Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000285

Physical Location & Seq

Genomic Coordinates Reverse (-)

47366418 .. 47369259

Gene Structure 2842 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGGCTTGCCACAAAGTAGCAGCTGCTCCCTTTCAACTTCTTTCTCTTGTTAGTTTCCTTCTTTTCTTAAATCCATGTTCTTCTATTTTCCTTCAAGCCACAACAATATTTGCCTACTCCAATACAGTCAATGATGAGAGGGCCAATGTGGCTTGCATTGAGGAAGAGAGGAAGGCCCTCCTTGAATTCAAGCAAGGTCTTCAAGATCCTATGCCTGCGCTTCATTCTTGGGTTGGCAAAGACTGCTGCAACTGGCATGGCATAGTCTGCAACAACCAAACAGGTAACATCATCGAGCTTCGTCTTTTGGATACACAAATCTCTGGTACACTTTCAATGTCAATAGGCAGTCTTTCGGATTTGGAGACCTTGATTCTTTTCAACAATTCGTTCTCTGGCCCACTTCCGACATCGATCGAAAATCTTTCACATTTGAGGACCATGAACCTTTCTAGGAACTCAATTTCCGGTCCACTTCCGACATCGATCGGAAATCTTTCAAATTTGCAGAACTTGGACCTTTCTAGGAACTCAATGTCCGGTCCACTTCCGACATCGATCGGAAGTCTTTCAAATTTGCAGACCCTGGACCTTTCCAGGAACTCAATTTCCGGTCCACTTCCGACATCGATCGGAAGTCTTTCGAATTTGCAGACCCTGGACCTTTATTCAAACTCAATTTCCGGTCCACTTCCGACATCGATCGGAAGTCTTTCGAATTTGCAGACCCTGGACCTTTCTTCAAACTCAATTTCCGGTCCACTTCCGACATCGATCGGAAGTCTTTCGAATTTGCAGACCCTGGACCTTTCTTCAAACTCAATTTCCTGTCCACTTCCGACATCGATCGGAAATCTTTCGAATTTGCAGGCCCTGTACCTTTCTTCAAACTCAATTTCCGGTCCACTACCGACATGGATTGGAAGTCTTTCAAATTTGCAGAACTTGGAGCTTGCCGACAACTCAAAAATGAATGGAACTATTCCAGAAAGCATCGGACAACTTAGAGAGTTAGAGTACTTGTATCTCTACGGTTGTTCATGGGAAGGCTTTATATCCGAAAATCATTTTCAGAACACTAGCAGATTGGATACGTTTTATTTATCCAGCGAGGCATCCAACTCTTTGGTTTTCAACGTCAGTCATGACTGGATTCCTATCTTCAATCTTACGAATCTTTATATCACGGATTGTAAACTAATGGATACTGCTTTTCCAGAGTGGCTCAAAAGTCAAAAATTCCTCAATTTCTTAATTCTTCAGAGACTCGGAATTTCAGATACAATACCCGATTGGTTTTGGAGATTTTCACCATTCCTTCAGGGTGTGAGTTTATCTCATAACCAGTTGAGAGGAAACCTTCCCAAGTCTGTGAGTTCTCCTCTTCAATACGTTATTTTGAAAAATAACAGTTTGGTAGGGTGCCTTCCATTTTGGCCAAATGTAACACAACTAAGCTTGGCAAACAATAAATTTTCAGGGCCTATAAACATTGGCCACGAGATGTCAGAGTTGGAGTTTCTTGATCTCTCAAGGAATTATTTCTCTGGAATTATTCCTAGGGATTGGACGGATTTGCAATATTTGAAGGTCATAGACTTTTCAAATAACAATCTATCTGGTGAAATCCCAAGCTCCATGTGCTCCCAACTACCATCACTCCAATGGTTGAGATTAAGCAACAACAATCTTTCTGGGAATCTTGAGTCGTCTTTGCAAACTTGCAGAAATCTCTCTGCACTTGATCTGACAGGAAACAACTTTTCCGGCACCATACCAGATTGTATTGGAGAAAACCTTCATACATTGTCTTATTTAATTCTAAAAGCCAACAAGTTCACAGGAAATATTCCTCATCAATTATGTGATCTCTCCTCTCTTCAGGTTTTAGACCTTTCCCAAAATAATATATCTGGCTCCATTCCTGCATGTCTTGGTGGTTTGAAACAAATGGCAACAGGAGATGGCTTGCGTAGCGACTGGATGATGTACTTCTCGTCGCCTGCTAATCCTATGCATATCGACTTAAATGTGAAAGGAGTAGTATATGAATATATTGATGATATCATAGAACTCATTAAAAAGTTTGACCTGTCAAGTAATAATCTATCGGGAGAAATACCAGAAGAGGTGAAAAATCTCATGGCTTTGGATAGCTTGAACTTATCTCATAACCATTTGACAGGAAAGATACCAGAGGGTATCGGAAGCTTACATAAGTTAGAAGCACTTGACCTCTCTGGTAACCATCTTTGGGGTTTAATTCCTTCAAGCATGACCTCTATGACTGCACTAAGCAAATTGAATTTGTCATTCAACAACTTCTCTGGGCCAATCCCATCAGCCAACCAATTCCTCACCTTCAATGACCCAACCTCATTTGAAGGAAACTCAGGACTTTGCGGACCTCCATTGCCAACACAATGCAGTTCAGTTAATGATCCAGCTGTGAAGGTTGACGAAGATGAAGAAGATAAGTATGGAAAATTATGGTTCTATGCAAGCACATCATTGGGGTTCATTGTAGGATTTTGGGTTGCTTTTGGAAGTTTGGTGATAAAGAGGTCATGGAGACATGCTTACTTCCAGTTTCTTGACAATATGAAAGACAAGCTTTGCTTCTGTTTTTGGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0010051 GO:0010232 GO:0010233 GO:0010305 GO:0014070 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048545 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

878

Amino Acids

96.58

Weight (kDa)

5.03

Isoelectric Point (pI)

42.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	54 - 91	1.3e-11	Leucine rich repeat N-terminal domain
LRR_14	PF23598	86 - 176	4.3e-08	Leucine-rich repeat region
LRR_8	PF13855	121 - 178	9.5e-07	Leucine rich repeat
LRR_14	PF23598	138 - 224	4.6e-14	Leucine-rich repeat region
LRR_14	PF23598	180 - 248	1.5e-10	Leucine-rich repeat region
LRR_8	PF13855	191 - 251	3.5e-09	Leucine rich repeat
LRR_14	PF23598	234 - 420	5.7e-21	Leucine-rich repeat region
LRR_8	PF13855	239 - 299	6.8e-10	Leucine rich repeat
LRR_8	PF13855	287 - 346	3.2e-07	Leucine rich repeat
LRR_8	PF13855	504 - 564	4.5e-09	Leucine rich repeat
LRR_14	PF23598	570 - 651	3.2e-06	Leucine-rich repeat region
LRR_8	PF13855	576 - 637	4e-07	Leucine rich repeat
LRR_14	PF23598	705 - 770	3.5e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0000285)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47885
fragaria_vesca	FvH4_3g09550 FvH4_4g32560
malus_domestica	MD01G1172200.v1.1
rosa_chinensis	RchiOBHm_Chr1g0353911 RchiOBHm_Chr1g0354141 RchiOBHm_Chr1g0354151 RchiOBHm_Chr1g0354161 RchiOBHm_Chr1g0354191 RchiOBHm_Chr1g0354201 RchiOBHm_Chr1g0354221 RchiOBHm_Chr1g0354271 RchiOBHm_Chr1g0354301 RchiOBHm_Chr1g0354321 RchiOBHm_Chr1g0354371 RchiOBHm_Chr1g0354401 RchiOBHm_Chr1g0354411 RchiOBHm_Chr1g0354451 RchiOBHm_Chr1g0354551 RchiOBHm_Chr1g0359231 RchiOBHm_Chr3g0470501 RchiOBHm_Chr4g0440611 RchiOBHm_Chr4g0440631 RchiOBHm_Chr4g0441421 RchiOBHm_Chr4g0441431 RchiOBHm_Chr5g0015191 RchiOBHm_Chr5g0022441 RchiOBHm_Chr7g0207081
rosa_laevigata	RLG00000009355 RLG00000009356 RLG00000023813 RLG00000024262 RLG00000028199 RLG00000028200 RLG00000028204 RLG00000028209 RLG00000028211 RLG00000028214 RLG00000028216 RLG00000028220 RLG00000028221 RLG00000028223 RLG00000028224 RLG00000028886 RLG00000029706 RLG00000032176
rosa_multiflora	Rmu_co8366321.1_g000001 Rmu_sc0001926.1_g000008 Rmu_sc0001926.1_g000009 Rmu_sc0002115.1_g000006 Rmu_sc0002115.1_g000007 Rmu_sc0002209.1_g000020 Rmu_sc0002737.1_g000005 Rmu_sc0002737.1_g000009 Rmu_sc0002737.1_g000015 Rmu_sc0002737.1_g000016 Rmu_sc0002737.1_g000018 Rmu_sc0002930.1_g000003 Rmu_sc0002930.1_g000005 Rmu_sc0003292.1_g000004 Rmu_sc0003360.1_g000004 Rmu_sc0003360.1_g000005 Rmu_sc0003381.1_g000013 Rmu_sc0004299.1_g000001 Rmu_sc0007159.1_g000001 Rmu_sc0007159.1_g000007 Rmu_sc0009777.1_g000002 Rmu_sc0010755.1_g000002 Rmu_sc0012353.1_g000001 Rmu_sc0012562.1_g000003 Rmu_sc0012562.1_g000004 Rmu_sc0012562.1_g000006 Rmu_sc0012562.1_g000013 Rmu_sc0012562.1_g000021 Rmu_sc0015525.1_g000001 Rmu_sc0015525.1_g000005 Rmu_sc0018378.1_g000001 Rmu_sc0022127.1_g000002 Rmu_sc0022144.1_g000002 Rmu_sc0035791.1_g000001
rosa_roxburghii	Rroxscaffold_1G00056680 Rroxscaffold_1G00061360 Rroxscaffold_3G00236900 Rroxscaffold_4G00300940 Rroxscaffold_4G00301040 Rroxscaffold_4G00301050 Rroxscaffold_4G00301070 Rroxscaffold_4G00301100 Rroxscaffold_4G00301110 Rroxscaffold_4G00301930 Rroxscaffold_4G00301940 Rroxscaffold_4G00301950 Rroxscaffold_7G00202690
rosa_rugosa	Rorug01G0242000 Rorug01G0242100 Rorug01G0242200 Rorug01G0242300 Rorug01G0242700 Rorug01G0242900 Rorug01G0243000 Rorug03G0109600 Rorug03G0109700 Rorug04G0327000 Rorug04G0333500 Rorug04G0333600 Rorug05G0024600 RorugPtG0003000
rosa_samantha	Rh1AG253200 Rh1AG253400 Rh1BG225200 Rh1CG177100 Rh1CG234500 Rh1CG237000 Rh1DG252000 Rh1DG252400 Rh1DG252900 Rh3CG085900 Rh4BG399300 Rh4DG391900
rosa_wichuraiana	Rw1G015760 Rw1G022030 Rw1G022100 Rw1G022120 Rw1G022230 Rw5G010290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	1422, 1769
AciI	CCGC	1 cut(s)	2403
AclWI	GGATC	2 cut(s)	200, 2435
AcoI	YGGCCR	2 cut(s)	1436, 1495
AcuI	CTGAAG	3 cut(s)	1244, 1304, 1865
AfaI	GTAC	4 cut(s)	328, 878, 1019, 1991
AfiI	CCNNNNNNNGG	1 cut(s)	2254
AjnI	CCWGG	5 cut(s)	585, 596, 657, 729, 801
AloI	GAACNNNNNNTCC	6 cut(s)	449, 481, 521, 553, 593, 625
AluBI	AGCT	9 cut(s)	23, 298, 952, 1458, 1635, 2157, 2211, 2447, 2614
AluI	AGCT	9 cut(s)	23, 298, 952, 1458, 1635, 2157, 2211, 2447, 2614
Alw21I	GWGCWC	1 cut(s)	1646
Alw26I	GTCTC	3 cut(s)	359, 1258, 2566
AlwI	GGATC	2 cut(s)	200, 2435
AlwNI	CAGNNNCTG	5 cut(s)	586, 658, 730, 802, 874
AoxI	GGCC	8 cut(s)	141, 174, 397, 870, 1436, 1481, 1495, 2330
ApeKI	GCWGC	3 cut(s)	20, 23, 246
Asp700I	GAANNNNTTC	9 cut(s)	496, 568, 640, 712, 784, 856, 928, 1541, 1797
AspA2I	CCTAGG	1 cut(s)	1559
AspLEI	GCGC	1 cut(s)	220
AsuHPI	GGTGA	5 cut(s)	1302, 1634, 2143, 2350, 2566
AsuII	TTCGAA	4 cut(s)	644, 716, 788, 860
AvrII	CCTAGG	1 cut(s)	1559
BalI	TGGCCA	2 cut(s)	1438, 1497
BanI	GGYRCC	2 cut(s)	1422, 1769
BarI	GAAGNNNNNNTAC	2 cut(s)	1410, 1442
BauI	CACGAG	1 cut(s)	1499
BbsI	GAAGAC	1 cut(s)	191
Bbv12I	GWGCWC	1 cut(s)	1646
BbvI	GCAGC	3 cut(s)	10, 32, 233
BccI	CCATC	4 cut(s)	1663, 1958, 2256, 2347
BciT130I	CCWGG	5 cut(s)	587, 598, 659, 731, 803
BciVI	GTATCC	3 cut(s)	304, 1084, 1198
BcoDI	GTCTC	3 cut(s)	359, 1258, 2566
BfaI	CTAG	4 cut(s)	453, 525, 1080, 1560
BfuI	GTATCC	3 cut(s)	304, 1084, 1198
BglI	GCCNNNNNGGC	1 cut(s)	149
BisI	GCNGC	3 cut(s)	21, 24, 247
BlnI	CCTAGG	1 cut(s)	1559
BlsI	GCNGC	3 cut(s)	22, 25, 248
BmcAI	AGTACT	1 cut(s)	1019
Bme1390I	CCNGG	5 cut(s)	587, 598, 659, 731, 803
BmiI	GGNNCC	3 cut(s)	1424, 1771, 1918
BmrFI	CCNGG	5 cut(s)	587, 598, 659, 731, 803
BmsI	GCATC	2 cut(s)	1002, 1124
BpiI	GAAGAC	1 cut(s)	191
BplI	GAGNNNNNCTC	4 cut(s)	1321, 1353, 1366, 1398
Bpu14I	TTCGAA	4 cut(s)	644, 716, 788, 860
BpuEI	CTTGAG	2 cut(s)	1516, 1724
Bsa29I	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BsaBI	GATNNNNATC	1 cut(s)	1157
BsaI	GGTCTC	1 cut(s)	359
BsaJI	CCNNGG	5 cut(s)	585, 657, 729, 801, 1559
BsaWI	WCCGGW	6 cut(s)	467, 539, 611, 683, 755, 899
BsaXI	ACNNNNNCTCC	2 cut(s)	1644, 1674
Bsc4I	CCNNNNNNNGG	1 cut(s)	2254
Bse1I	ACTGG	5 cut(s)	257, 1154, 1345, 1985, 2587
Bse3DI	GCAATG	1 cut(s)	2411
Bse8I	GATNNNNATC	1 cut(s)	1157
BseBI	CCWGG	5 cut(s)	587, 598, 659, 731, 803
BseCI	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BseDI	CCNNGG	5 cut(s)	585, 657, 729, 801, 1559
BseGI	GGATG	2 cut(s)	1115, 1989
BseJI	GATNNNNATC	1 cut(s)	1157
BseLI	CCNNNNNNNGG	1 cut(s)	2254
BseMI	GCAATG	1 cut(s)	2411
BseMII	CTCAG	1 cut(s)	2406
BseNI	ACTGG	5 cut(s)	257, 1154, 1345, 1985, 2587
BseRI	GAGGAG	2 cut(s)	1371, 1864
BseXI	GCAGC	3 cut(s)	10, 32, 233
BsgI	GTGCAG	2 cut(s)	1722, 2274
Bsh1285I	CGRYCG	7 cut(s)	417, 489, 561, 633, 705, 777, 849
BshFI	GGCC	8 cut(s)	143, 176, 399, 872, 1438, 1483, 1497, 2332
BshNI	GGYRCC	2 cut(s)	1422, 1769
BshVI	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BsiEI	CGRYCG	7 cut(s)	417, 489, 561, 633, 705, 777, 849
BsiHKAI	GWGCWC	1 cut(s)	1646
BsiSI	CCGG	7 cut(s)	468, 540, 612, 684, 756, 900, 1767
BslI	CCNNNNNNNGG	1 cut(s)	2254
BsmAI	GTCTC	3 cut(s)	359, 1258, 2566
BsnI	GGCC	8 cut(s)	143, 176, 399, 872, 1438, 1483, 1497, 2332
Bso31I	GGTCTC	1 cut(s)	359
Bsp119I	TTCGAA	4 cut(s)	644, 716, 788, 860
Bsp1286I	GDGCHC	1 cut(s)	1646
BspACI	CCGC	1 cut(s)	2403
BspANI	GGCC	8 cut(s)	143, 176, 399, 872, 1438, 1483, 1497, 2332
BspCNI	CTCAG	1 cut(s)	2405
BspDI	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BspHI	TCATGA	1 cut(s)	1144
BspLI	GGNNCC	3 cut(s)	1424, 1771, 1918
BspPI	GGATC	2 cut(s)	200, 2435
BspT104I	TTCGAA	4 cut(s)	644, 716, 788, 860
BspT107I	GGYRCC	2 cut(s)	1422, 1769
BspTNI	GGTCTC	1 cut(s)	359
BsrDI	GCAATG	1 cut(s)	2411
BsrI	ACTGG	5 cut(s)	257, 1154, 1345, 1985, 2587
BssECI	CCNNGG	5 cut(s)	585, 657, 729, 801, 1559
BssSI	CACGAG	1 cut(s)	1499
BssT1I	CCWWGG	1 cut(s)	1559
Bst2BI	CACGAG	1 cut(s)	1499
Bst2UI	CCWGG	5 cut(s)	587, 598, 659, 731, 803
Bst4CI	ACNGT	3 cut(s)	127, 1034, 1412
Bst6I	CTCTTC	4 cut(s)	159, 1389, 1884, 2121
BstAPI	GCANNNNNTGC	2 cut(s)	243, 267
BstBI	TTCGAA	4 cut(s)	644, 716, 788, 860
BstC8I	GCNNGC	8 cut(s)	7, 154, 216, 870, 954, 1970, 2004, 2503
BstDEI	CTNAG	4 cut(s)	1004, 1454, 2294, 2392
BstEII	GGTNACC	1 cut(s)	2243
BstF5I	GGATG	2 cut(s)	1115, 1989
BstHHI	GCGC	1 cut(s)	220
BstMAI	GTCTC	3 cut(s)	359, 1258, 2566
BstMCI	CGRYCG	7 cut(s)	417, 489, 561, 633, 705, 777, 849
BstMWI	GCNNNNNNNGC	5 cut(s)	149, 243, 267, 1641, 1974
BstNI	CCWGG	5 cut(s)	587, 598, 659, 731, 803
BstNSI	RCATGY	2 cut(s)	1932, 2579
BstPI	GGTNACC	1 cut(s)	2243
BstSCI	CCNGG	5 cut(s)	585, 596, 657, 729, 801
BstV1I	GCAGC	3 cut(s)	10, 32, 233
BstV2I	GAAGAC	1 cut(s)	191
BstX2I	RGATCY	1 cut(s)	205
BstXI	CCANNNNNNTGG	1 cut(s)	1126
BstYI	RGATCY	1 cut(s)	205
Bsu15I	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BsuI	GTATCC	3 cut(s)	304, 1084, 1198
BsuRI	GGCC	8 cut(s)	143, 176, 399, 872, 1438, 1483, 1497, 2332
BsuTUI	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
BtsCI	GGATG	2 cut(s)	1115, 1989
Cac8I	GCNNGC	8 cut(s)	7, 154, 216, 870, 954, 1970, 2004, 2503
CaiI	CAGNNNCTG	5 cut(s)	586, 658, 730, 802, 874
CciI	TCATGA	1 cut(s)	1144
CfoI	GCGC	1 cut(s)	220
ClaI	ATCGAT	7 cut(s)	413, 485, 557, 629, 701, 773, 845
Csp6I	GTAC	4 cut(s)	327, 877, 1018, 1990
CviQI	GTAC	4 cut(s)	327, 877, 1018, 1990
DdeI	CTNAG	4 cut(s)	1004, 1454, 2294, 2392
EaeI	YGGCCR	2 cut(s)	1436, 1495
Eam1104I	CTCTTC	4 cut(s)	159, 1389, 1884, 2121
EarI	CTCTTC	4 cut(s)	159, 1389, 1884, 2121
Eco130I	CCWWGG	1 cut(s)	1559
Eco31I	GGTCTC	1 cut(s)	359
Eco32I	GATATC	1 cut(s)	2065
Eco57I	CTGAAG	3 cut(s)	1244, 1304, 1865
Eco91I	GGTNACC	1 cut(s)	2243
EcoO109I	RGGNCCY	3 cut(s)	175, 871, 1481
EcoO65I	GGTNACC	1 cut(s)	2243
EcoRI	GAATTC	1 cut(s)	185
EcoRII	CCWGG	5 cut(s)	585, 596, 657, 729, 801
EcoRV	GATATC	1 cut(s)	2065
EcoT14I	CCWWGG	1 cut(s)	1559
EcoT22I	ATGCAT	1 cut(s)	2019
ErhI	CCWWGG	1 cut(s)	1559
FalI	AAGNNNNNCTT	4 cut(s)	2598, 2630, 2603, 2635
Fnu4HI	GCNGC	3 cut(s)	21, 24, 247
FokI	GGATG	2 cut(s)	1102, 1996
Fsp4HI	GCNGC	3 cut(s)	21, 24, 247
FspBI	CTAG	4 cut(s)	453, 525, 1080, 1560
GlaI	GCGC	1 cut(s)	219
GluI	GCNGC	3 cut(s)	21, 24, 247
HaeIII	GGCC	8 cut(s)	143, 176, 399, 872, 1438, 1483, 1497, 2332
HapII	CCGG	7 cut(s)	468, 540, 612, 684, 756, 900, 1767
HhaI	GCGC	1 cut(s)	220
Hin6I	GCGC	1 cut(s)	218
HinP1I	GCGC	1 cut(s)	218
HincII	GTYRAC	1 cut(s)	2458
HindII	GTYRAC	1 cut(s)	2458
HindIII	AAGCTT	3 cut(s)	1456, 2209, 2612
HinfI	GANTC	6 cut(s)	373, 1153, 1174, 1266, 1699, 1706
HpaII	CCGG	7 cut(s)	468, 540, 612, 684, 756, 900, 1767
HphI	GGTGA	5 cut(s)	1302, 1634, 2143, 2350, 2566
Hpy99I	CGWCG	1 cut(s)	2002
HpyCH4III	ACNGT	3 cut(s)	127, 1034, 1412
HpyCH4IV	ACGT	3 cut(s)	1094, 1137, 1392
HpyF10VI	GCNNNNNNNGC	5 cut(s)	149, 243, 267, 1641, 1974
HpyF3I	CTNAG	4 cut(s)	1004, 1454, 2294, 2392
HpySE526I	ACGT	3 cut(s)	1094, 1137, 1392
HspAI	GCGC	1 cut(s)	218
LmnI	GCTCC	5 cut(s)	31, 949, 1640, 1649, 1922
Lsp1109I	GCAGC	3 cut(s)	10, 32, 233
LweI	GCATC	2 cut(s)	1002, 1124
MaeI	CTAG	4 cut(s)	453, 525, 1080, 1560
MaeII	ACGT	3 cut(s)	1094, 1137, 1392
MaeIII	GTNAC	3 cut(s)	284, 1444, 2243
MflI	RGATCY	1 cut(s)	205
MhlI	GDGCHC	1 cut(s)	1646
MlsI	TGGCCA	2 cut(s)	1438, 1497
MluNI	TGGCCA	2 cut(s)	1438, 1497
MlyI	GAGTC	2 cut(s)	1260, 1715
MmeI	TCCRAC	9 cut(s)	431, 503, 575, 647, 719, 791, 863, 1143, 1494
Mox20I	TGGCCA	2 cut(s)	1438, 1497
Mph1103I	ATGCAT	1 cut(s)	2019
MroXI	GAANNNNTTC	9 cut(s)	496, 568, 640, 712, 784, 856, 928, 1541, 1797
MscI	TGGCCA	2 cut(s)	1438, 1497
MseI	TTAA	8 cut(s)	68, 1253, 1676, 1817, 2027, 2079, 2261, 2436
MslI	CAYNNNNRTG	1 cut(s)	1663
Msp20I	TGGCCA	2 cut(s)	1438, 1497
MspA1I	CMGCKG	2 cut(s)	23, 2447
MspI	CCGG	7 cut(s)	468, 540, 612, 684, 756, 900, 1767
MspR9I	CCNGG	5 cut(s)	587, 598, 659, 731, 803
MvaI	CCWGG	5 cut(s)	587, 598, 659, 731, 803
MwoI	GCNNNNNNNGC	5 cut(s)	149, 243, 267, 1641, 1974
NlaIV	GGNNCC	3 cut(s)	1424, 1771, 1918
NsiI	ATGCAT	1 cut(s)	2019
NspI	RCATGY	2 cut(s)	1932, 2579
NspV	TTCGAA	4 cut(s)	644, 716, 788, 860
PagI	TCATGA	1 cut(s)	1144
PdmI	GAANNNNTTC	9 cut(s)	496, 568, 640, 712, 784, 856, 928, 1541, 1797
PfeI	GAWTC	4 cut(s)	373, 1153, 1174, 1699
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	3 cut(s)	22, 25, 248
Ple19I	CGATCG	7 cut(s)	417, 489, 561, 633, 705, 777, 849
PleI	GAGTC	2 cut(s)	1260, 1714
PpsI	GAGTC	2 cut(s)	1260, 1714
Psp6I	CCWGG	5 cut(s)	585, 596, 657, 729, 801
PspEI	GGTNACC	1 cut(s)	2243
PspGI	CCWGG	5 cut(s)	585, 596, 657, 729, 801
PspN4I	GGNNCC	3 cut(s)	1424, 1771, 1918
PstNI	CAGNNNCTG	5 cut(s)	586, 658, 730, 802, 874
PsuI	RGATCY	1 cut(s)	205
PvuI	CGATCG	7 cut(s)	417, 489, 561, 633, 705, 777, 849
PvuII	CAGCTG	2 cut(s)	23, 2447
RsaI	GTAC	4 cut(s)	328, 878, 1019, 1991
RsaNI	GTAC	4 cut(s)	327, 877, 1018, 1990
RseI	CAYNNNNRTG	1 cut(s)	1663
SaqAI	TTAA	8 cut(s)	68, 1253, 1676, 1817, 2027, 2079, 2261, 2436
SatI	GCNGC	3 cut(s)	21, 24, 247
ScaI	AGTACT	1 cut(s)	1019
SchI	GAGTC	2 cut(s)	1260, 1715
ScrFI	CCNGG	5 cut(s)	587, 598, 659, 731, 803
SduI	GDGCHC	1 cut(s)	1646
SfaNI	GCATC	2 cut(s)	1002, 1124
SfuI	TTCGAA	4 cut(s)	644, 716, 788, 860
SmiMI	CAYNNNNRTG	1 cut(s)	1663
SmlI	CTYRAG	2 cut(s)	1531, 1703
SmoI	CTYRAG	2 cut(s)	1531, 1703
SsiI	CCGC	1 cut(s)	2403
SspI	AATATT	3 cut(s)	108, 1583, 1849
SspMI	CTAG	4 cut(s)	453, 525, 1080, 1560
StyD4I	CCNGG	5 cut(s)	585, 596, 657, 729, 801
StyI	CCWWGG	1 cut(s)	1559
TaaI	ACNGT	3 cut(s)	127, 1034, 1412
TaiI	ACGT	3 cut(s)	1097, 1140, 1395
TatI	WGTACW	2 cut(s)	1017, 1989
TfiI	GAWTC	4 cut(s)	373, 1153, 1174, 1699
Tru1I	TTAA	8 cut(s)	68, 1253, 1676, 1817, 2027, 2079, 2261, 2436
Tru9I	TTAA	8 cut(s)	68, 1253, 1676, 1817, 2027, 2079, 2261, 2436
TseI	GCWGC	3 cut(s)	20, 23, 246
TspDTI	ATGAA	9 cut(s)	212, 458, 986, 1029, 1790, 2064, 2481, 2509, 2618
TspGWI	ACGGA	2 cut(s)	1202, 1586
XceI	RCATGY	2 cut(s)	1932, 2579
XcmI	CCANNNNNNNNNTGG	2 cut(s)	912, 1662
XmaJI	CCTAGG	1 cut(s)	1559
XmnI	GAANNNNTTC	9 cut(s)	496, 568, 640, 712, 784, 856, 928, 1541, 1797
XspI	CTAG	4 cut(s)	453, 525, 1080, 1560
ZrmI	AGTACT	1 cut(s)	1019
Zsp2I	ATGCAT	1 cut(s)	2019

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.