Rorug01G0084900

salicylic acid-binding protein 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
13816163 .. 13827972
11810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0084900.1

Sequence Viewer

Length: 2940 bp
ATGTGCTTTTTTATTGCAATTTTCAGACATGAGTCCAAGTTCATCAAGAAAATTGTTACTGTAATTGAAGAAAAGTTATGCCGCACATCTTTGAGTGTTACTCCATACCTGATTGGAATAGATTCTCAAGTGAACTCAATTGATACATGGGTGCAAGATGAATCATCTGAGGTTGGTATGTTCGTAATATATGGGATGGCCGGAGTGGGAAAGACAACACTAGCAAAATATGTCTACAATTCCAACTTCAAAAGATTTGATGGAAGTAGTTTCCTTGAAAATATCAGTGAAGTTTCAAGACAAGCCGATGGTTTGGTTCGTTTACAAAGACAACTTATTTCAAACATCTCAAGAAGGTCAGAGATAAACATAAACAATGTCAGTGAAGGCACTAATAAAATTAGAGATGTCATCAGATCAAAACGAGTTATTGTTGTTCTTGATGATGTGGATCAACTGGATCAACTTAATGCAATCCTTGGGATGAGGGATTGGTTCCATCCAGGAAGTAAAATCATTATAACAACTCGGCAAAGATTGTTGAAGGCTCATGAGGTGCATAAGTTGTACGAGGTAAGGAAATTGTACAACTATGAAGCATTAAAGCTCTTTAGTTGGCATGCTTTTGGACAAGACCAACCTTTTGAAGATTACTTATATTATTCATATAAGATAGCAGACCATTGTGGAGGACTTCCATTAGCTCTTCAGATCTTGGGTTCTTCTCTATCTGGGAAACCTACGGATGTATGGGAAAGTGCATGGAGGAAATTGAAGGATATTCCAAACACTGAGATCCTAAAAAAGCTCAAACTGAGCTATGACACTTTACAAGATGACCATGACCAAAATTTATTCCTCGATATTGCTTGTTTCTTCATTGGAGAGGACAAAGATTTCATAGTTGGAATTCTAGACGAATGTGATTTTCACACAAAAATTGGAATTCAGAATCTCATTGATAGATGTATGATTACTGTTGATTTAAACAATAAGGTGGTCATGCATCGACTGCTTCGTGACATGGGTAGAGAAATTATTCGCCAAGAGTCACCTAAAGAACCTAGTAAACGTAGTAGAGTATGGAATCCTAAGGATTCCTTCAATGTACTGACTGAAAAGATGGGGGGGGAAACAATTGAAGGAATCGTTGTGAATATGCATAATGAAGACACTCCTTTGAGGAATTCAACTGAGGCAGCAATCTGGGAAACAAATGCATTTGCACAGATGCATAAACTGAGACTACTCATACTAAATCATGTGCAACTCAATGGATATTATACTTCTTTTCCCAAAAGGTTAAGATGGTTGAGTTGGTCTGGATTTCCTTTGGACTCTATACCTGGCGATTTGAATTTGCAGAACCTGATTGCCCTGGACATGCGTTATAGCATGCTGAAACGAGTCTGGAAATATTCAAAGCGCCTTCCGTTATTGAAGATCCTTGATCTAAGCCATTCTGGTAGCCTTACCAAAACTCCTGATTTCTCATTTCTCCCCAAACTAGAGAGAGTGATCCTTAAAGATTGTTCAAGCTTGGTCGATGTCCATGAATCCATTGGAAACTTAGACAGACTTGTTTACCTGAACATGAATGATTGCAAAAGTATTAAGAAGCTTCCGAAGAACTTCTGTAAGTTGGAATTCCTTGAAACACTTCTTCTCACTGGTTGCTCGAGTCTTAATGACTTCCCAATAGAGGATTTGTGGATGATGAGATCTCTGAAAGTTTTCAGAGCCGATGGTACTCCAGTGAACCAATCACTTAATTCCATCCAGGGGAAAAACAAGTTATCCCCTTCTTTTCCACGCTATCTAGTAAGCATTAGTCTCGTGAATTGCAATTTGCAGTCTGAAGATGCTTTTCCCTTGAGTCTTGCTAACCTATCCGGACTGCGAGACTTGAACCTTAGTGAAAATCCAATTGTTCACCTACCAGATAGCATCAGAAATCTTCCTGAACTCAATCGACTTGATTTTACCAACTGCACAAGACTTGAAGTACTTGTAGGGTTACCAAAAGTAGACACTTTGGTTGTGTCATTTTGCTCAGCATTGAGAATTGTAACATTTAAATCAGCTGATTGTAGATCATTAAATCTGGAGAGGGTTGATAACAAGAGTCTAGTTGAGTTTGAATATTGGTTCAAATTAGAGCCTGTTGCAGAAGTTGACCCAGAACTGATTAATCTCTTGGGAGTAAACTTGAGGTCTCTGCATGGCATTCTTATTGATATGCACTCTGTCACTTGGCTTGGTATTCAAAGGCTTCCCATCCAGGGACTTCATGAACATGGTATATTCAGCATCTTCTTTCCAGCTCTAGGGAATGAGATTCCAGGAGTGTTCAGCCATACAAGCAGGGATTCCTCAATTTCTTTTACTGTGCCTATGCTTCCAGATGTCAGGATTCAGGGCTTGAATGTCTATTGTGTGTATGCAACTGATGACACTGACCATAATGAACTTATTATCACCGATGATCATGATGCTTCACCGAAGGATATGATGATACAGGTTTACAATATGAGCACGGGTGTGAAGTGGATCTATGCTCCGTTGTTCTTCGGCTATCCGGATGAAGGAAAAGACATGATATGGTTGAGCTATTGGAAGTTAGACAATCAACTGGGAAATGGTGATGAAGCAACTGTTTCTATATTTGCCAATTCTAGGTTTACATTGAAAGAATGTGGCATCCAAATTGTGTACGAGCCAGAAAAGGATATGAGTGGCCAAGACAACAATAACAGTATCAACTCTAATATTCCTTCAAAACATGGAGGTATTTGTGGATATTGGACAGACTTTGAGGTGTCGCCAGGCACATACATCCTCATGGATGGACCTGCGCCACCTGAAGGATATACTCCTAGAAGCAAAATGTGGACACGGTTCCGTCCTATGAGTGAGATAAAAGTACACTCAGGTATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

979

Amino Acids

111.86

Weight (kDa)

6.1

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 44 - 210 1.6e-21 NB-ARC domain
ATPase_2 PF01637 44 - 157 7.6e-07 ATPase domain predominantly from Archaea
WHD_ROQ1 PF23282 280 - 351 1.2e-20 Disease resistance protein Roq1-like, winged-helix domain
LRR_13 PF23286 499 - 689 1e-05 Disease resistance protein RPS4B-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 521
Acc36I ACCTGC 1 cut(s) 2860
AccI GTMKAC 2 cut(s) 234, 2028
AccIII TCCGGA 2 cut(s) 1892, 2578
AciI CCGC 1 cut(s) 82
AclWI GGATC 6 cut(s) 459, 468, 790, 1438, 1513, 2558
AcoI YGGCCR 2 cut(s) 198, 2737
AcsI RAATTY 6 cut(s) 850, 909, 945, 1186, 1357, 1646
AcuI CTGAAG 3 cut(s) 692, 1878, 2883
AfaI GTAC 7 cut(s) 569, 587, 1110, 1750, 2007, 2714, 2925
AfiI CCNNNNNNNGG 7 cut(s) 1702, 1782, 2282, 2327, 2585, 2676, 2864
AjnI CCWGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
AleI CACNNNNGTG 1 cut(s) 2540
AluBI AGCT 9 cut(s) 607, 704, 808, 819, 1539, 1621, 2084, 2324, 2610
AluI AGCT 9 cut(s) 607, 704, 808, 819, 1539, 1621, 2084, 2324, 2610
Alw21I GWGCWC 1 cut(s) 2537
Alw26I GTCTC 4 cut(s) 1237, 1838, 1896, 2220
AlwI GGATC 6 cut(s) 459, 468, 790, 1438, 1513, 2558
AlwNI CAGNNNCTG 1 cut(s) 1369
Ama87I CYCGRG 1 cut(s) 1678
Aor13HI TCCGGA 2 cut(s) 1892, 2578
AoxI GGCC 2 cut(s) 198, 2737
ApeKI GCWGC 1 cut(s) 1199
ApoI RAATTY 6 cut(s) 850, 909, 945, 1186, 1357, 1646
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
AseI ATTAAT 1 cut(s) 2190
Asp700I GAANNNNTTC 5 cut(s) 121, 1038, 1631, 1659, 1733
AspLEI GCGC 2 cut(s) 1428, 2857
AspS9I GGNCC 1 cut(s) 2849
AsuHPI GGTGA 5 cut(s) 1044, 1925, 2470, 2490, 2654
AvaI CYCGRG 1 cut(s) 1678
AvaII GGWCC 1 cut(s) 2849
AxyI CCTNAGG 1 cut(s) 1092
BaeI ACNNNNGTAYC 4 cut(s) 135, 168, 1740, 1773
BalI TGGCCA 1 cut(s) 2739
BauI CACGAG 1 cut(s) 1835
BbsI GAAGAC 1 cut(s) 1176
Bbv12I GWGCWC 1 cut(s) 2537
BbvI GCAGC 1 cut(s) 1211
BcgI CGANNNNNNTGC 2 cut(s) 1816, 1850
BciT130I CCWGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
BclI TGATCA 1 cut(s) 2485
BcoDI GTCTC 4 cut(s) 1237, 1838, 1896, 2220
BfaI CTAG 9 cut(s) 221, 914, 1065, 1508, 1820, 2129, 2327, 2676, 2877
BfoI RGCGCY 1 cut(s) 1429
BfuAI ACCTGC 1 cut(s) 2860
BglII AGATCT 2 cut(s) 711, 1721
BisI GCNGC 2 cut(s) 82, 1200
BlpI GCTNAGC 1 cut(s) 2053
BlsI GCNGC 2 cut(s) 83, 1201
BmcAI AGTACT 1 cut(s) 2007
Bme1390I CCNGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
Bme18I GGWCC 1 cut(s) 2849
BmeT110I CYCGRG 1 cut(s) 1678
BmgT120I GGNCC 1 cut(s) 2849
BmiI GGNNCC 2 cut(s) 497, 2900
BmrFI CCNGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
BmrI ACTGGG 1 cut(s) 2642
BmsI GCATC 7 cut(s) 1015, 1221, 1852, 1956, 2319, 2482, 2709
BmuI ACTGGG 1 cut(s) 2642
BoxI GACNNNNGTC 1 cut(s) 31
BpiI GAAGAC 1 cut(s) 1176
BplI GAGNNNNNCTC 2 cut(s) 85, 117
BpmI CTGGAG 2 cut(s) 1737, 2126
Bpu1102I GCTNAGC 1 cut(s) 2053
BpuEI CTTGAG 4 cut(s) 111, 334, 1894, 2230
BsaBI GATNNNNATC 1 cut(s) 450
BsaI GGTCTC 1 cut(s) 2220
BsaJI CCNNGG 4 cut(s) 478, 1377, 1780, 2281
BsaWI WCCGGW 2 cut(s) 1892, 2578
BsaXI ACNNNNNCTCC 2 cut(s) 1465, 1495
Bsc4I CCNNNNNNNGG 7 cut(s) 1702, 1782, 2282, 2327, 2585, 2676, 2864
Bse1I ACTGG 4 cut(s) 462, 1675, 1754, 2637
Bse21I CCTNAGG 1 cut(s) 1092
Bse8I GATNNNNATC 1 cut(s) 450
BseAI TCCGGA 2 cut(s) 1892, 2578
BseBI CCWGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
BseDI CCNNGG 4 cut(s) 478, 1377, 1780, 2281
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 7 cut(s) 1702, 1782, 2282, 2327, 2585, 2676, 2864
BseMII CTCAG 6 cut(s) 159, 783, 806, 1185, 1232, 2067
BseNI ACTGG 4 cut(s) 462, 1675, 1754, 2637
BseXI GCAGC 1 cut(s) 1211
BsgI GTGCAG 1 cut(s) 1975
BshFI GGCC 2 cut(s) 200, 2739
BsiHKAI GWGCWC 1 cut(s) 2537
BsiHKCI CYCGRG 1 cut(s) 1678
BsiSI CCGG 3 cut(s) 201, 1893, 2579
BslFI GGGAC 1 cut(s) 2298
BslI CCNNNNNNNGG 7 cut(s) 1702, 1782, 2282, 2327, 2585, 2676, 2864
BsmAI GTCTC 4 cut(s) 1237, 1838, 1896, 2220
BsmFI GGGAC 1 cut(s) 2298
BsmI GAATGC 1 cut(s) 2226
BsnI GGCC 2 cut(s) 200, 2739
Bso31I GGTCTC 1 cut(s) 2220
BsoBI CYCGRG 1 cut(s) 1678
Bsp1286I GDGCHC 1 cut(s) 2537
Bsp13I TCCGGA 2 cut(s) 1892, 2578
Bsp1407I TGTACA 1 cut(s) 585
Bsp1720I GCTNAGC 1 cut(s) 2053
BspACI CCGC 1 cut(s) 82
BspANI GGCC 2 cut(s) 200, 2739
BspCNI CTCAG 6 cut(s) 160, 784, 807, 1186, 1233, 2066
BspEI TCCGGA 2 cut(s) 1892, 2578
BspHI TCATGA 3 cut(s) 550, 2290, 2488
BspLI GGNNCC 2 cut(s) 497, 2900
BspMI ACCTGC 1 cut(s) 2860
BspPI GGATC 6 cut(s) 459, 468, 790, 1438, 1513, 2558
BspQI GCTCTTC 1 cut(s) 711
BspTNI GGTCTC 1 cut(s) 2220
BsrGI TGTACA 1 cut(s) 585
BsrI ACTGG 4 cut(s) 462, 1675, 1754, 2637
BssECI CCNNGG 4 cut(s) 478, 1377, 1780, 2281
BssSI CACGAG 1 cut(s) 1835
BssT1I CCWWGG 1 cut(s) 478
Bst2BI CACGAG 1 cut(s) 1835
Bst2UI CCWGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
Bst4CI ACNGT 6 cut(s) 61, 979, 2389, 2656, 2756, 2898
Bst6I CTCTTC 1 cut(s) 711
BstAPI GCANNNNNTGC 1 cut(s) 1012
BstAUI TGTACA 1 cut(s) 585
BstC8I GCNNGC 2 cut(s) 621, 1397
BstEII GGTNACC 1 cut(s) 2016
BstH2I RGCGCY 1 cut(s) 1429
BstHHI GCGC 2 cut(s) 1428, 2857
BstMAI GTCTC 4 cut(s) 1237, 1838, 1896, 2220
BstMWI GCNNNNNNNGC 2 cut(s) 1012, 2361
BstNI CCWGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
BstNSI RCATGY 3 cut(s) 623, 1387, 1399
BstPAI GACNNNNGTC 1 cut(s) 31
BstPI GGTNACC 1 cut(s) 2016
BstSCI CCNGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
BstV1I GCAGC 1 cut(s) 1211
BstV2I GAAGAC 1 cut(s) 1176
BstX2I RGATCY 5 cut(s) 711, 795, 1443, 1721, 2550
BstYI RGATCY 5 cut(s) 711, 795, 1443, 1721, 2550
Bsu36I CCTNAGG 1 cut(s) 1092
BsuRI GGCC 2 cut(s) 200, 2739
BtsIMutI CAGTG 6 cut(s) 292, 388, 789, 1668, 1761, 2454
BveI ACCTGC 1 cut(s) 2860
Cac8I GCNNGC 2 cut(s) 621, 1397
CaiI CAGNNNCTG 1 cut(s) 1369
CciI TCATGA 3 cut(s) 550, 2290, 2488
CfoI GCGC 2 cut(s) 1428, 2857
Cfr13I GGNCC 1 cut(s) 2849
Csp6I GTAC 7 cut(s) 568, 586, 1109, 1749, 2006, 2713, 2924
CviQI GTAC 7 cut(s) 568, 586, 1109, 1749, 2006, 2713, 2924
DraI TTTAAA 2 cut(s) 987, 2077
EaeI YGGCCR 2 cut(s) 198, 2737
Eam1104I CTCTTC 1 cut(s) 711
EarI CTCTTC 1 cut(s) 711
Eco130I CCWWGG 1 cut(s) 478
Eco31I GGTCTC 1 cut(s) 2220
Eco47I GGWCC 1 cut(s) 2849
Eco57I CTGAAG 3 cut(s) 692, 1878, 2883
Eco81I CCTNAGG 1 cut(s) 1092
Eco88I CYCGRG 1 cut(s) 1678
Eco91I GGTNACC 1 cut(s) 2016
EcoO65I GGTNACC 1 cut(s) 2016
EcoRI GAATTC 4 cut(s) 909, 945, 1186, 1646
EcoRII CCWGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
EcoT14I CCWWGG 1 cut(s) 478
EcoT22I ATGCAT 4 cut(s) 1008, 1164, 1222, 1236
ErhI CCWWGG 1 cut(s) 478
FalI AAGNNNNNCTT 2 cut(s) 1085, 1117
FaqI GGGAC 1 cut(s) 2298
FbaI TGATCA 1 cut(s) 2485
FblI GTMKAC 2 cut(s) 234, 2028
Fnu4HI GCNGC 2 cut(s) 82, 1200
Fsp4HI GCNGC 2 cut(s) 82, 1200
FspBI CTAG 9 cut(s) 221, 914, 1065, 1508, 1820, 2129, 2327, 2676, 2877
GlaI GCGC 2 cut(s) 1427, 2856
GluI GCNGC 2 cut(s) 82, 1200
GsuI CTGGAG 2 cut(s) 1737, 2126
HaeII RGCGCY 1 cut(s) 1429
HaeIII GGCC 2 cut(s) 200, 2739
HapII CCGG 3 cut(s) 201, 1893, 2579
HhaI GCGC 2 cut(s) 1428, 2857
Hin6I GCGC 2 cut(s) 1426, 2855
HinP1I GCGC 2 cut(s) 1426, 2855
HincII GTYRAC 1 cut(s) 2176
HindII GTYRAC 1 cut(s) 2176
HindIII AAGCTT 2 cut(s) 1537, 1619
HpaII CCGG 3 cut(s) 201, 1893, 2579
HphI GGTGA 5 cut(s) 1044, 1925, 2470, 2490, 2654
HpyCH4III ACNGT 6 cut(s) 61, 979, 2389, 2656, 2756, 2898
HpyCH4IV ACGT 1 cut(s) 1072
HpyF10VI GCNNNNNNNGC 2 cut(s) 1012, 2361
HpySE526I ACGT 1 cut(s) 1072
HspAI GCGC 2 cut(s) 1426, 2855
Kpn2I TCCGGA 2 cut(s) 1892, 2578
Ksp22I TGATCA 1 cut(s) 2485
LguI GCTCTTC 1 cut(s) 711
LmnI GCTCC 1 cut(s) 2563
Lsp1109I GCAGC 1 cut(s) 1211
LweI GCATC 7 cut(s) 1015, 1221, 1852, 1956, 2319, 2482, 2709
MaeI CTAG 9 cut(s) 221, 914, 1065, 1508, 1820, 2129, 2327, 2676, 2877
MaeII ACGT 1 cut(s) 1072
MaeIII GTNAC 7 cut(s) 55, 97, 1019, 1050, 2016, 2068, 2248
MfeI CAATTG 3 cut(s) 138, 1137, 1926
MflI RGATCY 5 cut(s) 711, 795, 1443, 1721, 2550
MhlI GDGCHC 1 cut(s) 2537
MlsI TGGCCA 1 cut(s) 2739
MluNI TGGCCA 1 cut(s) 2739
MlyI GAGTC 7 cut(s) 41, 1058, 1331, 1416, 1690, 1885, 2134
MmeI TCCRAC 3 cut(s) 267, 886, 1623
Mox20I TGGCCA 1 cut(s) 2739
Mph1103I ATGCAT 4 cut(s) 1008, 1164, 1222, 1236
MroI TCCGGA 2 cut(s) 1892, 2578
MroXI GAANNNNTTC 5 cut(s) 121, 1038, 1631, 1659, 1733
MscI TGGCCA 1 cut(s) 2739
MslI CAYNNNNRTG 3 cut(s) 2295, 2540, 2840
Msp20I TGGCCA 1 cut(s) 2739
MspA1I CMGCKG 1 cut(s) 2084
MspI CCGG 3 cut(s) 201, 1893, 2579
MspR9I CCNGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
MunI CAATTG 3 cut(s) 138, 1137, 1926
Mva1269I GAATGC 1 cut(s) 2226
MvaI CCWGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
MwoI GCNNNNNNNGC 2 cut(s) 1012, 2361
NlaIV GGNNCC 2 cut(s) 497, 2900
NmeAIII GCCGAG 1 cut(s) 508
NmuCI GTSAC 3 cut(s) 1019, 1050, 2248
NsiI ATGCAT 4 cut(s) 1008, 1164, 1222, 1236
NspI RCATGY 3 cut(s) 623, 1387, 1399
OliI CACNNNNGTG 1 cut(s) 2540
PaeI GCATGC 2 cut(s) 623, 1399
PaeR7I CTCGAG 1 cut(s) 1678
PagI TCATGA 3 cut(s) 550, 2290, 2488
PciSI GCTCTTC 1 cut(s) 711
PcsI WCGNNNNNNNCGW 1 cut(s) 1015
PctI GAATGC 1 cut(s) 2226
PdmI GAANNNNTTC 5 cut(s) 121, 1038, 1631, 1659, 1733
PfoI TCCNGGA 2 cut(s) 502, 2341
PkrI GCNGC 2 cut(s) 83, 1201
PleI GAGTC 7 cut(s) 40, 1057, 1331, 1415, 1689, 1884, 2133
PpsI GAGTC 7 cut(s) 40, 1057, 1331, 1415, 1689, 1884, 2133
PshAI GACNNNNGTC 1 cut(s) 31
PshBI ATTAAT 1 cut(s) 2190
PsiI TTATAA 1 cut(s) 521
Psp6I CCWGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
PspEI GGTNACC 1 cut(s) 2016
PspGI CCWGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
PspN4I GGNNCC 2 cut(s) 497, 2900
PspPI GGNCC 1 cut(s) 2849
PspXI VCTCGAGB 1 cut(s) 1678
PstNI CAGNNNCTG 1 cut(s) 1369
PsuI RGATCY 5 cut(s) 711, 795, 1443, 1721, 2550
PvuII CAGCTG 1 cut(s) 2084
RsaI GTAC 7 cut(s) 569, 587, 1110, 1750, 2007, 2714, 2925
RsaNI GTAC 7 cut(s) 568, 586, 1109, 1749, 2006, 2713, 2924
RseI CAYNNNNRTG 3 cut(s) 2295, 2540, 2840
SapI GCTCTTC 1 cut(s) 711
SatI GCNGC 2 cut(s) 82, 1200
Sau96I GGNCC 1 cut(s) 2849
ScaI AGTACT 1 cut(s) 2007
SchI GAGTC 7 cut(s) 41, 1058, 1331, 1416, 1690, 1885, 2134
ScrFI CCNGG 7 cut(s) 504, 1347, 1379, 1781, 2282, 2343, 2826
SduI GDGCHC 1 cut(s) 2537
SfaNI GCATC 7 cut(s) 1015, 1221, 1852, 1956, 2319, 2482, 2709
Sfr274I CTCGAG 1 cut(s) 1678
SinI GGWCC 1 cut(s) 2849
SlaI CTCGAG 1 cut(s) 1678
SmiI ATTTAAAT 1 cut(s) 2077
SmiMI CAYNNNNRTG 3 cut(s) 2295, 2540, 2840
SmlI CTYRAG 5 cut(s) 126, 349, 1678, 1873, 2209
SmoI CTYRAG 5 cut(s) 126, 349, 1678, 1873, 2209
SphI GCATGC 2 cut(s) 623, 1399
SsiI CCGC 1 cut(s) 82
SspI AATATT 3 cut(s) 1418, 2144, 2770
SspMI CTAG 9 cut(s) 221, 914, 1065, 1508, 1820, 2129, 2327, 2676, 2877
StyD4I CCNGG 7 cut(s) 502, 1345, 1377, 1779, 2280, 2341, 2824
StyI CCWWGG 1 cut(s) 478
SwaI ATTTAAAT 1 cut(s) 2077
TaaI ACNGT 6 cut(s) 61, 979, 2389, 2656, 2756, 2898
TaiI ACGT 1 cut(s) 1075
TaqI TCGA 5 cut(s) 861, 1009, 1545, 1679, 1972
TatI WGTACW 4 cut(s) 585, 1108, 2005, 2923
TauI GCSGC 1 cut(s) 84
TscAI CASTG 6 cut(s) 292, 388, 796, 1675, 1761, 2461
TseFI GTSAC 3 cut(s) 1019, 1050, 2248
TseI GCWGC 1 cut(s) 1199
Tsp45I GTSAC 3 cut(s) 1019, 1050, 2248
TspGWI ACGGA 4 cut(s) 758, 1422, 2550, 2891
TspRI CASTG 6 cut(s) 292, 388, 796, 1675, 1761, 2461
VpaK11BI GGWCC 1 cut(s) 2849
VspI ATTAAT 1 cut(s) 2190
XapI RAATTY 6 cut(s) 850, 909, 945, 1186, 1357, 1646
XbaI TCTAGA 1 cut(s) 913
XceI RCATGY 3 cut(s) 623, 1387, 1399
XcmI CCANNNNNNNNNTGG 1 cut(s) 1559
XhoI CTCGAG 1 cut(s) 1678
XmiI GTMKAC 2 cut(s) 234, 2028
XmnI GAANNNNTTC 5 cut(s) 121, 1038, 1631, 1659, 1733
XspI CTAG 9 cut(s) 221, 914, 1065, 1508, 1820, 2129, 2327, 2676, 2877
ZrmI AGTACT 1 cut(s) 2007
Zsp2I ATGCAT 4 cut(s) 1008, 1164, 1222, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.