Prupe.7G141500_v2.0.a1

salicylic acid-binding protein 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000171
Physical Location & Seq
Reverse (-)
15687547 .. 15689911
2365 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G141500.1

Sequence Viewer

Length: 786 bp
ATGTGTTCCCGATCTCCAAACCCAGAAGCCCAAAAGAAGCATTTTGTGCTGGTTCATGGAGCTGGCCATGGGGCATGGTGTTGGTACAAGCTGTCAGCTCTGCTCATCTCTGCAGGTCACCATGTTACAGCTCTAGACCTAGCAGCATCCGGAGACAACCCAAAACAGATAAATCAAGTCCACTGCTTCGCGGACTATGTTGAGCCTTTGATTGAATTCATGGAGTCTCTCCCACCAGAGGATAGGTTTATCTTGGTGGGCCATAGCATGGGGGGGGCCTCCATATCTATTGCCATGGAGAGGTTCCCTGAGAAAATTTCTGTTGCTGTATTTGCCACCGCTGTGATGCCGGGCCCTACTTTGAGTTACTTGACCACAGTTAAAGAGGTTGGTAGTAGATTGGAAATAAAGGATTCTGAATATAGATATGATAAAGGACCCAACAACCCTCCAACATCGGCAATTTTTGGTCCCCAACGTATGACTTCAGTGTTGTACCAGCTCTCGCCCCCAGAGGACTTGGCACTGGCGTTGTCATCGCTGAGATATTTTCCTCTCTTTGACGAGGAAATAAAACTCACCAAGGAGAAATATGGGTTGGTTCGTAGAGTATATATCGTGTGCGACCAAGACCTTACCATAGGGGAGGATGTGCAACGGTGGATGATCAAGGAAAATCCTCCACATGAAGTCAAAGTGATCAATGGTTCTGATCATATGCCCATGTTCTCCAAACCGCAGGAATTCTTCTCCATCCTCCAAGAGATTTCTGAAAAATATTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

262

Amino Acids

29.32

Weight (kDa)

5.72

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 104
AccB7I CCANNNNNTGG 1 cut(s) 268
AccII CGCG 1 cut(s) 191
AccIII TCCGGA 1 cut(s) 149
AciI CCGC 3 cut(s) 191, 339, 737
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 3 cut(s) 215, 315, 743
AcuI CTGAAG 1 cut(s) 471
AfaI GTAC 2 cut(s) 86, 497
AfiI CCNNNNNNNGG 3 cut(s) 238, 268, 300
AgsI TTSAA 1 cut(s) 215
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AleI CACNNNNGTG 1 cut(s) 341
AluBI AGCT 5 cut(s) 62, 91, 98, 131, 502
AluI AGCT 5 cut(s) 62, 91, 98, 131, 502
Alw26I GTCTC 2 cut(s) 147, 231
Aor13HI TCCGGA 1 cut(s) 149
AoxI GGCC 4 cut(s) 64, 259, 276, 352
ApaI GGGCCC 1 cut(s) 356
ApeKI GCWGC 1 cut(s) 143
ApoI RAATTY 3 cut(s) 215, 315, 743
AspS9I GGNCC 6 cut(s) 259, 276, 352, 353, 437, 470
AsuC2I CCSGG 1 cut(s) 351
AsuHPI GGTGA 2 cut(s) 110, 571
AvaII GGWCC 2 cut(s) 437, 470
BaeGI GKGCMC 1 cut(s) 356
BalI TGGCCA 1 cut(s) 66
BanII GRGCYC 1 cut(s) 356
BbvI GCAGC 1 cut(s) 155
BccI CCATC 1 cut(s) 761
BclI TGATCA 3 cut(s) 666, 699, 712
BcnI CCSGG 1 cut(s) 351
BcoDI GTCTC 2 cut(s) 147, 231
BfaI CTAG 2 cut(s) 134, 140
BfmI CTRYAG 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 104
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
Bme1390I CCNGG 1 cut(s) 351
Bme18I GGWCC 2 cut(s) 437, 470
BmgT120I GGNCC 6 cut(s) 259, 276, 352, 353, 437, 470
BmiI GGNNCC 5 cut(s) 277, 305, 354, 439, 472
BmrFI CCNGG 1 cut(s) 351
BmsI GCATC 2 cut(s) 155, 336
BpuMI CCSGG 1 cut(s) 351
BsaJI CCNNGG 3 cut(s) 67, 294, 582
BsaWI WCCGGW 1 cut(s) 149
Bsc4I CCNNNNNNNGG 3 cut(s) 238, 268, 300
Bse1I ACTGG 1 cut(s) 531
BseAI TCCGGA 1 cut(s) 149
BseDI CCNNGG 3 cut(s) 67, 294, 582
BseGI GGATG 4 cut(s) 146, 655, 669, 753
BseLI CCNNNNNNNGG 3 cut(s) 238, 268, 300
BseMII CTCAG 2 cut(s) 300, 533
BseNI ACTGG 1 cut(s) 531
BseSI GKGCMC 1 cut(s) 356
BseXI GCAGC 1 cut(s) 155
Bsh1236I CGCG 1 cut(s) 191
BshFI GGCC 4 cut(s) 66, 261, 278, 354
BsiSI CCGG 2 cut(s) 150, 350
BslFI GGGAC 1 cut(s) 456
BslI CCNNNNNNNGG 3 cut(s) 238, 268, 300
BsmAI GTCTC 2 cut(s) 147, 231
BsmFI GGGAC 1 cut(s) 456
BsnI GGCC 4 cut(s) 66, 261, 278, 354
Bsp120I GGGCCC 1 cut(s) 352
Bsp1286I GDGCHC 1 cut(s) 356
Bsp13I TCCGGA 1 cut(s) 149
Bsp143I GATC 4 cut(s) 11, 666, 699, 712
Bsp19I CCATGG 2 cut(s) 67, 294
BspACI CCGC 3 cut(s) 191, 339, 737
BspANI GGCC 4 cut(s) 66, 261, 278, 354
BspCNI CTCAG 2 cut(s) 301, 534
BspEI TCCGGA 1 cut(s) 149
BspFNI CGCG 1 cut(s) 191
BspLI GGNNCC 5 cut(s) 277, 305, 354, 439, 472
BspMAI CTGCAG 1 cut(s) 115
BspMI ACCTGC 1 cut(s) 104
BsrI ACTGG 1 cut(s) 531
BssECI CCNNGG 3 cut(s) 67, 294, 582
BssMI GATC 4 cut(s) 11, 666, 699, 712
BssT1I CCWWGG 3 cut(s) 67, 294, 582
Bst4CI ACNGT 2 cut(s) 379, 660
BstAPI GCANNNNNTGC 1 cut(s) 46
BstC8I GCNNGC 1 cut(s) 64
BstDEI CTNAG 2 cut(s) 309, 542
BstDSI CCRYGG 2 cut(s) 67, 294
BstEII GGTNACC 1 cut(s) 116
BstF5I GGATG 4 cut(s) 146, 655, 669, 753
BstFNI CGCG 1 cut(s) 191
BstKTI GATC 4 cut(s) 14, 669, 702, 715
BstMAI GTCTC 2 cut(s) 147, 231
BstMBI GATC 4 cut(s) 11, 666, 699, 712
BstMWI GCNNNNNNNGC 2 cut(s) 46, 332
BstPI GGTNACC 1 cut(s) 116
BstSCI CCNGG 1 cut(s) 349
BstSFI CTRYAG 1 cut(s) 111
BstSLI GKGCMC 1 cut(s) 356
BstUI CGCG 1 cut(s) 191
BstV1I GCAGC 1 cut(s) 155
BsuRI GGCC 4 cut(s) 66, 261, 278, 354
BtgI CCRYGG 2 cut(s) 67, 294
BtgZI GCGATG 1 cut(s) 522
BtsCI GGATG 4 cut(s) 146, 655, 669, 753
BtsI GCAGTG 1 cut(s) 181
BtsIMutI CAGTG 3 cut(s) 181, 495, 524
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 1 cut(s) 64
Cfr13I GGNCC 6 cut(s) 259, 276, 352, 353, 437, 470
Csp6I GTAC 2 cut(s) 85, 496
CviAII CATG 9 cut(s) 56, 68, 75, 122, 220, 268, 295, 686, 724
CviQI GTAC 2 cut(s) 85, 496
DdeI CTNAG 2 cut(s) 309, 542
DpnI GATC 4 cut(s) 13, 668, 701, 714
DpnII GATC 4 cut(s) 11, 666, 699, 712
EaeI YGGCCR 1 cut(s) 64
Eco130I CCWWGG 3 cut(s) 67, 294, 582
Eco24I GRGCYC 1 cut(s) 356
Eco47I GGWCC 2 cut(s) 437, 470
Eco57I CTGAAG 1 cut(s) 471
Eco91I GGTNACC 1 cut(s) 116
EcoO109I RGGNCCY 3 cut(s) 276, 353, 437
EcoO65I GGTNACC 1 cut(s) 116
EcoRI GAATTC 2 cut(s) 215, 743
EcoT14I CCWWGG 3 cut(s) 67, 294, 582
EcoT38I GRGCYC 1 cut(s) 356
ErhI CCWWGG 3 cut(s) 67, 294, 582
FaeI CATG 9 cut(s) 59, 71, 78, 125, 223, 271, 298, 689, 727
FaqI GGGAC 1 cut(s) 456
FatI CATG 9 cut(s) 55, 67, 74, 121, 219, 267, 294, 685, 723
FauNDI CATATG 1 cut(s) 717
FbaI TGATCA 3 cut(s) 666, 699, 712
Fnu4HI GCNGC 1 cut(s) 144
FokI GGATG 4 cut(s) 133, 662, 676, 740
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 2 cut(s) 134, 140
GluI GCNGC 1 cut(s) 144
HaeIII GGCC 4 cut(s) 66, 261, 278, 354
HapII CCGG 2 cut(s) 150, 350
Hin1II CATG 9 cut(s) 59, 71, 78, 125, 223, 271, 298, 689, 727
HinfI GANTC 2 cut(s) 224, 413
HpaII CCGG 2 cut(s) 150, 350
HphI GGTGA 2 cut(s) 110, 571
Hpy166II GTNNAC 1 cut(s) 181
Hpy188I TCNGA 3 cut(s) 418, 712, 772
Hpy188III TCNNGA 3 cut(s) 9, 134, 150
Hpy8I GTNNAC 1 cut(s) 181
HpyCH4III ACNGT 2 cut(s) 379, 660
HpyCH4IV ACGT 1 cut(s) 478
HpyCH4V TGCA 2 cut(s) 113, 655
HpyF10VI GCNNNNNNNGC 2 cut(s) 46, 332
HpyF3I CTNAG 2 cut(s) 309, 542
HpySE526I ACGT 1 cut(s) 478
Hsp92II CATG 9 cut(s) 59, 71, 78, 125, 223, 271, 298, 689, 727
Kpn2I TCCGGA 1 cut(s) 149
Ksp22I TGATCA 3 cut(s) 666, 699, 712
Kzo9I GATC 4 cut(s) 11, 666, 699, 712
LmnI GCTCC 1 cut(s) 59
Lsp1109I GCAGC 1 cut(s) 155
LweI GCATC 2 cut(s) 155, 336
MaeI CTAG 2 cut(s) 134, 140
MaeII ACGT 1 cut(s) 478
MaeIII GTNAC 3 cut(s) 116, 124, 365
MalI GATC 4 cut(s) 13, 668, 701, 714
MboI GATC 4 cut(s) 11, 666, 699, 712
MboII GAAGA 1 cut(s) 739
MhlI GDGCHC 1 cut(s) 356
MlsI TGGCCA 1 cut(s) 66
MluCI AATT 4 cut(s) 215, 315, 462, 743
MluNI TGGCCA 1 cut(s) 66
MlyI GAGTC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 476
Mox20I TGGCCA 1 cut(s) 66
MroI TCCGGA 1 cut(s) 149
MscI TGGCCA 1 cut(s) 66
MseI TTAA 1 cut(s) 381
MslI CAYNNNNRTG 1 cut(s) 341
Msp20I TGGCCA 1 cut(s) 66
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 2 cut(s) 150, 350
MspR9I CCNGG 1 cut(s) 351
MvnI CGCG 1 cut(s) 191
MwoI GCNNNNNNNGC 2 cut(s) 46, 332
NciI CCSGG 1 cut(s) 351
NcoI CCATGG 2 cut(s) 67, 294
NdeI CATATG 1 cut(s) 717
NdeII GATC 4 cut(s) 11, 666, 699, 712
NlaIII CATG 9 cut(s) 59, 71, 78, 125, 223, 271, 298, 689, 727
NlaIV GGNNCC 5 cut(s) 277, 305, 354, 439, 472
NmuCI GTSAC 1 cut(s) 116
OliI CACNNNNGTG 1 cut(s) 341
PfeI GAWTC 1 cut(s) 413
PflMI CCANNNNNTGG 1 cut(s) 268
PkrI GCNGC 1 cut(s) 145
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
PpuMI RGGWCCY 1 cut(s) 437
Psp5II RGGWCCY 1 cut(s) 437
PspEI GGTNACC 1 cut(s) 116
PspN4I GGNNCC 5 cut(s) 277, 305, 354, 439, 472
PspOMI GGGCCC 1 cut(s) 352
PspPI GGNCC 6 cut(s) 259, 276, 352, 353, 437, 470
PspPPI RGGWCCY 1 cut(s) 437
PstI CTGCAG 1 cut(s) 115
RsaI GTAC 2 cut(s) 86, 497
RsaNI GTAC 2 cut(s) 85, 496
RseI CAYNNNNRTG 1 cut(s) 341
SaqAI TTAA 1 cut(s) 381
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 4 cut(s) 11, 666, 699, 712
Sau96I GGNCC 6 cut(s) 259, 276, 352, 353, 437, 470
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 1 cut(s) 351
SduI GDGCHC 1 cut(s) 356
SfaNI GCATC 2 cut(s) 155, 336
SfcI CTRYAG 1 cut(s) 111
SinI GGWCC 2 cut(s) 437, 470
SmiMI CAYNNNNRTG 1 cut(s) 341
Sse9I AATT 4 cut(s) 215, 315, 462, 743
SsiI CCGC 3 cut(s) 191, 339, 737
SspI AATATT 1 cut(s) 779
SspMI CTAG 2 cut(s) 134, 140
StyD4I CCNGG 1 cut(s) 349
StyI CCWWGG 3 cut(s) 67, 294, 582
TaaI ACNGT 2 cut(s) 379, 660
TaiI ACGT 1 cut(s) 481
TasI AATT 4 cut(s) 215, 315, 462, 743
TfiI GAWTC 1 cut(s) 413
Tru1I TTAA 1 cut(s) 381
Tru9I TTAA 1 cut(s) 381
TscAI CASTG 3 cut(s) 188, 495, 531
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 1 cut(s) 143
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 44, 208, 702
TspRI CASTG 3 cut(s) 188, 495, 531
Van91I CCANNNNNTGG 1 cut(s) 268
VpaK11BI GGWCC 2 cut(s) 437, 470
XapI RAATTY 3 cut(s) 215, 315, 743
XbaI TCTAGA 1 cut(s) 133
XspI CTAG 2 cut(s) 134, 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.