MD02G1161900.v1.1

salicylic acid-binding protein 2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
13627192 .. 13628144
953 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1161900.v1.1.491

Sequence Viewer

Length: 573 bp
ATGGAGACTCTCCCACCAGAGGAGAGCGTTATCCTGGTAGGCCACAGCTTCGGTGGGCCCGTCATATCTATTGCCATGGAGATGTTTCCTGAGAAAATATTGGCGGCCGTTTTCGCCACCGCTTTCATGCCTAGTCCTACTTTCAGTTACCCTCATATAATAGAGAAGATGTTTGCTGATGTGGATTTGATGGACTATCACCATAGATTTGATAACGGACCCAACAATCCTCCAACTTCGGCAATTTTCGGGCCTAAGATCATGTCGTTACTATTGTACCAGCTCTCGCCACCAGAGGATGTAAAACTAGTATCATCCTTGTTGAGGTTCTGTCCTGTACTGATTCATGATGAAATAAAACTCACCAAAGAGAAATATGGATCAGTTCGTAAAGTGTTTATTGTGTGCGACCAAGATCTTATAATACCGGAGAAATGGCAGAGGTGGATGATCGATGAAAATCCGCCGAATGAAGTGCAGGTGATAAATGGTGCTGATCACATGGTAATGTTCTCTAAACCGCAGGAGTTGTTCACCTGCCTCCAGGCGATTGCTGTATCATCATCATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

191

Amino Acids

21.47

Weight (kDa)

5.04

Isoelectric Point (pI)

55.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 8 - 174 1.1e-06 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 9 - 177 6.2e-11 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 422
AarI CACCTGC 2 cut(s) 469, 545
Acc36I ACCTGC 2 cut(s) 469, 545
AciI CCGC 4 cut(s) 104, 120, 464, 521
AclWI GGATC 1 cut(s) 388
AcoI YGGCCR 1 cut(s) 105
AfaI GTAC 2 cut(s) 278, 339
AfiI CCNNNNNNNGG 2 cut(s) 19, 324
AhlI ACTAGT 1 cut(s) 307
AjnI CCWGG 2 cut(s) 33, 543
AluBI AGCT 2 cut(s) 48, 283
AluI AGCT 2 cut(s) 48, 283
AlwI GGATC 1 cut(s) 388
AoxI GGCC 4 cut(s) 40, 56, 105, 251
ApaI GGGCCC 1 cut(s) 60
AspS9I GGNCC 4 cut(s) 56, 57, 218, 251
AsuHPI GGTGA 4 cut(s) 191, 355, 493, 526
AvaII GGWCC 1 cut(s) 218
BaeGI GKGCMC 1 cut(s) 60
BaeI ACNNNNGTAYC 2 cut(s) 260, 293
BanII GRGCYC 1 cut(s) 60
BccI CCATC 1 cut(s) 184
BceAI ACGGC 1 cut(s) 92
BcgI CGANNNNNNTGC 2 cut(s) 457, 491
BciT130I CCWGG 2 cut(s) 35, 545
BclI TGATCA 1 cut(s) 496
BcuI ACTAGT 1 cut(s) 307
BfaI CTAG 3 cut(s) 132, 308, 571
BfuAI ACCTGC 2 cut(s) 469, 545
BglII AGATCT 1 cut(s) 415
BisI GCNGC 1 cut(s) 105
BlsI GCNGC 1 cut(s) 106
Bme1390I CCNGG 2 cut(s) 35, 545
Bme18I GGWCC 1 cut(s) 218
BmgT120I GGNCC 4 cut(s) 56, 57, 218, 251
BmiI GGNNCC 2 cut(s) 58, 220
BmrFI CCNGG 2 cut(s) 35, 545
BpmI CTGGAG 1 cut(s) 527
Bsa29I ATCGAT 1 cut(s) 453
BsaBI GATNNNNATC 1 cut(s) 459
BsaJI CCNNGG 1 cut(s) 75
BsaWI WCCGGW 1 cut(s) 427
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 324
Bse8I GATNNNNATC 1 cut(s) 459
BseBI CCWGG 2 cut(s) 35, 545
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 1 cut(s) 75
BseGI GGATG 3 cut(s) 304, 314, 453
BseJI GATNNNNATC 1 cut(s) 459
BseLI CCNNNNNNNGG 2 cut(s) 19, 324
BseMII CTCAG 1 cut(s) 81
BseRI GAGGAG 1 cut(s) 35
BseSI GKGCMC 1 cut(s) 60
BseX3I CGGCCG 1 cut(s) 105
BsgI GTGCAG 1 cut(s) 497
Bsh1285I CGRYCG 1 cut(s) 108
BshFI GGCC 4 cut(s) 42, 58, 107, 253
BshVI ATCGAT 1 cut(s) 453
BsiEI CGRYCG 1 cut(s) 108
BsiSI CCGG 1 cut(s) 428
BslI CCNNNNNNNGG 2 cut(s) 19, 324
BsnI GGCC 4 cut(s) 42, 58, 107, 253
Bsp120I GGGCCC 1 cut(s) 56
Bsp1286I GDGCHC 1 cut(s) 60
Bsp143I GATC 5 cut(s) 258, 380, 415, 450, 496
Bsp19I CCATGG 1 cut(s) 75
BspACI CCGC 4 cut(s) 104, 120, 464, 521
BspANI GGCC 4 cut(s) 42, 58, 107, 253
BspCNI CTCAG 1 cut(s) 82
BspDI ATCGAT 1 cut(s) 453
BspHI TCATGA 1 cut(s) 346
BspLI GGNNCC 2 cut(s) 58, 220
BspMI ACCTGC 2 cut(s) 469, 545
BspPI GGATC 1 cut(s) 388
BssECI CCNNGG 1 cut(s) 75
BssMI GATC 5 cut(s) 258, 380, 415, 450, 496
BssT1I CCWWGG 1 cut(s) 75
Bst2UI CCWGG 2 cut(s) 35, 545
BstDEI CTNAG 2 cut(s) 90, 255
BstDSI CCRYGG 1 cut(s) 75
BstENI CCTNNNNNAGG 1 cut(s) 322
BstF5I GGATG 3 cut(s) 304, 314, 453
BstKTI GATC 5 cut(s) 261, 383, 418, 453, 499
BstMBI GATC 5 cut(s) 258, 380, 415, 450, 496
BstMCI CGRYCG 1 cut(s) 108
BstMWI GCNNNNNNNGC 1 cut(s) 113
BstNI CCWGG 2 cut(s) 35, 545
BstSCI CCNGG 2 cut(s) 33, 543
BstSLI GKGCMC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 415
BstYI RGATCY 1 cut(s) 415
BstZI CGGCCG 1 cut(s) 105
Bsu15I ATCGAT 1 cut(s) 453
BsuRI GGCC 4 cut(s) 42, 58, 107, 253
BsuTUI ATCGAT 1 cut(s) 453
BtgI CCRYGG 1 cut(s) 75
BtsCI GGATG 3 cut(s) 304, 314, 453
BveI ACCTGC 2 cut(s) 469, 545
CciI TCATGA 1 cut(s) 346
Cfr13I GGNCC 4 cut(s) 56, 57, 218, 251
ClaI ATCGAT 1 cut(s) 453
Csp6I GTAC 2 cut(s) 277, 338
CviAII CATG 5 cut(s) 76, 127, 262, 347, 502
CviJI RGCY 6 cut(s) 42, 48, 58, 107, 253, 283
CviKI_1 RGCY 6 cut(s) 42, 48, 58, 107, 253, 283
CviQI GTAC 2 cut(s) 277, 338
DdeI CTNAG 2 cut(s) 90, 255
DpnI GATC 5 cut(s) 260, 382, 417, 452, 498
DpnII GATC 5 cut(s) 258, 380, 415, 450, 496
EaeI YGGCCR 1 cut(s) 105
EagI CGGCCG 1 cut(s) 105
EciI GGCGGA 1 cut(s) 453
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 1 cut(s) 75
Eco24I GRGCYC 1 cut(s) 60
Eco47I GGWCC 1 cut(s) 218
Eco52I CGGCCG 1 cut(s) 105
EcoNI CCTNNNNNAGG 1 cut(s) 322
EcoRII CCWGG 2 cut(s) 33, 543
EcoT14I CCWWGG 1 cut(s) 75
EcoT38I GRGCYC 1 cut(s) 60
ErhI CCWWGG 1 cut(s) 75
FaeI CATG 5 cut(s) 79, 130, 265, 350, 505
FatI CATG 5 cut(s) 75, 126, 261, 346, 501
FbaI TGATCA 1 cut(s) 496
Fnu4HI GCNGC 1 cut(s) 105
FokI GGATG 3 cut(s) 301, 311, 460
FriOI GRGCYC 1 cut(s) 60
Fsp4HI GCNGC 1 cut(s) 105
FspBI CTAG 3 cut(s) 132, 308, 571
GluI GCNGC 1 cut(s) 105
GsuI CTGGAG 1 cut(s) 527
HaeIII GGCC 4 cut(s) 42, 58, 107, 253
HapII CCGG 1 cut(s) 428
Hin1II CATG 5 cut(s) 79, 130, 265, 350, 505
HinfI GANTC 2 cut(s) 7, 343
HpaII CCGG 1 cut(s) 428
HphI GGTGA 4 cut(s) 191, 355, 493, 526
Hpy166II GTNNAC 1 cut(s) 534
Hpy188III TCNNGA 2 cut(s) 89, 347
Hpy8I GTNNAC 1 cut(s) 534
HpyCH4V TGCA 1 cut(s) 478
HpyF10VI GCNNNNNNNGC 1 cut(s) 113
HpyF3I CTNAG 2 cut(s) 90, 255
Hsp92II CATG 5 cut(s) 79, 130, 265, 350, 505
Ksp22I TGATCA 1 cut(s) 496
Kzo9I GATC 5 cut(s) 258, 380, 415, 450, 496
MaeI CTAG 3 cut(s) 132, 308, 571
MaeIII GTNAC 2 cut(s) 146, 267
MalI GATC 5 cut(s) 260, 382, 417, 452, 498
MboI GATC 5 cut(s) 258, 380, 415, 450, 496
MboII GAAGA 1 cut(s) 178
MflI RGATCY 1 cut(s) 415
MhlI GDGCHC 1 cut(s) 60
MluCI AATT 1 cut(s) 243
MmeI TCCRAC 1 cut(s) 257
MnlI CCTC 7 cut(s) 13, 162, 240, 289, 318, 435, 551
MslI CAYNNNNRTG 2 cut(s) 80, 506
MspI CCGG 1 cut(s) 428
MspR9I CCNGG 2 cut(s) 35, 545
MvaI CCWGG 2 cut(s) 35, 545
MwoI GCNNNNNNNGC 1 cut(s) 113
NcoI CCATGG 1 cut(s) 75
NdeII GATC 5 cut(s) 258, 380, 415, 450, 496
NlaIII CATG 5 cut(s) 79, 130, 265, 350, 505
NlaIV GGNNCC 2 cut(s) 58, 220
PagI TCATGA 1 cut(s) 346
PaqCI CACCTGC 2 cut(s) 469, 545
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PfeI GAWTC 1 cut(s) 343
PkrI GCNGC 1 cut(s) 106
PsiI TTATAA 1 cut(s) 422
Psp6I CCWGG 2 cut(s) 33, 543
PspGI CCWGG 2 cut(s) 33, 543
PspN4I GGNNCC 2 cut(s) 58, 220
PspOMI GGGCCC 1 cut(s) 56
PspPI GGNCC 4 cut(s) 56, 57, 218, 251
PsuI RGATCY 1 cut(s) 415
RsaI GTAC 2 cut(s) 278, 339
RsaNI GTAC 2 cut(s) 277, 338
RseI CAYNNNNRTG 2 cut(s) 80, 506
SatI GCNGC 1 cut(s) 105
Sau3AI GATC 5 cut(s) 258, 380, 415, 450, 496
Sau96I GGNCC 4 cut(s) 56, 57, 218, 251
ScrFI CCNGG 2 cut(s) 35, 545
SduI GDGCHC 1 cut(s) 60
SetI ASST 6 cut(s) 50, 285, 329, 446, 483, 539
SinI GGWCC 1 cut(s) 218
SmiMI CAYNNNNRTG 2 cut(s) 80, 506
SpeI ACTAGT 1 cut(s) 307
Sse9I AATT 1 cut(s) 243
SsiI CCGC 4 cut(s) 104, 120, 464, 521
SspI AATATT 1 cut(s) 99
SspMI CTAG 3 cut(s) 132, 308, 571
StyD4I CCNGG 2 cut(s) 33, 543
StyI CCWWGG 1 cut(s) 75
TaqI TCGA 1 cut(s) 453
TasI AATT 1 cut(s) 243
TatI WGTACW 1 cut(s) 337
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 1 cut(s) 343
TspDTI ATGAA 5 cut(s) 115, 335, 366, 471, 486
TspGWI ACGGA 1 cut(s) 231
VpaK11BI GGWCC 1 cut(s) 218
XagI CCTNNNNNAGG 1 cut(s) 322
XcmI CCANNNNNNNNNTGG 1 cut(s) 50
XspI CTAG 3 cut(s) 132, 308, 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.