pycom07g12570

( )-neomenthol

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
13890898 .. 13891422
525 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g12570.1

Sequence Viewer

Length: 525 bp
ATGACTGAAAATTATGAGTTAGCAAAAGAATGCGTGCAAATAAACTATTACGGTGCTAAACGAACAACCGAAGCGCTTATTCCACTCCTCCGGTTATCCGAATCACCAAGAATTGTTAACGTTTCATCCTCCATGGGCAACTTAAACAAAATACCTAGTGACAGGGTTAAAGGAGTCTTCAGTGATGTCGAGAACCTAACAGAAGAGCGAATAGACGAGGTGCTGACTCAGTTTCTAGAAGACTTCAAGGAGGGTTCGCTTGAGAGCAAAGGCTGGCCTTCTCATATGTCTAGCTATATACTCTCAAAGGCAGCAATGAATGCATATACACGTGTTCTAGCCAACAAGTACCCCGATTTTCGTATCAATTGTGTCTGCCCCGGATTTGTCAAAACAGATATAAACTCCAATTCCGGCGTCCTGCCTGTCGAAGAAGGTGCAGCAAGGGTTGTGAAGTTAGCATTCCTGCCCAATGATGGCCCTTCTGGCTGCTTCTTTTCTCAGAATGAAGTGACAGATTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

175

Amino Acids

19.37

Weight (kDa)

5.0

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short_C2 PF13561 90 - 137 2.3e-07 Enoyl-(Acyl carrier protein) reductase
adh_short PF00106 94 - 137 6.2e-07 short chain dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000170)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G01800 AT1G01800 AT2G24190 AT2G24190 AT3G61220 AT3G61220 AT3G61220
fragaria_vesca FvH4_7g13591 FvH4_7g13601 FvH4_7g13602 FvH4_7g13603 FvH4_7g13603 FvH4_7g13603 FvH4_7g13620
malus_domestica MD01G1052500.v1.1 MD01G1052600.v1.1 MD01G1052700.v1.1 MD01G1052800.v1.1 MD01G1053000.v1.1 MD01G1053100.v1.1 MD01G1053200.v1.1 MD01G1053300.v1.1 MD04G1099300.v1.1 MD04G1099400.v1.1 MD04G1099500.v1.1 MD07G1064800.v1.1 MD07G1142200.v1.1 MD07G1142300.v1.1
prunus_persica Prupe.1G171500_v2.0.a1 Prupe.1G171600_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160100_v2.0.a1 Prupe.2G160400_v2.0.a1 Prupe.2G160500_v2.0.a1 Prupe.2G160600_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160700_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160800_v2.0.a1 Prupe.2G160900_v2.0.a1 Prupe.2G161000_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161100_v2.0.a1 Prupe.2G161200_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161300_v2.0.a1 Prupe.2G161400_v2.0.a1 Prupe.2G161500_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161600_v2.0.a1 Prupe.2G161800_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G161900_v2.0.a1 Prupe.2G162200_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.2G162300_v2.0.a1 Prupe.4G240700_v2.0.a1 Prupe.4G240800_v2.0.a1
pyrus_communis pycom01g07820 pycom01g07840 pycom01g07850 pycom01g07860 pycom01g07880 pycom01g07900 pycom04g09450 pycom04g09460 pycom07g01290 pycom07g12490 pycom07g12510 pycom07g12570 pycom07g14080
rosa_chinensis RchiOBHm_Chr1g0353391 RchiOBHm_Chr1g0353401 RchiOBHm_Chr1g0353411 RchiOBHm_Chr1g0353421 RchiOBHm_Chr1g0353431 RchiOBHm_Chr1g0353481 RchiOBHm_Chr1g0353511 RchiOBHm_Chr1g0353531 RchiOBHm_Chr1g0353541 RchiOBHm_Chr1g0353571 RchiOBHm_Chr1g0353581 RchiOBHm_Chr1g0353621 RchiOBHm_Chr1g0353661 RchiOBHm_Chr7g0224711 RchiOBHm_Chr7g0224731 RchiOBHm_Chr7g0224751
rosa_laevigata RLG00000001859 RLG00000001863 RLG00000028244 RLG00000028267 RLG00000028269 RLG00000028270 RLG00000028272
rosa_multiflora Rmu_co8260681.1_g000001 Rmu_co8305447.1_g000001 Rmu_co8330951.1_g000001 Rmu_co8341853.1_g000001 Rmu_sc0000144.1_g000019 Rmu_sc0000144.1_g000020 Rmu_sc0000144.1_g000026 Rmu_sc0000687.1_g000012 Rmu_sc0000687.1_g000018 Rmu_sc0000687.1_g000019 Rmu_sc0000687.1_g000020 Rmu_sc0000687.1_g000026 Rmu_sc0001207.1_g000001 Rmu_sc0001207.1_g000012 Rmu_sc0005914.1_g000002 Rmu_sc0005914.1_g000005 Rmu_sc0005914.1_g000007 Rmu_sc0005947.1_g000025 Rmu_sc0007658.1_g000005 Rmu_sc0011028.1_g000012 Rmu_sc0011028.1_g000013 Rmu_sc0026118.1_g000001 Rmu_sc0026975.1_g000001 Rmu_sc0027167.1_g000001 Rmu_sc0042792.1_g000001
rosa_roxburghii Rroxscaffold_3G00234470 Rroxscaffold_4G00301760 Rroxscaffold_4G00301810 Rroxscaffold_4G00301820 Rroxscaffold_4G00301830 Rroxscaffold_4G00301840 Rroxscaffold_4G00301860 Rroxscaffold_4G00301870
rosa_rugosa Rorug01G0235700 Rorug01G0236300 Rorug01G0236600 Rorug01G0236800 Rorug07G0225000.1 Rorug07G0225100
rosa_samantha Rh1AG247900 Rh1AG248000 Rh1AG248400 Rh1AG248500 Rh1AG248600 Rh1AG248800 Rh1AG249000 Rh1AG249100 Rh1BG217700 Rh1BG218000 Rh1BG218400 Rh1BG218600 Rh1BG218800 Rh1BG218900 Rh1BG219200 Rh1DG244000 Rh1DG244300 Rh1DG244800 Rh1DG245000 Rh1DG245200 Rh1DG245300 Rh1DG245600 Rh1DG246200 Rh7BG361100 Rh7CG396500 Rh7CG396700 Rh7DG371200
rosa_wichuraiana Rw1G021600 Rw1G021610 Rw1G021620 Rw1G021640 Rw1G021650 Rw1G021660 Rw1G021680 Rw1G021710 Rw1G021900 Rw7G031330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 120
AcuI CTGAAG 1 cut(s) 163
AcvI CACGTG 1 cut(s) 332
AcyI GRCGYC 1 cut(s) 417
AfaI GTAC 1 cut(s) 350
AfeI AGCGCT 1 cut(s) 75
AfiI CCNNNNNNNGG 1 cut(s) 476
AflIII ACRYGT 2 cut(s) 329, 331
AgsI TTSAA 1 cut(s) 247
AluBI AGCT 1 cut(s) 294
AluI AGCT 1 cut(s) 294
Aor51HI AGCGCT 1 cut(s) 75
AoxI GGCC 2 cut(s) 275, 478
ApeKI GCWGC 3 cut(s) 311, 440, 489
AspLEI GCGC 1 cut(s) 76
AspS9I GGNCC 1 cut(s) 479
AsuC2I CCSGG 1 cut(s) 381
AsuHPI GGTGA 1 cut(s) 96
BbrPI CACGTG 1 cut(s) 332
BbsI GAAGAC 2 cut(s) 169, 246
BbvI GCAGC 3 cut(s) 323, 452, 476
BccI CCATC 1 cut(s) 470
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BcnI CCSGG 1 cut(s) 381
BfaI CTAG 4 cut(s) 156, 236, 291, 338
BfoI RGCGCY 1 cut(s) 77
BglI GCCNNNNNGGC 1 cut(s) 486
BisI GCNGC 3 cut(s) 312, 441, 490
BlsI GCNGC 3 cut(s) 313, 442, 491
Bme1390I CCNGG 1 cut(s) 381
BmgT120I GGNCC 1 cut(s) 479
BmrFI CCNGG 1 cut(s) 381
BpiI GAAGAC 2 cut(s) 169, 246
BpuEI CTTGAG 1 cut(s) 281
BpuMI CCSGG 1 cut(s) 381
BsaAI YACGTR 1 cut(s) 332
BsaHI GRCGYC 1 cut(s) 417
BsaJI CCNNGG 2 cut(s) 132, 379
BsaWI WCCGGW 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 476
Bse3DI GCAATG 1 cut(s) 321
BseDI CCNNGG 2 cut(s) 132, 379
BseGI GGATG 1 cut(s) 125
BseLI CCNNNNNNNGG 1 cut(s) 476
BseMI GCAATG 1 cut(s) 321
BseMII CTCAG 2 cut(s) 242, 515
BseRI GAGGAG 1 cut(s) 77
BseXI GCAGC 3 cut(s) 323, 452, 476
BsgI GTGCAG 1 cut(s) 459
BshFI GGCC 2 cut(s) 277, 480
BsiSI CCGG 3 cut(s) 91, 381, 414
BslI CCNNNNNNNGG 1 cut(s) 476
BsmI GAATGC 3 cut(s) 35, 325, 461
BsnI GGCC 2 cut(s) 277, 480
Bsp19I CCATGG 1 cut(s) 132
BspANI GGCC 2 cut(s) 277, 480
BspCNI CTCAG 2 cut(s) 241, 514
BspQI GCTCTTC 1 cut(s) 198
BsrDI GCAATG 1 cut(s) 321
BssECI CCNNGG 2 cut(s) 132, 379
BssNI GRCGYC 1 cut(s) 417
BssT1I CCWWGG 1 cut(s) 132
Bst4CI ACNGT 1 cut(s) 53
Bst6I CTCTTC 1 cut(s) 198
BstACI GRCGYC 1 cut(s) 417
BstAPI GCANNNNNTGC 1 cut(s) 320
BstBAI YACGTR 1 cut(s) 332
BstC8I GCNNGC 2 cut(s) 35, 275
BstDEI CTNAG 2 cut(s) 228, 501
BstDSI CCRYGG 1 cut(s) 132
BstF5I GGATG 1 cut(s) 125
BstH2I RGCGCY 1 cut(s) 77
BstHHI GCGC 1 cut(s) 76
BstMWI GCNNNNNNNGC 2 cut(s) 320, 486
BstSCI CCNGG 1 cut(s) 379
BstV1I GCAGC 3 cut(s) 323, 452, 476
BstV2I GAAGAC 2 cut(s) 169, 246
BsuRI GGCC 2 cut(s) 277, 480
BtgI CCRYGG 1 cut(s) 132
BtsCI GGATG 1 cut(s) 125
BtsIMutI CAGTG 1 cut(s) 187
Cac8I GCNNGC 2 cut(s) 35, 275
CfoI GCGC 1 cut(s) 76
Cfr13I GGNCC 1 cut(s) 479
CseI GACGC 1 cut(s) 406
Csp6I GTAC 1 cut(s) 349
CviAII CATG 1 cut(s) 133
CviJI RGCY 6 cut(s) 273, 277, 294, 341, 480, 489
CviKI_1 RGCY 6 cut(s) 273, 277, 294, 341, 480, 489
CviQI GTAC 1 cut(s) 349
DdeI CTNAG 2 cut(s) 228, 501
Eam1104I CTCTTC 1 cut(s) 198
EarI CTCTTC 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 132
Eco47III AGCGCT 1 cut(s) 75
Eco57I CTGAAG 1 cut(s) 163
Eco72I CACGTG 1 cut(s) 332
EcoT14I CCWWGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 325
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 1 cut(s) 136
FaiI YATR 9 cut(s) 15, 134, 285, 287, 297, 299, 325, 327, 401
FatI CATG 1 cut(s) 132
FauNDI CATATG 1 cut(s) 285
Fnu4HI GCNGC 3 cut(s) 312, 441, 490
FokI GGATG 1 cut(s) 112
Fsp4HI GCNGC 3 cut(s) 312, 441, 490
FspBI CTAG 4 cut(s) 156, 236, 291, 338
GlaI GCGC 1 cut(s) 75
GluI GCNGC 3 cut(s) 312, 441, 490
HaeII RGCGCY 1 cut(s) 77
HaeIII GGCC 2 cut(s) 277, 480
HapII CCGG 3 cut(s) 91, 381, 414
HgaI GACGC 1 cut(s) 406
HhaI GCGC 1 cut(s) 76
Hin1I GRCGYC 1 cut(s) 417
Hin1II CATG 1 cut(s) 136
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HinfI GANTC 3 cut(s) 101, 174, 226
HpaI GTTAAC 1 cut(s) 118
HpaII CCGG 3 cut(s) 91, 381, 414
HphI GGTGA 1 cut(s) 96
Hpy166II GTNNAC 1 cut(s) 118
Hpy188I TCNGA 2 cut(s) 100, 504
Hpy188III TCNNGA 2 cut(s) 190, 236
Hpy8I GTNNAC 1 cut(s) 118
HpyAV CCTTC 3 cut(s) 288, 428, 492
HpyCH4III ACNGT 1 cut(s) 53
HpyCH4IV ACGT 2 cut(s) 120, 331
HpyCH4V TGCA 3 cut(s) 37, 323, 440
HpyF10VI GCNNNNNNNGC 2 cut(s) 320, 486
HpyF3I CTNAG 2 cut(s) 228, 501
HpySE526I ACGT 2 cut(s) 120, 331
Hsp92I GRCGYC 1 cut(s) 417
Hsp92II CATG 1 cut(s) 136
HspAI GCGC 1 cut(s) 74
KspAI GTTAAC 1 cut(s) 118
LguI GCTCTTC 1 cut(s) 198
LpnPI CCDG 9 cut(s) 104, 148, 259, 394, 427, 434, 438, 471, 479
Lsp1109I GCAGC 3 cut(s) 323, 452, 476
MaeI CTAG 4 cut(s) 156, 236, 291, 338
MaeII ACGT 2 cut(s) 120, 331
MaeIII GTNAC 2 cut(s) 158, 511
MboII GAAGA 4 cut(s) 169, 215, 251, 443
MfeI CAATTG 1 cut(s) 367
MluCI AATT 4 cut(s) 10, 111, 367, 409
MlyI GAGTC 2 cut(s) 183, 220
MnlI CCTC 4 cut(s) 98, 139, 211, 244
Mph1103I ATGCAT 1 cut(s) 325
MseI TTAA 3 cut(s) 117, 143, 168
MspI CCGG 3 cut(s) 91, 381, 414
MspR9I CCNGG 1 cut(s) 381
MunI CAATTG 1 cut(s) 367
Mva1269I GAATGC 3 cut(s) 35, 325, 461
MwoI GCNNNNNNNGC 2 cut(s) 320, 486
NciI CCSGG 1 cut(s) 381
NcoI CCATGG 1 cut(s) 132
NdeI CATATG 1 cut(s) 285
NlaIII CATG 1 cut(s) 136
NmuCI GTSAC 2 cut(s) 158, 511
NsiI ATGCAT 1 cut(s) 325
PciSI GCTCTTC 1 cut(s) 198
PctI GAATGC 3 cut(s) 35, 325, 461
PfeI GAWTC 1 cut(s) 101
PkrI GCNGC 3 cut(s) 313, 442, 491
PleI GAGTC 2 cut(s) 182, 220
PmaCI CACGTG 1 cut(s) 332
PmlI CACGTG 1 cut(s) 332
PpsI GAGTC 2 cut(s) 182, 220
Ppu21I YACGTR 1 cut(s) 332
Psp1406I AACGTT 1 cut(s) 120
PspCI CACGTG 1 cut(s) 332
PspPI GGNCC 1 cut(s) 479
RsaI GTAC 1 cut(s) 350
RsaNI GTAC 1 cut(s) 349
SapI GCTCTTC 1 cut(s) 198
SaqAI TTAA 3 cut(s) 117, 143, 168
SatI GCNGC 3 cut(s) 312, 441, 490
Sau96I GGNCC 1 cut(s) 479
SchI GAGTC 2 cut(s) 183, 220
ScrFI CCNGG 1 cut(s) 381
SetI ASST 7 cut(s) 123, 157, 198, 222, 296, 334, 439
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
Sse9I AATT 4 cut(s) 10, 111, 367, 409
SspMI CTAG 4 cut(s) 156, 236, 291, 338
StyD4I CCNGG 1 cut(s) 379
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 1 cut(s) 53
TaiI ACGT 2 cut(s) 123, 334
TaqI TCGA 2 cut(s) 189, 429
TasI AATT 4 cut(s) 10, 111, 367, 409
TfiI GAWTC 1 cut(s) 101
Tru1I TTAA 3 cut(s) 117, 143, 168
Tru9I TTAA 3 cut(s) 117, 143, 168
TscAI CASTG 1 cut(s) 187
TseFI GTSAC 2 cut(s) 158, 511
TseI GCWGC 3 cut(s) 311, 440, 489
Tsp45I GTSAC 2 cut(s) 158, 511
TspDTI ATGAA 3 cut(s) 114, 332, 522
TspRI CASTG 1 cut(s) 187
XbaI TCTAGA 1 cut(s) 235
XspI CTAG 4 cut(s) 156, 236, 291, 338
Zsp2I ATGCAT 1 cut(s) 325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.