pycom17g19620

protein FAR1-RELATED SEQUENCE

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
17542843 .. 17545820
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2442 bp
ATGGAGAAAAATGACTGCACAAGGTTAAGTAGCGAGTTGTTAAGTGGCGAAGAAGTGGATTTGCAAGGTAACGGATCTTCTTTGAGATCTAATGATCCAGATAAAGTTGAAGAGATGACTGCAGATCTCAAACTTGGAATCGAGTTCAGTTCTCATGATAGTGCATATGTAGCTTATGTCAAGTATGGTGCAAAACACGGTTTTGATGTGAGGAAGCATCATAGAAAGACTAATAAGATGGGTCTTGTATCAAGGGTAACTTATGTTTGTTCAAAACAAGGTCACCGGAGAAAGGATAATAAACGGTGTGAGAGTATAACTTATTCTTTACCAAGTTCAAGGGTTGGCTGTGAAGCGCATATGGTTTGTTTACTCATGAAAACTGGAAAGTTTAAGATTATATCGTTTAATGCAAGTCATAATCATGATTTGATTAAGGCACCCATGAAACACATGCTAAAGGTTAATCGTTGTTTATCTAGAGCTCAAAAGGGACATGTTGCTGACGGGGAAAAATCAAGGTCACCAATAAAAGAAACAGTGGAACTAGTGAGTAGAGAAGTTGAGGGGCAAGAGAATCTTGGTTCCGGGGATAACGATTATCGAAATTACCTACAGAGAAAGCGGAAGTTAAAAATGGAAAAGGGAGATGCTGGGGCCATATTGCAATACTTTCAAAATATGCGTGAAGATAACTCATCTTGTTTTTATTCAGTGCAGCTTGATGAGGATGATAGGATCACAAATATATTTTGGGCAGATGCACGTTCAGTTTGTGATTATAAAGCCTTCGGTGATGTTGTTTGTTTTGATACCACTTATCAGATAAACGAATATGGTAGGCCATTTGCACCATTGATTGGGGTTAATCATCATAAACAAATTGTAGTTTTTGGTGCAGCTTTACTATATGATGATAGCAGAGACTCTTTTAAGTGGCTGTTTGAGACTTTTCTTGCAGCAATGTCTGGGAAGCAACCGAAGACCATACTCACAGACCAATCTGCTGCAATGGCAGAGGCAATATTAGAAGTTTTTCCTGAAGCTAACCATCGGTTATGTGCTTGGCATATTTACCAGAAAGCTGCCAAGAATTTAAGCCACGTGTTTCATGCATCAAAGCAATTTGCTTGTGATCTTAGCAAGTGTGTATATGAATACGAAGATAAAGATGCATGGCTTTCTGCATGGAATGATATGCTTGAAAATTATGATCTCAAGGAGGATAATTGGTTAAAAGAAATATATGAAGTGAGGGAAAAATGGGCATTGGTGTATGAACGACACACTTTCACTGCAGACTTGATGAGTATACAACACAAGGAAAGTATCACCAATGTGTTGAAAAAACACTTGATGCCAAGTCATGATCTCTTGTGCTTCTTTGAACATTTTGAGAATATTTTGGCAGATCGACGAGATAAGGAATTACAAGCTGATTTCAAGATGATGCAGACCGTACCTTCACCAGTAATTAATGTGGAGATGTTAGAGCGTGCTGTGGAGGTTTATACCCCAGAAGTTTTTAGACTCTTTGAAAAAGAGTATATGGGAATTCTTAACTGCAGTGTCTATAAAATTTGTAAGTCTGGGATGACAAGTGAATACAAAGTATCTTATAGATCTCATGAGCATTTGGTTAAATATGATGGTTCAACACAAGCAGTTAATTGTAGTTGCATGAAGTTCACTTTTGTTGGGATTTTATGTTCTCATGCATTGAAAGTGCTAGATAAGAAGAATGTGAAAACAATCCCACCTGATTACATATTGAAGCGCTGGACAAGAGGTGCAAGGGATAGGAGCCTCACTAGTTACCATGGAATTGAAACTAGCAACAATCCAAGGGAGTCTCCTGGGAAGTGTTATAGCCATTTGTGCCATAATTTTCGTGAGATAGCATCCCTTGCAGCAGAAGATGAGAGGTTAATTGCATGTGCACACGATTGGTCAGTTCAGTTGCTTAAAAGTTTAGAGGAAATGAAGAAAAATCTTGGCCTAGATAATGTACCTGTTCATAAAAATTCAGAAGGCGAAGCTTTAGTTGGAGAAAGTGGTGGAACTAAGCAGGTGAAAATGGTAAAGCACAACGATTGTGAAATAACAAAAGAACGTGGAGTTAAAAGAAAGCATACAGCGAAATGCCCATGTAGTAGACTGACAGAGCCTGCGGAAACTCAGAAGCATATACCACCAACCAAAGGCACACAATATGCAGCAAGACATTGGCTGTTAGAGGGATCCTCTGGTACTCCGCCTTTCACTCAACGTCGTCAGGGGTCGTATGTTGATAATGGAAACCAAGTGTCATATTCAAGTAAAACTTTTGGCGCAACTCCAAGTTTCCTCAATAACATGCATTTCACTCAACTATGTCAGGAACCTTCGAGGCATCATAATCACTGTTCGCAAAGTAATGGAGGCAAAGAGTCAGGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

814

Amino Acids

92.89

Weight (kDa)

8.3

Isoelectric Point (pI)

45.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FAR1 PF03101 59 - 145 1.5e-15 FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like PF21056 228 - 350 1.1e-10 Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE PF10551 267 - 361 1.7e-28 MULE transposase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000325)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g24391 FvH4_2g38071 FvH4_3g07131 FvH4_3g22481 FvH4_4g15809 FvH4_5g37230 FvH4_7g25201 FvH4_7g29092 FvH4_7g29093
malus_domestica MD01G1197600.v1.1 MD17G1186900.v1.1
prunus_persica Prupe.1G227400_v2.0.a1 Prupe.2G291000_v2.0.a1 Prupe.4G268600_v2.0.a1 Prupe.5G094100_v2.0.a1
pyrus_communis pycom01g20780 pycom17g19620
rosa_chinensis RchiOBHm_Chr1g0376821 RchiOBHm_Chr5g0061941 RchiOBHm_Chr5g0078991 RchiOBHm_Chr6g0276821 RchiOBHm_Chr7g0191321
rosa_laevigata RLG00000007883 RLG00000008804 RLG00000010632 RLG00000026567 RLG00000035244 RLG00000036018 RLG00000036909
rosa_multiflora Rmu_sc0001036.1_g000026 Rmu_sc0001556.1_g000021 Rmu_sc0001974.1_g000022 Rmu_sc0002113.1_g000006 Rmu_sc0002572.1_g000008 Rmu_sc0004808.1_g000011 Rmu_sc0005117.1_g000017 Rmu_sc0005319.1_g000016 Rmu_sc0008432.1_g000005 Rmu_sc0010475.1_g000001 Rmu_sc0015522.1_g000003 Rmu_ssc0000066.1_g000009 Rmu_ssc0000400.1_g000102 Rmu_ssc0000400.1_g000103
rosa_roxburghii Rroxscaffold_1G00071290 Rroxscaffold_2G00141280 Rroxscaffold_3G00233790 Rroxscaffold_4G00297530 Rroxscaffold_5G00368860 Rroxscaffold_5G00386220 Rroxscaffold_7G00159400
rosa_rugosa Rorug01G0146800.1 Rorug01G0162100.1 Rorug01G0162200.1 Rorug01G0398600 Rorug01G0398700 Rorug02G0344200 Rorug02G0344300 Rorug02G0344400 Rorug03G0046200 Rorug03G0153200 Rorug04G0182500 Rorug04G0182600 Rorug05G0257700 Rorug05G0386400 Rorug05G0386400 Rorug05G0386500 Rorug05G0460900.1 Rorug05G0467000 Rorug07G0110400
rosa_samantha Rh1AG183500 Rh1AG416000 Rh1BG023600 Rh1BG145400 Rh1BG145500 Rh1BG278800 Rh1BG375400 Rh1CG389200 Rh1DG166300 Rh1DG176900 Rh1DG309900 Rh1DG406000 Rh2BG439100 Rh2BG502200 Rh2CG314800 Rh2CG517400 Rh2CG532000 Rh2DG449100 Rh3BG109900 Rh3CG230400 Rh3CG246600 Rh3CG289400 Rh3CG289500 Rh3DG120600 Rh4AG144400 Rh4AG408200 Rh4BG419300 Rh4CG101900 Rh4CG151000 Rh4CG226900 Rh4DG235400 Rh5AG265900 Rh5AG375200 Rh5CG559600 Rh5DG218200 Rh6AG074500 Rh6BG291800 Rh6CG292800 Rh6DG284900
rosa_wichuraiana Rw0G013240 Rw1G036490 Rw5G024920 Rw5G030730 Rw5G033710 Rw6G033840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
AarI CACCTGC 1 cut(s) 2059
Acc36I ACCTGC 1 cut(s) 2059
AccB1I GGYRCC 1 cut(s) 439
AccB7I CCANNNNNTGG 1 cut(s) 860
AccI GTMKAC 2 cut(s) 1312, 2155
AciI CCGC 3 cut(s) 625, 2171, 2255
AclWI GGATC 5 cut(s) 82, 89, 746, 2235, 2248
AcsI RAATTY 4 cut(s) 1093, 1554, 1578, 2023
AcuI CTGAAG 1 cut(s) 1062
AcvI CACGTG 1 cut(s) 1105
AfaI GTAC 3 cut(s) 1461, 2010, 2251
AfeI AGCGCT 1 cut(s) 1778
AfiI CCNNNNNNNGG 3 cut(s) 292, 860, 2201
AflIII ACRYGT 2 cut(s) 496, 1104
AhlI ACTAGT 2 cut(s) 547, 1811
AjnI CCWGG 1 cut(s) 1855
AjuI GAANNNNNNNTTGG 2 cut(s) 2028, 2060
AleI CACNNNNGTG 1 cut(s) 1337
AloI GAACNNNNNNTCC 2 cut(s) 1693, 1725
AluBI AGCT 8 cut(s) 173, 485, 721, 902, 1046, 1085, 1436, 2039
AluI AGCT 8 cut(s) 173, 485, 721, 902, 1046, 1085, 1436, 2039
Alw21I GWGCWC 2 cut(s) 487, 1942
Alw26I GTCTC 3 cut(s) 918, 941, 1857
Alw44I GTGCAC 1 cut(s) 1938
AlwI GGATC 5 cut(s) 82, 89, 746, 2235, 2248
AlwNI CAGNNNCTG 1 cut(s) 2168
Aor51HI AGCGCT 1 cut(s) 1778
AoxI GGCC 3 cut(s) 657, 842, 1996
ApaLI GTGCAC 1 cut(s) 1938
ApeKI GCWGC 7 cut(s) 718, 899, 959, 1007, 1085, 1910, 2216
ApoI RAATTY 4 cut(s) 1093, 1554, 1578, 2023
AseI ATTAAT 1 cut(s) 1476
Asp700I GAANNNNTTC 1 cut(s) 1035
AspLEI GCGC 3 cut(s) 358, 1779, 2333
AspS9I GGNCC 1 cut(s) 657
AsuC2I CCSGG 1 cut(s) 589
AsuHPI GGTGA 6 cut(s) 275, 516, 806, 1324, 1458, 2083
BaeGI GKGCMC 1 cut(s) 1942
BamHI GGATCC 1 cut(s) 2240
BanI GGYRCC 1 cut(s) 439
BanII GRGCYC 1 cut(s) 487
BarI GAAGNNNNNNTAC 2 cut(s) 61, 93
BbrPI CACGTG 1 cut(s) 1105
BbsI GAAGAC 1 cut(s) 989
Bbv12I GWGCWC 2 cut(s) 487, 1942
BbvI GCAGC 7 cut(s) 730, 911, 971, 994, 1072, 1922, 2228
BccI CCATC 3 cut(s) 232, 1059, 1643
BciT130I CCWGG 1 cut(s) 1857
BcnI CCSGG 1 cut(s) 589
BcoDI GTCTC 3 cut(s) 918, 941, 1857
BcuI ACTAGT 2 cut(s) 547, 1811
BfaI CTAG 6 cut(s) 480, 548, 1730, 1812, 1833, 2000
BfmI CTRYAG 4 cut(s) 120, 614, 1296, 1564
BfoI RGCGCY 1 cut(s) 1780
BfuAI ACCTGC 1 cut(s) 2059
BglII AGATCT 3 cut(s) 86, 124, 1622
BisI GCNGC 7 cut(s) 719, 900, 960, 1008, 1086, 1911, 2217
BlsI GCNGC 7 cut(s) 720, 901, 961, 1009, 1087, 1912, 2218
Bme1390I CCNGG 2 cut(s) 589, 1857
BmgT120I GGNCC 1 cut(s) 657
BmiI GGNNCC 6 cut(s) 441, 586, 658, 1805, 2242, 2382
BmrFI CCNGG 2 cut(s) 589, 1857
BmsI GCATC 9 cut(s) 226, 640, 751, 1124, 1162, 1347, 1440, 1910, 2401
BpiI GAAGAC 1 cut(s) 989
BplI GAGNNNNNCTC 2 cut(s) 2228, 2260
BpuEI CTTGAG 1 cut(s) 1202
BpuMI CCSGG 1 cut(s) 589
BsaAI YACGTR 1 cut(s) 1105
BsaJI CCNNGG 4 cut(s) 588, 1819, 1844, 1856
BsaWI WCCGGW 1 cut(s) 285
Bsc4I CCNNNNNNNGG 3 cut(s) 292, 860, 2201
Bse1I ACTGG 2 cut(s) 388, 1469
Bse3DI GCAATG 2 cut(s) 969, 1017
BseBI CCWGG 1 cut(s) 1857
BseDI CCNNGG 4 cut(s) 588, 1819, 1844, 1856
BseGI GGATG 3 cut(s) 736, 1599, 1901
BseLI CCNNNNNNNGG 3 cut(s) 292, 860, 2201
BseMI GCAATG 2 cut(s) 969, 1017
BseMII CTCAG 1 cut(s) 2192
BseNI ACTGG 2 cut(s) 388, 1469
BseSI GKGCMC 1 cut(s) 1942
BseXI GCAGC 7 cut(s) 730, 911, 971, 994, 1072, 1922, 2228
BseYI CCCAGC 1 cut(s) 653
BsgI GTGCAG 2 cut(s) 737, 918
BshFI GGCC 3 cut(s) 659, 844, 1998
BshNI GGYRCC 1 cut(s) 439
BsiHKAI GWGCWC 2 cut(s) 487, 1942
BsiSI CCGG 2 cut(s) 286, 588
BslFI GGGAC 1 cut(s) 507
BslI CCNNNNNNNGG 3 cut(s) 292, 860, 2201
BsmAI GTCTC 3 cut(s) 918, 941, 1857
BsmFI GGGAC 1 cut(s) 507
BsnI GGCC 3 cut(s) 659, 844, 1998
Bsp1286I GDGCHC 2 cut(s) 487, 1942
Bsp19I CCATGG 1 cut(s) 1819
BspACI CCGC 3 cut(s) 625, 2171, 2255
BspANI GGCC 3 cut(s) 659, 844, 1998
BspCNI CTCAG 1 cut(s) 2191
BspHI TCATGA 5 cut(s) 154, 375, 424, 1366, 1627
BspLI GGNNCC 6 cut(s) 441, 586, 658, 1805, 2242, 2382
BspMAI CTGCAG 3 cut(s) 124, 1300, 1568
BspMI ACCTGC 1 cut(s) 2059
BspPI GGATC 5 cut(s) 82, 89, 746, 2235, 2248
BspT107I GGYRCC 1 cut(s) 439
BsrDI GCAATG 2 cut(s) 969, 1017
BsrI ACTGG 2 cut(s) 388, 1469
BssECI CCNNGG 4 cut(s) 588, 1819, 1844, 1856
BssNAI GTATAC 1 cut(s) 1313
BssT1I CCWWGG 2 cut(s) 1819, 1844
Bst1107I GTATAC 1 cut(s) 1313
Bst2UI CCWGG 1 cut(s) 1857
Bst4CI ACNGT 5 cut(s) 200, 306, 541, 1459, 2405
Bst6I CTCTTC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 1907
BstBAI YACGTR 1 cut(s) 1105
BstC8I GCNNGC 2 cut(s) 1497, 2169
BstDEI CTNAG 3 cut(s) 1139, 2064, 2178
BstDSI CCRYGG 1 cut(s) 1819
BstEII GGTNACC 2 cut(s) 281, 522
BstF5I GGATG 3 cut(s) 736, 1599, 1901
BstH2I RGCGCY 1 cut(s) 1780
BstHHI GCGC 3 cut(s) 358, 1779, 2333
BstMAI GTCTC 3 cut(s) 918, 941, 1857
BstMWI GCNNNNNNNGC 4 cut(s) 170, 1013, 1878, 1907
BstNI CCWGG 1 cut(s) 1857
BstNSI RCATGY 4 cut(s) 457, 500, 1938, 2359
BstPI GGTNACC 2 cut(s) 281, 522
BstSCI CCNGG 2 cut(s) 587, 1855
BstSFI CTRYAG 4 cut(s) 120, 614, 1296, 1564
BstSLI GKGCMC 1 cut(s) 1942
BstV1I GCAGC 7 cut(s) 730, 911, 971, 994, 1072, 1922, 2228
BstV2I GAAGAC 1 cut(s) 989
BstX2I RGATCY 5 cut(s) 74, 86, 124, 1622, 2240
BstYI RGATCY 5 cut(s) 74, 86, 124, 1622, 2240
BstZ17I GTATAC 1 cut(s) 1313
BsuRI GGCC 3 cut(s) 659, 844, 1998
BtgI CCRYGG 1 cut(s) 1819
BtsCI GGATG 3 cut(s) 736, 1599, 1901
BtsI GCAGTG 2 cut(s) 1293, 1573
BtsIMutI CAGTG 5 cut(s) 546, 720, 1293, 1573, 2401
BveI ACCTGC 1 cut(s) 2059
Cac8I GCNNGC 2 cut(s) 1497, 2169
CaiI CAGNNNCTG 1 cut(s) 2168
CciI TCATGA 5 cut(s) 154, 375, 424, 1366, 1627
CfoI GCGC 3 cut(s) 358, 1779, 2333
Cfr13I GGNCC 1 cut(s) 657
Csp6I GTAC 3 cut(s) 1460, 2009, 2250
CviQI GTAC 3 cut(s) 1460, 2009, 2250
DdeI CTNAG 3 cut(s) 1139, 2064, 2178
Eam1104I CTCTTC 1 cut(s) 105
EarI CTCTTC 1 cut(s) 105
EciI GGCGGA 1 cut(s) 2244
Ecl136II GAGCTC 1 cut(s) 485
Eco130I CCWWGG 2 cut(s) 1819, 1844
Eco24I GRGCYC 1 cut(s) 487
Eco47III AGCGCT 1 cut(s) 1778
Eco53kI GAGCTC 1 cut(s) 485
Eco57I CTGAAG 1 cut(s) 1062
Eco72I CACGTG 1 cut(s) 1105
Eco91I GGTNACC 2 cut(s) 281, 522
EcoICRI GAGCTC 1 cut(s) 485
EcoO65I GGTNACC 2 cut(s) 281, 522
EcoRI GAATTC 1 cut(s) 1554
EcoRII CCWGG 1 cut(s) 1855
EcoT14I CCWWGG 2 cut(s) 1819, 1844
EcoT22I ATGCAT 4 cut(s) 1117, 1177, 1720, 2361
EcoT38I GRGCYC 1 cut(s) 487
ErhI CCWWGG 2 cut(s) 1819, 1844
FalI AAGNNNNNCTT 6 cut(s) 244, 276, 564, 596, 2308, 2340
FaqI GGGAC 1 cut(s) 507
FauNDI CATATG 2 cut(s) 166, 360
FblI GTMKAC 2 cut(s) 1312, 2155
Fnu4HI GCNGC 7 cut(s) 719, 900, 960, 1008, 1086, 1911, 2217
FokI GGATG 3 cut(s) 743, 1606, 1888
FriOI GRGCYC 1 cut(s) 487
Fsp4HI GCNGC 7 cut(s) 719, 900, 960, 1008, 1086, 1911, 2217
FspBI CTAG 6 cut(s) 480, 548, 1730, 1812, 1833, 2000
GlaI GCGC 3 cut(s) 357, 1778, 2332
GluI GCNGC 7 cut(s) 719, 900, 960, 1008, 1086, 1911, 2217
GsaI CCCAGC 1 cut(s) 657
HaeII RGCGCY 1 cut(s) 1780
HaeIII GGCC 3 cut(s) 659, 844, 1998
HapII CCGG 2 cut(s) 286, 588
HhaI GCGC 3 cut(s) 358, 1779, 2333
Hin6I GCGC 3 cut(s) 356, 1777, 2331
HinP1I GCGC 3 cut(s) 356, 1777, 2331
HindIII AAGCTT 1 cut(s) 2037
HinfI GANTC 6 cut(s) 138, 577, 926, 1530, 1850, 2429
HpaII CCGG 2 cut(s) 286, 588
HphI GGTGA 6 cut(s) 275, 516, 806, 1324, 1458, 2083
Hpy166II GTNNAC 5 cut(s) 371, 1313, 1689, 1940, 2156
Hpy188I TCNGA 3 cut(s) 825, 2029, 2181
Hpy8I GTNNAC 5 cut(s) 371, 1313, 1689, 1940, 2156
Hpy99I CGWCG 2 cut(s) 1419, 2274
HpyAV CCTTC 4 cut(s) 799, 1473, 2024, 2394
HpyCH4III ACNGT 5 cut(s) 200, 306, 541, 1459, 2405
HpyCH4IV ACGT 4 cut(s) 766, 1104, 2113, 2269
HpyF10VI GCNNNNNNNGC 4 cut(s) 170, 1013, 1878, 1907
HpyF3I CTNAG 3 cut(s) 1139, 2064, 2178
HpySE526I ACGT 4 cut(s) 766, 1104, 2113, 2269
HspAI GCGC 3 cut(s) 356, 1777, 2331
LmnI GCTCC 1 cut(s) 1803
Lsp1109I GCAGC 7 cut(s) 730, 911, 971, 994, 1072, 1922, 2228
LweI GCATC 9 cut(s) 226, 640, 751, 1124, 1162, 1347, 1440, 1910, 2401
MaeI CTAG 6 cut(s) 480, 548, 1730, 1812, 1833, 2000
MaeII ACGT 4 cut(s) 766, 1104, 2113, 2269
MaeIII GTNAC 5 cut(s) 68, 256, 281, 522, 1814
MboII GAAGA 9 cut(s) 62, 69, 122, 701, 994, 1175, 1750, 1928, 1996
MflI RGATCY 5 cut(s) 74, 86, 124, 1622, 2240
MhlI GDGCHC 2 cut(s) 487, 1942
MlyI GAGTC 4 cut(s) 920, 1524, 1859, 2438
MmeI TCCRAC 1 cut(s) 2026
Mph1103I ATGCAT 4 cut(s) 1117, 1177, 1720, 2361
MroXI GAANNNNTTC 1 cut(s) 1035
MslI CAYNNNNRTG 3 cut(s) 159, 423, 1337
MspI CCGG 2 cut(s) 286, 588
MspR9I CCNGG 2 cut(s) 589, 1857
MvaI CCWGG 1 cut(s) 1857
MwoI GCNNNNNNNGC 4 cut(s) 170, 1013, 1878, 1907
NciI CCSGG 1 cut(s) 589
NcoI CCATGG 1 cut(s) 1819
NdeI CATATG 2 cut(s) 166, 360
NlaIV GGNNCC 6 cut(s) 441, 586, 658, 1805, 2242, 2382
NmuCI GTSAC 2 cut(s) 281, 522
NsiI ATGCAT 4 cut(s) 1117, 1177, 1720, 2361
NspI RCATGY 4 cut(s) 457, 500, 1938, 2359
OliI CACNNNNGTG 1 cut(s) 1337
PagI TCATGA 5 cut(s) 154, 375, 424, 1366, 1627
PaqCI CACCTGC 1 cut(s) 2059
PciI ACATGT 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 1035
PfeI GAWTC 2 cut(s) 138, 577
PflMI CCANNNNNTGG 1 cut(s) 860
PkrI GCNGC 7 cut(s) 720, 901, 961, 1009, 1087, 1912, 2218
PleI GAGTC 4 cut(s) 920, 1524, 1858, 2437
PmaCI CACGTG 1 cut(s) 1105
PmlI CACGTG 1 cut(s) 1105
PpsI GAGTC 4 cut(s) 920, 1524, 1858, 2437
Ppu21I YACGTR 1 cut(s) 1105
PscI ACATGT 1 cut(s) 496
PshBI ATTAAT 1 cut(s) 1476
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 487
Psp6I CCWGG 1 cut(s) 1855
PspCI CACGTG 1 cut(s) 1105
PspEI GGTNACC 2 cut(s) 281, 522
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 1 cut(s) 1855
PspN4I GGNNCC 6 cut(s) 441, 586, 658, 1805, 2242, 2382
PspPI GGNCC 1 cut(s) 657
PstI CTGCAG 3 cut(s) 124, 1300, 1568
PstNI CAGNNNCTG 1 cut(s) 2168
PsuI RGATCY 5 cut(s) 74, 86, 124, 1622, 2240
RsaI GTAC 3 cut(s) 1461, 2010, 2251
RsaNI GTAC 3 cut(s) 1460, 2009, 2250
RseI CAYNNNNRTG 3 cut(s) 159, 423, 1337
SacI GAGCTC 1 cut(s) 487
SatI GCNGC 7 cut(s) 719, 900, 960, 1008, 1086, 1911, 2217
Sau96I GGNCC 1 cut(s) 657
SchI GAGTC 4 cut(s) 920, 1524, 1859, 2438
ScrFI CCNGG 2 cut(s) 589, 1857
SduI GDGCHC 2 cut(s) 487, 1942
SfaNI GCATC 9 cut(s) 226, 640, 751, 1124, 1162, 1347, 1440, 1910, 2401
SfcI CTRYAG 4 cut(s) 120, 614, 1296, 1564
SmiMI CAYNNNNRTG 3 cut(s) 159, 423, 1337
SmlI CTYRAG 1 cut(s) 1217
SmoI CTYRAG 1 cut(s) 1217
SpeI ACTAGT 2 cut(s) 547, 1811
SsiI CCGC 3 cut(s) 625, 2171, 2255
SspI AATATT 2 cut(s) 1026, 1402
SspMI CTAG 6 cut(s) 480, 548, 1730, 1812, 1833, 2000
SstI GAGCTC 1 cut(s) 487
StyD4I CCNGG 2 cut(s) 587, 1855
StyI CCWWGG 2 cut(s) 1819, 1844
TaaI ACNGT 5 cut(s) 200, 306, 541, 1459, 2405
TaiI ACGT 4 cut(s) 769, 1107, 2116, 2272
TaqI TCGA 4 cut(s) 141, 604, 1414, 2387
TfiI GAWTC 2 cut(s) 138, 577
TscAI CASTG 5 cut(s) 546, 720, 1300, 1573, 2408
TseFI GTSAC 2 cut(s) 281, 522
TseI GCWGC 7 cut(s) 718, 899, 959, 1007, 1085, 1910, 2216
Tsp45I GTSAC 2 cut(s) 281, 522
TspDTI ATGAA 9 cut(s) 392, 461, 1100, 1170, 1263, 1293, 1697, 1997, 2006
TspGWI ACGGA 1 cut(s) 87
TspRI CASTG 5 cut(s) 546, 720, 1300, 1573, 2408
Van91I CCANNNNNTGG 1 cut(s) 860
VneI GTGCAC 1 cut(s) 1938
VspI ATTAAT 1 cut(s) 1476
XapI RAATTY 4 cut(s) 1093, 1554, 1578, 2023
XbaI TCTAGA 1 cut(s) 479
XceI RCATGY 4 cut(s) 457, 500, 1938, 2359
XmiI GTMKAC 2 cut(s) 1312, 2155
XmnI GAANNNNTTC 1 cut(s) 1035
XspI CTAG 6 cut(s) 480, 548, 1730, 1812, 1833, 2000
Zsp2I ATGCAT 4 cut(s) 1117, 1177, 1720, 2361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.