Rmu_sc0013732.1_g000001

Methylketone synthase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0013732.1
Physical Location & Seq
Reverse (-)
1 .. 390
390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0013732.1_g000001.1.cds

Sequence Viewer

Length: 291 bp
atgattgtgatgaaaatggaaaatatgagagtgaagcattttgctttgccttttcttgtgcttctttgcttggcaagaatctgtagcaatagtcttacagctgatcactatccagaccaaatcctctttgggaagaagcattttgtgctggttcatggagccggtcacggagcttggtgttggtataagttggcaactctattgacctccacaggtcacaatgttacaacactagaccttgcagcatctgggatcaaccagatccaggtagagcaagttcatcctggagag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.8

Weight (kDa)

7.82

Isoelectric Point (pI)

16.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 256, 260
AfiI CCNNNNNNNGG 1 cut(s) 265
AjnI CCWGG 2 cut(s) 264, 283
AluBI AGCT 2 cut(s) 101, 173
AluI AGCT 2 cut(s) 101, 173
AlwI GGATC 2 cut(s) 256, 260
AlwNI CAGNNNCTG 1 cut(s) 248
ApeKI GCWGC 1 cut(s) 242
BbvI GCAGC 1 cut(s) 254
BciT130I CCWGG 2 cut(s) 266, 285
BclI TGATCA 1 cut(s) 103
BfaI CTAG 1 cut(s) 233
BfmI CTRYAG 1 cut(s) 82
BisI GCNGC 1 cut(s) 243
BlsI GCNGC 1 cut(s) 244
Bme1390I CCNGG 2 cut(s) 266, 285
BmiI GGNNCC 1 cut(s) 160
BmrFI CCNGG 2 cut(s) 266, 285
BmsI GCATC 1 cut(s) 254
BsaBI GATNNNNATC 1 cut(s) 108
Bsc4I CCNNNNNNNGG 1 cut(s) 265
Bse118I RCCGGY 1 cut(s) 161
Bse8I GATNNNNATC 1 cut(s) 108
BseBI CCWGG 2 cut(s) 266, 285
BseGI GGATG 1 cut(s) 280
BseJI GATNNNNATC 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 265
BseXI GCAGC 1 cut(s) 254
BsiSI CCGG 1 cut(s) 162
BslI CCNNNNNNNGG 1 cut(s) 265
Bsp143I GATC 3 cut(s) 103, 252, 261
BspLI GGNNCC 1 cut(s) 160
BspPI GGATC 2 cut(s) 256, 260
BsrFI RCCGGY 1 cut(s) 161
BssAI RCCGGY 1 cut(s) 161
BssMI GATC 3 cut(s) 103, 252, 261
Bst2UI CCWGG 2 cut(s) 266, 285
BstAPI GCANNNNNTGC 1 cut(s) 145
BstF5I GGATG 1 cut(s) 280
BstKTI GATC 3 cut(s) 106, 255, 264
BstMBI GATC 3 cut(s) 103, 252, 261
BstMWI GCNNNNNNNGC 1 cut(s) 145
BstNI CCWGG 2 cut(s) 266, 285
BstSCI CCNGG 2 cut(s) 264, 283
BstSFI CTRYAG 1 cut(s) 82
BstV1I GCAGC 1 cut(s) 254
BstX2I RGATCY 1 cut(s) 261
BstYI RGATCY 1 cut(s) 261
BtsCI GGATG 1 cut(s) 280
CaiI CAGNNNCTG 1 cut(s) 248
Cfr10I RCCGGY 1 cut(s) 161
CviAII CATG 1 cut(s) 155
CviJI RGCY 3 cut(s) 101, 161, 173
CviKI_1 RGCY 3 cut(s) 101, 161, 173
DpnI GATC 3 cut(s) 105, 254, 263
DpnII GATC 3 cut(s) 103, 252, 261
EcoRII CCWGG 2 cut(s) 264, 283
FaeI CATG 1 cut(s) 158
FaiI YATR 3 cut(s) 26, 156, 186
FatI CATG 1 cut(s) 154
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 1 cut(s) 243
FokI GGATG 1 cut(s) 267
Fsp4HI GCNGC 1 cut(s) 243
FspBI CTAG 1 cut(s) 233
GluI GCNGC 1 cut(s) 243
HapII CCGG 1 cut(s) 162
Hin1II CATG 1 cut(s) 158
HinfI GANTC 1 cut(s) 78
HpaII CCGG 1 cut(s) 162
Hpy188III TCNNGA 1 cut(s) 113
HpyCH4V TGCA 1 cut(s) 242
HpyF10VI GCNNNNNNNGC 1 cut(s) 145
Hsp92II CATG 1 cut(s) 158
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 3 cut(s) 103, 252, 261
LmnI GCTCC 2 cut(s) 158, 170
LpnPI CCDG 9 cut(s) 126, 134, 175, 198, 234, 251, 270, 272, 278
Lsp1109I GCAGC 1 cut(s) 254
LweI GCATC 1 cut(s) 254
MaeI CTAG 1 cut(s) 233
MaeIII GTNAC 3 cut(s) 164, 215, 223
MalI GATC 3 cut(s) 105, 254, 263
MboI GATC 3 cut(s) 103, 252, 261
MboII GAAGA 1 cut(s) 145
MflI RGATCY 1 cut(s) 261
MnlI CCTC 2 cut(s) 134, 217
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 1 cut(s) 162
MspR9I CCNGG 2 cut(s) 266, 285
MvaI CCWGG 2 cut(s) 266, 285
MwoI GCNNNNNNNGC 1 cut(s) 145
NdeII GATC 3 cut(s) 103, 252, 261
NlaIII CATG 1 cut(s) 158
NlaIV GGNNCC 1 cut(s) 160
NmuCI GTSAC 2 cut(s) 164, 215
PfeI GAWTC 1 cut(s) 78
PfoI TCCNGGA 1 cut(s) 283
PkrI GCNGC 1 cut(s) 244
Psp6I CCWGG 2 cut(s) 264, 283
PspGI CCWGG 2 cut(s) 264, 283
PspN4I GGNNCC 1 cut(s) 160
PsrI GAACNNNNNNTAC 1 cut(s) 261
PstNI CAGNNNCTG 1 cut(s) 248
PsuI RGATCY 1 cut(s) 261
PvuII CAGCTG 1 cut(s) 101
SatI GCNGC 1 cut(s) 243
Sau3AI GATC 3 cut(s) 103, 252, 261
ScrFI CCNGG 2 cut(s) 266, 285
SetI ASST 6 cut(s) 103, 175, 209, 217, 240, 270
SfaNI GCATC 1 cut(s) 254
SfcI CTRYAG 1 cut(s) 82
SspMI CTAG 1 cut(s) 233
StyD4I CCNGG 2 cut(s) 264, 283
TfiI GAWTC 1 cut(s) 78
TseFI GTSAC 2 cut(s) 164, 215
TseI GCWGC 1 cut(s) 242
Tsp45I GTSAC 2 cut(s) 164, 215
TspDTI ATGAA 3 cut(s) 26, 143, 269
TspGWI ACGGA 1 cut(s) 183
XcmI CCANNNNNNNNNTGG 1 cut(s) 125
XspI CTAG 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.