MD00G1067600.v1.1

salicylic acid-binding protein 2-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
13044057 .. 13044278
222 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1067600.v1.1.491

Sequence Viewer

Length: 222 bp
ATGGAGTCTCTCCCACCAAAGGAGAGGACTGTTTCAACCAAAAAAAAAGAAAAAAAGGAGAGGATTGTTCTGGTCGGTCATAGCTTCGGCGGGCCTGTCATATCTATTGCCATGAAGACGTTTCCTCGGAAAATTTATGTTGCTGTGTTTGTCACCGCTTTCATGCCTGGCCCTGCTCTTAGTTATTCCAAGGTAGTTAATGAGGTATTTGTAAAATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

8.14

Weight (kDa)

10.14

Isoelectric Point (pI)

26.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000171)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04550 FvH4_1g14860 FvH4_1g14860 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14870 FvH4_1g14880 FvH4_1g14881 FvH4_1g14881 FvH4_1g14891 FvH4_1g14891 FvH4_1g14891 FvH4_1g14900 FvH4_1g14900 FvH4_1g14920 FvH4_1g14930 FvH4_1g14930 FvH4_1g14930 FvH4_1g14940 FvH4_1g15260 FvH4_1g15260
malus_domestica MD00G1067600.v1.1 MD02G1091500.v1.1 MD02G1161800.v1.1 MD02G1161900.v1.1 MD02G1162000.v1.1 MD02G1162200.v1.1 MD02G1162300.v1.1 MD02G1162800.v1.1 MD02G1162900.v1.1 MD02G1163000.v1.1 MD03G1273700.v1.1
prunus_persica Prupe.7G141000_v2.0.a1 Prupe.7G141100_v2.0.a1 Prupe.7G141200_v2.0.a1 Prupe.7G141300_v2.0.a1 Prupe.7G141400_v2.0.a1 Prupe.7G141500_v2.0.a1 Prupe.7G141700_v2.0.a1
pyrus_communis pycom02g12780 pycom02g12790 pycom02g12830 pycom02g12840 pycom02g12870 pycom02g12910 pycom02g12920
rosa_chinensis RchiOBHm_Chr1g0329911 RchiOBHm_Chr1g0329921 RchiOBHm_Chr1g0329951 RchiOBHm_Chr1g0329961 RchiOBHm_Chr2g0103821 RchiOBHm_Chr2g0103831 RchiOBHm_Chr2g0103841 RchiOBHm_Chr2g0103851 RchiOBHm_Chr2g0103861 RchiOBHm_Chr2g0103871 RchiOBHm_Chr2g0103881 RchiOBHm_Chr2g0103951 RchiOBHm_Chr2g0104521
rosa_laevigata RLG00000017266 RLG00000017268 RLG00000017273 RLG00000017333 RLG00000029851 RLG00000029853
rosa_multiflora Rmu_sc0000112.1_g000007 Rmu_sc0000112.1_g000008 Rmu_sc0000112.1_g000021 Rmu_sc0001085.1_g000004 Rmu_sc0001085.1_g000007 Rmu_sc0001085.1_g000008 Rmu_sc0002081.1_g000009 Rmu_sc0002081.1_g000013 Rmu_sc0002316.1_g000050 Rmu_sc0006774.1_g000012 Rmu_sc0009241.1_g000003 Rmu_sc0013732.1_g000001 Rmu_sc0014704.1_g000001 Rmu_sc0030697.1_g000001 Rmu_ssc0000417.1_g000001 Rmu_ssc0000417.1_g000003 Rmu_ssc0000417.1_g000011 Rmu_ssc0000417.1_g000012
rosa_roxburghii Rroxscaffold_2G00138950 Rroxscaffold_2G00139230 Rroxscaffold_2G00139240 Rroxscaffold_2G00139270 Rroxscaffold_2G00139280 Rroxscaffold_2G00139320 Rroxscaffold_2G00139330 Rroxscaffold_4G00320470 Rroxscaffold_4G00320480 Rroxscaffold_4G00320500 Rroxscaffold_4G00320510
rosa_rugosa Rorug01G0084300 Rorug01G0084400.1 Rorug01G0084500 Rorug01G0084600 Rorug01G0084900 Rorug02G0117500 Rorug02G0117800 Rorug02G0117900 Rorug02G0118000 Rorug02G0118100 Rorug02G0118200 Rorug02G0118300
rosa_samantha Rh1AG102200 Rh1AG102300 Rh1AG103000 Rh1AG103300 Rh1BG081400 Rh1BG081500 Rh1BG081600 Rh1BG081700 Rh1CG097200 Rh1CG097300 Rh1CG097700 Rh1CG097800 Rh1CG098100 Rh1CG098400 Rh1DG104800 Rh1DG104900 Rh1DG105600 Rh2AG166600 Rh2AG166700 Rh2AG166800 Rh2AG167100 Rh2AG167300 Rh2AG167400 Rh2AG167500 Rh2AG167600 Rh2BG173700 Rh2BG173800 Rh2BG173900 Rh2BG174000 Rh2BG174300 Rh2BG174400 Rh2BG174500 Rh2BG174700 Rh2CG172500 Rh2CG172600 Rh2CG172800 Rh2CG172900 Rh2CG173000 Rh2CG173100 Rh2CG173200 Rh2CG173300 Rh2CG176000 Rh2DG171900 Rh2DG172000 Rh2DG172100 Rh2DG172300 Rh2DG172700 Rh2DG172800 Rh2DG172900 Rh2DG173000
rosa_wichuraiana Rw0G002040 Rw0G006890 Rw1G008090 Rw1G008100 Rw1G008140 Rw1G008150 Rw1G008200 Rw1G008300 Rw2G013050 Rw2G013060 Rw2G013080 Rw2G013090 Rw2G013100 Rw2G013390 Rw5G012310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 220
AciI CCGC 2 cut(s) 90, 156
AcsI RAATTY 1 cut(s) 132
AfiI CCNNNNNNNGG 1 cut(s) 19
AgsI TTSAA 1 cut(s) 36
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 1 cut(s) 84
AluI AGCT 1 cut(s) 84
Alw26I GTCTC 1 cut(s) 12
AoxI GGCC 2 cut(s) 92, 169
ApoI RAATTY 1 cut(s) 132
AspS9I GGNCC 2 cut(s) 92, 170
AsuHPI GGTGA 1 cut(s) 145
BbsI GAAGAC 1 cut(s) 122
BciT130I CCWGG 1 cut(s) 168
BcoDI GTCTC 1 cut(s) 12
Bme1390I CCNGG 1 cut(s) 168
BmgT120I GGNCC 2 cut(s) 92, 170
BmrFI CCNGG 1 cut(s) 168
BpiI GAAGAC 1 cut(s) 122
BsaJI CCNNGG 2 cut(s) 125, 189
Bsc4I CCNNNNNNNGG 1 cut(s) 19
BseBI CCWGG 1 cut(s) 168
BseDI CCNNGG 2 cut(s) 125, 189
BseLI CCNNNNNNNGG 1 cut(s) 19
BshFI GGCC 2 cut(s) 94, 171
BslI CCNNNNNNNGG 1 cut(s) 19
BsmAI GTCTC 1 cut(s) 12
BsnI GGCC 2 cut(s) 94, 171
BspACI CCGC 2 cut(s) 90, 156
BspANI GGCC 2 cut(s) 94, 171
BssECI CCNNGG 2 cut(s) 125, 189
BssT1I CCWWGG 1 cut(s) 189
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 92
BstDEI CTNAG 1 cut(s) 179
BstMAI GTCTC 1 cut(s) 12
BstNI CCWGG 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 166
BstV2I GAAGAC 1 cut(s) 122
BsuRI GGCC 2 cut(s) 94, 171
Cac8I GCNNGC 1 cut(s) 92
Cfr13I GGNCC 2 cut(s) 92, 170
CviAII CATG 2 cut(s) 112, 163
CviJI RGCY 3 cut(s) 84, 94, 171
CviKI_1 RGCY 3 cut(s) 84, 94, 171
DdeI CTNAG 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 189
EcoRII CCWGG 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 189
ErhI CCWWGG 1 cut(s) 189
FaeI CATG 2 cut(s) 115, 166
FaiI YATR 6 cut(s) 81, 101, 113, 138, 164, 220
FatI CATG 2 cut(s) 111, 162
FauI CCCGC 1 cut(s) 83
HaeIII GGCC 2 cut(s) 94, 171
Hin1II CATG 2 cut(s) 115, 166
HinfI GANTC 1 cut(s) 5
HphI GGTGA 1 cut(s) 145
Hpy188I TCNGA 1 cut(s) 129
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4IV ACGT 1 cut(s) 119
HpyF3I CTNAG 1 cut(s) 179
HpySE526I ACGT 1 cut(s) 119
Hsp92II CATG 2 cut(s) 115, 166
LpnPI CCDG 5 cut(s) 56, 108, 153, 180, 186
MaeII ACGT 1 cut(s) 119
MaeIII GTNAC 1 cut(s) 151
MboII GAAGA 1 cut(s) 127
MluCI AATT 2 cut(s) 132, 215
MlyI GAGTC 1 cut(s) 14
MnlI CCTC 4 cut(s) 18, 54, 135, 196
MseI TTAA 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 168
MvaI CCWGG 1 cut(s) 168
NlaIII CATG 2 cut(s) 115, 166
NmuCI GTSAC 1 cut(s) 151
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
PsiI TTATAA 1 cut(s) 220
Psp6I CCWGG 1 cut(s) 166
PspGI CCWGG 1 cut(s) 166
PspPI GGNCC 2 cut(s) 92, 170
SaqAI TTAA 1 cut(s) 198
Sau96I GGNCC 2 cut(s) 92, 170
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 168
SetI ASST 4 cut(s) 86, 122, 195, 207
Sse9I AATT 2 cut(s) 132, 215
SsiI CCGC 2 cut(s) 90, 156
StyD4I CCNGG 1 cut(s) 166
StyI CCWWGG 1 cut(s) 189
TaaI ACNGT 1 cut(s) 31
TaiI ACGT 1 cut(s) 122
TaqII GACCGA 1 cut(s) 65
TasI AATT 2 cut(s) 132, 215
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TseFI GTSAC 1 cut(s) 151
Tsp45I GTSAC 1 cut(s) 151
TspDTI ATGAA 2 cut(s) 128, 151
XapI RAATTY 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.