Prupe.7G141400_v2.0.a1

salicylic acid-binding protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000171
Physical Location & Seq
Reverse (-)
15679185 .. 15681388
2204 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G141400.1

Sequence Viewer

Length: 840 bp
ATGGAGAATATGAGAGTGAAGCATTTGGTGTCTTTCCTTTTATTTCTTTGCTTGACCAGAATCTGCACCCCATCTCCAAACACAGATGCAAACCAGAAGCATTTTGTGCTGGTTCATGGAGCTGGTCATGGGGCATGGTGCTGGTACAAGGTCTCAACTCTACTCAGCTCAATTGGTCATAATGTTACAGCGCTAGACCTAGCAGCATCTGGGGTCAACCCAAAGCAAGTTCAACAACTTCATTCTCTCTCGGATTACGTTGAGCCATTGATGAGATTCATGAAGTCTCTCCCGACAAAGGAGAGGGTCATCCTTGTGGGCCACAGCATGGGTGGGGCAGCCATATCCATTGCCATGGAGAAATTCCCTGAGAAGATTTATACTGCAGTATTTGCCACCGCTGTAATGCCTGGTCCTGCTCTCGACTACTTAAATCTGTCATCTCAGATTTTGAACAGTCTGGATTTGATGGACACTCAATTTAGATATGATCGGGGACCCAACAATCCTCCTACCGCCGCACTTCTTGGGCCAAAGTTATTGTCGTCGTCAATGTACCAACTCTCACCACCAGAGGATTTAACCCTAGCATTGTCCTTGGTAAGATTCACTCCTCTCTTTAGTGATGATATAAAACTCACTAATGAGAAATATGGATCGGTTCGTAGAGTATTCATCGGGTGCGACCAAGACCATATAATAACTGAGAAATCGCGAATGTTGATGATCAATAAGAATCCGCCGAATGAAGTCAAATTGATCAATGGTTCTGATCACATGGTGATGTTCTCTAGACCGCTTGAGCTGTTCTCCTACCTCAAGGAGGTTGCTGAGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

280

Amino Acids

31.1

Weight (kDa)

7.73

Isoelectric Point (pI)

33.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 328
AccII CGCG 1 cut(s) 715
AciI CCGC 5 cut(s) 399, 516, 519, 740, 797
AclWI GGATC 1 cut(s) 664
AcsI RAATTY 1 cut(s) 362
AdeI CACNNNGTG 1 cut(s) 781
AfaI GTAC 2 cut(s) 146, 557
AfeI AGCGCT 1 cut(s) 192
AfiI CCNNNNNNNGG 3 cut(s) 298, 328, 823
AgsI TTSAA 2 cut(s) 233, 454
AjnI CCWGG 1 cut(s) 409
AluBI AGCT 3 cut(s) 122, 168, 805
AluI AGCT 3 cut(s) 122, 168, 805
Alw26I GTCTC 2 cut(s) 157, 291
AlwI GGATC 1 cut(s) 664
AlwNI CAGNNNCTG 2 cut(s) 63, 209
Aor51HI AGCGCT 1 cut(s) 192
AoxI GGCC 2 cut(s) 319, 530
ApeKI GCWGC 2 cut(s) 203, 338
ApoI RAATTY 1 cut(s) 362
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
AspLEI GCGC 1 cut(s) 193
AspS9I GGNCC 4 cut(s) 319, 413, 497, 530
AsuHPI GGTGA 2 cut(s) 558, 793
AvaII GGWCC 2 cut(s) 413, 497
BbvI GCAGC 2 cut(s) 215, 350
BccI CCATC 2 cut(s) 79, 463
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 3 cut(s) 726, 759, 772
BcoDI GTCTC 2 cut(s) 157, 291
BfaI CTAG 4 cut(s) 194, 200, 587, 792
BfmI CTRYAG 1 cut(s) 384
BfoI RGCGCY 1 cut(s) 194
BisI GCNGC 3 cut(s) 204, 339, 519
BlsI GCNGC 3 cut(s) 205, 340, 520
Bme1390I CCNGG 1 cut(s) 411
Bme18I GGWCC 2 cut(s) 413, 497
BmgT120I GGNCC 4 cut(s) 319, 413, 497, 530
BmiI GGNNCC 2 cut(s) 498, 499
BmrFI CCNGG 1 cut(s) 411
BmsI GCATC 2 cut(s) 76, 215
BplI GAGNNNNNCTC 2 cut(s) 794, 826
BpuEI CTTGAG 2 cut(s) 803, 821
BsaI GGTCTC 1 cut(s) 157
BsaJI CCNNGG 2 cut(s) 354, 597
BsaXI ACNNNNNCTCC 2 cut(s) 58, 88
Bsc4I CCNNNNNNNGG 3 cut(s) 298, 328, 823
Bse3DI GCAATG 1 cut(s) 348
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 2 cut(s) 354, 597
BseGI GGATG 1 cut(s) 309
BseLI CCNNNNNNNGG 3 cut(s) 298, 328, 823
BseMI GCAATG 1 cut(s) 348
BseMII CTCAG 5 cut(s) 178, 360, 458, 696, 822
BseRI GAGGAG 1 cut(s) 603
BseXI GCAGC 2 cut(s) 215, 350
BsgI GTGCAG 1 cut(s) 49
Bsh1236I CGCG 1 cut(s) 715
BshFI GGCC 2 cut(s) 321, 532
BslFI GGGAC 1 cut(s) 510
BslI CCNNNNNNNGG 3 cut(s) 298, 328, 823
BsmAI GTCTC 2 cut(s) 157, 291
BsmFI GGGAC 1 cut(s) 510
BsnI GGCC 2 cut(s) 321, 532
Bso31I GGTCTC 1 cut(s) 157
Bsp143I GATC 5 cut(s) 490, 656, 726, 759, 772
Bsp19I CCATGG 1 cut(s) 354
Bsp68I TCGCGA 1 cut(s) 715
BspACI CCGC 5 cut(s) 399, 516, 519, 740, 797
BspANI GGCC 2 cut(s) 321, 532
BspCNI CTCAG 5 cut(s) 177, 361, 457, 697, 823
BspFNI CGCG 1 cut(s) 715
BspHI TCATGA 1 cut(s) 279
BspLI GGNNCC 2 cut(s) 498, 499
BspMAI CTGCAG 1 cut(s) 388
BspPI GGATC 1 cut(s) 664
BspTNI GGTCTC 1 cut(s) 157
BsrDI GCAATG 1 cut(s) 348
BssECI CCNNGG 2 cut(s) 354, 597
BssMI GATC 5 cut(s) 490, 656, 726, 759, 772
BssT1I CCWWGG 2 cut(s) 354, 597
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 1 cut(s) 458
BstAPI GCANNNNNTGC 2 cut(s) 106, 392
BstDEI CTNAG 5 cut(s) 164, 369, 444, 705, 831
BstDSI CCRYGG 1 cut(s) 354
BstENI CCTNNNNNAGG 1 cut(s) 821
BstF5I GGATG 1 cut(s) 309
BstFNI CGCG 1 cut(s) 715
BstH2I RGCGCY 1 cut(s) 194
BstHHI GCGC 1 cut(s) 193
BstKTI GATC 5 cut(s) 493, 659, 729, 762, 775
BstMAI GTCTC 2 cut(s) 157, 291
BstMBI GATC 5 cut(s) 490, 656, 726, 759, 772
BstMWI GCNNNNNNNGC 2 cut(s) 106, 392
BstNI CCWGG 1 cut(s) 411
BstSCI CCNGG 1 cut(s) 409
BstSFI CTRYAG 1 cut(s) 384
BstUI CGCG 1 cut(s) 715
BstV1I GCAGC 2 cut(s) 215, 350
BstXI CCANNNNNNTGG 1 cut(s) 355
BsuRI GGCC 2 cut(s) 321, 532
BtgI CCRYGG 1 cut(s) 354
BtsCI GGATG 1 cut(s) 309
BtuMI TCGCGA 1 cut(s) 715
CaiI CAGNNNCTG 2 cut(s) 63, 209
CciI TCATGA 1 cut(s) 279
CfoI GCGC 1 cut(s) 193
Cfr13I GGNCC 4 cut(s) 319, 413, 497, 530
Csp6I GTAC 2 cut(s) 145, 556
CviAII CATG 7 cut(s) 116, 128, 135, 280, 328, 355, 778
CviJI RGCY 7 cut(s) 122, 168, 265, 321, 341, 532, 805
CviKI_1 RGCY 7 cut(s) 122, 168, 265, 321, 341, 532, 805
CviQI GTAC 2 cut(s) 145, 556
DdeI CTNAG 5 cut(s) 164, 369, 444, 705, 831
DpnI GATC 5 cut(s) 492, 658, 728, 761, 774
DpnII GATC 5 cut(s) 490, 656, 726, 759, 772
DraIII CACNNNGTG 1 cut(s) 781
EciI GGCGGA 1 cut(s) 729
Eco130I CCWWGG 2 cut(s) 354, 597
Eco31I GGTCTC 1 cut(s) 157
Eco47I GGWCC 2 cut(s) 413, 497
Eco47III AGCGCT 1 cut(s) 192
EcoNI CCTNNNNNAGG 1 cut(s) 821
EcoO109I RGGNCCY 1 cut(s) 497
EcoRII CCWGG 1 cut(s) 409
EcoT14I CCWWGG 2 cut(s) 354, 597
ErhI CCWWGG 2 cut(s) 354, 597
FaeI CATG 7 cut(s) 119, 131, 138, 283, 331, 358, 781
FaqI GGGAC 1 cut(s) 510
FatI CATG 7 cut(s) 115, 127, 134, 279, 327, 354, 777
FbaI TGATCA 3 cut(s) 726, 759, 772
Fnu4HI GCNGC 3 cut(s) 204, 339, 519
FokI GGATG 1 cut(s) 296
Fsp4HI GCNGC 3 cut(s) 204, 339, 519
FspBI CTAG 4 cut(s) 194, 200, 587, 792
GlaI GCGC 1 cut(s) 192
GluI GCNGC 3 cut(s) 204, 339, 519
HaeII RGCGCY 1 cut(s) 194
HaeIII GGCC 2 cut(s) 321, 532
HhaI GCGC 1 cut(s) 193
Hin1II CATG 7 cut(s) 119, 131, 138, 283, 331, 358, 781
Hin6I GCGC 1 cut(s) 191
HinP1I GCGC 1 cut(s) 191
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HinfI GANTC 4 cut(s) 60, 276, 606, 736
HphI GGTGA 2 cut(s) 558, 793
Hpy166II GTNNAC 1 cut(s) 217
Hpy188I TCNGA 3 cut(s) 253, 447, 772
Hpy188III TCNNGA 6 cut(s) 280, 292, 422, 461, 714, 792
Hpy8I GTNNAC 1 cut(s) 217
Hpy99I CGWCG 1 cut(s) 550
HpyCH4III ACNGT 1 cut(s) 458
HpyCH4IV ACGT 1 cut(s) 258
HpyCH4V TGCA 3 cut(s) 66, 89, 386
HpyF10VI GCNNNNNNNGC 2 cut(s) 106, 392
HpyF3I CTNAG 5 cut(s) 164, 369, 444, 705, 831
HpySE526I ACGT 1 cut(s) 258
Hsp92II CATG 7 cut(s) 119, 131, 138, 283, 331, 358, 781
HspAI GCGC 1 cut(s) 191
KflI GGGWCCC 1 cut(s) 497
Ksp22I TGATCA 3 cut(s) 726, 759, 772
Kzo9I GATC 5 cut(s) 490, 656, 726, 759, 772
LmnI GCTCC 1 cut(s) 119
Lsp1109I GCAGC 2 cut(s) 215, 350
LweI GCATC 2 cut(s) 76, 215
MaeI CTAG 4 cut(s) 194, 200, 587, 792
MaeII ACGT 1 cut(s) 258
MaeIII GTNAC 1 cut(s) 184
MalI GATC 5 cut(s) 492, 658, 728, 761, 774
MboI GATC 5 cut(s) 490, 656, 726, 759, 772
MboII GAAGA 1 cut(s) 385
MfeI CAATTG 1 cut(s) 171
MluCI AATT 4 cut(s) 171, 362, 479, 755
MnlI CCTC 6 cut(s) 297, 519, 568, 624, 817, 827
MseI TTAA 2 cut(s) 431, 581
MslI CAYNNNNRTG 3 cut(s) 314, 353, 782
MspA1I CMGCKG 1 cut(s) 401
MspR9I CCNGG 1 cut(s) 411
MunI CAATTG 1 cut(s) 171
MvaI CCWGG 1 cut(s) 411
MvnI CGCG 1 cut(s) 715
MwoI GCNNNNNNNGC 2 cut(s) 106, 392
NcoI CCATGG 1 cut(s) 354
NdeII GATC 5 cut(s) 490, 656, 726, 759, 772
NlaIII CATG 7 cut(s) 119, 131, 138, 283, 331, 358, 781
NlaIV GGNNCC 2 cut(s) 498, 499
NruI TCGCGA 1 cut(s) 715
PagI TCATGA 1 cut(s) 279
PfeI GAWTC 4 cut(s) 60, 276, 606, 736
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 3 cut(s) 205, 340, 520
PpuMI RGGWCCY 1 cut(s) 497
Psp5II RGGWCCY 1 cut(s) 497
Psp6I CCWGG 1 cut(s) 409
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 2 cut(s) 498, 499
PspPI GGNCC 4 cut(s) 319, 413, 497, 530
PspPPI RGGWCCY 1 cut(s) 497
PstI CTGCAG 1 cut(s) 388
PstNI CAGNNNCTG 2 cut(s) 63, 209
RruI TCGCGA 1 cut(s) 715
RsaI GTAC 2 cut(s) 146, 557
RsaNI GTAC 2 cut(s) 145, 556
RseI CAYNNNNRTG 3 cut(s) 314, 353, 782
SaqAI TTAA 2 cut(s) 431, 581
SatI GCNGC 3 cut(s) 204, 339, 519
Sau3AI GATC 5 cut(s) 490, 656, 726, 759, 772
Sau96I GGNCC 4 cut(s) 319, 413, 497, 530
ScrFI CCNGG 1 cut(s) 411
SetI ASST 8 cut(s) 124, 153, 170, 201, 261, 807, 819, 828
SfaNI GCATC 2 cut(s) 76, 215
SfcI CTRYAG 1 cut(s) 384
SinI GGWCC 2 cut(s) 413, 497
SmiMI CAYNNNNRTG 3 cut(s) 314, 353, 782
SmlI CTYRAG 2 cut(s) 800, 818
SmoI CTYRAG 2 cut(s) 800, 818
Sse9I AATT 4 cut(s) 171, 362, 479, 755
SsiI CCGC 5 cut(s) 399, 516, 519, 740, 797
SspMI CTAG 4 cut(s) 194, 200, 587, 792
StyD4I CCNGG 1 cut(s) 409
StyI CCWWGG 2 cut(s) 354, 597
TaaI ACNGT 1 cut(s) 458
TaiI ACGT 1 cut(s) 261
TaqI TCGA 1 cut(s) 423
TasI AATT 4 cut(s) 171, 362, 479, 755
TauI GCSGC 1 cut(s) 521
TfiI GAWTC 4 cut(s) 60, 276, 606, 736
Tru1I TTAA 2 cut(s) 431, 581
Tru9I TTAA 2 cut(s) 431, 581
TseI GCWGC 2 cut(s) 203, 338
TspDTI ATGAA 6 cut(s) 104, 230, 268, 296, 664, 762
Van91I CCANNNNNTGG 1 cut(s) 328
VpaK11BI GGWCC 2 cut(s) 413, 497
XagI CCTNNNNNAGG 1 cut(s) 821
XapI RAATTY 1 cut(s) 362
XbaI TCTAGA 1 cut(s) 791
XcmI CCANNNNNNNNNTGG 1 cut(s) 329
XspI CTAG 4 cut(s) 194, 200, 587, 792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.