MD01G1052800.v1.1

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000170
Physical Location & Seq
Forward (+)
15796742 .. 15798817
2076 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1052800.v1.1.491

Sequence Viewer

Length: 894 bp
ATGGCAGAAGCAGTAAGGAGGTATGCAGTTGTGACAGGAGCTAACAAAGGGGTTGGATTTGGCACAGTTAAGCAGTTGGCTTCAAAAGGCGTCGTAGTTGTGTTAACTGCTAGGGATGAGAAGAGGGGTCTTGAAGCTCTTGAAAAACTGAAAGATTTTGGCATTTCTGATTTGGTTGTTTTTCATCAGCTTGATGTAACAGATTCTGCTAGCGCTGCTGTATTGGCGGATTTTGTGAAAACCCAATTCGGAAAACTCGATATCTTGGTAAATAATGCAGCAATTAATGGAAGTGTGGTAAACCCTGAAGCTTTTATATCAGCTGCTACTGCTAAGAAGCCTGAAGAAATAAATTGGAATGAAATACCGACTATACCAAACTACGAGTTAGCAGAAGAATGCCTGAAAACAAACTACTATGGTACAAAAAGAGTGACTGAAGCGCTTTTGCCCCTCCTCCAGCTATCAGATTCTCCCAGAATCGTCAATGTTTCTACCGGTGCTGCTAAGCTTATGAATTTTCCAAATGGATGGCCTAAAGAGGTACTGAGTGATGCAGAGACACTTACAGAAGAGAGAATAGATTCTGTGTTGAGTGGATTTTTGGAAGACTCTAAACGAGGTTTGCAAGACATCAAAATCTGGCCTCCTGTTTTTCCACCCTATACAGTCTCGAAAGCCGCCTTGAACGCGTACACTAGGATTTTGGCCAAAAAGTATCCAAATTTCTGCATCAACTGTGGCAGCCCTGGATTTGTCAAAACCGACATGAGCTTCAATGCTGGCATCTTAACCATCGACGAAGGTGCTGAAAGCATTGTCAGGTTGGCGCTACTCCCCAACGGCGGTTCTACTGGCCTCTACTTTTCTAGGAAAGAAGTGGCACCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00902 ko01110 map00902 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

298

Amino Acids

32.21

Weight (kDa)

5.7

Isoelectric Point (pI)

33.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 8 - 170 9.5e-23 short chain dehydrogenase
adh_short_C2 PF13561 13 - 110 9.3e-15 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01800 AT1G01800 AT2G24190 AT2G24190 AT3G61220 AT3G61220 AT3G61220
fragaria_vesca FvH4_7g13591 FvH4_7g13601 FvH4_7g13602 FvH4_7g13603 FvH4_7g13603 FvH4_7g13603 FvH4_7g13620
malus_domestica MD01G1052500.v1.1 MD01G1052600.v1.1 MD01G1052700.v1.1 MD01G1052800.v1.1 MD01G1053000.v1.1 MD01G1053100.v1.1 MD01G1053200.v1.1 MD01G1053300.v1.1 MD04G1099300.v1.1 MD04G1099400.v1.1 MD04G1099500.v1.1 MD07G1064800.v1.1 MD07G1142200.v1.1 MD07G1142300.v1.1
prunus_persica Prupe.1G171500_v2.0.a1 Prupe.1G171600_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160400_v2.0.a1 Prupe.2G160500_v2.0.a1 Prupe.2G160600_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160900_v2.0.a1 Prupe.2G161000_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161200_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161400_v2.0.a1 Prupe.2G161500_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161800_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G162200_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.4G240700_v2.0.a1 Prupe.4G240800_v2.0.a1
pyrus_communis pycom01g07820 pycom01g07840 pycom01g07850 pycom01g07860 pycom01g07880 pycom01g07900 pycom04g09450 pycom04g09460 pycom07g01290 pycom07g12490 pycom07g12510 pycom07g12570 pycom07g14080
rosa_chinensis RchiOBHm_Chr1g0353391 RchiOBHm_Chr1g0353401 RchiOBHm_Chr1g0353411 RchiOBHm_Chr1g0353421 RchiOBHm_Chr1g0353431 RchiOBHm_Chr1g0353481 RchiOBHm_Chr1g0353511 RchiOBHm_Chr1g0353531 RchiOBHm_Chr1g0353541 RchiOBHm_Chr1g0353571 RchiOBHm_Chr1g0353581 RchiOBHm_Chr1g0353621 RchiOBHm_Chr1g0353661 RchiOBHm_Chr7g0224711 RchiOBHm_Chr7g0224731 RchiOBHm_Chr7g0224751
rosa_laevigata RLG00000001859 RLG00000001863 RLG00000028244 RLG00000028267 RLG00000028269 RLG00000028270 RLG00000028272
rosa_multiflora Rmu_co8260681.1_g000001 Rmu_co8305447.1_g000001 Rmu_co8330951.1_g000001 Rmu_co8341853.1_g000001 Rmu_sc0000144.1_g000019 Rmu_sc0000144.1_g000020 Rmu_sc0000144.1_g000026 Rmu_sc0000687.1_g000012 Rmu_sc0000687.1_g000018 Rmu_sc0000687.1_g000019 Rmu_sc0000687.1_g000020 Rmu_sc0000687.1_g000026 Rmu_sc0001207.1_g000001 Rmu_sc0001207.1_g000012 Rmu_sc0005914.1_g000002 Rmu_sc0005914.1_g000005 Rmu_sc0005914.1_g000007 Rmu_sc0005947.1_g000025 Rmu_sc0007658.1_g000005 Rmu_sc0011028.1_g000012 Rmu_sc0011028.1_g000013 Rmu_sc0026118.1_g000001 Rmu_sc0026975.1_g000001 Rmu_sc0027167.1_g000001 Rmu_sc0042792.1_g000001
rosa_roxburghii Rroxscaffold_3G00234470 Rroxscaffold_4G00301760 Rroxscaffold_4G00301810 Rroxscaffold_4G00301820 Rroxscaffold_4G00301830 Rroxscaffold_4G00301840 Rroxscaffold_4G00301860 Rroxscaffold_4G00301870
rosa_rugosa Rorug01G0235700 Rorug01G0236300 Rorug01G0236600 Rorug01G0236800 Rorug07G0225000.1 Rorug07G0225100
rosa_samantha Rh1AG247900 Rh1AG248000 Rh1AG248400 Rh1AG248500 Rh1AG248600 Rh1AG248800 Rh1AG249000 Rh1AG249100 Rh1BG217700 Rh1BG218000 Rh1BG218400 Rh1BG218600 Rh1BG218800 Rh1BG218900 Rh1BG219200 Rh1DG244000 Rh1DG244300 Rh1DG244800 Rh1DG245000 Rh1DG245200 Rh1DG245300 Rh1DG245600 Rh1DG246200 Rh7BG361100 Rh7CG396500 Rh7CG396700 Rh7DG371200
rosa_wichuraiana Rw1G021600 Rw1G021610 Rw1G021620 Rw1G021640 Rw1G021650 Rw1G021660 Rw1G021680 Rw1G021710 Rw1G021900 Rw7G031330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 883
AccII CGCG 1 cut(s) 692
AciI CCGC 3 cut(s) 227, 681, 846
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 2 cut(s) 517, 724
AcuI CTGAAG 3 cut(s) 327, 363, 459
AcyI GRCGYC 1 cut(s) 90
AfaI GTAC 3 cut(s) 424, 546, 695
AfeI AGCGCT 2 cut(s) 214, 444
AfiI CCNNNNNNNGG 1 cut(s) 845
AflIII ACRYGT 1 cut(s) 690
AgeI ACCGGT 1 cut(s) 497
AgsI TTSAA 5 cut(s) 84, 134, 143, 688, 778
AjnI CCWGG 1 cut(s) 748
AluBI AGCT 8 cut(s) 41, 137, 190, 311, 323, 463, 511, 774
AluI AGCT 8 cut(s) 41, 137, 190, 311, 323, 463, 511, 774
Alw26I GTCTC 2 cut(s) 554, 676
AlwNI CAGNNNCTG 1 cut(s) 206
Aor51HI AGCGCT 2 cut(s) 214, 444
AoxI GGCC 4 cut(s) 533, 644, 708, 856
ApeKI GCWGC 5 cut(s) 215, 278, 323, 503, 744
ApoI RAATTY 2 cut(s) 517, 724
AseI ATTAAT 1 cut(s) 285
AsiGI ACCGGT 1 cut(s) 497
Asp700I GAANNNNTTC 1 cut(s) 583
AspLEI GCGC 3 cut(s) 215, 445, 832
AsuNHI GCTAGC 1 cut(s) 209
BalI TGGCCA 1 cut(s) 710
BanI GGYRCC 1 cut(s) 883
BbsI GAAGAC 1 cut(s) 615
BbvI GCAGC 5 cut(s) 202, 290, 310, 490, 756
BccI CCATC 2 cut(s) 525, 803
BceAI ACGGC 1 cut(s) 859
BcgI CGANNNNNNTGC 2 cut(s) 788, 822
BciT130I CCWGG 1 cut(s) 750
BciVI GTATCC 1 cut(s) 729
BcoDI GTCTC 2 cut(s) 554, 676
BfaI CTAG 4 cut(s) 111, 210, 699, 870
BfoI RGCGCY 3 cut(s) 216, 446, 833
BfuI GTATCC 1 cut(s) 729
BisI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
BlpI GCTNAGC 1 cut(s) 507
BlsI GCNGC 6 cut(s) 217, 280, 325, 505, 682, 746
Bme1390I CCNGG 1 cut(s) 750
BmiI GGNNCC 1 cut(s) 885
BmrFI CCNGG 1 cut(s) 750
BmsI GCATC 3 cut(s) 544, 741, 795
BmtI GCTAGC 1 cut(s) 213
BpiI GAAGAC 1 cut(s) 615
BpmI CTGGAG 1 cut(s) 443
Bpu1102I GCTNAGC 1 cut(s) 507
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 1 cut(s) 748
BsaWI WCCGGW 1 cut(s) 497
Bsc4I CCNNNNNNNGG 1 cut(s) 845
Bse118I RCCGGY 1 cut(s) 497
Bse1I ACTGG 1 cut(s) 859
BseBI CCWGG 1 cut(s) 750
BseDI CCNNGG 1 cut(s) 748
BseGI GGATG 2 cut(s) 121, 536
BseLI CCNNNNNNNGG 1 cut(s) 845
BseMII CTCAG 1 cut(s) 539
BseNI ACTGG 1 cut(s) 859
BseRI GAGGAG 1 cut(s) 446
BseXI GCAGC 5 cut(s) 202, 290, 310, 490, 756
Bsh1236I CGCG 1 cut(s) 692
BshFI GGCC 4 cut(s) 535, 646, 710, 858
BshNI GGYRCC 1 cut(s) 883
BshTI ACCGGT 1 cut(s) 497
BsiSI CCGG 1 cut(s) 498
BslI CCNNNNNNNGG 1 cut(s) 845
BsmAI GTCTC 2 cut(s) 554, 676
BsmI GAATGC 1 cut(s) 404
BsnI GGCC 4 cut(s) 535, 646, 710, 858
Bsp1720I GCTNAGC 1 cut(s) 507
BspACI CCGC 3 cut(s) 227, 681, 846
BspANI GGCC 4 cut(s) 535, 646, 710, 858
BspCNI CTCAG 1 cut(s) 540
BspFNI CGCG 1 cut(s) 692
BspLI GGNNCC 1 cut(s) 885
BspOI GCTAGC 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 883
BsrFI RCCGGY 1 cut(s) 497
BsrI ACTGG 1 cut(s) 859
BssAI RCCGGY 1 cut(s) 497
BssECI CCNNGG 1 cut(s) 748
BssNI GRCGYC 1 cut(s) 90
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 3 cut(s) 67, 670, 740
Bst6I CTCTTC 2 cut(s) 116, 567
BstACI GRCGYC 1 cut(s) 90
BstC8I GCNNGC 2 cut(s) 211, 784
BstDEI CTNAG 3 cut(s) 333, 507, 548
BstF5I GGATG 2 cut(s) 121, 536
BstFNI CGCG 1 cut(s) 692
BstH2I RGCGCY 3 cut(s) 216, 446, 833
BstHHI GCGC 3 cut(s) 215, 445, 832
BstMAI GTCTC 2 cut(s) 554, 676
BstMWI GCNNNNNNNGC 4 cut(s) 215, 224, 329, 689
BstNI CCWGG 1 cut(s) 750
BstSCI CCNGG 1 cut(s) 748
BstUI CGCG 1 cut(s) 692
BstV1I GCAGC 5 cut(s) 202, 290, 310, 490, 756
BstV2I GAAGAC 1 cut(s) 615
BstXI CCANNNNNNTGG 1 cut(s) 531
BsuI GTATCC 1 cut(s) 729
BsuRI GGCC 4 cut(s) 535, 646, 710, 858
BtsCI GGATG 2 cut(s) 121, 536
Cac8I GCNNGC 2 cut(s) 211, 784
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 3 cut(s) 215, 445, 832
Cfr10I RCCGGY 1 cut(s) 497
CseI GACGC 1 cut(s) 79
Csp6I GTAC 3 cut(s) 423, 545, 694
CspAI ACCGGT 1 cut(s) 497
CviAII CATG 1 cut(s) 769
CviQI GTAC 3 cut(s) 423, 545, 694
DdeI CTNAG 3 cut(s) 333, 507, 548
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 2 cut(s) 116, 567
EarI CTCTTC 2 cut(s) 116, 567
EciI GGCGGA 1 cut(s) 242
Eco32I GATATC 1 cut(s) 262
Eco47III AGCGCT 2 cut(s) 214, 444
Eco57I CTGAAG 3 cut(s) 327, 363, 459
EcoRII CCWGG 1 cut(s) 748
EcoRV GATATC 1 cut(s) 262
FaeI CATG 1 cut(s) 772
FaiI YATR 7 cut(s) 24, 317, 374, 420, 515, 666, 770
FatI CATG 1 cut(s) 768
Fnu4HI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
FokI GGATG 2 cut(s) 128, 543
Fsp4HI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
FspBI CTAG 4 cut(s) 111, 210, 699, 870
GlaI GCGC 3 cut(s) 214, 444, 831
GluI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
GsuI CTGGAG 1 cut(s) 443
HaeII RGCGCY 3 cut(s) 216, 446, 833
HaeIII GGCC 4 cut(s) 535, 646, 710, 858
HapII CCGG 1 cut(s) 498
HgaI GACGC 1 cut(s) 79
HhaI GCGC 3 cut(s) 215, 445, 832
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 1 cut(s) 772
Hin6I GCGC 3 cut(s) 213, 443, 830
HinP1I GCGC 3 cut(s) 213, 443, 830
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HindIII AAGCTT 2 cut(s) 309, 509
HinfI GANTC 5 cut(s) 203, 470, 480, 584, 611
HpaI GTTAAC 1 cut(s) 105
HpaII CCGG 1 cut(s) 498
Hpy166II GTNNAC 3 cut(s) 105, 301, 696
Hpy188I TCNGA 3 cut(s) 169, 251, 469
Hpy188III TCNNGA 3 cut(s) 131, 140, 673
Hpy8I GTNNAC 3 cut(s) 105, 301, 696
Hpy99I CGWCG 2 cut(s) 95, 803
HpyAV CCTTC 1 cut(s) 797
HpyCH4III ACNGT 3 cut(s) 67, 670, 740
HpyCH4V TGCA 5 cut(s) 26, 278, 557, 628, 732
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 224, 329, 689
HpyF3I CTNAG 3 cut(s) 333, 507, 548
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 1 cut(s) 772
HspAI GCGC 3 cut(s) 213, 443, 830
KspAI GTTAAC 1 cut(s) 105
LmnI GCTCC 1 cut(s) 38
Lsp1109I GCAGC 5 cut(s) 202, 290, 310, 490, 756
LweI GCATC 3 cut(s) 544, 741, 795
MaeI CTAG 4 cut(s) 111, 210, 699, 870
MaeIII GTNAC 3 cut(s) 31, 196, 433
MboII GAAGA 5 cut(s) 133, 356, 407, 584, 620
MlsI TGGCCA 1 cut(s) 710
MluCI AATT 5 cut(s) 245, 282, 352, 517, 724
MluI ACGCGT 1 cut(s) 690
MluNI TGGCCA 1 cut(s) 710
MlyI GAGTC 1 cut(s) 605
MmeI TCCRAC 1 cut(s) 34
MnlI CCTC 8 cut(s) 12, 117, 464, 467, 535, 614, 657, 869
Mox20I TGGCCA 1 cut(s) 710
MroXI GAANNNNTTC 1 cut(s) 583
MscI TGGCCA 1 cut(s) 710
MseI TTAA 4 cut(s) 69, 104, 285, 791
Msp20I TGGCCA 1 cut(s) 710
MspA1I CMGCKG 1 cut(s) 323
MspI CCGG 1 cut(s) 498
MspR9I CCNGG 1 cut(s) 750
Mva1269I GAATGC 1 cut(s) 404
MvaI CCWGG 1 cut(s) 750
MvnI CGCG 1 cut(s) 692
MwoI GCNNNNNNNGC 4 cut(s) 215, 224, 329, 689
NheI GCTAGC 1 cut(s) 209
NlaIII CATG 1 cut(s) 772
NlaIV GGNNCC 1 cut(s) 885
NmuCI GTSAC 2 cut(s) 31, 433
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 404
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 4 cut(s) 203, 470, 480, 584
PinAI ACCGGT 1 cut(s) 497
PkrI GCNGC 6 cut(s) 217, 280, 325, 505, 682, 746
PleI GAGTC 1 cut(s) 605
PpsI GAGTC 1 cut(s) 605
PshBI ATTAAT 1 cut(s) 285
Psp6I CCWGG 1 cut(s) 748
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 1 cut(s) 885
PstNI CAGNNNCTG 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 3 cut(s) 424, 546, 695
RsaNI GTAC 3 cut(s) 423, 545, 694
SaqAI TTAA 4 cut(s) 69, 104, 285, 791
SatI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
SchI GAGTC 1 cut(s) 605
ScrFI CCNGG 1 cut(s) 750
SfaNI GCATC 3 cut(s) 544, 741, 795
Sse9I AATT 5 cut(s) 245, 282, 352, 517, 724
SsiI CCGC 3 cut(s) 227, 681, 846
SspMI CTAG 4 cut(s) 111, 210, 699, 870
StyD4I CCNGG 1 cut(s) 748
TaaI ACNGT 3 cut(s) 67, 670, 740
TaqI TCGA 3 cut(s) 258, 674, 798
TasI AATT 5 cut(s) 245, 282, 352, 517, 724
TauI GCSGC 1 cut(s) 683
TfiI GAWTC 4 cut(s) 203, 470, 480, 584
Tru1I TTAA 4 cut(s) 69, 104, 285, 791
Tru9I TTAA 4 cut(s) 69, 104, 285, 791
TseFI GTSAC 2 cut(s) 31, 433
TseI GCWGC 5 cut(s) 215, 278, 323, 503, 744
Tsp45I GTSAC 2 cut(s) 31, 433
TspDTI ATGAA 3 cut(s) 173, 375, 530
VspI ATTAAT 1 cut(s) 285
XapI RAATTY 2 cut(s) 517, 724
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 4 cut(s) 111, 210, 699, 870
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.