Rmu_sc0000687.1_g000018

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000687.1
OG0000170
Physical Location & Seq
Forward (+)
62421 .. 64615
2195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000687.1_g000018.1.cds

Sequence Viewer

Length: 1038 bp
atgcagcaaggcgatgcaaatgaaaaaggttctcaaaatgttcagcaagatggcaatgcaaatgatgaacatagaatgcagaatgctcagcaatgtggcatttcgaatggacatagttctgaaaatgttcatgatgaggtaatcattcataaaatgagaatgtatgcagttgtgacaggatcaaacaaaggaatcggattcgaaactgtaaggcagttagcctcaaagggaatcactgtggtcttaactgctagagatgagaagaggggccttgaaactgttgagaaacttatggagtctggcctctcaggccaagttgtttttaaccaacttgatgtggctgaccctgctagtattacttctctggcacaatttatcaaaactcagtttggaaaactcgatattttggttaacaatgcagggatattaggggctacagttgatgctgatggtcttaaagctgcaattgcatctggtgctggaccaggacagattgattggaaaaagttgttgactgaaacttacgagttaacagaagaatgcttgcaaatcaattattatggtgctaaaagaacagctgaagcactaattccactcctccagctatctgattcaccaaggattgttaatgtttcatccggttcggggaagttaaagaacataccaagtgatcgagtgaaaggagttcttagtacggatgtcgagaacctaagcgaagagagtgtagatgaaatattgacagagtttttaatcgatctcaaggagagtttacttgaaagcaagggttggccttctgtgatgtcaggctatacagtctcaaaagcagcaatgaatgcatatacaaggattctagccaagaagtaccccgcttttcgtgtcaactctgtttgccctggctttgtcaaaacagatattaacttaaatagcggcttcatacctgttgaagaaggtgctgcaagtgtcgtgaatttagcattgctgccaaatgatggccacacaggccaattcttttctctgtctgaagtacaaagtctttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00902 ko01110 map00902 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

345

Amino Acids

37.15

Weight (kDa)

5.05

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01800 AT1G01800 AT2G24190 AT2G24190 AT3G61220 AT3G61220 AT3G61220
fragaria_vesca FvH4_7g13591 FvH4_7g13601 FvH4_7g13602 FvH4_7g13603 FvH4_7g13603 FvH4_7g13603 FvH4_7g13620
malus_domestica MD01G1052500.v1.1 MD01G1052600.v1.1 MD01G1052700.v1.1 MD01G1052800.v1.1 MD01G1053000.v1.1 MD01G1053100.v1.1 MD01G1053200.v1.1 MD01G1053300.v1.1 MD04G1099300.v1.1 MD04G1099400.v1.1 MD04G1099500.v1.1 MD07G1064800.v1.1 MD07G1142200.v1.1 MD07G1142300.v1.1
prunus_persica Prupe.1G171500_v2.0.a1 Prupe.1G171600_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160400_v2.0.a1 Prupe.2G160500_v2.0.a1 Prupe.2G160600_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160900_v2.0.a1 Prupe.2G161000_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161200_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161400_v2.0.a1 Prupe.2G161500_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161800_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G162200_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.4G240700_v2.0.a1 Prupe.4G240800_v2.0.a1
pyrus_communis pycom01g07820 pycom01g07840 pycom01g07850 pycom01g07860 pycom01g07880 pycom01g07900 pycom04g09450 pycom04g09460 pycom07g01290 pycom07g12490 pycom07g12510 pycom07g12570 pycom07g14080
rosa_chinensis RchiOBHm_Chr1g0353391 RchiOBHm_Chr1g0353401 RchiOBHm_Chr1g0353411 RchiOBHm_Chr1g0353421 RchiOBHm_Chr1g0353431 RchiOBHm_Chr1g0353481 RchiOBHm_Chr1g0353511 RchiOBHm_Chr1g0353531 RchiOBHm_Chr1g0353541 RchiOBHm_Chr1g0353571 RchiOBHm_Chr1g0353581 RchiOBHm_Chr1g0353621 RchiOBHm_Chr1g0353661 RchiOBHm_Chr7g0224711 RchiOBHm_Chr7g0224731 RchiOBHm_Chr7g0224751
rosa_laevigata RLG00000001859 RLG00000001863 RLG00000028244 RLG00000028267 RLG00000028269 RLG00000028270 RLG00000028272
rosa_multiflora Rmu_co8260681.1_g000001 Rmu_co8305447.1_g000001 Rmu_co8330951.1_g000001 Rmu_co8341853.1_g000001 Rmu_sc0000144.1_g000019 Rmu_sc0000144.1_g000020 Rmu_sc0000144.1_g000026 Rmu_sc0000687.1_g000012 Rmu_sc0000687.1_g000018 Rmu_sc0000687.1_g000019 Rmu_sc0000687.1_g000020 Rmu_sc0000687.1_g000026 Rmu_sc0001207.1_g000001 Rmu_sc0001207.1_g000012 Rmu_sc0005914.1_g000002 Rmu_sc0005914.1_g000005 Rmu_sc0005914.1_g000007 Rmu_sc0005947.1_g000025 Rmu_sc0007658.1_g000005 Rmu_sc0011028.1_g000012 Rmu_sc0011028.1_g000013 Rmu_sc0026118.1_g000001 Rmu_sc0026975.1_g000001 Rmu_sc0027167.1_g000001 Rmu_sc0042792.1_g000001
rosa_roxburghii Rroxscaffold_3G00234470 Rroxscaffold_4G00301760 Rroxscaffold_4G00301810 Rroxscaffold_4G00301820 Rroxscaffold_4G00301830 Rroxscaffold_4G00301840 Rroxscaffold_4G00301860 Rroxscaffold_4G00301870
rosa_rugosa Rorug01G0235700 Rorug01G0236300 Rorug01G0236600 Rorug01G0236800 Rorug07G0225000.1 Rorug07G0225100
rosa_samantha Rh1AG247900 Rh1AG248000 Rh1AG248400 Rh1AG248500 Rh1AG248600 Rh1AG248800 Rh1AG249000 Rh1AG249100 Rh1BG217700 Rh1BG218000 Rh1BG218400 Rh1BG218600 Rh1BG218800 Rh1BG218900 Rh1BG219200 Rh1DG244000 Rh1DG244300 Rh1DG244800 Rh1DG245000 Rh1DG245200 Rh1DG245300 Rh1DG245600 Rh1DG246200 Rh7BG361100 Rh7CG396500 Rh7CG396700 Rh7DG371200
rosa_wichuraiana Rw1G021600 Rw1G021610 Rw1G021620 Rw1G021640 Rw1G021650 Rw1G021660 Rw1G021680 Rw1G021710 Rw1G021900 Rw7G031330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 989
AciI CCGC 2 cut(s) 867, 927
AclWI GGATC 1 cut(s) 187
AcoI YGGCCR 1 cut(s) 991
AcsI RAATTY 1 cut(s) 967
AcuI CTGAAG 1 cut(s) 600
AfaI GTAC 3 cut(s) 694, 863, 1026
AfiI CCNNNNNNNGG 2 cut(s) 645, 989
AgsI TTSAA 3 cut(s) 275, 776, 944
AjnI CCWGG 2 cut(s) 484, 892
AluBI AGCT 3 cut(s) 461, 578, 604
AluI AGCT 3 cut(s) 461, 578, 604
Alw26I GTCTC 1 cut(s) 820
AlwI GGATC 1 cut(s) 187
AoxI GGCC 6 cut(s) 268, 301, 310, 788, 991, 1000
ApeKI GCWGC 5 cut(s) 4, 461, 824, 953, 979
ApoI RAATTY 1 cut(s) 967
Asp700I GAANNNNTTC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 268, 482
AsuHPI GGTGA 1 cut(s) 606
AsuII TTCGAA 2 cut(s) 104, 201
AvaII GGWCC 1 cut(s) 482
BalI TGGCCA 1 cut(s) 993
BbvI GCAGC 5 cut(s) 16, 448, 836, 940, 966
BccI CCATC 3 cut(s) 44, 443, 983
BciT130I CCWGG 2 cut(s) 486, 894
BcoDI GTCTC 1 cut(s) 820
BfaI CTAG 3 cut(s) 252, 351, 851
BfmI CTRYAG 1 cut(s) 435
BglI GCCNNNNNGGC 2 cut(s) 309, 999
BisI GCNGC 6 cut(s) 5, 462, 825, 928, 954, 980
BlpI GCTNAGC 1 cut(s) 87
BlsI GCNGC 6 cut(s) 6, 463, 826, 929, 955, 981
Bme1390I CCNGG 2 cut(s) 486, 894
Bme18I GGWCC 1 cut(s) 482
BmgT120I GGNCC 2 cut(s) 268, 482
BmiI GGNNCC 1 cut(s) 269
BmrFI CCNGG 2 cut(s) 486, 894
BmsI GCATC 3 cut(s) 4, 433, 479
BpmI CTGGAG 1 cut(s) 584
Bpu10I CCTNAGC 1 cut(s) 710
Bpu1102I GCTNAGC 1 cut(s) 87
Bpu14I TTCGAA 2 cut(s) 104, 201
BpuEI CTTGAG 1 cut(s) 743
Bsa29I ATCGAT 1 cut(s) 753
BsaJI CCNNGG 2 cut(s) 617, 892
BsaWI WCCGGW 1 cut(s) 638
Bsc4I CCNNNNNNNGG 2 cut(s) 645, 989
Bse3DI GCAATG 4 cut(s) 61, 98, 834, 974
BseBI CCWGG 2 cut(s) 486, 894
BseCI ATCGAT 1 cut(s) 753
BseDI CCNNGG 2 cut(s) 617, 892
BseGI GGATG 2 cut(s) 635, 703
BseLI CCNNNNNNNGG 2 cut(s) 645, 989
BseMI GCAATG 4 cut(s) 61, 98, 834, 974
BseMII CTCAG 3 cut(s) 101, 321, 398
BseRI GAGGAG 1 cut(s) 587
BseXI GCAGC 5 cut(s) 16, 448, 836, 940, 966
BshFI GGCC 6 cut(s) 270, 303, 312, 790, 993, 1002
BshVI ATCGAT 1 cut(s) 753
BsiSI CCGG 1 cut(s) 639
BslI CCNNNNNNNGG 2 cut(s) 645, 989
BsmAI GTCTC 1 cut(s) 820
BsmI GAATGC 4 cut(s) 81, 88, 545, 838
BsnI GGCC 6 cut(s) 270, 303, 312, 790, 993, 1002
Bsp119I TTCGAA 2 cut(s) 104, 201
Bsp143I GATC 3 cut(s) 179, 670, 754
Bsp1720I GCTNAGC 1 cut(s) 87
BspACI CCGC 2 cut(s) 867, 927
BspANI GGCC 6 cut(s) 270, 303, 312, 790, 993, 1002
BspCNI CTCAG 3 cut(s) 100, 320, 397
BspDI ATCGAT 1 cut(s) 753
BspHI TCATGA 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 269
BspPI GGATC 1 cut(s) 187
BspT104I TTCGAA 2 cut(s) 104, 201
BsrDI GCAATG 4 cut(s) 61, 98, 834, 974
BssECI CCNNGG 2 cut(s) 617, 892
BssMI GATC 3 cut(s) 179, 670, 754
BssT1I CCWWGG 1 cut(s) 617
Bst2UI CCWGG 2 cut(s) 486, 894
Bst4CI ACNGT 5 cut(s) 208, 238, 280, 439, 814
Bst6I CTCTTC 2 cut(s) 257, 711
BstAPI GCANNNNNTGC 2 cut(s) 476, 833
BstBI TTCGAA 2 cut(s) 104, 201
BstC8I GCNNGC 1 cut(s) 545
BstDEI CTNAG 5 cut(s) 87, 307, 384, 689, 710
BstF5I GGATG 2 cut(s) 635, 703
BstKTI GATC 3 cut(s) 182, 673, 757
BstMAI GTCTC 1 cut(s) 820
BstMBI GATC 3 cut(s) 179, 670, 754
BstMWI GCNNNNNNNGC 6 cut(s) 309, 347, 467, 476, 833, 999
BstNI CCWGG 2 cut(s) 486, 894
BstSCI CCNGG 2 cut(s) 484, 892
BstSFI CTRYAG 1 cut(s) 435
BstV1I GCAGC 5 cut(s) 16, 448, 836, 940, 966
Bsu15I ATCGAT 1 cut(s) 753
BsuRI GGCC 6 cut(s) 270, 303, 312, 790, 993, 1002
BsuTUI ATCGAT 1 cut(s) 753
BtgZI GCGATG 1 cut(s) 27
BtsCI GGATG 2 cut(s) 635, 703
BtsIMutI CAGTG 1 cut(s) 234
Cac8I GCNNGC 1 cut(s) 545
CciI TCATGA 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 268, 482
ClaI ATCGAT 1 cut(s) 753
Csp6I GTAC 3 cut(s) 693, 862, 1025
CviAII CATG 1 cut(s) 131
CviQI GTAC 3 cut(s) 693, 862, 1025
DdeI CTNAG 5 cut(s) 87, 307, 384, 689, 710
DpnI GATC 3 cut(s) 181, 672, 756
DpnII GATC 3 cut(s) 179, 670, 754
EaeI YGGCCR 1 cut(s) 991
Eam1104I CTCTTC 2 cut(s) 257, 711
EarI CTCTTC 2 cut(s) 257, 711
Eco130I CCWWGG 1 cut(s) 617
Eco47I GGWCC 1 cut(s) 482
Eco57I CTGAAG 1 cut(s) 600
EcoO109I RGGNCCY 1 cut(s) 268
EcoRII CCWGG 2 cut(s) 484, 892
EcoT14I CCWWGG 1 cut(s) 617
EcoT22I ATGCAT 1 cut(s) 838
ErhI CCWWGG 1 cut(s) 617
FaeI CATG 1 cut(s) 134
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FatI CATG 1 cut(s) 130
FauI CCCGC 1 cut(s) 874
Fnu4HI GCNGC 6 cut(s) 5, 462, 825, 928, 954, 980
FokI GGATG 2 cut(s) 622, 710
Fsp4HI GCNGC 6 cut(s) 5, 462, 825, 928, 954, 980
FspBI CTAG 3 cut(s) 252, 351, 851
GluI GCNGC 6 cut(s) 5, 462, 825, 928, 954, 980
GsuI CTGGAG 1 cut(s) 584
HaeIII GGCC 6 cut(s) 270, 303, 312, 790, 993, 1002
HapII CCGG 1 cut(s) 639
Hin1II CATG 1 cut(s) 134
HincII GTYRAC 4 cut(s) 412, 513, 531, 880
HindII GTYRAC 4 cut(s) 412, 513, 531, 880
HinfI GANTC 6 cut(s) 192, 198, 231, 296, 611, 847
HpaI GTTAAC 2 cut(s) 412, 531
HpaII CCGG 1 cut(s) 639
HphI GGTGA 1 cut(s) 606
Hpy166II GTNNAC 5 cut(s) 412, 513, 531, 770, 880
Hpy188I TCNGA 4 cut(s) 121, 197, 610, 1021
Hpy188III TCNNGA 3 cut(s) 131, 703, 964
Hpy8I GTNNAC 5 cut(s) 412, 513, 531, 770, 880
HpyAV CCTTC 2 cut(s) 801, 941
HpyCH4III ACNGT 5 cut(s) 208, 238, 280, 439, 814
HpyF10VI GCNNNNNNNGC 6 cut(s) 309, 347, 467, 476, 833, 999
HpyF3I CTNAG 5 cut(s) 87, 307, 384, 689, 710
Hsp92II CATG 1 cut(s) 134
KspAI GTTAAC 2 cut(s) 412, 531
Kzo9I GATC 3 cut(s) 179, 670, 754
Lsp1109I GCAGC 5 cut(s) 16, 448, 836, 940, 966
LweI GCATC 3 cut(s) 4, 433, 479
MaeI CTAG 3 cut(s) 252, 351, 851
MaeIII GTNAC 1 cut(s) 172
MalI GATC 3 cut(s) 181, 672, 756
MboI GATC 3 cut(s) 179, 670, 754
MboII GAAGA 4 cut(s) 274, 548, 728, 956
MfeI CAATTG 1 cut(s) 465
MlsI TGGCCA 1 cut(s) 993
MluCI AATT 6 cut(s) 371, 465, 553, 588, 967, 1004
MluNI TGGCCA 1 cut(s) 993
MlyI GAGTC 1 cut(s) 305
MnlI CCTC 5 cut(s) 130, 232, 258, 314, 608
Mox20I TGGCCA 1 cut(s) 993
Mph1103I ATGCAT 1 cut(s) 838
MroXI GAANNNNTTC 1 cut(s) 126
MscI TGGCCA 1 cut(s) 993
Msp20I TGGCCA 1 cut(s) 993
MspA1I CMGCKG 1 cut(s) 578
MspI CCGG 1 cut(s) 639
MspR9I CCNGG 2 cut(s) 486, 894
MunI CAATTG 1 cut(s) 465
Mva1269I GAATGC 4 cut(s) 81, 88, 545, 838
MvaI CCWGG 2 cut(s) 486, 894
MwoI GCNNNNNNNGC 6 cut(s) 309, 347, 467, 476, 833, 999
NdeII GATC 3 cut(s) 179, 670, 754
NlaIII CATG 1 cut(s) 134
NlaIV GGNNCC 1 cut(s) 269
NmuCI GTSAC 1 cut(s) 172
NsiI ATGCAT 1 cut(s) 838
NspV TTCGAA 2 cut(s) 104, 201
PagI TCATGA 1 cut(s) 130
PctI GAATGC 4 cut(s) 81, 88, 545, 838
PdmI GAANNNNTTC 1 cut(s) 126
PfeI GAWTC 5 cut(s) 192, 198, 231, 611, 847
PflMI CCANNNNNTGG 1 cut(s) 989
PkrI GCNGC 6 cut(s) 6, 463, 826, 929, 955, 981
PleI GAGTC 1 cut(s) 304
PpsI GAGTC 1 cut(s) 304
Psp6I CCWGG 2 cut(s) 484, 892
PspGI CCWGG 2 cut(s) 484, 892
PspN4I GGNNCC 1 cut(s) 269
PspPI GGNCC 2 cut(s) 268, 482
PvuII CAGCTG 1 cut(s) 578
RsaI GTAC 3 cut(s) 694, 863, 1026
RsaNI GTAC 3 cut(s) 693, 862, 1025
SatI GCNGC 6 cut(s) 5, 462, 825, 928, 954, 980
Sau3AI GATC 3 cut(s) 179, 670, 754
Sau96I GGNCC 2 cut(s) 268, 482
SchI GAGTC 1 cut(s) 305
ScrFI CCNGG 2 cut(s) 486, 894
SetI ASST 8 cut(s) 31, 141, 463, 580, 606, 711, 940, 952
SfaNI GCATC 3 cut(s) 4, 433, 479
SfcI CTRYAG 1 cut(s) 435
SfiI GGCCNNNNNGGCC 2 cut(s) 309, 999
SfuI TTCGAA 2 cut(s) 104, 201
SinI GGWCC 1 cut(s) 482
SmlI CTYRAG 1 cut(s) 758
SmoI CTYRAG 1 cut(s) 758
Sse9I AATT 6 cut(s) 371, 465, 553, 588, 967, 1004
SsiI CCGC 2 cut(s) 867, 927
SspI AATATT 1 cut(s) 735
SspMI CTAG 3 cut(s) 252, 351, 851
StyD4I CCNGG 2 cut(s) 484, 892
StyI CCWWGG 1 cut(s) 617
TaaI ACNGT 5 cut(s) 208, 238, 280, 439, 814
TaqI TCGA 6 cut(s) 104, 201, 399, 673, 702, 753
TasI AATT 6 cut(s) 371, 465, 553, 588, 967, 1004
TatI WGTACW 1 cut(s) 1024
TauI GCSGC 1 cut(s) 930
TfiI GAWTC 5 cut(s) 192, 198, 231, 611, 847
TscAI CASTG 1 cut(s) 241
TseFI GTSAC 1 cut(s) 172
TseI GCWGC 5 cut(s) 4, 461, 824, 953, 979
Tsp45I GTSAC 1 cut(s) 172
TspDTI ATGAA 8 cut(s) 36, 81, 119, 137, 624, 744, 845, 922
TspGWI ACGGA 1 cut(s) 710
TspRI CASTG 1 cut(s) 241
Van91I CCANNNNNTGG 1 cut(s) 989
VpaK11BI GGWCC 1 cut(s) 482
XapI RAATTY 1 cut(s) 967
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 3 cut(s) 252, 351, 851
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.