RchiOBHm_Chr4g0411951

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
35719957 .. 35723517
3561 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38271

Sequence Viewer

Length: 2622 bp
ATGCAATTGTCTCAGCTGCACAAGAACAGAAAGTCAAATAAGGAGAGCCAACCACTCAAGAACAGAACAGTATTCCAAATAAGAAGATCTTGTATGTACGTTAATTTGTTCTTTTATTGGGCAATCTCATTCCTCATAACCAAGAATTTTACTACCATGTGGTTTGACAAAATATTGCTTATCTCGTTTGTTCTTCTTCCCTCTTGCTTTTGCCTTGATACCTTTACTCTAAATCAAGCCATCAAAGACGGTGATGTGTTAGTCTCCGGCAGGGAAATCTTTGCACTTGGATTTTTCAGTGCAGGCAATTCTAGCAACCGTTACGTTGGAGTATGGTATAACCAAATTTCTAACCAAACTGTTGTGTGGGTTGCAAACAGAGATAACCCTGTCCCTGATACCTCTGGAGTGCTATCCATAAATGGAGATGGAGGCCTAGTCATCTATGGAAATAACCGAAGTTTCCCTCTTTGGTCTGCTAATGTCACTCTCTCTTCTCCAAACAATTCAATTGCCAAGCTTCTGGATACAGGAAATCTTGTCTTGCTCGAGAATGAGGATAGTCAAAAGGTTATATGGCAAGGGTTTGATTATCCCACTGATACAATGCTTCCACTTATGAAAATTGGTTTGGACAGGCGGTCTGGGCTGAACAGGTTCTTAACATCTTGGAAATCGAAAGATGACCCAGGAACTGGGAGCTGTTCATGTCGGCTTGACCCTAGTGGATTTCCACAGATGATTTTGTACAAGGATGGAGCTCCATGGTGGCGGGATGAAGTGGCATCTTGGGTTGGCCAGTCATGTTGTACTGTAACAATTTTAGTGAACAATGCAGATGAGGTATCCATTATGTCATCAGCTAAGAACAATCAGTCAAATTTCTCAAGGACTGTGTTAGATGAATCAGGAACATTTCGACGGTTCACGTGGAATGATCGAGCACAAAAATGGACAGAATTATGGTCTGCTCCGATAGAGCGTTGCGATTTTTATGGACAATGTGGTCCAAATGGTAACTGCGATCCCTATGTTACTAATACTATAGATTGCATCTGCCTTCCGGGGTTTGAACCCAAGTCGCCAACTGATTGGTACTCGAGAGATGGGACAGATGGGTGTGTAAAGAAAAAAGGAGTATCTACATGCCGAAATGGGGAAAAATTTGTGAATCTGGAAAGTATGAAAATACCAGACTTGTCTAGGGCACTTGTTAATATGAATATGAGTATGAAAGCGTGCAAGCAAGAATGCTTGAAAAATTGTTCTTGCGTTGCATACAGTAGCAGCGACAAAACTGGATGTGTGACATGGTATGGGGAATTGATGGACACGAGGGTGCAGCCCAGTAATGGTCAAAATTTATATGTACGAGTGGATGCAACCGTCTTTGCTCAATATGCAAAGAAGTCAAATGATTCTCTTAGCAAGAAGGAAAAGCTGGCAATTTCACTAGTATCTGTTTTAGCGCTATTTCTACTAGTTTTCCTTGTCTATTGGTTACTGAGGATGAAGAGAAAAGGTAAAAGAAGACGAGATGAATATTCATTTAGCTTCTTCAACGAATCTACTGGTGGAATGGAACCTGCTGAAAGTAGCATAAGCTCAGATTTGCCATTCTTTGACCTAACAACCATAGCAGCAGCCACAGACAACTTCTCTCTTGCAAACAAGCTTGGAACAGGCGGTTTTGGCTCCGTCTATAAGGGTGTACTTTTTAATGGAAAGGAAATAGCAGTGAAAAGATTATCGAAGACCTCGGGTCAAGGAATTGAAGAGTTTAAAAATGAGGTTTTGTTGATTGCGAAACTCCAACATCGCAACCTTGTGAGGATATTAGGTTGTTGCGTTCAAGATGAAGAGAAGATGCTAATCTATGAGTACTTACCAAACAAAGGCCTCGACTTTTTTATTTTTAACGAAACCAACAAAGCACTTTTAGATTGGACAAAACGCTTTGAGATTATCCATGGAATCACTAGAGGAATTATATATCTTCACCAAGATTCAAGATTAAGAATTATCCACCGAGATCTAAAGGCCAGCAATGTTCTACTAGATGCTTCTATGAACCCCAAAATTGCAGATTTTGGTATGGCTAGAATTTTTAAGGGAGATCAAAATGAAGCAAATACAAAGCGTGTGGTTGGAACATATGGTTATATGTCACCAGAGTATGCAATGCAAGGAAGGTTTTCGGTGAAGTCAGATGTATATAGCTATGGCGTTTTACTAATAGAAATCATTACCGGAAGAAAGAATAATGGCTTTTACCATGAGGAACATCCTTACTCAAATTTAGTTGGGCATGTTTGGAACTTGTGGAGTGAAGGTAAGGTCTTGCAAATAGTTGATTCGTCCATTGGTGAATCATACCCCGTCAATGAAGTTCTGAAATGTATTCAGATTGCCTTCTTGTGCCTGCAAGAGTATCCAGCTGACCGGCCAACCATGTCTGAAGTTCTTTTCATGCTAGGTAACGATGCGGACGCTCTTCCTTCACCACGAAAACTTGCATTCTTATTGGAGAGAAGCAGCAGTTCTATGGGTGGCAAGTTGTCAACCCATGAAGGATATCATTCTCTAAATAATTTCACATGTAGTGTGGTAGAAGCTAGGTAG

Protein Analysis

873

Amino Acids

98.41

Weight (kDa)

8.48

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 120 - 225 7.8e-36 D-mannose binding lectin
S_locus_glycop PF00954 276 - 361 1.2e-19 S-locus glycoprotein domain
PAN_2 PF08276 383 - 445 8.6e-18 PAN-like domain
PK_Tyr_Ser-Thr PF07714 555 - 822 5e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 555 - 822 3.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1005
Acc36I ACCTGC 1 cut(s) 1594
AccB7I CCANNNNNTGG 1 cut(s) 695
AciI CCGC 4 cut(s) 640, 772, 1686, 2486
AclWI GGATC 1 cut(s) 1019
AcoI YGGCCR 2 cut(s) 796, 2444
AcsI RAATTY 7 cut(s) 145, 345, 880, 1163, 1360, 2103, 2296
AcuI CTGAAG 1 cut(s) 2478
AcvI CACGTG 1 cut(s) 930
AfaI GTAC 7 cut(s) 98, 749, 811, 1097, 1371, 1713, 1883
AfeI AGCGCT 1 cut(s) 1470
AfiI CCNNNNNNNGG 4 cut(s) 695, 1156, 1352, 1895
AflIII ACRYGT 1 cut(s) 2597
AgsI TTSAA 7 cut(s) 510, 1073, 1258, 1561, 1775, 1853, 2010
AhdI GACNNNNNGTC 2 cut(s) 640, 1761
AhlI ACTAGT 2 cut(s) 1453, 1480
AjnI CCWGG 1 cut(s) 688
AjuI GAANNNNNNNTTGG 2 cut(s) 614, 646
AleI CACNNNNGTG 1 cut(s) 1337
Alw21I GWGCWC 2 cut(s) 763, 946
Alw26I GTCTC 2 cut(s) 15, 268
AlwI GGATC 1 cut(s) 1019
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 3 cut(s) 548, 1099, 1759
Aor51HI AGCGCT 1 cut(s) 1470
AoxI GGCC 5 cut(s) 433, 796, 1897, 2040, 2444
ApeKI GCWGC 6 cut(s) 16, 1287, 1342, 1640, 1643, 2535
ApoI RAATTY 7 cut(s) 145, 345, 880, 1163, 1360, 2103, 2296
Asp700I GAANNNNTTC 2 cut(s) 656, 2194
AspLEI GCGC 1 cut(s) 1471
AspS9I GGNCC 1 cut(s) 1007
AsuC2I CCSGG 1 cut(s) 1065
AsuHPI GGTGA 6 cut(s) 263, 1991, 2160, 2212, 2378, 2493
AvaI CYCGRG 3 cut(s) 548, 1099, 1759
AvaII GGWCC 1 cut(s) 1007
BaeGI GKGCMC 1 cut(s) 1210
BalI TGGCCA 1 cut(s) 798
BanII GRGCYC 1 cut(s) 763
BauI CACGAG 1 cut(s) 1333
BbrPI CACGTG 1 cut(s) 930
BbsI GAAGAC 2 cut(s) 1537, 1760
Bbv12I GWGCWC 2 cut(s) 763, 946
BbvI GCAGC 6 cut(s) 3, 1299, 1354, 1652, 1655, 2547
BccI CCATC 6 cut(s) 248, 422, 749, 1100, 1109, 1321
BciT130I CCWGG 1 cut(s) 690
BciVI GTATCC 3 cut(s) 520, 856, 2442
BcnI CCSGG 1 cut(s) 1065
BcoDI GTCTC 2 cut(s) 15, 268
BcuI ACTAGT 2 cut(s) 1453, 1480
BfmI CTRYAG 1 cut(s) 1044
BfoI RGCGCY 1 cut(s) 1472
BfuAI ACCTGC 1 cut(s) 1594
BfuI GTATCC 3 cut(s) 520, 856, 2442
BglII AGATCT 2 cut(s) 86, 2032
BisI GCNGC 6 cut(s) 17, 1288, 1343, 1641, 1644, 2536
BlsI GCNGC 6 cut(s) 18, 1289, 1344, 1642, 1645, 2537
BmcAI AGTACT 1 cut(s) 1883
Bme1390I CCNGG 2 cut(s) 690, 1065
Bme18I GGWCC 1 cut(s) 1007
BmeRI GACNNNNNGTC 2 cut(s) 640, 1761
BmeT110I CYCGRG 3 cut(s) 548, 1099, 1759
BmgT120I GGNCC 1 cut(s) 1007
BmiI GGNNCC 2 cut(s) 1584, 1696
BmrFI CCNGG 2 cut(s) 690, 1065
BmrI ACTGGG 2 cut(s) 705, 1341
BmsI GCATC 6 cut(s) 794, 1062, 1369, 1857, 2050, 2473
BmuI ACTGGG 2 cut(s) 705, 1341
BpiI GAAGAC 2 cut(s) 1537, 1760
BpmI CTGGAG 1 cut(s) 426
BpuEI CTTGAG 2 cut(s) 41, 871
BpuMI CCSGG 1 cut(s) 1065
BsaAI YACGTR 1 cut(s) 930
BsaBI GATNNNNATC 1 cut(s) 1871
BsaJI CCNNGG 5 cut(s) 688, 764, 1064, 1758, 1969
BsaWI WCCGGW 1 cut(s) 2249
BsaXI ACNNNNNCTCC 4 cut(s) 423, 453, 2317, 2347
Bsc4I CCNNNNNNNGG 4 cut(s) 695, 1156, 1352, 1895
Bse118I RCCGGY 1 cut(s) 2442
Bse1I ACTGG 5 cut(s) 700, 799, 1303, 1347, 1576
Bse3DI GCAATG 2 cut(s) 2053, 2187
Bse8I GATNNNNATC 1 cut(s) 1871
BseBI CCWGG 1 cut(s) 690
BseDI CCNNGG 5 cut(s) 688, 764, 1064, 1758, 1969
BseGI GGATG 6 cut(s) 760, 781, 1307, 1384, 1515, 2284
BseJI GATNNNNATC 1 cut(s) 1871
BseLI CCNNNNNNNGG 4 cut(s) 695, 1156, 1352, 1895
BseMI GCAATG 2 cut(s) 2053, 2187
BseMII CTCAG 3 cut(s) 26, 1496, 1620
BseNI ACTGG 5 cut(s) 700, 799, 1303, 1347, 1576
BseSI GKGCMC 1 cut(s) 1210
BseXI GCAGC 6 cut(s) 3, 1299, 1354, 1652, 1655, 2547
BsgI GTGCAG 2 cut(s) 321, 1361
BshFI GGCC 5 cut(s) 435, 798, 1899, 2042, 2446
BsiHKAI GWGCWC 2 cut(s) 763, 946
BsiHKCI CYCGRG 3 cut(s) 548, 1099, 1759
BsiSI CCGG 4 cut(s) 267, 1064, 2250, 2443
BslFI GGGAC 2 cut(s) 377, 1123
BslI CCNNNNNNNGG 4 cut(s) 695, 1156, 1352, 1895
BsmAI GTCTC 2 cut(s) 15, 268
BsmFI GGGAC 2 cut(s) 377, 1123
BsmI GAATGC 2 cut(s) 1256, 2516
BsnI GGCC 5 cut(s) 435, 798, 1899, 2042, 2446
BsoBI CYCGRG 3 cut(s) 548, 1099, 1759
Bsp1286I GDGCHC 3 cut(s) 763, 946, 1210
Bsp1407I TGTACA 1 cut(s) 747
Bsp143I GATC 5 cut(s) 86, 937, 1024, 2032, 2116
Bsp19I CCATGG 2 cut(s) 764, 1969
BspACI CCGC 4 cut(s) 640, 772, 1686, 2486
BspANI GGCC 5 cut(s) 435, 798, 1899, 2042, 2446
BspCNI CTCAG 3 cut(s) 25, 1497, 1619
BspLI GGNNCC 2 cut(s) 1584, 1696
BspMI ACCTGC 1 cut(s) 1594
BspPI GGATC 1 cut(s) 1019
BspQI GCTCTTC 1 cut(s) 2499
BsrDI GCAATG 2 cut(s) 2053, 2187
BsrFI RCCGGY 1 cut(s) 2442
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 5 cut(s) 700, 799, 1303, 1347, 1576
BssAI RCCGGY 1 cut(s) 2442
BssECI CCNNGG 5 cut(s) 688, 764, 1064, 1758, 1969
BssMI GATC 5 cut(s) 86, 937, 1024, 2032, 2116
BssSI CACGAG 1 cut(s) 1333
BssT1I CCWWGG 2 cut(s) 764, 1969
Bst2BI CACGAG 1 cut(s) 1333
Bst2UI CCWGG 1 cut(s) 690
Bst4CI ACNGT 9 cut(s) 70, 251, 320, 361, 814, 895, 924, 1283, 1387
Bst6I CTCTTC 5 cut(s) 499, 1508, 1770, 1854, 2499
BstAUI TGTACA 1 cut(s) 747
BstBAI YACGTR 1 cut(s) 930
BstC8I GCNNGC 6 cut(s) 304, 1240, 1244, 1443, 2044, 2423
BstDEI CTNAG 5 cut(s) 12, 864, 1424, 1505, 1606
BstDSI CCRYGG 2 cut(s) 764, 1969
BstF5I GGATG 6 cut(s) 760, 781, 1307, 1384, 1515, 2284
BstH2I RGCGCY 1 cut(s) 1472
BstHHI GCGC 1 cut(s) 1471
BstKTI GATC 5 cut(s) 89, 940, 1027, 2035, 2119
BstMAI GTCTC 2 cut(s) 15, 268
BstMBI GATC 5 cut(s) 86, 937, 1024, 2032, 2116
BstMWI GCNNNNNNNGC 4 cut(s) 312, 646, 1400, 1692
BstNI CCWGG 1 cut(s) 690
BstNSI RCATGY 3 cut(s) 1149, 2312, 2601
BstSCI CCNGG 2 cut(s) 688, 1063
BstSFI CTRYAG 1 cut(s) 1044
BstSLI GKGCMC 1 cut(s) 1210
BstV1I GCAGC 6 cut(s) 3, 1299, 1354, 1652, 1655, 2547
BstV2I GAAGAC 2 cut(s) 1537, 1760
BstX2I RGATCY 2 cut(s) 86, 2032
BstXI CCANNNNNNTGG 2 cut(s) 523, 1092
BstYI RGATCY 2 cut(s) 86, 2032
BsuI GTATCC 3 cut(s) 520, 856, 2442
BsuRI GGCC 5 cut(s) 435, 798, 1899, 2042, 2446
BtgI CCRYGG 2 cut(s) 764, 1969
BtgZI GCGATG 1 cut(s) 1802
BtsCI GGATG 6 cut(s) 760, 781, 1307, 1384, 1515, 2284
BtsI GCAGTG 1 cut(s) 1743
BtsIMutI CAGTG 3 cut(s) 304, 597, 1743
BveI ACCTGC 1 cut(s) 1594
Cac8I GCNNGC 6 cut(s) 304, 1240, 1244, 1443, 2044, 2423
CaiI CAGNNNCTG 1 cut(s) 695
CfoI GCGC 1 cut(s) 1471
Cfr10I RCCGGY 1 cut(s) 2442
Cfr13I GGNCC 1 cut(s) 1007
CseI GACGC 1 cut(s) 2498
Csp6I GTAC 7 cut(s) 97, 748, 810, 1096, 1370, 1712, 1882
CspCI CAANNNNNGTGG 2 cut(s) 2124, 2159
CviQI GTAC 7 cut(s) 97, 748, 810, 1096, 1370, 1712, 1882
DdeI CTNAG 5 cut(s) 12, 864, 1424, 1505, 1606
DpnI GATC 5 cut(s) 88, 939, 1026, 2034, 2118
DpnII GATC 5 cut(s) 86, 937, 1024, 2032, 2116
DraI TTTAAA 1 cut(s) 1783
DrdI GACNNNNNNGTC 1 cut(s) 1005
DriI GACNNNNNGTC 2 cut(s) 640, 1761
DseDI GACNNNNNNGTC 1 cut(s) 1005
EaeI YGGCCR 2 cut(s) 796, 2444
Eam1104I CTCTTC 5 cut(s) 499, 1508, 1770, 1854, 2499
Eam1105I GACNNNNNGTC 2 cut(s) 640, 1761
EarI CTCTTC 5 cut(s) 499, 1508, 1770, 1854, 2499
Ecl136II GAGCTC 1 cut(s) 761
Eco130I CCWWGG 2 cut(s) 764, 1969
Eco147I AGGCCT 2 cut(s) 435, 1899
Eco24I GRGCYC 1 cut(s) 763
Eco32I GATATC 1 cut(s) 2576
Eco47I GGWCC 1 cut(s) 1007
Eco47III AGCGCT 1 cut(s) 1470
Eco53kI GAGCTC 1 cut(s) 761
Eco57I CTGAAG 1 cut(s) 2478
Eco72I CACGTG 1 cut(s) 930
Eco88I CYCGRG 3 cut(s) 548, 1099, 1759
EcoICRI GAGCTC 1 cut(s) 761
EcoRII CCWGG 1 cut(s) 688
EcoRV GATATC 1 cut(s) 2576
EcoT14I CCWWGG 2 cut(s) 764, 1969
EcoT38I GRGCYC 1 cut(s) 763
ErhI CCWWGG 2 cut(s) 764, 1969
FalI AAGNNNNNCTT 2 cut(s) 73, 105
FaqI GGGAC 2 cut(s) 377, 1123
FauI CCCGC 1 cut(s) 765
FauNDI CATATG 1 cut(s) 2155
Fnu4HI GCNGC 6 cut(s) 17, 1288, 1343, 1641, 1644, 2536
FokI GGATG 6 cut(s) 767, 788, 1314, 1391, 1522, 2271
FriOI GRGCYC 1 cut(s) 763
Fsp4HI GCNGC 6 cut(s) 17, 1288, 1343, 1641, 1644, 2536
GlaI GCGC 1 cut(s) 1470
GluI GCNGC 6 cut(s) 17, 1288, 1343, 1641, 1644, 2536
GsuI CTGGAG 1 cut(s) 426
HaeII RGCGCY 1 cut(s) 1472
HaeIII GGCC 5 cut(s) 435, 798, 1899, 2042, 2446
HapII CCGG 4 cut(s) 267, 1064, 2250, 2443
HgaI GACGC 1 cut(s) 2498
HhaI GCGC 1 cut(s) 1471
Hin6I GCGC 1 cut(s) 1469
HinP1I GCGC 1 cut(s) 1469
HincII GTYRAC 1 cut(s) 2562
HindII GTYRAC 1 cut(s) 2562
HindIII AAGCTT 2 cut(s) 518, 1673
HinfI GANTC 8 cut(s) 905, 1171, 1418, 1565, 1974, 2006, 2354, 2369
HpaII CCGG 4 cut(s) 267, 1064, 2250, 2443
HphI GGTGA 6 cut(s) 263, 1991, 2160, 2212, 2378, 2493
Hpy166II GTNNAC 4 cut(s) 829, 927, 1712, 2562
Hpy188I TCNGA 6 cut(s) 975, 1609, 2209, 2394, 2406, 2458
Hpy188III TCNNGA 9 cut(s) 58, 405, 524, 550, 909, 1101, 1175, 1853, 2010
Hpy8I GTNNAC 4 cut(s) 829, 927, 1712, 2562
Hpy99I CGWCG 1 cut(s) 924
HpyAV CCTTC 7 cut(s) 1070, 1426, 2184, 2324, 2422, 2508, 2564
HpyCH4III ACNGT 9 cut(s) 70, 251, 320, 361, 814, 895, 924, 1283, 1387
HpyCH4IV ACGT 3 cut(s) 99, 324, 929
HpyF10VI GCNNNNNNNGC 4 cut(s) 312, 646, 1400, 1692
HpyF3I CTNAG 5 cut(s) 12, 864, 1424, 1505, 1606
HpySE526I ACGT 3 cut(s) 99, 324, 929
HspAI GCGC 1 cut(s) 1469
Kzo9I GATC 5 cut(s) 86, 937, 1024, 2032, 2116
LguI GCTCTTC 1 cut(s) 2499
LmnI GCTCC 5 cut(s) 699, 758, 766, 976, 1700
Lsp1109I GCAGC 6 cut(s) 3, 1299, 1354, 1652, 1655, 2547
LweI GCATC 6 cut(s) 794, 1062, 1369, 1857, 2050, 2473
MaeII ACGT 3 cut(s) 99, 324, 929
MaeIII GTNAC 9 cut(s) 320, 484, 814, 1016, 1033, 1306, 1500, 2166, 2477
MalI GATC 5 cut(s) 88, 939, 1026, 2034, 2118
MboI GATC 5 cut(s) 86, 937, 1024, 2032, 2116
MfeI CAATTG 2 cut(s) 5, 510
MflI RGATCY 2 cut(s) 86, 2032
MhlI GDGCHC 3 cut(s) 763, 946, 1210
MlsI TGGCCA 1 cut(s) 798
MluNI TGGCCA 1 cut(s) 798
MmeI TCCRAC 3 cut(s) 307, 1837, 2128
Mox20I TGGCCA 1 cut(s) 798
MroXI GAANNNNTTC 2 cut(s) 656, 2194
MscI TGGCCA 1 cut(s) 798
MseI TTAA 8 cut(s) 102, 662, 1215, 1719, 1782, 1917, 2015, 2109
MslI CAYNNNNRTG 2 cut(s) 949, 1337
Msp20I TGGCCA 1 cut(s) 798
MspA1I CMGCKG 2 cut(s) 16, 2438
MspI CCGG 4 cut(s) 267, 1064, 2250, 2443
MspR9I CCNGG 2 cut(s) 690, 1065
MunI CAATTG 2 cut(s) 5, 510
Mva1269I GAATGC 2 cut(s) 1256, 2516
MvaI CCWGG 1 cut(s) 690
MwoI GCNNNNNNNGC 4 cut(s) 312, 646, 1400, 1692
NciI CCSGG 1 cut(s) 1065
NcoI CCATGG 2 cut(s) 764, 1969
NdeI CATATG 1 cut(s) 2155
NdeII GATC 5 cut(s) 86, 937, 1024, 2032, 2116
NlaIV GGNNCC 2 cut(s) 1584, 1696
NmuCI GTSAC 3 cut(s) 484, 1306, 2166
NspI RCATGY 3 cut(s) 1149, 2312, 2601
OliI CACNNNNGTG 1 cut(s) 1337
PaeR7I CTCGAG 2 cut(s) 548, 1099
PceI AGGCCT 2 cut(s) 435, 1899
PciI ACATGT 1 cut(s) 2597
PciSI GCTCTTC 1 cut(s) 2499
PctI GAATGC 2 cut(s) 1256, 2516
PdmI GAANNNNTTC 2 cut(s) 656, 2194
PfeI GAWTC 8 cut(s) 905, 1171, 1418, 1565, 1974, 2006, 2354, 2369
PflMI CCANNNNNTGG 1 cut(s) 695
PkrI GCNGC 6 cut(s) 18, 1289, 1344, 1642, 1645, 2537
PmaCI CACGTG 1 cut(s) 930
PmlI CACGTG 1 cut(s) 930
Ppu21I YACGTR 1 cut(s) 930
PscI ACATGT 1 cut(s) 2597
Psp124BI GAGCTC 1 cut(s) 763
Psp6I CCWGG 1 cut(s) 688
PspCI CACGTG 1 cut(s) 930
PspGI CCWGG 1 cut(s) 688
PspN4I GGNNCC 2 cut(s) 1584, 1696
PspPI GGNCC 1 cut(s) 1007
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 2 cut(s) 86, 2032
PvuII CAGCTG 2 cut(s) 16, 2438
RsaI GTAC 7 cut(s) 98, 749, 811, 1097, 1371, 1713, 1883
RsaNI GTAC 7 cut(s) 97, 748, 810, 1096, 1370, 1712, 1882
RseI CAYNNNNRTG 2 cut(s) 949, 1337
SacI GAGCTC 1 cut(s) 763
SapI GCTCTTC 1 cut(s) 2499
SaqAI TTAA 8 cut(s) 102, 662, 1215, 1719, 1782, 1917, 2015, 2109
SatI GCNGC 6 cut(s) 17, 1288, 1343, 1641, 1644, 2536
Sau3AI GATC 5 cut(s) 86, 937, 1024, 2032, 2116
Sau96I GGNCC 1 cut(s) 1007
ScaI AGTACT 1 cut(s) 1883
ScrFI CCNGG 2 cut(s) 690, 1065
SduI GDGCHC 3 cut(s) 763, 946, 1210
SfaNI GCATC 6 cut(s) 794, 1062, 1369, 1857, 2050, 2473
SfcI CTRYAG 1 cut(s) 1044
Sfr274I CTCGAG 2 cut(s) 548, 1099
SinI GGWCC 1 cut(s) 1007
SlaI CTCGAG 2 cut(s) 548, 1099
SmiMI CAYNNNNRTG 2 cut(s) 949, 1337
SmlI CTYRAG 4 cut(s) 56, 548, 886, 1099
SmoI CTYRAG 4 cut(s) 56, 548, 886, 1099
SpeI ACTAGT 2 cut(s) 1453, 1480
SseBI AGGCCT 2 cut(s) 435, 1899
SsiI CCGC 4 cut(s) 640, 772, 1686, 2486
SspI AATATT 2 cut(s) 174, 1544
SstI GAGCTC 1 cut(s) 763
StuI AGGCCT 2 cut(s) 435, 1899
StyD4I CCNGG 2 cut(s) 688, 1063
StyI CCWWGG 2 cut(s) 764, 1969
TaaI ACNGT 9 cut(s) 70, 251, 320, 361, 814, 895, 924, 1283, 1387
TaiI ACGT 3 cut(s) 102, 327, 932
TaqI TCGA 7 cut(s) 549, 677, 919, 940, 1100, 1751, 1902
TatI WGTACW 4 cut(s) 747, 809, 1711, 1881
TfiI GAWTC 8 cut(s) 905, 1171, 1418, 1565, 1974, 2006, 2354, 2369
Tru1I TTAA 8 cut(s) 102, 662, 1215, 1719, 1782, 1917, 2015, 2109
Tru9I TTAA 8 cut(s) 102, 662, 1215, 1719, 1782, 1917, 2015, 2109
TscAI CASTG 3 cut(s) 304, 604, 1743
TseFI GTSAC 3 cut(s) 484, 1306, 2166
TseI GCWGC 6 cut(s) 16, 1287, 1342, 1640, 1643, 2535
Tsp45I GTSAC 3 cut(s) 484, 1306, 2166
TspGWI ACGGA 1 cut(s) 1687
TspRI CASTG 3 cut(s) 304, 604, 1743
Van91I CCANNNNNTGG 1 cut(s) 695
VpaK11BI GGWCC 1 cut(s) 1007
XapI RAATTY 7 cut(s) 145, 345, 880, 1163, 1360, 2103, 2296
XceI RCATGY 3 cut(s) 1149, 2312, 2601
XhoI CTCGAG 2 cut(s) 548, 1099
XmnI GAANNNNTTC 2 cut(s) 656, 2194
ZrmI AGTACT 1 cut(s) 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.