Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000099

Physical Location & Seq

Genomic Coordinates Reverse (-)

1729201 .. 1732990

Gene Structure 3790 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g03231.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2499 bp

ATGAGCTCTACTGAAAAATCTTTGATCACTAAATTCTTCATCTTCCTTCTCATACGCTCTTGCTTTTCTATTGACACTATTACACCAAACCAACCTCTAAGAGATGGCGACATTCTTGTGTCATCCGGAAAAGTCTTTGCACTCGGATTTTTCAGTCCCGGAAATTCTGGCAACCGTTATGTTGGAGTATGGTACTACCAAGTTCCTAACCAAACAGTTGTGTGGGTTGCAAACAGAGATCATCCTGTCGATGACAGATCTGGGTTCCTAGCAGTTCAAGGAGACGGGGGCCTTGTGGTTTATGGGAAAGACCAAAAGGTCCCTCTTTGGTCCTCTAATGTTACTCTCTCCTCTCCAAACAATTCTCTGGCCAAGCTTTTGGATTCTGGAAATCTTGTCTTGCTTGAGAACGGGGTAAGCCAAAATGTGCTTTGGGAAGGCTTTAATTATCCCTCAAATACTTTTCTACCATTTATGAAAGTTGGGGTGAACAGGCAGTCTGGAATAGAGTGGTATTGTACATCTTGGAAGTCTCAAGATGACCCAGGAACCGGGAACTGTTCGTATCGGATTGATCCAAGGGGATTTCCACAGCTGATTTTGTATAAGGATGGAGCTCCGTGGTGGAGGGCTGGAACTTGGACTGGTCAGAGATTCAGTGGCGTACCGGTCTCGTCACCTAATTTCATCTTCAATAGTAATTTTGTGAACAATCAAGACGAGATATCGATCATGTATGATGTTACTAATGCCTCATCAATCTACACTAGGACAGTGCTAGATGAAACAGGAACCATTGCACGGTCCACATGGAATGGTGATGCACAAGAATGGAACGTGTTGTGGTCAGCCCCAGTAGAGCGGTGTGATTACTATGGACGCTGTGGTCCAAATAGTAACTGTGCCCCGGACTATGTAGCTAGCACTGAATGCACATGCCTACCTGGGTTTGTACCCAAGTCGCCGGCCGATTGGTACTTGAGAGATGGATCAGGGGGGTGTATTCGAGAAAAAGGAGTATCCATATGTGGAAATGGGGATGGATTTGTGAAGATTGTACGAGTAAAGATACCAGAATCGTCTACGGCTAGTGTAAACATGAATTTGAGTCTAAAAGCGTGTGAACAAGAGTGCTGGAGAAATTGTTCTTGCACTGCTTACTCGGCTGCAGGTGAGAACAAGGGAGGAATTGGATGTGTGACATGGCATGAAGATCTTATGGACACAAGGACATTTTCAAGTTCTGGCCAAGATTTATATGTTCGAGTTAATGCTACTATCTTGGCTCAGTATGCCAAGTCCAATGGTTCTCCTACCAAAAAGGCAAAGCTGGCCATTTCAATAGTATCTGTCTTACTGTTCTTCTTTGTAGTTTTCCTCGTGTACTGGCTGGTGAAGAGGAAATTGACAGGCAAGAAAAGACCAAATAAATTTGAATCAAGAGTTCCCACAGGGTCAATGTACTTCGAAAAGTCTACCGCGGATCTTGATGATCAGAGTACAATGAACTCATCAGAGTTACCCTTTTTTGACCTACGCATCATATCTGCAGCCACAAACAATTTCTCAGCGTCTAATAAGCTTGGAGCAGGCGGTTTTGGCTCCGTTTATAAGGGTGTGCTTTCTAATGGAAAGGAAATTGCAGTTAAAAGACTGTCTAAGCATTCTGGCCAAGGAATTGAAGAGTTCAAAAATGAAGTCATGCTGATTGCAAAACTACAACATAGGAATCTTGTGAAGATTTTAGGCTGTTGCGTTCAAGATGAAGAGAATATGCTGATCTATGAATATGTGCCGAACAAAAGTTTGGACTACTTCATTTTTAATGAAACCAACAGAGCACTTTTAGATTGGAAGACGCGGTTTGAGATAATCTGTGGGATTGCTAGAGGGATCTTGTATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGACTTAAAGGCCAGCAATGTTCTACTGGATGCTTCCTTGAACCCCAAAATTGCAGATTTCGGTCTGGCTAGAATATTTAGAGGAGATCAGAATGAAGCAAATACGAATCGTGTGGTTGGGACATATGGTTATATGTCGCCAGAGTATGCAATGGAAGGATTGTTTTCAGTGAAGTCAGATGTATATAGTTTCGGCATTTTACTACTAGAGATCATTAGTGGTAGAAAAAACAGTGGTTATTACGATGAATCATATCCCGACTCAAATTTAGTTGGACATGTATGGAGTCTGTGGAGGGAAGACCATGCCTTGGAAATAGTTGATTCAACTCTGGGAGACTCGTTCCAGTTTGATGAAGTTCTGAGATGTATACAAATTGCGCTCTTGTGCGTGCAGGACTTTCCGACCGAGAGACCAACCATGTCAGCAGTTCTAGGAATGTTAAGTAATGACGCAGCTCTTCCTCCGCCGGGTAAACCTGCATTTCTAGTGAAGAAAGCAGGTACCAGTGAAGATAATTCTATCAATAATGTGACATGTACTATTGTAAGAGCTAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

833

Amino Acids

92.42

Weight (kDa)

6.73

Isoelectric Point (pI)

38.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	72 - 177	5.8e-33	D-mannose binding lectin
S_locus_glycop	PF00954	209 - 321	6.1e-30	S-locus glycoprotein domain
PAN_2	PF08276	343 - 409	3.3e-21	PAN-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca	FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica	MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica	Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis	pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis	RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata	RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora	Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa	Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha	Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana	Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1611
AarI	CACCTGC	1 cut(s)	1160
AasI	GACNNNNNNGTC	2 cut(s)	317, 885
Acc36I	ACCTGC	3 cut(s)	1160, 2425, 2429
Acc65I	GGTACC	1 cut(s)	2441
AccB1I	GGYRCC	1 cut(s)	2441
AccB7I	CCANNNNNTGG	1 cut(s)	2248
AccBSI	CCGCTC	1 cut(s)	862
AccI	GTMKAC	3 cut(s)	1082, 1475, 2308
AccII	CGCG	2 cut(s)	1481, 1861
AccIII	TCCGGA	1 cut(s)	125
AciI	CCGC	6 cut(s)	862, 1479, 1481, 1593, 1861, 2405
AclWI	GGATC	4 cut(s)	569, 997, 1491, 1901
AcoI	YGGCCR	5 cut(s)	369, 966, 1246, 1332, 1669
AcsI	RAATTY	5 cut(s)	32, 163, 1102, 1430, 2203
AfiI	CCNNNNNNNGG	4 cut(s)	551, 801, 2248, 2408
AflIII	ACRYGT	3 cut(s)	837, 2215, 2474
AgeI	ACCGGT	1 cut(s)	667
AjnI	CCWGG	2 cut(s)	544, 943
AjuI	GAANNNNNNNTTGG	2 cut(s)	1790, 1822
AloI	GAACNNNNNNTCC	2 cut(s)	1129, 1161
AluBI	AGCT	9 cut(s)	6, 376, 595, 617, 920, 1330, 1582, 2396, 2492
AluI	AGCT	9 cut(s)	6, 376, 595, 617, 920, 1330, 1582, 2396, 2492
Alw21I	GWGCWC	3 cut(s)	8, 619, 1843
Alw26I	GTCTC	6 cut(s)	276, 537, 676, 1932, 2268, 2344
AlwI	GGATC	4 cut(s)	569, 997, 1491, 1901
Aor13HI	TCCGGA	1 cut(s)	125
AoxI	GGCC	7 cut(s)	289, 369, 966, 1246, 1332, 1669, 1947
ApeKI	GCWGC	3 cut(s)	1166, 1550, 2393
ApoI	RAATTY	5 cut(s)	32, 163, 1102, 1430, 2203
ArsI	GACNNNNNNTTYG	2 cut(s)	1683, 1715
AsiGI	ACCGGT	1 cut(s)	667
Asp700I	GAANNNNTTC	1 cut(s)	1144
Asp718I	GGTACC	1 cut(s)	2441
AspLEI	GCGC	1 cut(s)	2320
AspS9I	GGNCC	5 cut(s)	289, 319, 330, 804, 887
AsuC2I	CCSGG	4 cut(s)	159, 553, 908, 2409
AsuHPI	GGTGA	5 cut(s)	499, 669, 830, 1184, 1405
AsuII	TTCGAA	1 cut(s)	1467
AsuNHI	GCTAGC	1 cut(s)	920
AvaII	GGWCC	4 cut(s)	319, 330, 804, 887
BaeGI	GKGCMC	1 cut(s)	907
BalI	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
BanI	GGYRCC	1 cut(s)	2441
BanII	GRGCYC	2 cut(s)	8, 619
BauI	CACGAG	1 cut(s)	1379
BbsI	GAAGAC	2 cut(s)	1862, 2244
Bbv12I	GWGCWC	3 cut(s)	8, 619, 1843
BbvI	GCAGC	3 cut(s)	1153, 1562, 2405
BccI	CCATC	4 cut(s)	98, 605, 980, 1034
BceAI	ACGGC	1 cut(s)	1101
BciT130I	CCWGG	2 cut(s)	546, 945
BciVI	GTATCC	1 cut(s)	1030
BclI	TGATCA	2 cut(s)	24, 1492
BcnI	CCSGG	4 cut(s)	159, 553, 908, 2409
BcoDI	GTCTC	6 cut(s)	276, 537, 676, 1932, 2268, 2344
BfmI	CTRYAG	2 cut(s)	1167, 1548
BfuAI	ACCTGC	3 cut(s)	1160, 2425, 2429
BfuI	GTATCC	1 cut(s)	1030
BglII	AGATCT	2 cut(s)	257, 1213
BisI	GCNGC	3 cut(s)	1167, 1551, 2394
BlsI	GCNGC	3 cut(s)	1168, 1552, 2395
Bme1390I	CCNGG	6 cut(s)	159, 546, 553, 908, 945, 2409
Bme18I	GGWCC	4 cut(s)	319, 330, 804, 887
BmgT120I	GGNCC	5 cut(s)	289, 319, 330, 804, 887
BmiI	GGNNCC	7 cut(s)	266, 290, 321, 550, 793, 1603, 2443
BmrFI	CCNGG	6 cut(s)	159, 546, 553, 908, 945, 2409
BmrI	ACTGGG	1 cut(s)	848
BmsI	GCATC	3 cut(s)	811, 1548, 1957
BmtI	GCTAGC	1 cut(s)	924
BmuI	ACTGGG	1 cut(s)	848
BpiI	GAAGAC	2 cut(s)	1862, 2244
BpmI	CTGGAG	1 cut(s)	1156
Bpu14I	TTCGAA	1 cut(s)	1467
BpuEI	CTTGAG	3 cut(s)	425, 519, 1000
BpuMI	CCSGG	4 cut(s)	159, 553, 908, 2409
Bsa29I	ATCGAT	1 cut(s)	728
BsaBI	GATNNNNATC	1 cut(s)	728
BsaI	GGTCTC	2 cut(s)	676, 2344
BsaJI	CCNNGG	8 cut(s)	544, 578, 620, 906, 944, 1479, 1672, 2247
BsaWI	WCCGGW	2 cut(s)	125, 667
BsaXI	ACNNNNNCTCC	2 cut(s)	1129, 1159
Bsc4I	CCNNNNNNNGG	4 cut(s)	551, 801, 2248, 2408
Bse118I	RCCGGY	2 cut(s)	667, 964
Bse1I	ACTGG	6 cut(s)	649, 854, 1391, 1968, 2284, 2445
Bse3DI	GCAATG	3 cut(s)	795, 1960, 2094
Bse8I	GATNNNNATC	1 cut(s)	728
BseAI	TCCGGA	1 cut(s)	125
BseBI	CCWGG	2 cut(s)	546, 945
BseCI	ATCGAT	1 cut(s)	728
BseDI	CCNNGG	8 cut(s)	544, 578, 620, 906, 944, 1479, 1672, 2247
BseGI	GGATG	7 cut(s)	122, 241, 616, 1045, 1199, 1929, 1972
BseJI	GATNNNNATC	1 cut(s)	728
BseLI	CCNNNNNNNGG	4 cut(s)	551, 801, 2248, 2408
BseMI	GCAATG	3 cut(s)	795, 1960, 2094
BseMII	CTCAG	3 cut(s)	1301, 1581, 2291
BseNI	ACTGG	6 cut(s)	649, 854, 1391, 1968, 2284, 2445
BseRI	GAGGAG	2 cut(s)	340, 2034
BseSI	GKGCMC	1 cut(s)	907
BseX3I	CGGCCG	1 cut(s)	966
BseXI	GCAGC	3 cut(s)	1153, 1562, 2405
BsgI	GTGCAG	1 cut(s)	2351
Bsh1236I	CGCG	2 cut(s)	1481, 1861
Bsh1285I	CGRYCG	2 cut(s)	969, 2346
BshFI	GGCC	7 cut(s)	291, 371, 968, 1248, 1334, 1671, 1949
BshNI	GGYRCC	1 cut(s)	2441
BshTI	ACCGGT	1 cut(s)	667
BshVI	ATCGAT	1 cut(s)	728
BsiEI	CGRYCG	2 cut(s)	969, 2346
BsiHKAI	GWGCWC	3 cut(s)	8, 619, 1843
BsiSI	CCGG	7 cut(s)	126, 159, 552, 668, 908, 965, 2408
BslFI	GGGAC	3 cut(s)	141, 305, 2071
BslI	CCNNNNNNNGG	4 cut(s)	551, 801, 2248, 2408
BsmAI	GTCTC	6 cut(s)	276, 537, 676, 1932, 2268, 2344
BsmBI	CGTCTC	1 cut(s)	276
BsmFI	GGGAC	3 cut(s)	141, 305, 2071
BsmI	GAATGC	2 cut(s)	935, 1663
BsnI	GGCC	7 cut(s)	291, 371, 968, 1248, 1334, 1671, 1949
Bso31I	GGTCTC	2 cut(s)	676, 2344
Bsp119I	TTCGAA	1 cut(s)	1467
Bsp1286I	GDGCHC	4 cut(s)	8, 619, 907, 1843
Bsp13I	TCCGGA	1 cut(s)	125
Bsp1407I	TGTACA	1 cut(s)	518
BspACI	CCGC	6 cut(s)	862, 1479, 1481, 1593, 1861, 2405
BspANI	GGCC	7 cut(s)	291, 371, 968, 1248, 1334, 1671, 1949
BspCNI	CTCAG	3 cut(s)	1300, 1580, 2292
BspDI	ATCGAT	1 cut(s)	728
BspEI	TCCGGA	1 cut(s)	125
BspFNI	CGCG	2 cut(s)	1481, 1861
BspLI	GGNNCC	7 cut(s)	266, 290, 321, 550, 793, 1603, 2443
BspMAI	CTGCAG	2 cut(s)	1171, 1552
BspMI	ACCTGC	3 cut(s)	1160, 2425, 2429
BspOI	GCTAGC	1 cut(s)	924
BspPI	GGATC	4 cut(s)	569, 997, 1491, 1901
BspQI	GCTCTTC	1 cut(s)	2403
BspT104I	TTCGAA	1 cut(s)	1467
BspT107I	GGYRCC	1 cut(s)	2441
BspTNI	GGTCTC	2 cut(s)	676, 2344
BsrBI	CCGCTC	1 cut(s)	862
BsrDI	GCAATG	3 cut(s)	795, 1960, 2094
BsrFI	RCCGGY	2 cut(s)	667, 964
BsrGI	TGTACA	1 cut(s)	518
BsrI	ACTGG	6 cut(s)	649, 854, 1391, 1968, 2284, 2445
BssAI	RCCGGY	2 cut(s)	667, 964
BssECI	CCNNGG	8 cut(s)	544, 578, 620, 906, 944, 1479, 1672, 2247
BssNAI	GTATAC	1 cut(s)	2309
BssSI	CACGAG	1 cut(s)	1379
BssT1I	CCWWGG	3 cut(s)	578, 1672, 2247
Bst1107I	GTATAC	1 cut(s)	2309
Bst2BI	CACGAG	1 cut(s)	1379
Bst2UI	CCWGG	2 cut(s)	546, 945
Bst4CI	ACNGT	9 cut(s)	176, 217, 560, 775, 804, 902, 1359, 1656, 2171
Bst6I	CTCTTC	4 cut(s)	1391, 1677, 1761, 2403
BstAPI	GCANNNNNTGC	1 cut(s)	930
BstAUI	TGTACA	1 cut(s)	518
BstBI	TTCGAA	1 cut(s)	1467
BstC8I	GCNNGC	6 cut(s)	922, 966, 1332, 1591, 1951, 2330
BstDEI	CTNAG	5 cut(s)	98, 1287, 1567, 1659, 2300
BstDSI	CCRYGG	2 cut(s)	620, 1479
BstF5I	GGATG	7 cut(s)	122, 241, 616, 1045, 1199, 1929, 1972
BstFNI	CGCG	2 cut(s)	1481, 1861
BstHHI	GCGC	1 cut(s)	2320
BstMAI	GTCTC	6 cut(s)	276, 537, 676, 1932, 2268, 2344
BstMCI	CGRYCG	2 cut(s)	969, 2346
BstMWI	GCNNNNNNNGC	5 cut(s)	930, 1163, 1292, 1331, 1599
BstNI	CCWGG	2 cut(s)	546, 945
BstNSI	RCATGY	3 cut(s)	939, 2219, 2478
BstSCI	CCNGG	6 cut(s)	157, 544, 551, 906, 943, 2407
BstSFI	CTRYAG	2 cut(s)	1167, 1548
BstSLI	GKGCMC	1 cut(s)	907
BstUI	CGCG	2 cut(s)	1481, 1861
BstV1I	GCAGC	3 cut(s)	1153, 1562, 2405
BstV2I	GAAGAC	2 cut(s)	1862, 2244
BstX2I	RGATCY	4 cut(s)	257, 1213, 1483, 1893
BstXI	CCANNNNNNTGG	1 cut(s)	379
BstYI	RGATCY	4 cut(s)	257, 1213, 1483, 1893
BstZ17I	GTATAC	1 cut(s)	2309
BstZI	CGGCCG	1 cut(s)	966
Bsu15I	ATCGAT	1 cut(s)	728
BsuI	GTATCC	1 cut(s)	1030
BsuRI	GGCC	7 cut(s)	291, 371, 968, 1248, 1334, 1671, 1949
BsuTUI	ATCGAT	1 cut(s)	728
BtgI	CCRYGG	2 cut(s)	620, 1479
BtsCI	GGATG	7 cut(s)	122, 241, 616, 1045, 1199, 1929, 1972
BtsI	GCAGTG	1 cut(s)	1152
BtsIMutI	CAGTG	7 cut(s)	664, 780, 924, 1152, 2112, 2176, 2452
BveI	ACCTGC	3 cut(s)	1160, 2425, 2429
Cac8I	GCNNGC	6 cut(s)	922, 966, 1332, 1591, 1951, 2330
CfoI	GCGC	1 cut(s)	2320
Cfr10I	RCCGGY	2 cut(s)	667, 964
Cfr13I	GGNCC	5 cut(s)	289, 319, 330, 804, 887
Cfr42I	CCGCGG	1 cut(s)	1482
ClaI	ATCGAT	1 cut(s)	728
CseI	GACGC	4 cut(s)	888, 1560, 1867, 2399
CspAI	ACCGGT	1 cut(s)	667
DdeI	CTNAG	5 cut(s)	98, 1287, 1567, 1659, 2300
DrdI	GACNNNNNNGTC	2 cut(s)	317, 885
DseDI	GACNNNNNNGTC	2 cut(s)	317, 885
EaeI	YGGCCR	5 cut(s)	369, 966, 1246, 1332, 1669
EagI	CGGCCG	1 cut(s)	966
Eam1104I	CTCTTC	4 cut(s)	1391, 1677, 1761, 2403
EarI	CTCTTC	4 cut(s)	1391, 1677, 1761, 2403
EciI	GGCGGA	1 cut(s)	2394
Ecl136II	GAGCTC	2 cut(s)	6, 617
EclXI	CGGCCG	1 cut(s)	966
Eco130I	CCWWGG	3 cut(s)	578, 1672, 2247
Eco24I	GRGCYC	2 cut(s)	8, 619
Eco31I	GGTCTC	2 cut(s)	676, 2344
Eco32I	GATATC	1 cut(s)	726
Eco47I	GGWCC	4 cut(s)	319, 330, 804, 887
Eco52I	CGGCCG	1 cut(s)	966
Eco53kI	GAGCTC	2 cut(s)	6, 617
EcoICRI	GAGCTC	2 cut(s)	6, 617
EcoO109I	RGGNCCY	2 cut(s)	289, 319
EcoRII	CCWGG	2 cut(s)	544, 943
EcoRV	GATATC	1 cut(s)	726
EcoT14I	CCWWGG	3 cut(s)	578, 1672, 2247
EcoT38I	GRGCYC	2 cut(s)	8, 619
ErhI	CCWWGG	3 cut(s)	578, 1672, 2247
Esp3I	CGTCTC	1 cut(s)	276
FaqI	GGGAC	3 cut(s)	141, 305, 2071
FauNDI	CATATG	2 cut(s)	1025, 2062
FbaI	TGATCA	2 cut(s)	24, 1492
FblI	GTMKAC	3 cut(s)	1082, 1475, 2308
Fnu4HI	GCNGC	3 cut(s)	1167, 1551, 2394
FokI	GGATG	7 cut(s)	109, 228, 623, 1052, 1206, 1916, 1979
FriOI	GRGCYC	2 cut(s)	8, 619
Fsp4HI	GCNGC	3 cut(s)	1167, 1551, 2394
GlaI	GCGC	1 cut(s)	2319
GluI	GCNGC	3 cut(s)	1167, 1551, 2394
GsuI	CTGGAG	1 cut(s)	1156
HaeIII	GGCC	7 cut(s)	291, 371, 968, 1248, 1334, 1671, 1949
HapII	CCGG	7 cut(s)	126, 159, 552, 668, 908, 965, 2408
HgaI	GACGC	4 cut(s)	888, 1560, 1867, 2399
HhaI	GCGC	1 cut(s)	2320
Hin6I	GCGC	1 cut(s)	2318
HinP1I	GCGC	1 cut(s)	2318
HindIII	AAGCTT	2 cut(s)	374, 1580
HpaII	CCGG	7 cut(s)	126, 159, 552, 668, 908, 965, 2408
HphI	GGTGA	5 cut(s)	499, 669, 830, 1184, 1405
Hpy188I	TCNGA	9 cut(s)	146, 570, 651, 1497, 1516, 2028, 2116, 2301, 2343
HpyAV	CCTTC	3 cut(s)	56, 431, 2087
HpyCH4III	ACNGT	9 cut(s)	176, 217, 560, 775, 804, 902, 1359, 1656, 2171
HpyCH4IV	ACGT	1 cut(s)	837
HpyF10VI	GCNNNNNNNGC	5 cut(s)	930, 1163, 1292, 1331, 1599
HpyF3I	CTNAG	5 cut(s)	98, 1287, 1567, 1659, 2300
HpySE526I	ACGT	1 cut(s)	837
HspAI	GCGC	1 cut(s)	2318
Kpn2I	TCCGGA	1 cut(s)	125
KpnI	GGTACC	1 cut(s)	2445
KroI	GCCGGC	1 cut(s)	964
KroNI	GCCGGC	1 cut(s)	966
Ksp22I	TGATCA	2 cut(s)	24, 1492
KspI	CCGCGG	1 cut(s)	1482
LguI	GCTCTTC	1 cut(s)	2403
LmnI	GCTCC	4 cut(s)	614, 622, 1586, 1607
Lsp1109I	GCAGC	3 cut(s)	1153, 1562, 2405
LweI	GCATC	3 cut(s)	811, 1548, 1957
MaeII	ACGT	1 cut(s)	837
MaeIII	GTNAC	7 cut(s)	340, 675, 742, 896, 1198, 1518, 2470
MbiI	CCGCTC	1 cut(s)	862
MflI	RGATCY	4 cut(s)	257, 1213, 1483, 1893
MhlI	GDGCHC	4 cut(s)	8, 619, 907, 1843
MlsI	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
MluNI	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
MlyI	GAGTC	4 cut(s)	1117, 2192, 2233, 2270
MmeI	TCCRAC	3 cut(s)	163, 2191, 2366
Mox20I	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
MroI	TCCGGA	1 cut(s)	125
MroNI	GCCGGC	1 cut(s)	964
MroXI	GAANNNNTTC	1 cut(s)	1144
MscI	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
MseI	TTAA	7 cut(s)	444, 1269, 1647, 1824, 1922, 1943, 2381
MslI	CAYNNNNRTG	2 cut(s)	116, 829
Msp20I	TGGCCA	4 cut(s)	371, 1248, 1334, 1671
MspA1I	CMGCKG	2 cut(s)	595, 1481
MspI	CCGG	7 cut(s)	126, 159, 552, 668, 908, 965, 2408
MspR9I	CCNGG	6 cut(s)	159, 546, 553, 908, 945, 2409
Mva1269I	GAATGC	2 cut(s)	935, 1663
MvaI	CCWGG	2 cut(s)	546, 945
MvnI	CGCG	2 cut(s)	1481, 1861
MwoI	GCNNNNNNNGC	5 cut(s)	930, 1163, 1292, 1331, 1599
NaeI	GCCGGC	1 cut(s)	966
NciI	CCSGG	4 cut(s)	159, 553, 908, 2409
NdeI	CATATG	2 cut(s)	1025, 2062
NgoMIV	GCCGGC	1 cut(s)	964
NheI	GCTAGC	1 cut(s)	920
NlaIV	GGNNCC	7 cut(s)	266, 290, 321, 550, 793, 1603, 2443
NmeAIII	GCCGAG	1 cut(s)	1142
NmuCI	GTSAC	3 cut(s)	675, 1198, 2470
NspI	RCATGY	3 cut(s)	939, 2219, 2478
NspV	TTCGAA	1 cut(s)	1467
PaqCI	CACCTGC	1 cut(s)	1160
PciI	ACATGT	2 cut(s)	2215, 2474
PciSI	GCTCTTC	1 cut(s)	2403
PctI	GAATGC	2 cut(s)	935, 1663
PdiI	GCCGGC	1 cut(s)	966
PdmI	GAANNNNTTC	1 cut(s)	1144
PflMI	CCANNNNNTGG	1 cut(s)	2248
PfoI	TCCNGGA	1 cut(s)	157
PinAI	ACCGGT	1 cut(s)	667
PkrI	GCNGC	3 cut(s)	1168, 1552, 2395
PleI	GAGTC	4 cut(s)	1116, 2192, 2232, 2270
PpsI	GAGTC	4 cut(s)	1116, 2192, 2232, 2270
PpuMI	RGGWCCY	1 cut(s)	319
PscI	ACATGT	2 cut(s)	2215, 2474
PsiI	TTATAA	1 cut(s)	1611
Psp124BI	GAGCTC	2 cut(s)	8, 619
Psp5II	RGGWCCY	1 cut(s)	319
Psp6I	CCWGG	2 cut(s)	544, 943
PspGI	CCWGG	2 cut(s)	544, 943
PspN4I	GGNNCC	7 cut(s)	266, 290, 321, 550, 793, 1603, 2443
PspPI	GGNCC	5 cut(s)	289, 319, 330, 804, 887
PspPPI	RGGWCCY	1 cut(s)	319
PstI	CTGCAG	2 cut(s)	1171, 1552
PsuI	RGATCY	4 cut(s)	257, 1213, 1483, 1893
PvuII	CAGCTG	1 cut(s)	595
RseI	CAYNNNNRTG	2 cut(s)	116, 829
SacI	GAGCTC	2 cut(s)	8, 619
SacII	CCGCGG	1 cut(s)	1482
SapI	GCTCTTC	1 cut(s)	2403
SaqAI	TTAA	7 cut(s)	444, 1269, 1647, 1824, 1922, 1943, 2381
SatI	GCNGC	3 cut(s)	1167, 1551, 2394
Sau96I	GGNCC	5 cut(s)	289, 319, 330, 804, 887
SchI	GAGTC	4 cut(s)	1117, 2192, 2233, 2270
ScrFI	CCNGG	6 cut(s)	159, 546, 553, 908, 945, 2409
SduI	GDGCHC	4 cut(s)	8, 619, 907, 1843
SfaNI	GCATC	3 cut(s)	811, 1548, 1957
SfcI	CTRYAG	2 cut(s)	1167, 1548
Sfr303I	CCGCGG	1 cut(s)	1482
SfuI	TTCGAA	1 cut(s)	1467
SgrBI	CCGCGG	1 cut(s)	1482
SinI	GGWCC	4 cut(s)	319, 330, 804, 887
SmiMI	CAYNNNNRTG	2 cut(s)	116, 829
SmlI	CTYRAG	3 cut(s)	404, 534, 979
SmoI	CTYRAG	3 cut(s)	404, 534, 979
SsiI	CCGC	6 cut(s)	862, 1479, 1481, 1593, 1861, 2405
SspI	AATATT	1 cut(s)	2013
SstI	GAGCTC	2 cut(s)	8, 619
StyD4I	CCNGG	6 cut(s)	157, 544, 551, 906, 943, 2407
StyI	CCWWGG	3 cut(s)	578, 1672, 2247
TaaI	ACNGT	9 cut(s)	176, 217, 560, 775, 804, 902, 1359, 1656, 2171
TaiI	ACGT	1 cut(s)	840
TaqI	TCGA	5 cut(s)	249, 728, 1006, 1264, 1467
TaqII	GACCGA	2 cut(s)	1988, 2360
TatI	WGTACW	5 cut(s)	518, 1383, 1461, 1499, 2477
Tru1I	TTAA	7 cut(s)	444, 1269, 1647, 1824, 1922, 1943, 2381
Tru9I	TTAA	7 cut(s)	444, 1269, 1647, 1824, 1922, 1943, 2381
TscAI	CASTG	7 cut(s)	664, 780, 931, 1159, 2112, 2176, 2452
TseFI	GTSAC	3 cut(s)	675, 1198, 2470
TseI	GCWGC	3 cut(s)	1166, 1550, 2393
Tsp45I	GTSAC	3 cut(s)	675, 1198, 2470
TspGWI	ACGGA	2 cut(s)	609, 1594
TspRI	CASTG	7 cut(s)	664, 780, 931, 1159, 2112, 2176, 2452
Van91I	CCANNNNNTGG	1 cut(s)	2248
VpaK11BI	GGWCC	4 cut(s)	319, 330, 804, 887
XapI	RAATTY	5 cut(s)	32, 163, 1102, 1430, 2203
XceI	RCATGY	3 cut(s)	939, 2219, 2478
XmiI	GTMKAC	3 cut(s)	1082, 1475, 2308
XmnI	GAANNNNTTC	1 cut(s)	1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.