MD01G1053000.v1.1

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000170
Physical Location & Seq
Forward (+)
15803783 .. 15805472
1690 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1053000.v1.1.491

Sequence Viewer

Length: 666 bp
ATGAGAAGAGGGCTTGATGTAACAGATTCTGCTAGCGCTGCTGTATTGGCGGATTTTGTGAAAACCCAATTCGGAAAACTCGATATCTTGGTAAATAACGCAGCAATTAATGGAAGCATAATAAACCCTGAAGCTTTTATATCAGCTGCTACTGCTAAGTTAGCAGAAGAATGCCTGAAAACAAACTACTATGGTACAAAAAGAGTGACTGAAGCGCTTTTGCCCCTCCTCCAGCTATCGGATTCTCCAAGAATCATCAATGTTTCTACCGGTGCTGCTAAGCTAATGAATTTTCCAAATGGATGGCCTAAAGAGGTACTGAGTGATGCAGAGACACTTACAGAAGAGAGAATAGATTCTGTGTTGAATGGATTTTTGGAAGACTCTAAACAAGGTTTGCAAGACACCAAAATCTGGCCTCCTGTTTTTCCACCCTATACAGTCTCGAAAGCAGCCTTGAACGCGTACACTAGGATTTTGGCCAAAAAGTATCCAAATTTCTGCATCAACTGTGGCAGCCCTGGATTTGTCAAAACCGACATGAGCTTCGATGCTGGCATCTTAACCATCGACGAAGGTGCTGAAAGCATTGTCAGGTTGGCGTTACTCCCCAACGGCAGTTCTACTGGCCTCTACTTTTCTCCGAAAGAAGTGGCACCTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00902 ko01110 map00902 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

222

Amino Acids

23.88

Weight (kDa)

5.13

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 5 - 94 6.9e-13 short chain dehydrogenase
adh_short_C2 PF13561 5 - 94 1.1e-10 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01800 AT1G01800 AT2G24190 AT2G24190 AT3G61220 AT3G61220 AT3G61220
fragaria_vesca FvH4_7g13591 FvH4_7g13601 FvH4_7g13602 FvH4_7g13603 FvH4_7g13603 FvH4_7g13603 FvH4_7g13620
malus_domestica MD01G1052500.v1.1 MD01G1052600.v1.1 MD01G1052700.v1.1 MD01G1052800.v1.1 MD01G1053000.v1.1 MD01G1053100.v1.1 MD01G1053200.v1.1 MD01G1053300.v1.1 MD04G1099300.v1.1 MD04G1099400.v1.1 MD04G1099500.v1.1 MD07G1064800.v1.1 MD07G1142200.v1.1 MD07G1142300.v1.1
prunus_persica Prupe.1G171500_v2.0.a1 Prupe.1G171600_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160400_v2.0.a1 Prupe.2G160500_v2.0.a1 Prupe.2G160600_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160900_v2.0.a1 Prupe.2G161000_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161200_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161400_v2.0.a1 Prupe.2G161500_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161800_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G162200_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.4G240700_v2.0.a1 Prupe.4G240800_v2.0.a1
pyrus_communis pycom01g07820 pycom01g07840 pycom01g07850 pycom01g07860 pycom01g07880 pycom01g07900 pycom04g09450 pycom04g09460 pycom07g01290 pycom07g12490 pycom07g12510 pycom07g12570 pycom07g14080
rosa_chinensis RchiOBHm_Chr1g0353391 RchiOBHm_Chr1g0353401 RchiOBHm_Chr1g0353411 RchiOBHm_Chr1g0353421 RchiOBHm_Chr1g0353431 RchiOBHm_Chr1g0353481 RchiOBHm_Chr1g0353511 RchiOBHm_Chr1g0353531 RchiOBHm_Chr1g0353541 RchiOBHm_Chr1g0353571 RchiOBHm_Chr1g0353581 RchiOBHm_Chr1g0353621 RchiOBHm_Chr1g0353661 RchiOBHm_Chr7g0224711 RchiOBHm_Chr7g0224731 RchiOBHm_Chr7g0224751
rosa_laevigata RLG00000001859 RLG00000001863 RLG00000028244 RLG00000028267 RLG00000028269 RLG00000028270 RLG00000028272
rosa_multiflora Rmu_co8260681.1_g000001 Rmu_co8305447.1_g000001 Rmu_co8330951.1_g000001 Rmu_co8341853.1_g000001 Rmu_sc0000144.1_g000019 Rmu_sc0000144.1_g000020 Rmu_sc0000144.1_g000026 Rmu_sc0000687.1_g000012 Rmu_sc0000687.1_g000018 Rmu_sc0000687.1_g000019 Rmu_sc0000687.1_g000020 Rmu_sc0000687.1_g000026 Rmu_sc0001207.1_g000001 Rmu_sc0001207.1_g000012 Rmu_sc0005914.1_g000002 Rmu_sc0005914.1_g000005 Rmu_sc0005914.1_g000007 Rmu_sc0005947.1_g000025 Rmu_sc0007658.1_g000005 Rmu_sc0011028.1_g000012 Rmu_sc0011028.1_g000013 Rmu_sc0026118.1_g000001 Rmu_sc0026975.1_g000001 Rmu_sc0027167.1_g000001 Rmu_sc0042792.1_g000001
rosa_roxburghii Rroxscaffold_3G00234470 Rroxscaffold_4G00301760 Rroxscaffold_4G00301810 Rroxscaffold_4G00301820 Rroxscaffold_4G00301830 Rroxscaffold_4G00301840 Rroxscaffold_4G00301860 Rroxscaffold_4G00301870
rosa_rugosa Rorug01G0235700 Rorug01G0236300 Rorug01G0236600 Rorug01G0236800 Rorug07G0225000.1 Rorug07G0225100
rosa_samantha Rh1AG247900 Rh1AG248000 Rh1AG248400 Rh1AG248500 Rh1AG248600 Rh1AG248800 Rh1AG249000 Rh1AG249100 Rh1BG217700 Rh1BG218000 Rh1BG218400 Rh1BG218600 Rh1BG218800 Rh1BG218900 Rh1BG219200 Rh1DG244000 Rh1DG244300 Rh1DG244800 Rh1DG245000 Rh1DG245200 Rh1DG245300 Rh1DG245600 Rh1DG246200 Rh7BG361100 Rh7CG396500 Rh7CG396700 Rh7DG371200
rosa_wichuraiana Rw1G021600 Rw1G021610 Rw1G021620 Rw1G021640 Rw1G021650 Rw1G021660 Rw1G021680 Rw1G021710 Rw1G021900 Rw7G031330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 655
AccB7I CCANNNNNTGG 1 cut(s) 414
AccII CGCG 1 cut(s) 464
AciI CCGC 1 cut(s) 50
AcoI YGGCCR 1 cut(s) 480
AcsI RAATTY 2 cut(s) 289, 496
AcuI CTGAAG 2 cut(s) 150, 231
AfaI GTAC 3 cut(s) 196, 318, 467
AfeI AGCGCT 2 cut(s) 37, 216
AfiI CCNNNNNNNGG 2 cut(s) 238, 414
AflIII ACRYGT 1 cut(s) 462
AgeI ACCGGT 1 cut(s) 269
AgsI TTSAA 2 cut(s) 367, 460
AjnI CCWGG 1 cut(s) 520
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
AluBI AGCT 5 cut(s) 134, 146, 235, 283, 546
AluI AGCT 5 cut(s) 134, 146, 235, 283, 546
Alw26I GTCTC 2 cut(s) 326, 448
AlwNI CAGNNNCTG 1 cut(s) 29
Aor51HI AGCGCT 2 cut(s) 37, 216
AoxI GGCC 4 cut(s) 305, 416, 480, 628
ApeKI GCWGC 6 cut(s) 38, 101, 146, 275, 452, 516
ApoI RAATTY 2 cut(s) 289, 496
ArsI GACNNNNNNTTYG 2 cut(s) 530, 562
AseI ATTAAT 1 cut(s) 108
AsiGI ACCGGT 1 cut(s) 269
Asp700I GAANNNNTTC 1 cut(s) 355
AspLEI GCGC 2 cut(s) 38, 217
AsuNHI GCTAGC 1 cut(s) 32
BalI TGGCCA 1 cut(s) 482
BanI GGYRCC 1 cut(s) 655
BbsI GAAGAC 1 cut(s) 387
BbvI GCAGC 6 cut(s) 25, 113, 133, 262, 464, 528
BccI CCATC 2 cut(s) 297, 575
BceAI ACGGC 1 cut(s) 631
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 1 cut(s) 522
BciVI GTATCC 1 cut(s) 501
BcoDI GTCTC 2 cut(s) 326, 448
BfaI CTAG 2 cut(s) 33, 471
BfoI RGCGCY 2 cut(s) 39, 218
BfuI GTATCC 1 cut(s) 501
BisI GCNGC 6 cut(s) 39, 102, 147, 276, 453, 517
BlpI GCTNAGC 1 cut(s) 279
BlsI GCNGC 6 cut(s) 40, 103, 148, 277, 454, 518
Bme1390I CCNGG 1 cut(s) 522
BmiI GGNNCC 1 cut(s) 657
BmrFI CCNGG 1 cut(s) 522
BmsI GCATC 4 cut(s) 316, 513, 541, 567
BmtI GCTAGC 1 cut(s) 36
BpiI GAAGAC 1 cut(s) 387
BpmI CTGGAG 1 cut(s) 215
Bpu1102I GCTNAGC 1 cut(s) 279
BsaJI CCNNGG 1 cut(s) 520
BsaWI WCCGGW 1 cut(s) 269
Bsc4I CCNNNNNNNGG 2 cut(s) 238, 414
Bse118I RCCGGY 1 cut(s) 269
Bse1I ACTGG 1 cut(s) 631
BseBI CCWGG 1 cut(s) 522
BseDI CCNNGG 1 cut(s) 520
BseGI GGATG 1 cut(s) 308
BseLI CCNNNNNNNGG 2 cut(s) 238, 414
BseMII CTCAG 1 cut(s) 311
BseNI ACTGG 1 cut(s) 631
BseRI GAGGAG 1 cut(s) 218
BseXI GCAGC 6 cut(s) 25, 113, 133, 262, 464, 528
Bsh1236I CGCG 1 cut(s) 464
BshFI GGCC 4 cut(s) 307, 418, 482, 630
BshNI GGYRCC 1 cut(s) 655
BshTI ACCGGT 1 cut(s) 269
BsiSI CCGG 1 cut(s) 270
BslI CCNNNNNNNGG 2 cut(s) 238, 414
BsmAI GTCTC 2 cut(s) 326, 448
BsmI GAATGC 1 cut(s) 176
BsnI GGCC 4 cut(s) 307, 418, 482, 630
Bsp1720I GCTNAGC 1 cut(s) 279
BspACI CCGC 1 cut(s) 50
BspANI GGCC 4 cut(s) 307, 418, 482, 630
BspCNI CTCAG 1 cut(s) 312
BspFNI CGCG 1 cut(s) 464
BspLI GGNNCC 1 cut(s) 657
BspOI GCTAGC 1 cut(s) 36
BspT107I GGYRCC 1 cut(s) 655
BsrFI RCCGGY 1 cut(s) 269
BsrI ACTGG 1 cut(s) 631
BssAI RCCGGY 1 cut(s) 269
BssECI CCNNGG 1 cut(s) 520
Bst2UI CCWGG 1 cut(s) 522
Bst4CI ACNGT 2 cut(s) 442, 512
Bst6I CTCTTC 1 cut(s) 339
BstC8I GCNNGC 2 cut(s) 34, 556
BstDEI CTNAG 3 cut(s) 156, 279, 320
BstF5I GGATG 1 cut(s) 308
BstFNI CGCG 1 cut(s) 464
BstH2I RGCGCY 2 cut(s) 39, 218
BstHHI GCGC 2 cut(s) 38, 217
BstMAI GTCTC 2 cut(s) 326, 448
BstMWI GCNNNNNNNGC 5 cut(s) 38, 47, 152, 161, 461
BstNI CCWGG 1 cut(s) 522
BstSCI CCNGG 1 cut(s) 520
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 6 cut(s) 25, 113, 133, 262, 464, 528
BstV2I GAAGAC 1 cut(s) 387
BstXI CCANNNNNNTGG 1 cut(s) 303
BsuI GTATCC 1 cut(s) 501
BsuRI GGCC 4 cut(s) 307, 418, 482, 630
BtsCI GGATG 1 cut(s) 308
Cac8I GCNNGC 2 cut(s) 34, 556
CaiI CAGNNNCTG 1 cut(s) 29
CfoI GCGC 2 cut(s) 38, 217
Cfr10I RCCGGY 1 cut(s) 269
Csp6I GTAC 3 cut(s) 195, 317, 466
CspAI ACCGGT 1 cut(s) 269
CviAII CATG 1 cut(s) 541
CviQI GTAC 3 cut(s) 195, 317, 466
DdeI CTNAG 3 cut(s) 156, 279, 320
EaeI YGGCCR 1 cut(s) 480
Eam1104I CTCTTC 1 cut(s) 339
EarI CTCTTC 1 cut(s) 339
EciI GGCGGA 1 cut(s) 65
Eco32I GATATC 1 cut(s) 85
Eco47III AGCGCT 2 cut(s) 37, 216
Eco57I CTGAAG 2 cut(s) 150, 231
EcoRII CCWGG 1 cut(s) 520
EcoRV GATATC 1 cut(s) 85
FaeI CATG 1 cut(s) 544
FaiI YATR 5 cut(s) 119, 140, 192, 438, 542
FatI CATG 1 cut(s) 540
Fnu4HI GCNGC 6 cut(s) 39, 102, 147, 276, 453, 517
FokI GGATG 1 cut(s) 315
Fsp4HI GCNGC 6 cut(s) 39, 102, 147, 276, 453, 517
FspBI CTAG 2 cut(s) 33, 471
GlaI GCGC 2 cut(s) 37, 216
GluI GCNGC 6 cut(s) 39, 102, 147, 276, 453, 517
GsuI CTGGAG 1 cut(s) 215
HaeII RGCGCY 2 cut(s) 39, 218
HaeIII GGCC 4 cut(s) 307, 418, 482, 630
HapII CCGG 1 cut(s) 270
HhaI GCGC 2 cut(s) 38, 217
Hin1II CATG 1 cut(s) 544
Hin6I GCGC 2 cut(s) 36, 215
HinP1I GCGC 2 cut(s) 36, 215
HindIII AAGCTT 1 cut(s) 132
HinfI GANTC 5 cut(s) 26, 242, 252, 356, 383
HpaII CCGG 1 cut(s) 270
Hpy166II GTNNAC 1 cut(s) 468
Hpy188I TCNGA 3 cut(s) 74, 241, 645
Hpy188III TCNNGA 1 cut(s) 445
Hpy8I GTNNAC 1 cut(s) 468
Hpy99I CGWCG 1 cut(s) 575
HpyAV CCTTC 1 cut(s) 569
HpyCH4III ACNGT 2 cut(s) 442, 512
HpyCH4V TGCA 3 cut(s) 329, 400, 504
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 47, 152, 161, 461
HpyF3I CTNAG 3 cut(s) 156, 279, 320
Hsp92II CATG 1 cut(s) 544
HspAI GCGC 2 cut(s) 36, 215
Lsp1109I GCAGC 6 cut(s) 25, 113, 133, 262, 464, 528
LweI GCATC 4 cut(s) 316, 513, 541, 567
MaeI CTAG 2 cut(s) 33, 471
MaeIII GTNAC 3 cut(s) 19, 205, 603
MboII GAAGA 4 cut(s) 18, 179, 356, 392
MlsI TGGCCA 1 cut(s) 482
MluCI AATT 4 cut(s) 68, 105, 289, 496
MluI ACGCGT 1 cut(s) 462
MluNI TGGCCA 1 cut(s) 482
MlyI GAGTC 1 cut(s) 377
MnlI CCTC 5 cut(s) 236, 239, 307, 429, 641
Mox20I TGGCCA 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 355
MscI TGGCCA 1 cut(s) 482
MseI TTAA 2 cut(s) 108, 563
Msp20I TGGCCA 1 cut(s) 482
MspA1I CMGCKG 1 cut(s) 146
MspI CCGG 1 cut(s) 270
MspR9I CCNGG 1 cut(s) 522
Mva1269I GAATGC 1 cut(s) 176
MvaI CCWGG 1 cut(s) 522
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 5 cut(s) 38, 47, 152, 161, 461
NheI GCTAGC 1 cut(s) 32
NlaIII CATG 1 cut(s) 544
NlaIV GGNNCC 1 cut(s) 657
NmuCI GTSAC 1 cut(s) 205
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PctI GAATGC 1 cut(s) 176
PdmI GAANNNNTTC 1 cut(s) 355
PfeI GAWTC 4 cut(s) 26, 242, 252, 356
PflMI CCANNNNNTGG 1 cut(s) 414
PinAI ACCGGT 1 cut(s) 269
PkrI GCNGC 6 cut(s) 40, 103, 148, 277, 454, 518
PleI GAGTC 1 cut(s) 377
PpsI GAGTC 1 cut(s) 377
PshBI ATTAAT 1 cut(s) 108
Psp6I CCWGG 1 cut(s) 520
PspGI CCWGG 1 cut(s) 520
PspN4I GGNNCC 1 cut(s) 657
PstNI CAGNNNCTG 1 cut(s) 29
PvuII CAGCTG 1 cut(s) 146
RsaI GTAC 3 cut(s) 196, 318, 467
RsaNI GTAC 3 cut(s) 195, 317, 466
SaqAI TTAA 2 cut(s) 108, 563
SatI GCNGC 6 cut(s) 39, 102, 147, 276, 453, 517
SchI GAGTC 1 cut(s) 377
ScrFI CCNGG 1 cut(s) 522
SfaNI GCATC 4 cut(s) 316, 513, 541, 567
Sse9I AATT 4 cut(s) 68, 105, 289, 496
SsiI CCGC 1 cut(s) 50
SspMI CTAG 2 cut(s) 33, 471
StyD4I CCNGG 1 cut(s) 520
TaaI ACNGT 2 cut(s) 442, 512
TaqI TCGA 4 cut(s) 81, 446, 549, 570
TasI AATT 4 cut(s) 68, 105, 289, 496
TfiI GAWTC 4 cut(s) 26, 242, 252, 356
Tru1I TTAA 2 cut(s) 108, 563
Tru9I TTAA 2 cut(s) 108, 563
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 6 cut(s) 38, 101, 146, 275, 452, 516
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 414
VspI ATTAAT 1 cut(s) 108
XapI RAATTY 2 cut(s) 289, 496
XmnI GAANNNNTTC 1 cut(s) 355
XspI CTAG 2 cut(s) 33, 471
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.