RchiOBHm_Chr5g0005011

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Reverse (-)
3289395 .. 3293587
4193 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28624

Sequence Viewer

Length: 2547 bp
ATGGGCCTCCGGATTACGATCGACATGGGTATTGGCTTGATGGAAAATGTGTGGAGGAATGGTCGAGCTTTTTCACTTGCAGAAGCAATGCGGGTTTTCGGAGAACACATATCTTCAAACTCAATCTCTGTGTTTCATAGAGGTAAAAATGCTTCGGTAGATAGCATAACAAGTGTACAACCTGTGAGGGATGGTGAATTTCTGGTCTCTAAGGGAGAAGTGTTTGAGCTGGGGTTCTTCAGCCCCGGAAAATCCACTTACCGCTATGTTGGAATTTGGTACAAGAAAGATATGAAGAAAACGGTTGTATGGGTTGCAAACAGAGATAATCCTATAAATGATACCTCCGGAGTCCTGACAATTAGTGCTGATCATGGAAACCTCGTCCTCTATGCCAAGAACGAAAGCAATGTTCATCTCTGGTCCACCAACTCCAATGTTTCAACACATGCTGATCCTAAAGCTCAGCTCTTGGACACTGGAAACCTTGTTTTGATTGACAAGGAGAGCCAAAAGGTAACATGGCAAAGCTTTGATTATCCCTCGAATACATTGCTTCCATATATGAAGACAGGAGTGAACAAGCACACGGGATTCAGCTGGTTCCTAACTTCCTGGAAGTCGGAAGATGACCCAGGAACGGGGAATTGCACCTTTGTGATGGACGAAAGTGGAGCTCCTCAAATGATCCTGTACAAAGGTGATGTTCGATGGTGGCAAACTGGCAATTGGAATGGCATTAGGTGGTCGTGGAATAACACCCGGGTAGTGCTGAGTGCTCCTTTCATTTTCAATGCCAGCTACGTGAACAATCAGGATGAGATCAGTAGTACATGGGGTCATCTTAACTCCTCTATCTCCTCAATAATGGTAATAGATGACTCCGGATCAATCCAACAGCTTACGTGGTTTCAAGAAAACCTTGGATGGAAAGAAATGTGGTCTGCGCCGATGGACAAATGTGACTATTACGGCAAGTGTGGAGAATTTGGTTACTGTGACTCTTCCAGTCTTAGCCTGTTTGAGTGCCAATGCCTTCCTGGATTTGAACCCAAGTCACCAGATAAATGGGACATGAGAGATGCATCGGATGGTTGTATGAGGAAACGCATGGCATGCCACAATGGAGAAGGTTTTGTGAAGAAGGAAATGGTGAAAGTTCCTGATATGTCACTAGCAACCATGGATATGAACTTGAGTTGGAAAGAATGTGAGCAGGAGTGCTTGAGGAACTGCTCTTGCTCTGCATACGCAATTCATGGAACCAAAGAAAATGTGAAGGGATGTATGAGATGGTACGGGAATTTAGTAGATACAACCAATTTTGCTGAAGGGGGTCAAGATTTATACGTACGCGTAGATGCAATTGATTTAGCTGAATACACCAAGAAGTCCAGGGATTTTCTTTCCAAAAAGGGGATGCTCTTGATTTTAGTAGTGTCCATTGCTCTGATACTCCTCTTTGTTTTCTTTGGATGTTGGTATTCAAAGAGGAAGAAAAAATACCGTCAGATGGAGGGAAAGCATGATAGCAGTACAACTCATCATGACCTGCCTTTTTTTGAGCTGAAAAGCTTAGTTGCTGCAACAGACAATTTCTCTGATGCTAACAAGCTCGGTGAAGGTGGATTTGGGTCAGTGTATAAGGGTCTACTAGCTACTGGACAAGAGGTCGCTGTGAAAAGATTGTCAAAGAATTCTGGTCAAGGTTTAGAACAATTTAAGAATGAAGTTATGTTGATTGCAAAACTTCAGCACCGGAACCTGGTGAGGCTTTTCGGTTACTGCATCCATGCAGAAGAGAAGATGTTGATCTATGAATACTTACCAAACAAAAGCTTGGACTTCTTCATATTTGATCGACATAGTAGCTCCTTGTTGGACTGGAAAGAGCGTTTTGAGATTATTATTGGAGTTGCTCGAGGGATCTTATACCTTCATCAAGACTCAAGACTGAAAATTATCCATAGGGATTTAAAAGCTAGCAATGCCCTATTGGATTCTACAATGAACCCAAAGATCTCAGATTTTGGACTGGCCAAAATGTTTGGGGAAGACCAAATTCAAGCAACAACAAACAGAGTGATTGGAACTTATGGCTATATGTCACCTGAATATGCAATGGAAGGGCGATATTCAACAAAATCTGATGTTTTTAGCTATGGTGTCTTACTGCTAGAGATCATTAGTGGCAAAAGAGCCACTGTTTACGATACTCAAGATCCCTCCCCAAATTTAATTGGACAGATTTGGGATATGTGGACAGAGAATACAGCATTAAGTATTGTTGATCCATCTCTGGGTCAGTCCTATCCTGCTCATGAGGTCTCAAGATGCATCCAGATTGGGCTGTTGTGTGTGCAAGAATCTGCATCGGATCGGCCATCCATGTCGGCAGTCGTCTCCATGTTGGGTAACGAAACACCTCTTCATTCTCCTAAGAAACCTGCATTCATATTACAGTCTAGCAATCCAAACTCAGCAGCATCAAGTGGAGCACCTGCTTCGCTAAATGATCTAACCATAACTATGCCTGAAGCACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

848

Amino Acids

95.32

Weight (kDa)

6.29

Isoelectric Point (pI)

36.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 101 - 207 4.7e-36 D-mannose binding lectin
S_locus_glycop PF00954 239 - 353 5e-23 S-locus glycoprotein domain
PAN_2 PF08276 373 - 439 2.2e-16 PAN-like domain
Pkinase PF00069 534 - 800 3.2e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 537 - 804 2e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2509
Acc36I ACCTGC 3 cut(s) 1560, 2455, 2509
AccI GTMKAC 1 cut(s) 1651
AccII CGCG 1 cut(s) 1356
AccIII TCCGGA 3 cut(s) 9, 347, 884
AciI CCGC 2 cut(s) 91, 262
AclWI GGATC 7 cut(s) 449, 682, 895, 1934, 2216, 2285, 2385
AcoI YGGCCR 2 cut(s) 2037, 2381
AcsI RAATTY 7 cut(s) 197, 273, 986, 1303, 1696, 2061, 2233
AcuI CTGAAG 3 cut(s) 223, 1350, 1736
AfaI GTAC 7 cut(s) 177, 281, 695, 832, 1298, 1353, 1537
AfiI CCNNNNNNNGG 6 cut(s) 640, 641, 1416, 1513, 1765, 2300
AflIII ACRYGT 1 cut(s) 1354
AgsI TTSAA 8 cut(s) 117, 444, 793, 914, 1049, 1488, 2066, 2139
AhdI GACNNNNNGTC 1 cut(s) 1670
AjnI CCWGG 5 cut(s) 614, 634, 1039, 1394, 1764
AjuI GAANNNNNNNTTGG 2 cut(s) 1614, 1646
AleI CACNNNNGTG 1 cut(s) 656
Alw21I GWGCWC 3 cut(s) 679, 781, 2500
Alw26I GTCTC 3 cut(s) 211, 2332, 2407
AlwI GGATC 7 cut(s) 449, 682, 895, 1934, 2216, 2285, 2385
Ama87I CYCGRG 2 cut(s) 762, 1920
Aor13HI TCCGGA 3 cut(s) 9, 347, 884
AoxI GGCC 3 cut(s) 4, 2037, 2381
ApeKI GCWGC 2 cut(s) 1583, 2483
ApoI RAATTY 7 cut(s) 197, 273, 986, 1303, 1696, 2061, 2233
AspLEI GCGC 1 cut(s) 949
AspS9I GGNCC 2 cut(s) 4, 423
AsuC2I CCSGG 3 cut(s) 246, 763, 764
AsuHPI GGTGA 7 cut(s) 206, 713, 1050, 1165, 1631, 1780, 2100
AsuNHI GCTAGC 1 cut(s) 1982
AvaI CYCGRG 2 cut(s) 762, 1920
AvaII GGWCC 1 cut(s) 423
BalI TGGCCA 1 cut(s) 2039
BanII GRGCYC 1 cut(s) 679
BarI GAAGNNNNNNTAC 4 cut(s) 136, 168, 1487, 1519
BbsI GAAGAC 2 cut(s) 575, 2061
Bbv12I GWGCWC 3 cut(s) 679, 781, 2500
BbvI GCAGC 2 cut(s) 1570, 2495
BceAI ACGGC 1 cut(s) 988
BcgI CGANNNNNNTGC 4 cut(s) 535, 569, 2487, 2521
BciT130I CCWGG 5 cut(s) 616, 636, 1041, 1396, 1766
BclI TGATCA 1 cut(s) 370
BcnI CCSGG 3 cut(s) 246, 763, 764
BcoDI GTCTC 3 cut(s) 211, 2332, 2407
BfaI CTAG 5 cut(s) 1175, 1655, 1983, 2177, 2466
BfuAI ACCTGC 3 cut(s) 1560, 2455, 2509
BglII AGATCT 1 cut(s) 2019
BisI GCNGC 2 cut(s) 1584, 2484
BlpI GCTNAGC 1 cut(s) 465
BlsI GCNGC 2 cut(s) 1585, 2485
Bme1390I CCNGG 8 cut(s) 246, 616, 636, 763, 764, 1041, 1396, 1766
Bme18I GGWCC 1 cut(s) 423
BmeRI GACNNNNNGTC 1 cut(s) 1670
BmeT110I CYCGRG 2 cut(s) 762, 1920
BmgT120I GGNCC 2 cut(s) 4, 423
BmiI GGNNCC 3 cut(s) 605, 1264, 1763
BmrFI CCNGG 8 cut(s) 246, 616, 636, 763, 764, 1041, 1396, 1766
BmtI GCTAGC 1 cut(s) 1986
BpiI GAAGAC 2 cut(s) 575, 2061
Bpu1102I GCTNAGC 1 cut(s) 465
BpuEI CTTGAG 5 cut(s) 1216, 1246, 1933, 2202, 2314
BpuMI CCSGG 3 cut(s) 246, 763, 764
BsaAI YACGTR 3 cut(s) 805, 906, 1351
BsaBI GATNNNNATC 2 cut(s) 17, 1811
BsaI GGTCTC 2 cut(s) 211, 2332
BsaJI CCNNGG 6 cut(s) 244, 634, 762, 922, 1182, 1395
BsaWI WCCGGW 4 cut(s) 9, 347, 884, 1758
BsaXI ACNNNNNCTCC 2 cut(s) 46, 76
Bsc4I CCNNNNNNNGG 6 cut(s) 640, 641, 1416, 1513, 1765, 2300
Bse1I ACTGG 6 cut(s) 484, 727, 1008, 1666, 1889, 2040
Bse3DI GCAATG 6 cut(s) 93, 415, 551, 1443, 1993, 2127
Bse8I GATNNNNATC 2 cut(s) 17, 1811
BseAI TCCGGA 3 cut(s) 9, 347, 884
BseBI CCWGG 5 cut(s) 616, 636, 1041, 1396, 1766
BseDI CCNNGG 6 cut(s) 244, 634, 762, 922, 1182, 1395
BseJI GATNNNNATC 2 cut(s) 17, 1811
BseLI CCNNNNNNNGG 6 cut(s) 640, 641, 1416, 1513, 1765, 2300
BseMI GCAATG 6 cut(s) 93, 415, 551, 1443, 1993, 2127
BseMII CTCAG 4 cut(s) 479, 764, 2037, 2493
BseNI ACTGG 6 cut(s) 484, 727, 1008, 1666, 1889, 2040
BseRI GAGGAG 4 cut(s) 669, 841, 850, 1448
BseXI GCAGC 2 cut(s) 1570, 2495
BseYI CCCAGC 1 cut(s) 229
Bsh1236I CGCG 1 cut(s) 1356
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 3 cut(s) 6, 2039, 2383
BsiEI CGRYCG 1 cut(s) 21
BsiHKAI GWGCWC 3 cut(s) 679, 781, 2500
BsiHKCI CYCGRG 2 cut(s) 762, 1920
BsiSI CCGG 6 cut(s) 10, 246, 348, 763, 885, 1759
BsiWI CGTACG 1 cut(s) 1351
BslFI GGGAC 1 cut(s) 1085
BslI CCNNNNNNNGG 6 cut(s) 640, 641, 1416, 1513, 1765, 2300
BsmAI GTCTC 3 cut(s) 211, 2332, 2407
BsmBI CGTCTC 1 cut(s) 2407
BsmFI GGGAC 1 cut(s) 1085
BsmI GAATGC 1 cut(s) 2450
BsnI GGCC 3 cut(s) 6, 2039, 2383
Bso31I GGTCTC 2 cut(s) 211, 2332
BsoBI CYCGRG 2 cut(s) 762, 1920
Bsp1286I GDGCHC 3 cut(s) 679, 781, 2500
Bsp13I TCCGGA 3 cut(s) 9, 347, 884
Bsp1407I TGTACA 2 cut(s) 175, 693
Bsp1720I GCTNAGC 1 cut(s) 465
Bsp19I CCATGG 1 cut(s) 1182
BspACI CCGC 2 cut(s) 91, 262
BspANI GGCC 3 cut(s) 6, 2039, 2383
BspCNI CTCAG 4 cut(s) 478, 765, 2036, 2492
BspEI TCCGGA 3 cut(s) 9, 347, 884
BspFNI CGCG 1 cut(s) 1356
BspHI TCATGA 2 cut(s) 1546, 2320
BspLI GGNNCC 3 cut(s) 605, 1264, 1763
BspMI ACCTGC 3 cut(s) 1560, 2455, 2509
BspOI GCTAGC 1 cut(s) 1986
BspPI GGATC 7 cut(s) 449, 682, 895, 1934, 2216, 2285, 2385
BspTNI GGTCTC 2 cut(s) 211, 2332
BsrDI GCAATG 6 cut(s) 93, 415, 551, 1443, 1993, 2127
BsrGI TGTACA 2 cut(s) 175, 693
BsrI ACTGG 6 cut(s) 484, 727, 1008, 1666, 1889, 2040
BssECI CCNNGG 6 cut(s) 244, 634, 762, 922, 1182, 1395
BssT1I CCWWGG 2 cut(s) 922, 1182
Bst2UI CCWGG 5 cut(s) 616, 636, 1041, 1396, 1766
Bst4CI ACNGT 5 cut(s) 304, 998, 1508, 2206, 2463
Bst6I CTCTTC 3 cut(s) 1009, 1794, 2433
BstAPI GCANNNNNTGC 1 cut(s) 1116
BstAUI TGTACA 2 cut(s) 175, 693
BstBAI YACGTR 3 cut(s) 805, 906, 1351
BstC8I GCNNGC 4 cut(s) 799, 1117, 1984, 2542
BstDEI CTNAG 8 cut(s) 210, 465, 773, 1013, 1576, 2023, 2439, 2479
BstDSI CCRYGG 1 cut(s) 1182
BstFNI CGCG 1 cut(s) 1356
BstHHI GCGC 1 cut(s) 949
BstMAI GTCTC 3 cut(s) 211, 2332, 2407
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 2 cut(s) 1116, 1988
BstNI CCWGG 5 cut(s) 616, 636, 1041, 1396, 1766
BstNSI RCATGY 2 cut(s) 452, 1119
BstSCI CCNGG 8 cut(s) 244, 614, 634, 761, 762, 1039, 1394, 1764
BstSNI TACGTA 1 cut(s) 1351
BstUI CGCG 1 cut(s) 1356
BstV1I GCAGC 2 cut(s) 1570, 2495
BstV2I GAAGAC 2 cut(s) 575, 2061
BstX2I RGATCY 3 cut(s) 1926, 2019, 2221
BstXI CCANNNNNNTGG 1 cut(s) 1068
BstYI RGATCY 3 cut(s) 1926, 2019, 2221
BsuRI GGCC 3 cut(s) 6, 2039, 2383
BtgI CCRYGG 1 cut(s) 1182
BtsIMutI CAGTG 3 cut(s) 477, 1644, 2202
BveI ACCTGC 3 cut(s) 1560, 2455, 2509
Cac8I GCNNGC 4 cut(s) 799, 1117, 1984, 2542
CciI TCATGA 2 cut(s) 1546, 2320
CfoI GCGC 1 cut(s) 949
Cfr13I GGNCC 2 cut(s) 4, 423
Cfr9I CCCGGG 1 cut(s) 762
CsiI ACCWGGT 1 cut(s) 1764
Csp6I GTAC 7 cut(s) 176, 280, 694, 831, 1297, 1352, 1536
CviQI GTAC 7 cut(s) 176, 280, 694, 831, 1297, 1352, 1536
DdeI CTNAG 8 cut(s) 210, 465, 773, 1013, 1576, 2023, 2439, 2479
DraI TTTAAA 1 cut(s) 1977
DriI GACNNNNNGTC 1 cut(s) 1670
EaeI YGGCCR 2 cut(s) 2037, 2381
Eam1104I CTCTTC 3 cut(s) 1009, 1794, 2433
Eam1105I GACNNNNNGTC 1 cut(s) 1670
EarI CTCTTC 3 cut(s) 1009, 1794, 2433
Ecl136II GAGCTC 1 cut(s) 677
Eco105I TACGTA 1 cut(s) 1351
Eco130I CCWWGG 2 cut(s) 922, 1182
Eco24I GRGCYC 1 cut(s) 679
Eco31I GGTCTC 2 cut(s) 211, 2332
Eco47I GGWCC 1 cut(s) 423
Eco53kI GAGCTC 1 cut(s) 677
Eco57I CTGAAG 3 cut(s) 223, 1350, 1736
Eco88I CYCGRG 2 cut(s) 762, 1920
EcoICRI GAGCTC 1 cut(s) 677
EcoRI GAATTC 1 cut(s) 1696
EcoRII CCWGG 5 cut(s) 614, 634, 1039, 1394, 1764
EcoT14I CCWWGG 2 cut(s) 922, 1182
EcoT22I ATGCAT 2 cut(s) 1087, 2339
EcoT38I GRGCYC 1 cut(s) 679
ErhI CCWWGG 2 cut(s) 922, 1182
Esp3I CGTCTC 1 cut(s) 2407
FalI AAGNNNNNCTT 2 cut(s) 906, 938
FaqI GGGAC 1 cut(s) 1085
FauI CCCGC 1 cut(s) 84
FbaI TGATCA 1 cut(s) 370
FblI GTMKAC 1 cut(s) 1651
Fnu4HI GCNGC 2 cut(s) 1584, 2484
FriOI GRGCYC 1 cut(s) 679
Fsp4HI GCNGC 2 cut(s) 1584, 2484
FspBI CTAG 5 cut(s) 1175, 1655, 1983, 2177, 2466
GlaI GCGC 1 cut(s) 948
GluI GCNGC 2 cut(s) 1584, 2484
GsaI CCCAGC 1 cut(s) 233
HaeIII GGCC 3 cut(s) 6, 2039, 2383
HapII CCGG 6 cut(s) 10, 246, 348, 763, 885, 1759
HhaI GCGC 1 cut(s) 949
Hin6I GCGC 1 cut(s) 947
HinP1I GCGC 1 cut(s) 947
HindIII AAGCTT 3 cut(s) 529, 1573, 1837
HinfI GANTC 7 cut(s) 351, 594, 881, 1001, 1946, 2000, 2366
HpaII CCGG 6 cut(s) 10, 246, 348, 763, 885, 1759
HphI GGTGA 7 cut(s) 206, 713, 1050, 1165, 1631, 1780, 2100
Hpy166II GTNNAC 7 cut(s) 176, 426, 580, 808, 1652, 2209, 2262
Hpy188I TCNGA 9 cut(s) 101, 625, 1090, 1452, 1512, 1603, 2026, 2149, 2377
Hpy8I GTNNAC 7 cut(s) 176, 426, 580, 808, 1652, 2209, 2262
HpyAV CCTTC 8 cut(s) 1046, 1124, 1138, 1273, 1325, 1616, 1946, 2120
HpyCH4III ACNGT 5 cut(s) 304, 998, 1508, 2206, 2463
HpyCH4IV ACGT 3 cut(s) 804, 905, 1350
HpyF10VI GCNNNNNNNGC 2 cut(s) 1116, 1988
HpyF3I CTNAG 8 cut(s) 210, 465, 773, 1013, 1576, 2023, 2439, 2479
HpySE526I ACGT 3 cut(s) 804, 905, 1350
HspAI GCGC 1 cut(s) 947
Kpn2I TCCGGA 3 cut(s) 9, 347, 884
Ksp22I TGATCA 1 cut(s) 370
LmnI GCTCC 5 cut(s) 674, 682, 784, 1877, 2495
Lsp1109I GCAGC 2 cut(s) 1570, 2495
MabI ACCWGGT 1 cut(s) 1764
MaeI CTAG 5 cut(s) 1175, 1655, 1983, 2177, 2466
MaeII ACGT 3 cut(s) 804, 905, 1350
MaeIII GTNAC 9 cut(s) 517, 962, 992, 998, 1056, 1170, 1781, 2106, 2414
MfeI CAATTG 2 cut(s) 727, 1365
MflI RGATCY 3 cut(s) 1926, 2019, 2221
MhlI GDGCHC 3 cut(s) 679, 781, 2500
MlsI TGGCCA 1 cut(s) 2039
MluI ACGCGT 1 cut(s) 1354
MluNI TGGCCA 1 cut(s) 2039
MlyI GAGTC 4 cut(s) 360, 875, 995, 1940
MmeI TCCRAC 5 cut(s) 250, 603, 919, 1181, 1860
Mox20I TGGCCA 1 cut(s) 2039
Mph1103I ATGCAT 2 cut(s) 1087, 2339
MroI TCCGGA 3 cut(s) 9, 347, 884
MscI TGGCCA 1 cut(s) 2039
MseI TTAA 5 cut(s) 846, 1722, 1976, 2237, 2279
MslI CAYNNNNRTG 3 cut(s) 656, 1187, 2528
Msp20I TGGCCA 1 cut(s) 2039
MspA1I CMGCKG 1 cut(s) 600
MspI CCGG 6 cut(s) 10, 246, 348, 763, 885, 1759
MspR9I CCNGG 8 cut(s) 246, 616, 636, 763, 764, 1041, 1396, 1766
MunI CAATTG 2 cut(s) 727, 1365
Mva1269I GAATGC 1 cut(s) 2450
MvaI CCWGG 5 cut(s) 616, 636, 1041, 1396, 1766
MvnI CGCG 1 cut(s) 1356
MwoI GCNNNNNNNGC 2 cut(s) 1116, 1988
NciI CCSGG 3 cut(s) 246, 763, 764
NcoI CCATGG 1 cut(s) 1182
NheI GCTAGC 1 cut(s) 1982
NlaIV GGNNCC 3 cut(s) 605, 1264, 1763
NmuCI GTSAC 5 cut(s) 962, 998, 1056, 1170, 2106
NsiI ATGCAT 2 cut(s) 1087, 2339
NspI RCATGY 2 cut(s) 452, 1119
OliI CACNNNNGTG 1 cut(s) 656
PaeI GCATGC 1 cut(s) 1119
PaeR7I CTCGAG 1 cut(s) 1920
PagI TCATGA 2 cut(s) 1546, 2320
PaqCI CACCTGC 1 cut(s) 2509
PctI GAATGC 1 cut(s) 2450
PfeI GAWTC 3 cut(s) 594, 2000, 2366
Pfl23II CGTACG 1 cut(s) 1351
PfoI TCCNGGA 2 cut(s) 614, 1039
PkrI GCNGC 2 cut(s) 1585, 2485
Ple19I CGATCG 1 cut(s) 21
PleI GAGTC 4 cut(s) 359, 875, 995, 1940
PpsI GAGTC 4 cut(s) 359, 875, 995, 1940
Ppu21I YACGTR 3 cut(s) 805, 906, 1351
Psp124BI GAGCTC 1 cut(s) 679
Psp6I CCWGG 5 cut(s) 614, 634, 1039, 1394, 1764
PspFI CCCAGC 1 cut(s) 229
PspGI CCWGG 5 cut(s) 614, 634, 1039, 1394, 1764
PspLI CGTACG 1 cut(s) 1351
PspN4I GGNNCC 3 cut(s) 605, 1264, 1763
PspPI GGNCC 2 cut(s) 4, 423
PspXI VCTCGAGB 1 cut(s) 1920
PsuI RGATCY 3 cut(s) 1926, 2019, 2221
PvuI CGATCG 1 cut(s) 21
PvuII CAGCTG 1 cut(s) 600
RsaI GTAC 7 cut(s) 177, 281, 695, 832, 1298, 1353, 1537
RsaNI GTAC 7 cut(s) 176, 280, 694, 831, 1297, 1352, 1536
RseI CAYNNNNRTG 3 cut(s) 656, 1187, 2528
SacI GAGCTC 1 cut(s) 679
SaqAI TTAA 5 cut(s) 846, 1722, 1976, 2237, 2279
SatI GCNGC 2 cut(s) 1584, 2484
Sau96I GGNCC 2 cut(s) 4, 423
SchI GAGTC 4 cut(s) 360, 875, 995, 1940
ScrFI CCNGG 8 cut(s) 246, 616, 636, 763, 764, 1041, 1396, 1766
SduI GDGCHC 3 cut(s) 679, 781, 2500
SexAI ACCWGGT 1 cut(s) 1764
Sfr274I CTCGAG 1 cut(s) 1920
SinI GGWCC 1 cut(s) 423
SlaI CTCGAG 1 cut(s) 1920
SmaI CCCGGG 1 cut(s) 764
SmiMI CAYNNNNRTG 3 cut(s) 656, 1187, 2528
SmlI CTYRAG 6 cut(s) 1195, 1225, 1920, 1948, 2217, 2329
SmoI CTYRAG 6 cut(s) 1195, 1225, 1920, 1948, 2217, 2329
SnaBI TACGTA 1 cut(s) 1351
SphI GCATGC 1 cut(s) 1119
SsiI CCGC 2 cut(s) 91, 262
SspMI CTAG 5 cut(s) 1175, 1655, 1983, 2177, 2466
SstI GAGCTC 1 cut(s) 679
StyD4I CCNGG 8 cut(s) 244, 614, 634, 761, 762, 1039, 1394, 1764
StyI CCWWGG 2 cut(s) 922, 1182
TaaI ACNGT 5 cut(s) 304, 998, 1508, 2206, 2463
TaiI ACGT 3 cut(s) 807, 908, 1353
TaqI TCGA 6 cut(s) 21, 64, 545, 709, 1861, 1921
TatI WGTACW 4 cut(s) 175, 693, 830, 1535
TfiI GAWTC 3 cut(s) 594, 2000, 2366
Tru1I TTAA 5 cut(s) 846, 1722, 1976, 2237, 2279
Tru9I TTAA 5 cut(s) 846, 1722, 1976, 2237, 2279
TscAI CASTG 3 cut(s) 484, 1644, 2209
TseFI GTSAC 5 cut(s) 962, 998, 1056, 1170, 2106
TseI GCWGC 2 cut(s) 1583, 2483
Tsp45I GTSAC 5 cut(s) 962, 998, 1056, 1170, 2106
TspMI CCCGGG 1 cut(s) 762
TspRI CASTG 3 cut(s) 484, 1644, 2209
VpaK11BI GGWCC 1 cut(s) 423
XapI RAATTY 7 cut(s) 197, 273, 986, 1303, 1696, 2061, 2233
XceI RCATGY 2 cut(s) 452, 1119
XcmI CCANNNNNNNNNTGG 1 cut(s) 1037
XhoI CTCGAG 1 cut(s) 1920
XmaI CCCGGG 1 cut(s) 762
XmiI GTMKAC 1 cut(s) 1651
XspI CTAG 5 cut(s) 1175, 1655, 1983, 2177, 2466
Zsp2I ATGCAT 2 cut(s) 1087, 2339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.