, 1716, 1741
MaeIII GTNAC 4 cut(s) 359, 1373, 1438, 1636
MalI GATC 8 cut(s) 163, 208, 744, 1470, 1732, 1806, 1901, 2017
MboI GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
MfeI CAATTG 1 cut(s) 837
MflI RGATCY 2 cut(s) 161, 2015
MluCI AATT 8 cut(s) 54, 597, 837, 869, 1490, 1503, 1601, 1876
MlyI GAGTC 5 cut(s) 316, 361, 673, 875, 1176
MmeI TCCRAC 1 cut(s) 1872
Mph1103I ATGCAT 1 cut(s) 1633
MroI TCCGGA 1 cut(s) 1259
MroXI GAANNNNTTC 3 cut(s) 873, 1020, 1602
MseI TTAA 8 cut(s) 20, 171, 294, 509, 1401, 1506, 1686, 1737
MslI CAYNNNNRTG 2 cut(s) 214, 987
MspI CCGG 2 cut(s) 1260, 1704
MspR9I CCNGG 4 cut(s) 159, 434, 524, 1154
MunI CAATTG 1 cut(s) 837
MvaI CCWGG 4 cut(s) 159, 434, 524, 1154
MwoI GCNNNNNNNGC 6 cut(s) 633, 713, 1320, 1628, 1666, 1780
NdeI CATATG 3 cut(s) 471, 1026, 1633
NdeII GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
NlaIV GGNNCC 3 cut(s) 163, 635, 1648
NmuCI GTSAC 1 cut(s) 1373
NsiI ATGCAT 1 cut(s) 1633
NspI RCATGY 1 cut(s) 1225
PagI TCATGA 2 cut(s) 303, 2075
PciSI GCTCTTC 1 cut(s) 24
PdmI GAANNNNTTC 3 cut(s) 873, 1020, 1602
PfeI GAWTC 8 cut(s) 179, 221, 424, 460, 899, 1086, 1938, 2072
PflMI CCANNNNNTGG 1 cut(s) 439
PfoI TCCNGGA 1 cut(s) 157
PkrI GCNGC 7 cut(s) 36, 337, 626, 1560, 1785, 1977, 2046
PleI GAGTC 5 cut(s) 315, 360, 673, 875, 1176
PmaCI CACGTG 1 cut(s) 1013
PmlI CACGTG 1 cut(s) 1013
PpsI GAGTC 5 cut(s) 315, 360, 673, 875, 1176
Ppu21I YACGTR 1 cut(s) 1013
PpuMI RGGWCCY 2 cut(s) 155, 1646
PshBI ATTAAT 1 cut(s) 294
Psp5II RGGWCCY 2 cut(s) 155, 1646
Psp6I CCWGG 4 cut(s) 157, 432, 522, 1152
PspCI CACGTG 1 cut(s) 1013
PspGI CCWGG 4 cut(s) 157, 432, 522, 1152
PspN4I GGNNCC 3 cut(s) 163, 635, 1648
PspPI GGNCC 5 cut(s) 155, 430, 520, 634, 1646
PspPPI RGGWCCY 2 cut(s) 155, 1646
PstI CTGCAG 2 cut(s) 340, 1269
PsuI RGATCY 2 cut(s) 161, 2015
RsaI GTAC 2 cut(s) 822, 1287
RsaNI GTAC 2 cut(s) 821, 1286
RseI CAYNNNNRTG 2 cut(s) 214, 987
SapI GCTCTTC 1 cut(s) 24
SaqAI TTAA 8 cut(s) 20, 171, 294, 509, 1401, 1506, 1686, 1737
SatI GCNGC 7 cut(s) 35, 336, 625, 1559, 1784, 1976, 2045
Sau3AI GATC 8 cut(s) 161, 206, 742, 1468, 1730, 1804, 1899, 2015
Sau96I GGNCC 5 cut(s) 155, 430, 520, 634, 1646
SchI GAGTC 5 cut(s) 316, 361, 673, 875, 1176
ScrFI CCNGG 4 cut(s) 159, 434, 524, 1154
SexAI ACCWGGT 1 cut(s) 432
SfaNI GCATC 2 cut(s) 267, 915
SfcI CTRYAG 4 cut(s) 336, 1049, 1068, 1265
SinI GGWCC 3 cut(s) 155, 430, 1646
SmiMI CAYNNNNRTG 2 cut(s) 214, 987
SmlI CTYRAG 3 cut(s) 225, 674, 1126
SmoI CTYRAG 3 cut(s) 225, 674, 1126
Sse9I AATT 8 cut(s) 54, 597, 837, 869, 1490, 1503, 1601, 1876
SsiI CCGC 3 cut(s) 1030, 1786, 2045
SspMI CTAG 3 cut(s) 323, 924, 1227
StyD4I CCNGG 4 cut(s) 157, 432, 522, 1152
StyI CCWWGG 2 cut(s) 1226, 1650
TaaI ACNGT 5 cut(s) 793, 1069, 1382, 1483, 1890
TaiI ACGT 6 cut(s) 45, 1005, 1015, 1416, 1719, 1744
TaqI TCGA 5 cut(s) 310, 646, 877, 1174, 1776
TasI AATT 8 cut(s) 54, 597, 837, 869, 1490, 1503, 1601, 1876
TauI GCSGC 1 cut(s) 2047
TfiI GAWTC 8 cut(s) 179, 221, 424, 460, 899, 1086, 1938, 2072
Tru1I TTAA 8 cut(s) 20, 171, 294, 509, 1401, 1506, 1686, 1737
Tru9I TTAA 8 cut(s) 20, 171, 294, 509, 1401, 1506, 1686, 1737
TscAI CASTG 4 cut(s) 417, 705, 1072, 1488
TseFI GTSAC 1 cut(s) 1373
TseI GCWGC 6 cut(s) 34, 335, 624, 1558, 1783, 1975
Tsp45I GTSAC 1 cut(s) 1373
TspDTI ATGAA 7 cut(s) 126, 862, 873, 1013, 1266, 1746, 1898
TspGWI ACGGA 1 cut(s) 1944
TspRI CASTG 4 cut(s) 417, 705, 1072, 1488
Van91I CCANNNNNTGG 1 cut(s) 439
VpaK11BI GGWCC 3 cut(s) 155, 430, 1646
VspI ATTAAT 1 cut(s) 294
XagI CCTNNNNNAGG 1 cut(s) 2023
XapI RAATTY 3 cut(s) 869, 1601, 1876
XbaI TCTAGA 1 cut(s) 923
XceI RCATGY 1 cut(s) 1225
XmaJI CCTAGG 1 cut(s) 1226
XmiI GTMKAC 3 cut(s) 1410, 1700, 1838
XmnI GAANNNNTTC 3 cut(s) 873, 1020, 1602
XspI CTAG 3 cut(s) 323, 924, 1227
ZraI GACGTC 1 cut(s) 1414
Zsp2I ATGCAT 1 cut(s) 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.