FvH4_1g14881

salicylic acid-binding protein 2-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
8331609 .. 8332661
1053 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g14881.t2

Sequence Viewer

Length: 276 bp
ATGGTCCAATTGGATTTAACACTAGCATTGACATTAGTAAGATGGGCGCCAATATTTCATGAAGAACTAGTATTGACTATGGAGAAATACGGATCGGTTCCTAAAGTGTTCATCATGACCGAGCAAGACCCTTCAATGGATCTGCAATTGTTGATGATCACCAAAAATCCACCAGATGAAGTCAAGGTGATTAAAGGTTCTGATCATATGGTCATGTTCTCTAGACCACTGGAGTTGTTCTCCAGCCTCCTTCAGATTGCTCAAATACATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

92

Amino Acids

10.43

Weight (kDa)

5.15

Isoelectric Point (pI)

41.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 46
AclWI GGATC 2 cut(s) 100, 147
AcuI CTGAAG 1 cut(s) 236
AcyI GRCGYC 1 cut(s) 47
AfiI CCNNNNNNNGG 1 cut(s) 136
AgsI TTSAA 1 cut(s) 135
AhlI ACTAGT 1 cut(s) 67
AlwI GGATC 2 cut(s) 100, 147
AspLEI GCGC 1 cut(s) 49
AspS9I GGNCC 1 cut(s) 4
AsuHPI GGTGA 2 cut(s) 151, 199
AvaII GGWCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 46
BccI CCATC 1 cut(s) 36
BclI TGATCA 2 cut(s) 156, 202
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 3 cut(s) 23, 68, 222
BfoI RGCGCY 1 cut(s) 50
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 48, 99
BplI GAGNNNNNCTC 2 cut(s) 224, 256
BpmI CTGGAG 2 cut(s) 226, 251
BsaHI GRCGYC 1 cut(s) 47
Bsc4I CCNNNNNNNGG 1 cut(s) 136
Bse1I ACTGG 1 cut(s) 234
BseLI CCNNNNNNNGG 1 cut(s) 136
BseNI ACTGG 1 cut(s) 234
BshNI GGYRCC 1 cut(s) 46
BslI CCNNNNNNNGG 1 cut(s) 136
Bsp143I GATC 4 cut(s) 92, 139, 156, 202
BspHI TCATGA 2 cut(s) 58, 114
BspLI GGNNCC 2 cut(s) 48, 99
BspPI GGATC 2 cut(s) 100, 147
BspT107I GGYRCC 1 cut(s) 46
BsrI ACTGG 1 cut(s) 234
BssMI GATC 4 cut(s) 92, 139, 156, 202
BssNI GRCGYC 1 cut(s) 47
BstACI GRCGYC 1 cut(s) 47
BstH2I RGCGCY 1 cut(s) 50
BstHHI GCGC 1 cut(s) 49
BstKTI GATC 4 cut(s) 95, 142, 159, 205
BstMBI GATC 4 cut(s) 92, 139, 156, 202
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BtsIMutI CAGTG 1 cut(s) 227
CciI TCATGA 2 cut(s) 58, 114
CfoI GCGC 1 cut(s) 49
Cfr13I GGNCC 1 cut(s) 4
CspCI CAANNNNNGTGG 2 cut(s) 216, 251
CviAII CATG 3 cut(s) 59, 115, 214
CviJI RGCY 1 cut(s) 246
CviKI_1 RGCY 1 cut(s) 246
DinI GGCGCC 1 cut(s) 48
DpnI GATC 4 cut(s) 94, 141, 158, 204
DpnII GATC 4 cut(s) 92, 139, 156, 202
Eco47I GGWCC 1 cut(s) 4
Eco57I CTGAAG 1 cut(s) 236
EgeI GGCGCC 1 cut(s) 48
EheI GGCGCC 1 cut(s) 48
FaeI CATG 3 cut(s) 62, 118, 217
FaiI YATR 6 cut(s) 60, 80, 116, 207, 209, 215
FatI CATG 3 cut(s) 58, 114, 213
FauNDI CATATG 1 cut(s) 207
FbaI TGATCA 2 cut(s) 156, 202
FspBI CTAG 3 cut(s) 23, 68, 222
GlaI GCGC 1 cut(s) 48
GsuI CTGGAG 2 cut(s) 226, 251
HaeII RGCGCY 1 cut(s) 50
HhaI GCGC 1 cut(s) 49
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 3 cut(s) 62, 118, 217
Hin6I GCGC 1 cut(s) 47
HinP1I GCGC 1 cut(s) 47
HphI GGTGA 2 cut(s) 151, 199
Hpy188I TCNGA 2 cut(s) 202, 255
Hpy188III TCNNGA 3 cut(s) 59, 115, 222
HpyAV CCTTC 2 cut(s) 141, 260
HpyCH4V TGCA 1 cut(s) 145
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 3 cut(s) 62, 118, 217
HspAI GCGC 1 cut(s) 47
KasI GGCGCC 1 cut(s) 46
Ksp22I TGATCA 2 cut(s) 156, 202
Kzo9I GATC 4 cut(s) 92, 139, 156, 202
LpnPI CCDG 3 cut(s) 186, 215, 256
MaeI CTAG 3 cut(s) 23, 68, 222
MalI GATC 4 cut(s) 94, 141, 158, 204
MboI GATC 4 cut(s) 92, 139, 156, 202
MboII GAAGA 1 cut(s) 74
MfeI CAATTG 2 cut(s) 8, 146
MflI RGATCY 1 cut(s) 139
MluCI AATT 2 cut(s) 8, 146
Mly113I GGCGCC 1 cut(s) 47
MnlI CCTC 1 cut(s) 257
MseI TTAA 3 cut(s) 17, 192, 274
MunI CAATTG 2 cut(s) 8, 146
NarI GGCGCC 1 cut(s) 47
NdeI CATATG 1 cut(s) 207
NdeII GATC 4 cut(s) 92, 139, 156, 202
NlaIII CATG 3 cut(s) 62, 118, 217
NlaIV GGNNCC 2 cut(s) 48, 99
PagI TCATGA 2 cut(s) 58, 114
PluTI GGCGCC 1 cut(s) 50
PspN4I GGNNCC 2 cut(s) 48, 99
PspPI GGNCC 1 cut(s) 4
PsuI RGATCY 1 cut(s) 139
SaqAI TTAA 3 cut(s) 17, 192, 274
Sau3AI GATC 4 cut(s) 92, 139, 156, 202
Sau96I GGNCC 1 cut(s) 4
SetI ASST 2 cut(s) 189, 199
SfoI GGCGCC 1 cut(s) 48
SinI GGWCC 1 cut(s) 4
SpeI ACTAGT 1 cut(s) 67
Sse9I AATT 2 cut(s) 8, 146
SspDI GGCGCC 1 cut(s) 46
SspI AATATT 1 cut(s) 54
SspMI CTAG 3 cut(s) 23, 68, 222
TaqII GACCGA 1 cut(s) 134
TasI AATT 2 cut(s) 8, 146
Tru1I TTAA 3 cut(s) 17, 192, 274
Tru9I TTAA 3 cut(s) 17, 192, 274
TscAI CASTG 1 cut(s) 234
TspDTI ATGAA 4 cut(s) 47, 75, 100, 192
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 1 cut(s) 234
VpaK11BI GGWCC 1 cut(s) 4
XbaI TCTAGA 1 cut(s) 221
XspI CTAG 3 cut(s) 23, 68, 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.