Belongs to the class-I aminoacyl-tRNA synthetase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| tRNA-synt_1 | PF00133 | 1 - 496 | 1.6e-108 | tRNA synthetases class I (I, L, M and V) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 55 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 634 |
| AccI | GTMKAC | 2 cut(s) | 932, 1459 |
| AccII | CGCG | 1 cut(s) | 150 |
| AciI | CCGC | 3 cut(s) | 25, 858, 1329 |
| AclWI | GGATC | 6 cut(s) | 75, 548, 593, 1148, 1161, 1415 |
| AcoI | YGGCCR | 2 cut(s) | 474, 1214 |
| AcsI | RAATTY | 8 cut(s) | 155, 413, 543, 689, 792, 1135, 1483, 1545 |
| AcuI | CTGAAG | 1 cut(s) | 1179 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 223, 448, 514, 563, 634 |
| AgsI | TTSAA | 5 cut(s) | 101, 513, 713, 1142, 1265 |
| AjnI | CCWGG | 4 cut(s) | 58, 391, 633, 1128 |
| AleI | CACNNNNGTG | 1 cut(s) | 485 |
| AluBI | AGCT | 4 cut(s) | 109, 910, 1471, 1505 |
| AluI | AGCT | 4 cut(s) | 109, 910, 1471, 1505 |
| Alw21I | GWGCWC | 1 cut(s) | 200 |
| Alw26I | GTCTC | 2 cut(s) | 758, 1513 |
| AlwI | GGATC | 6 cut(s) | 75, 548, 593, 1148, 1161, 1415 |
| Ama87I | CYCGRG | 1 cut(s) | 717 |
| AoxI | GGCC | 2 cut(s) | 474, 1214 |
| ApeKI | GCWGC | 2 cut(s) | 307, 855 |
| ApoI | RAATTY | 8 cut(s) | 155, 413, 543, 689, 792, 1135, 1483, 1545 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 509, 541, 777, 809 |
| AseI | ATTAAT | 2 cut(s) | 1061, 1145 |
| AspLEI | GCGC | 1 cut(s) | 627 |
| AspS9I | GGNCC | 1 cut(s) | 243 |
| AsuC2I | CCSGG | 1 cut(s) | 76 |
| AsuHPI | GGTGA | 3 cut(s) | 473, 995, 1049 |
| AvaI | CYCGRG | 1 cut(s) | 717 |
| AvaII | GGWCC | 1 cut(s) | 243 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 388, 421 |
| BalI | TGGCCA | 2 cut(s) | 476, 1216 |
| BamHI | GGATCC | 1 cut(s) | 1153 |
| BanI | GGYRCC | 1 cut(s) | 55 |
| Bbv12I | GWGCWC | 1 cut(s) | 200 |
| BbvI | GCAGC | 2 cut(s) | 294, 867 |
| BccI | CCATC | 4 cut(s) | 256, 656, 945, 1068 |
| BceAI | ACGGC | 1 cut(s) | 269 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 200, 234 |
| BciT130I | CCWGG | 4 cut(s) | 60, 393, 635, 1130 |
| BciVI | GTATCC | 1 cut(s) | 389 |
| BcnI | CCSGG | 1 cut(s) | 76 |
| BcoDI | GTCTC | 2 cut(s) | 758, 1513 |
| BfaI | CTAG | 5 cut(s) | 483, 801, 1086, 1116, 1313 |
| BfmI | CTRYAG | 2 cut(s) | 328, 1254 |
| BfoI | RGCGCY | 1 cut(s) | 628 |
| BfuI | GTATCC | 1 cut(s) | 389 |
| BglII | AGATCT | 1 cut(s) | 1231 |
| BisI | GCNGC | 3 cut(s) | 308, 856, 1330 |
| BlsI | GCNGC | 3 cut(s) | 309, 857, 1331 |
| Bme1390I | CCNGG | 5 cut(s) | 60, 76, 393, 635, 1130 |
| Bme18I | GGWCC | 1 cut(s) | 243 |
| BmeT110I | CYCGRG | 1 cut(s) | 717 |
| BmgT120I | GGNCC | 1 cut(s) | 243 |
| BmiI | GGNNCC | 5 cut(s) | 57, 245, 390, 822, 1155 |
| BmrFI | CCNGG | 5 cut(s) | 60, 76, 393, 635, 1130 |
| BmrI | ACTGGG | 1 cut(s) | 1278 |
| BmsI | GCATC | 8 cut(s) | 771, 871, 987, 1057, 1111, 1366, 1480, 1555 |
| BmuI | ACTGGG | 1 cut(s) | 1278 |
| Bpu10I | CCTNAGC | 1 cut(s) | 165 |
| BpuEI | CTTGAG | 4 cut(s) | 932, 967, 977, 1089 |
| BpuMI | CCSGG | 1 cut(s) | 76 |
| Bsa29I | ATCGAT | 1 cut(s) | 360 |
| BsaI | GGTCTC | 1 cut(s) | 758 |
| BsaJI | CCNNGG | 4 cut(s) | 1129, 1381, 1404, 1494 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 223, 448, 514, 563, 634 |
| Bse1I | ACTGG | 2 cut(s) | 574, 1273 |
| BseBI | CCWGG | 4 cut(s) | 60, 393, 635, 1130 |
| BseCI | ATCGAT | 1 cut(s) | 360 |
| BseDI | CCNNGG | 4 cut(s) | 1129, 1381, 1404, 1494 |
| BseGI | GGATG | 3 cut(s) | 271, 918, 1495 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 223, 448, 514, 563, 634 |
| BseMII | CTCAG | 2 cut(s) | 374, 1524 |
| BseNI | ACTGG | 2 cut(s) | 574, 1273 |
| BseRI | GAGGAG | 1 cut(s) | 692 |
| BseXI | GCAGC | 2 cut(s) | 294, 867 |
| BseYI | CCCAGC | 1 cut(s) | 589 |
| BsgI | GTGCAG | 1 cut(s) | 1581 |
| Bsh1236I | CGCG | 1 cut(s) | 150 |
| BshFI | GGCC | 2 cut(s) | 476, 1216 |
| BshNI | GGYRCC | 1 cut(s) | 55 |
| BshVI | ATCGAT | 1 cut(s) | 360 |
| BsiHKAI | GWGCWC | 1 cut(s) | 200 |
| BsiHKCI | CYCGRG | 1 cut(s) | 717 |
| BsiSI | CCGG | 2 cut(s) | 75, 1538 |
| BslFI | GGGAC | 2 cut(s) | 229, 580 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 223, 448, 514, 563, 634 |
| BsmAI | GTCTC | 2 cut(s) | 758, 1513 |
| BsmFI | GGGAC | 2 cut(s) | 229, 580 |
| BsmI | GAATGC | 1 cut(s) | 705 |
| BsnI | GGCC | 2 cut(s) | 476, 1216 |
| Bso31I | GGTCTC | 1 cut(s) | 758 |
| BsoBI | CYCGRG | 1 cut(s) | 717 |
| Bsp1286I | GDGCHC | 1 cut(s) | 200 |
| Bsp143I | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| Bsp19I | CCATGG | 1 cut(s) | 1381 |
| Bsp68I | TCGCGA | 1 cut(s) | 150 |
| BspACI | CCGC | 3 cut(s) | 25, 858, 1329 |
| BspANI | GGCC | 2 cut(s) | 476, 1216 |
| BspCNI | CTCAG | 2 cut(s) | 375, 1523 |
| BspDI | ATCGAT | 1 cut(s) | 360 |
| BspFNI | CGCG | 1 cut(s) | 150 |
| BspHI | TCATGA | 1 cut(s) | 967 |
| BspLI | GGNNCC | 5 cut(s) | 57, 245, 390, 822, 1155 |
| BspMAI | CTGCAG | 1 cut(s) | 1258 |
| BspPI | GGATC | 6 cut(s) | 75, 548, 593, 1148, 1161, 1415 |
| BspT107I | GGYRCC | 1 cut(s) | 55 |
| BspTNI | GGTCTC | 1 cut(s) | 758 |
| BsrI | ACTGG | 2 cut(s) | 574, 1273 |
| BssECI | CCNNGG | 4 cut(s) | 1129, 1381, 1404, 1494 |
| BssMI | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| BssNAI | GTATAC | 1 cut(s) | 933 |
| BssT1I | CCWWGG | 3 cut(s) | 1381, 1404, 1494 |
| Bst1107I | GTATAC | 1 cut(s) | 933 |
| Bst2UI | CCWGG | 4 cut(s) | 60, 393, 635, 1130 |
| Bst4CI | ACNGT | 3 cut(s) | 404, 1007, 1451 |
| Bst6I | CTCTTC | 2 cut(s) | 941, 1092 |
| BstC8I | GCNNGC | 3 cut(s) | 501, 873, 1214 |
| BstDEI | CTNAG | 4 cut(s) | 165, 383, 1510, 1584 |
| BstDSI | CCRYGG | 1 cut(s) | 1381 |
| BstEII | GGTNACC | 1 cut(s) | 1001 |
| BstF5I | GGATG | 3 cut(s) | 271, 918, 1495 |
| BstFNI | CGCG | 1 cut(s) | 150 |
| BstH2I | RGCGCY | 1 cut(s) | 628 |
| BstHHI | GCGC | 1 cut(s) | 627 |
| BstKTI | GATC | 7 cut(s) | 70, 556, 601, 918, 1156, 1234, 1423 |
| BstMAI | GTCTC | 2 cut(s) | 758, 1513 |
| BstMBI | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 80, 313, 722, 804, 881, 1121 |
| BstNI | CCWGG | 4 cut(s) | 60, 393, 635, 1130 |
| BstPI | GGTNACC | 1 cut(s) | 1001 |
| BstSCI | CCNGG | 5 cut(s) | 58, 74, 391, 633, 1128 |
| BstSFI | CTRYAG | 2 cut(s) | 328, 1254 |
| BstUI | CGCG | 1 cut(s) | 150 |
| BstV1I | GCAGC | 2 cut(s) | 294, 867 |
| BstX2I | RGATCY | 2 cut(s) | 1153, 1231 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 487 |
| BstYI | RGATCY | 2 cut(s) | 1153, 1231 |
| BstZ17I | GTATAC | 1 cut(s) | 933 |
| Bsu15I | ATCGAT | 1 cut(s) | 360 |
| BsuI | GTATCC | 1 cut(s) | 389 |
| BsuRI | GGCC | 2 cut(s) | 476, 1216 |
| BsuTUI | ATCGAT | 1 cut(s) | 360 |
| BtgI | CCRYGG | 1 cut(s) | 1381 |
| BtsCI | GGATG | 3 cut(s) | 271, 918, 1495 |
| BtsI | GCAGTG | 1 cut(s) | 732 |
| BtsIMutI | CAGTG | 1 cut(s) | 732 |
| BtuMI | TCGCGA | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 3 cut(s) | 501, 873, 1214 |
| CciI | TCATGA | 1 cut(s) | 967 |
| CfoI | GCGC | 1 cut(s) | 627 |
| Cfr13I | GGNCC | 1 cut(s) | 243 |
| ClaI | ATCGAT | 1 cut(s) | 360 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 72, 107 |
| DdeI | CTNAG | 4 cut(s) | 165, 383, 1510, 1584 |
| DpnI | GATC | 7 cut(s) | 69, 555, 600, 917, 1155, 1233, 1422 |
| DpnII | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| DraI | TTTAAA | 1 cut(s) | 760 |
| EaeI | YGGCCR | 2 cut(s) | 474, 1214 |
| Eam1104I | CTCTTC | 2 cut(s) | 941, 1092 |
| EarI | CTCTTC | 2 cut(s) | 941, 1092 |
| EciI | GGCGGA | 1 cut(s) | 40 |
| Eco130I | CCWWGG | 3 cut(s) | 1381, 1404, 1494 |
| Eco31I | GGTCTC | 1 cut(s) | 758 |
| Eco47I | GGWCC | 1 cut(s) | 243 |
| Eco57I | CTGAAG | 1 cut(s) | 1179 |
| Eco88I | CYCGRG | 1 cut(s) | 717 |
| Eco91I | GGTNACC | 1 cut(s) | 1001 |
| EcoO65I | GGTNACC | 1 cut(s) | 1001 |
| EcoRII | CCWGG | 4 cut(s) | 58, 391, 633, 1128 |
| EcoT14I | CCWWGG | 3 cut(s) | 1381, 1404, 1494 |
| EcoT22I | ATGCAT | 1 cut(s) | 1126 |
| ErhI | CCWWGG | 3 cut(s) | 1381, 1404, 1494 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 740, 772, 1517, 1549 |
| FaqI | GGGAC | 2 cut(s) | 229, 580 |
| FblI | GTMKAC | 2 cut(s) | 932, 1459 |
| Fnu4HI | GCNGC | 3 cut(s) | 308, 856, 1330 |
| FokI | GGATG | 3 cut(s) | 278, 905, 1502 |
| Fsp4HI | GCNGC | 3 cut(s) | 308, 856, 1330 |
| FspBI | CTAG | 5 cut(s) | 483, 801, 1086, 1116, 1313 |
| GlaI | GCGC | 1 cut(s) | 626 |
| GluI | GCNGC | 3 cut(s) | 308, 856, 1330 |
| GsaI | CCCAGC | 1 cut(s) | 593 |
| HaeII | RGCGCY | 1 cut(s) | 628 |
| HaeIII | GGCC | 2 cut(s) | 476, 1216 |
| HapII | CCGG | 2 cut(s) | 75, 1538 |
| HhaI | GCGC | 1 cut(s) | 627 |
| Hin6I | GCGC | 1 cut(s) | 625 |
| HinP1I | GCGC | 1 cut(s) | 625 |
| HincII | GTYRAC | 1 cut(s) | 426 |
| HindII | GTYRAC | 1 cut(s) | 426 |
| HindIII | AAGCTT | 3 cut(s) | 107, 908, 1469 |
| HinfI | GANTC | 1 cut(s) | 1369 |
| HpaI | GTTAAC | 1 cut(s) | 426 |
| HpaII | CCGG | 2 cut(s) | 75, 1538 |
| HphI | GGTGA | 3 cut(s) | 473, 995, 1049 |
| Hpy166II | GTNNAC | 3 cut(s) | 426, 933, 1460 |
| Hpy188I | TCNGA | 4 cut(s) | 538, 1251, 1489, 1513 |
| Hpy8I | GTNNAC | 3 cut(s) | 426, 933, 1460 |
| Hpy99I | CGWCG | 1 cut(s) | 222 |
| HpyAV | CCTTC | 7 cut(s) | 446, 515, 742, 1028, 1448, 1511, 1522 |
| HpyCH4III | ACNGT | 3 cut(s) | 404, 1007, 1451 |
| HpyCH4IV | ACGT | 2 cut(s) | 706, 1387 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 80, 313, 722, 804, 881, 1121 |
| HpyF3I | CTNAG | 4 cut(s) | 165, 383, 1510, 1584 |
| HpySE526I | ACGT | 2 cut(s) | 706, 1387 |
| HspAI | GCGC | 1 cut(s) | 625 |
| KspAI | GTTAAC | 1 cut(s) | 426 |
| Kzo9I | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| LmnI | GCTCC | 1 cut(s) | 195 |
| Lsp1109I | GCAGC | 2 cut(s) | 294, 867 |
| LweI | GCATC | 8 cut(s) | 771, 871, 987, 1057, 1111, 1366, 1480, 1555 |
| MaeI | CTAG | 5 cut(s) | 483, 801, 1086, 1116, 1313 |
| MaeII | ACGT | 2 cut(s) | 706, 1387 |
| MaeIII | GTNAC | 3 cut(s) | 286, 727, 1001 |
| MalI | GATC | 7 cut(s) | 69, 555, 600, 917, 1155, 1233, 1422 |
| MboI | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| MflI | RGATCY | 2 cut(s) | 1153, 1231 |
| MhlI | GDGCHC | 1 cut(s) | 200 |
| MlsI | TGGCCA | 2 cut(s) | 476, 1216 |
| MluNI | TGGCCA | 2 cut(s) | 476, 1216 |
| MmeI | TCCRAC | 1 cut(s) | 1274 |
| MnlI | CCTC | 8 cut(s) | 145, 286, 378, 442, 670, 673, 1093, 1471 |
| Mox20I | TGGCCA | 2 cut(s) | 476, 1216 |
| Mph1103I | ATGCAT | 1 cut(s) | 1126 |
| MscI | TGGCCA | 2 cut(s) | 476, 1216 |
| MseI | TTAA | 8 cut(s) | 128, 425, 612, 645, 759, 849, 1061, 1145 |
| MslI | CAYNNNNRTG | 2 cut(s) | 53, 485 |
| Msp20I | TGGCCA | 2 cut(s) | 476, 1216 |
| MspA1I | CMGCKG | 1 cut(s) | 858 |
| MspI | CCGG | 2 cut(s) | 75, 1538 |
| MspR9I | CCNGG | 5 cut(s) | 60, 76, 393, 635, 1130 |
| Mva1269I | GAATGC | 1 cut(s) | 705 |
| MvaI | CCWGG | 4 cut(s) | 60, 393, 635, 1130 |
| MvnI | CGCG | 1 cut(s) | 150 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 80, 313, 722, 804, 881, 1121 |
| NciI | CCSGG | 1 cut(s) | 76 |
| NcoI | CCATGG | 1 cut(s) | 1381 |
| NdeII | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| NlaIV | GGNNCC | 5 cut(s) | 57, 245, 390, 822, 1155 |
| NmeAIII | GCCGAG | 1 cut(s) | 319 |
| NmuCI | GTSAC | 3 cut(s) | 286, 727, 1001 |
| NruI | TCGCGA | 1 cut(s) | 150 |
| NsiI | ATGCAT | 1 cut(s) | 1126 |
| OliI | CACNNNNGTG | 1 cut(s) | 485 |
| PagI | TCATGA | 1 cut(s) | 967 |
| PctI | GAATGC | 1 cut(s) | 705 |
| PfeI | GAWTC | 1 cut(s) | 1369 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 634 |
| PfoI | TCCNGGA | 1 cut(s) | 391 |
| PkrI | GCNGC | 3 cut(s) | 309, 857, 1331 |
| PshBI | ATTAAT | 2 cut(s) | 1061, 1145 |
| Psp6I | CCWGG | 4 cut(s) | 58, 391, 633, 1128 |
| PspEI | GGTNACC | 1 cut(s) | 1001 |
| PspFI | CCCAGC | 1 cut(s) | 589 |
| PspGI | CCWGG | 4 cut(s) | 58, 391, 633, 1128 |
| PspN4I | GGNNCC | 5 cut(s) | 57, 245, 390, 822, 1155 |
| PspPI | GGNCC | 1 cut(s) | 243 |
| PstI | CTGCAG | 1 cut(s) | 1258 |
| PsuI | RGATCY | 2 cut(s) | 1153, 1231 |
| RruI | TCGCGA | 1 cut(s) | 150 |
| RseI | CAYNNNNRTG | 2 cut(s) | 53, 485 |
| SaqAI | TTAA | 8 cut(s) | 128, 425, 612, 645, 759, 849, 1061, 1145 |
| SatI | GCNGC | 3 cut(s) | 308, 856, 1330 |
| Sau3AI | GATC | 7 cut(s) | 67, 553, 598, 915, 1153, 1231, 1420 |
| Sau96I | GGNCC | 1 cut(s) | 243 |
| ScrFI | CCNGG | 5 cut(s) | 60, 76, 393, 635, 1130 |
| SduI | GDGCHC | 1 cut(s) | 200 |
| SfaNI | GCATC | 8 cut(s) | 771, 871, 987, 1057, 1111, 1366, 1480, 1555 |
| SfcI | CTRYAG | 2 cut(s) | 328, 1254 |
| SinI | GGWCC | 1 cut(s) | 243 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 53, 485 |
| SmlI | CTYRAG | 4 cut(s) | 911, 956, 982, 1104 |
| SmoI | CTYRAG | 4 cut(s) | 911, 956, 982, 1104 |
| SsiI | CCGC | 3 cut(s) | 25, 858, 1329 |
| SspMI | CTAG | 5 cut(s) | 483, 801, 1086, 1116, 1313 |
| StyD4I | CCNGG | 5 cut(s) | 58, 74, 391, 633, 1128 |
| StyI | CCWWGG | 3 cut(s) | 1381, 1404, 1494 |
| TaaI | ACNGT | 3 cut(s) | 404, 1007, 1451 |
| TaiI | ACGT | 2 cut(s) | 709, 1390 |
| TaqI | TCGA | 1 cut(s) | 360 |
| TauI | GCSGC | 1 cut(s) | 1332 |
| TfiI | GAWTC | 1 cut(s) | 1369 |
| Tru1I | TTAA | 8 cut(s) | 128, 425, 612, 645, 759, 849, 1061, 1145 |
| Tru9I | TTAA | 8 cut(s) | 128, 425, 612, 645, 759, 849, 1061, 1145 |
| TscAI | CASTG | 1 cut(s) | 732 |
| TseFI | GTSAC | 3 cut(s) | 286, 727, 1001 |
| TseI | GCWGC | 2 cut(s) | 307, 855 |
| Tsp45I | GTSAC | 3 cut(s) | 286, 727, 1001 |
| TspDTI | ATGAA | 6 cut(s) | 420, 555, 912, 956, 1047, 1107 |
| TspGWI | ACGGA | 3 cut(s) | 206, 1192, 1477 |
| TspRI | CASTG | 1 cut(s) | 732 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 1 cut(s) | 243 |
| VspI | ATTAAT | 2 cut(s) | 1061, 1145 |
| XapI | RAATTY | 8 cut(s) | 155, 413, 543, 689, 792, 1135, 1483, 1545 |
| XbaI | TCTAGA | 1 cut(s) | 800 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 484, 511 |
| XmiI | GTMKAC | 2 cut(s) | 932, 1459 |
| XspI | CTAG | 5 cut(s) | 483, 801, 1086, 1116, 1313 |
| Zsp2I | ATGCAT | 1 cut(s) | 1126 |