pycom01g07860

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
OG0000170
Physical Location & Seq
Forward (+)
8838268 .. 8840053
1786 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07860.3

Sequence Viewer

Length: 894 bp
ATGGCAGAAGCAGTAAAGAGGTATGCAGTTGTGACAGGAGCTAACAAAGGGGTTGGATTTGGCACAGTTAAGCAGTTGGCTTCAAAAGGAGTCGTAGTTGTGTTGACTGCTAGAGATGAGAAGAGGGGTCTTGAAGCTCTTGAAAAACTGAAAGATTTTGGCATTTCTGATCTCGTTGTCTTTCATCAGCTTGATGTAACAGATTCTGCTAGCGCTGCTGTATTGGCGGATTTTGTGAAAACCCAATTCGGAAAACTCGATATCTTGGTAAATAACGCAGCAATTAATGGAAGCATAGTAAACCCTGAAGCTTTTATGTCAGCTGCTACTGGTAAGAAGCTTGAAGAAATAAATTGGAATGAAATACCGATTATACCAAACTACGAGTTACCAGAAGAATGCCTGAAAACAAACTACTATGGTACAAAAAGAGTGACTGAAGCTCTTTTGCCCCTCCTTCAGCTATCAGATTCCCCCAGAATCGTCAATGTTTCTACCGGTGCTGCTAACCTAGTGAATTTTCCAAATGGATGGCCTAAAGAGGTACTGAGTGATGCAGAGACACTTACAGAAGAGAGAATAGATTCTGTGTTGAGTGGATTTTTGGAAGACTCTAAACAAGGTTTGCAAGACACCAAAATCTGGCCTCCTTTTTTTCCACCCTATAGTGTCTCAAAAGCAGCCTTGAACGCGTACACTAGGATTTTGGCCAAAAAGTATCCAAATTTCTGCATCAACTGTGGCAGCCCTGGATTTGTCAAAACTGACATGAGCTTCAATGCTGGCATCTTAACCATCGACGAAGGTGCTGAAAGCATTGTCAGGTTGGCGTTACTCCCCAACGGCAGTTCTACTGGCCTCTACTTTTCTCGGAAAGAAGTGGCACCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00902 ko01110 map00902 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

298

Amino Acids

32.23

Weight (kDa)

5.31

Isoelectric Point (pI)

34.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01800 AT1G01800 AT2G24190 AT2G24190 AT3G61220 AT3G61220 AT3G61220
fragaria_vesca FvH4_7g13591 FvH4_7g13601 FvH4_7g13602 FvH4_7g13603 FvH4_7g13603 FvH4_7g13603 FvH4_7g13620
malus_domestica MD01G1052500.v1.1 MD01G1052600.v1.1 MD01G1052700.v1.1 MD01G1052800.v1.1 MD01G1053000.v1.1 MD01G1053100.v1.1 MD01G1053200.v1.1 MD01G1053300.v1.1 MD04G1099300.v1.1 MD04G1099400.v1.1 MD04G1099500.v1.1 MD07G1064800.v1.1 MD07G1142200.v1.1 MD07G1142300.v1.1
prunus_persica Prupe.1G171500_v2.0.a1 Prupe.1G171600_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160400_v2.0.a1 Prupe.2G160500_v2.0.a1 Prupe.2G160600_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160900_v2.0.a1 Prupe.2G161000_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161200_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161400_v2.0.a1 Prupe.2G161500_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161800_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G162200_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.4G240700_v2.0.a1 Prupe.4G240800_v2.0.a1
pyrus_communis pycom01g07820 pycom01g07840 pycom01g07850 pycom01g07860 pycom01g07880 pycom01g07900 pycom04g09450 pycom04g09460 pycom07g01290 pycom07g12490 pycom07g12510 pycom07g12570 pycom07g14080
rosa_chinensis RchiOBHm_Chr1g0353391 RchiOBHm_Chr1g0353401 RchiOBHm_Chr1g0353411 RchiOBHm_Chr1g0353421 RchiOBHm_Chr1g0353431 RchiOBHm_Chr1g0353481 RchiOBHm_Chr1g0353511 RchiOBHm_Chr1g0353531 RchiOBHm_Chr1g0353541 RchiOBHm_Chr1g0353571 RchiOBHm_Chr1g0353581 RchiOBHm_Chr1g0353621 RchiOBHm_Chr1g0353661 RchiOBHm_Chr7g0224711 RchiOBHm_Chr7g0224731 RchiOBHm_Chr7g0224751
rosa_laevigata RLG00000001859 RLG00000001863 RLG00000028244 RLG00000028267 RLG00000028269 RLG00000028270 RLG00000028272
rosa_multiflora Rmu_co8260681.1_g000001 Rmu_co8305447.1_g000001 Rmu_co8330951.1_g000001 Rmu_co8341853.1_g000001 Rmu_sc0000144.1_g000019 Rmu_sc0000144.1_g000020 Rmu_sc0000144.1_g000026 Rmu_sc0000687.1_g000012 Rmu_sc0000687.1_g000018 Rmu_sc0000687.1_g000019 Rmu_sc0000687.1_g000020 Rmu_sc0000687.1_g000026 Rmu_sc0001207.1_g000001 Rmu_sc0001207.1_g000012 Rmu_sc0005914.1_g000002 Rmu_sc0005914.1_g000005 Rmu_sc0005914.1_g000007 Rmu_sc0005947.1_g000025 Rmu_sc0007658.1_g000005 Rmu_sc0011028.1_g000012 Rmu_sc0011028.1_g000013 Rmu_sc0026118.1_g000001 Rmu_sc0026975.1_g000001 Rmu_sc0027167.1_g000001 Rmu_sc0042792.1_g000001
rosa_roxburghii Rroxscaffold_3G00234470 Rroxscaffold_4G00301760 Rroxscaffold_4G00301810 Rroxscaffold_4G00301820 Rroxscaffold_4G00301830 Rroxscaffold_4G00301840 Rroxscaffold_4G00301860 Rroxscaffold_4G00301870
rosa_rugosa Rorug01G0235700 Rorug01G0236300 Rorug01G0236600 Rorug01G0236800 Rorug07G0225000.1 Rorug07G0225100
rosa_samantha Rh1AG247900 Rh1AG248000 Rh1AG248400 Rh1AG248500 Rh1AG248600 Rh1AG248800 Rh1AG249000 Rh1AG249100 Rh1BG217700 Rh1BG218000 Rh1BG218400 Rh1BG218600 Rh1BG218800 Rh1BG218900 Rh1BG219200 Rh1DG244000 Rh1DG244300 Rh1DG244800 Rh1DG245000 Rh1DG245200 Rh1DG245300 Rh1DG245600 Rh1DG246200 Rh7BG361100 Rh7CG396500 Rh7CG396700 Rh7DG371200
rosa_wichuraiana Rw1G021600 Rw1G021610 Rw1G021620 Rw1G021640 Rw1G021650 Rw1G021660 Rw1G021680 Rw1G021710 Rw1G021900 Rw7G031330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 883
AccB7I CCANNNNNTGG 1 cut(s) 642
AccII CGCG 1 cut(s) 692
AciI CCGC 1 cut(s) 227
AcoI YGGCCR 1 cut(s) 708
AcsI RAATTY 2 cut(s) 517, 724
AcuI CTGAAG 3 cut(s) 327, 443, 459
AfaI GTAC 3 cut(s) 424, 546, 695
AfeI AGCGCT 1 cut(s) 214
AfiI CCNNNNNNNGG 1 cut(s) 642
AflIII ACRYGT 1 cut(s) 690
AgeI ACCGGT 1 cut(s) 497
AgsI TTSAA 6 cut(s) 84, 134, 143, 344, 688, 778
AjnI CCWGG 1 cut(s) 748
AluBI AGCT 9 cut(s) 41, 137, 190, 311, 323, 340, 443, 463, 774
AluI AGCT 9 cut(s) 41, 137, 190, 311, 323, 340, 443, 463, 774
Alw26I GTCTC 2 cut(s) 554, 676
AlwNI CAGNNNCTG 1 cut(s) 206
Aor51HI AGCGCT 1 cut(s) 214
AoxI GGCC 4 cut(s) 533, 644, 708, 856
ApeKI GCWGC 6 cut(s) 215, 278, 323, 503, 680, 744
ApoI RAATTY 2 cut(s) 517, 724
AseI ATTAAT 1 cut(s) 285
AsiGI ACCGGT 1 cut(s) 497
Asp700I GAANNNNTTC 1 cut(s) 583
AspLEI GCGC 1 cut(s) 215
AsuNHI GCTAGC 1 cut(s) 209
BalI TGGCCA 1 cut(s) 710
BanI GGYRCC 1 cut(s) 883
BbsI GAAGAC 1 cut(s) 615
BbvI GCAGC 6 cut(s) 202, 290, 310, 490, 692, 756
BccI CCATC 2 cut(s) 525, 803
BceAI ACGGC 1 cut(s) 859
BcgI CGANNNNNNTGC 2 cut(s) 788, 822
BciT130I CCWGG 1 cut(s) 750
BciVI GTATCC 1 cut(s) 729
BcoDI GTCTC 2 cut(s) 554, 676
BfaI CTAG 4 cut(s) 111, 210, 512, 699
BfmI CTRYAG 1 cut(s) 664
BfoI RGCGCY 1 cut(s) 216
BfuI GTATCC 1 cut(s) 729
BisI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
BlsI GCNGC 6 cut(s) 217, 280, 325, 505, 682, 746
Bme1390I CCNGG 1 cut(s) 750
BmiI GGNNCC 1 cut(s) 885
BmrFI CCNGG 1 cut(s) 750
BmsI GCATC 3 cut(s) 544, 741, 795
BmtI GCTAGC 1 cut(s) 213
BpiI GAAGAC 1 cut(s) 615
BsaJI CCNNGG 1 cut(s) 748
BsaWI WCCGGW 1 cut(s) 497
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 1 cut(s) 642
Bse118I RCCGGY 1 cut(s) 497
Bse1I ACTGG 2 cut(s) 334, 859
BseBI CCWGG 1 cut(s) 750
BseDI CCNNGG 1 cut(s) 748
BseGI GGATG 1 cut(s) 536
BseLI CCNNNNNNNGG 1 cut(s) 642
BseMII CTCAG 1 cut(s) 539
BseNI ACTGG 2 cut(s) 334, 859
BseXI GCAGC 6 cut(s) 202, 290, 310, 490, 692, 756
Bsh1236I CGCG 1 cut(s) 692
BshFI GGCC 4 cut(s) 535, 646, 710, 858
BshNI GGYRCC 1 cut(s) 883
BshTI ACCGGT 1 cut(s) 497
BsiSI CCGG 1 cut(s) 498
BslI CCNNNNNNNGG 1 cut(s) 642
BsmAI GTCTC 2 cut(s) 554, 676
BsmI GAATGC 1 cut(s) 404
BsnI GGCC 4 cut(s) 535, 646, 710, 858
Bsp143I GATC 1 cut(s) 169
BspACI CCGC 1 cut(s) 227
BspANI GGCC 4 cut(s) 535, 646, 710, 858
BspCNI CTCAG 1 cut(s) 540
BspFNI CGCG 1 cut(s) 692
BspLI GGNNCC 1 cut(s) 885
BspOI GCTAGC 1 cut(s) 213
BspT107I GGYRCC 1 cut(s) 883
BsrFI RCCGGY 1 cut(s) 497
BsrI ACTGG 2 cut(s) 334, 859
BssAI RCCGGY 1 cut(s) 497
BssECI CCNNGG 1 cut(s) 748
BssMI GATC 1 cut(s) 169
Bst2UI CCWGG 1 cut(s) 750
Bst4CI ACNGT 2 cut(s) 67, 740
Bst6I CTCTTC 2 cut(s) 116, 567
BstC8I GCNNGC 2 cut(s) 211, 784
BstDEI CTNAG 1 cut(s) 548
BstF5I GGATG 1 cut(s) 536
BstFNI CGCG 1 cut(s) 692
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 1 cut(s) 172
BstMAI GTCTC 2 cut(s) 554, 676
BstMBI GATC 1 cut(s) 169
BstMWI GCNNNNNNNGC 3 cut(s) 215, 224, 689
BstNI CCWGG 1 cut(s) 750
BstSCI CCNGG 1 cut(s) 748
BstSFI CTRYAG 1 cut(s) 664
BstUI CGCG 1 cut(s) 692
BstV1I GCAGC 6 cut(s) 202, 290, 310, 490, 692, 756
BstV2I GAAGAC 1 cut(s) 615
BstXI CCANNNNNNTGG 1 cut(s) 531
BsuI GTATCC 1 cut(s) 729
BsuRI GGCC 4 cut(s) 535, 646, 710, 858
BtsCI GGATG 1 cut(s) 536
Cac8I GCNNGC 2 cut(s) 211, 784
CaiI CAGNNNCTG 1 cut(s) 206
CfoI GCGC 1 cut(s) 215
Cfr10I RCCGGY 1 cut(s) 497
Csp6I GTAC 3 cut(s) 423, 545, 694
CspAI ACCGGT 1 cut(s) 497
CviAII CATG 1 cut(s) 769
CviQI GTAC 3 cut(s) 423, 545, 694
DdeI CTNAG 1 cut(s) 548
DpnI GATC 1 cut(s) 171
DpnII GATC 1 cut(s) 169
EaeI YGGCCR 1 cut(s) 708
Eam1104I CTCTTC 2 cut(s) 116, 567
EarI CTCTTC 2 cut(s) 116, 567
EciI GGCGGA 1 cut(s) 242
Eco32I GATATC 1 cut(s) 262
Eco47III AGCGCT 1 cut(s) 214
Eco57I CTGAAG 3 cut(s) 327, 443, 459
EcoRII CCWGG 1 cut(s) 748
EcoRV GATATC 1 cut(s) 262
FaeI CATG 1 cut(s) 772
FaiI YATR 7 cut(s) 24, 296, 317, 374, 420, 666, 770
FatI CATG 1 cut(s) 768
Fnu4HI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
FokI GGATG 1 cut(s) 543
Fsp4HI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
FspBI CTAG 4 cut(s) 111, 210, 512, 699
GlaI GCGC 1 cut(s) 214
GluI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 4 cut(s) 535, 646, 710, 858
HapII CCGG 1 cut(s) 498
HhaI GCGC 1 cut(s) 215
Hin1II CATG 1 cut(s) 772
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 105
HindII GTYRAC 1 cut(s) 105
HindIII AAGCTT 2 cut(s) 309, 338
HinfI GANTC 6 cut(s) 90, 203, 470, 480, 584, 611
HpaII CCGG 1 cut(s) 498
Hpy166II GTNNAC 3 cut(s) 105, 301, 696
Hpy188I TCNGA 4 cut(s) 169, 251, 469, 873
Hpy188III TCNNGA 2 cut(s) 131, 140
Hpy8I GTNNAC 3 cut(s) 105, 301, 696
Hpy99I CGWCG 1 cut(s) 803
HpyAV CCTTC 2 cut(s) 467, 797
HpyCH4III ACNGT 2 cut(s) 67, 740
HpyCH4V TGCA 4 cut(s) 26, 557, 628, 732
HpyF10VI GCNNNNNNNGC 3 cut(s) 215, 224, 689
HpyF3I CTNAG 1 cut(s) 548
Hsp92II CATG 1 cut(s) 772
HspAI GCGC 1 cut(s) 213
Kzo9I GATC 1 cut(s) 169
LmnI GCTCC 1 cut(s) 38
Lsp1109I GCAGC 6 cut(s) 202, 290, 310, 490, 692, 756
LweI GCATC 3 cut(s) 544, 741, 795
MaeI CTAG 4 cut(s) 111, 210, 512, 699
MaeIII GTNAC 5 cut(s) 31, 196, 387, 433, 831
MalI GATC 1 cut(s) 171
MboI GATC 1 cut(s) 169
MboII GAAGA 5 cut(s) 133, 356, 407, 584, 620
MlsI TGGCCA 1 cut(s) 710
MluCI AATT 5 cut(s) 245, 282, 352, 517, 724
MluI ACGCGT 1 cut(s) 690
MluNI TGGCCA 1 cut(s) 710
MlyI GAGTC 2 cut(s) 99, 605
MmeI TCCRAC 1 cut(s) 34
MnlI CCTC 6 cut(s) 12, 117, 464, 535, 657, 869
Mox20I TGGCCA 1 cut(s) 710
MroXI GAANNNNTTC 1 cut(s) 583
MscI TGGCCA 1 cut(s) 710
MseI TTAA 3 cut(s) 69, 285, 791
Msp20I TGGCCA 1 cut(s) 710
MspA1I CMGCKG 1 cut(s) 323
MspI CCGG 1 cut(s) 498
MspR9I CCNGG 1 cut(s) 750
Mva1269I GAATGC 1 cut(s) 404
MvaI CCWGG 1 cut(s) 750
MvnI CGCG 1 cut(s) 692
MwoI GCNNNNNNNGC 3 cut(s) 215, 224, 689
NdeII GATC 1 cut(s) 169
NheI GCTAGC 1 cut(s) 209
NlaIII CATG 1 cut(s) 772
NlaIV GGNNCC 1 cut(s) 885
NmuCI GTSAC 2 cut(s) 31, 433
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 404
PdmI GAANNNNTTC 1 cut(s) 583
PfeI GAWTC 4 cut(s) 203, 470, 480, 584
PflMI CCANNNNNTGG 1 cut(s) 642
PinAI ACCGGT 1 cut(s) 497
PkrI GCNGC 6 cut(s) 217, 280, 325, 505, 682, 746
PleI GAGTC 2 cut(s) 98, 605
PpsI GAGTC 2 cut(s) 98, 605
PshBI ATTAAT 1 cut(s) 285
Psp6I CCWGG 1 cut(s) 748
PspGI CCWGG 1 cut(s) 748
PspN4I GGNNCC 1 cut(s) 885
PstNI CAGNNNCTG 1 cut(s) 206
PvuII CAGCTG 1 cut(s) 323
RsaI GTAC 3 cut(s) 424, 546, 695
RsaNI GTAC 3 cut(s) 423, 545, 694
SaqAI TTAA 3 cut(s) 69, 285, 791
SatI GCNGC 6 cut(s) 216, 279, 324, 504, 681, 745
Sau3AI GATC 1 cut(s) 169
SchI GAGTC 2 cut(s) 99, 605
ScrFI CCNGG 1 cut(s) 750
SfaNI GCATC 3 cut(s) 544, 741, 795
SfcI CTRYAG 1 cut(s) 664
Sse9I AATT 5 cut(s) 245, 282, 352, 517, 724
SsiI CCGC 1 cut(s) 227
SspMI CTAG 4 cut(s) 111, 210, 512, 699
StyD4I CCNGG 1 cut(s) 748
TaaI ACNGT 2 cut(s) 67, 740
TaqI TCGA 2 cut(s) 258, 798
TasI AATT 5 cut(s) 245, 282, 352, 517, 724
TfiI GAWTC 4 cut(s) 203, 470, 480, 584
Tru1I TTAA 3 cut(s) 69, 285, 791
Tru9I TTAA 3 cut(s) 69, 285, 791
TseFI GTSAC 2 cut(s) 31, 433
TseI GCWGC 6 cut(s) 215, 278, 323, 503, 680, 744
Tsp45I GTSAC 2 cut(s) 31, 433
TspDTI ATGAA 2 cut(s) 173, 375
Van91I CCANNNNNTGG 1 cut(s) 642
VspI ATTAAT 1 cut(s) 285
XapI RAATTY 2 cut(s) 517, 724
XmnI GAANNNNTTC 1 cut(s) 583
XspI CTAG 4 cut(s) 111, 210, 512, 699
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.