Rw5G016790

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000099
Physical Location & Seq
Reverse (-)
21385105 .. 21389369
4265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G016790.1

Sequence Viewer

Length: 2493 bp
ATGAGTTCCAGTATCGAAGCGTTTATCCAGATATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTCCCCTTGACGCCCTTACGCTAGACCGTCCCATCAGAGTCGACGGCGACGTTTTAGTCTCTAGCAACCAAATCTTTGTACTAGGGTTCTTCAGCCCCGGAAATTCTGGGCACCGCTACGCTGGAGTTTGGTATAACAAGATTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGACAACCCACTCAATGATTCCTATGGAGTGCTATCGATCAACGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCTACTACCCCTCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTCCCTTCATGAAAATTGAGCTGAACCCGCGGTCCGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAACCGGGAGTTTTACATTGGGGATAGACCCGATGGGGGTTCCGCAGTTGTTTCTGCGCAAGGGTAGAGAAGCATTGTGGCGGAGCGGCCCTTGGACTGGGGACAGATTGAGCGGTACCGTTGGACACTACAATGCAAGTTTTGTCAACAATGAAGACGAGATATCCTTCGTGTATTTTGCTGCTGAGGACTTAGAGATCACAAGGGTGGTGATAGATGAATCAGGAATACTTCAATCGCTGGCATGGAATGATCAATGGATCAAATACTCCTACTACCCGACTGGGTGGTGTGATTCCTATGGACACTGCGGTCCAAATACCAACTGTCATCCAGACAAGGACTATAAGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCTCCTAGATTGGGTCTTAGCAGTGAGGGTGGGTGCATTAGGAAAGCGGAGGCGTCCACATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGAGTGTAAAAATACCAGACTCGTCTACGGCACGTGTGAACATGAGCATGAGTTTGGAAGAGTGCAGACAAAAGTGCTTGATGGATTGTTCCTGCACAGCTTACACGAGTGCGGACGACCGGGGAGGTGAGATCAGGTGTATAACATGGCACGGGGACTTGATGGACACGAGGACTTTCTCCGATGTAGGTAAAGATTTATATGTTCGAGTCGATGCAACTTCTGTAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTCTCTTACTTATCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATCCATTTGAACTTACTGCTGGGTTAACCTACTTCGAAGAAGCTACTGGTGGATTAGCTCTTGATGATAGTAGAATAAACTCGGAGTTACTATTATTTCATCTAAACACCATAGCCACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAAGGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAAGAGAGCACTTTTAAGTTGGACAAGACGCTTTGAGATTATCTTGGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCAAGACTGAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCAAAAAGAATGTTGGTTCCTATGAGAAGTATCCATATTCAAATTTGATTGGACATGTAAGCTTGCAAGCTAGTTTGGGAGTTTTGTGGAAAGAAGGCAGAGCCGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCATGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGCAGTTGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCGAGACGACCCGCATTTTTACTGAAGACAATGGGTTCTAGTGGAGAATCATCCAGCAACAAAGGAGGTAGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

830

Amino Acids

91.89

Weight (kDa)

6.01

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 76 - 181 5e-32 D-mannose binding lectin
S_locus_glycop PF00954 213 - 315 2.5e-18 S-locus glycoprotein domain
PAN_2 PF08276 336 - 402 6.7e-21 PAN-like domain
PK_Tyr_Ser-Thr PF07714 509 - 722 2e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 509 - 781 1.7e-43 Protein kinase domain
DUF3403 PF11883 786 - 830 1.1e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1569
AasI GACNNNNNNGTC 2 cut(s) 128, 870
Acc16I TGCGCA 1 cut(s) 617
Acc65I GGTACC 1 cut(s) 674
AccB1I GGYRCC 2 cut(s) 183, 674
AccB7I CCANNNNNTGG 1 cut(s) 234
AccBSI CCGCTC 2 cut(s) 645, 672
AccI GTMKAC 2 cut(s) 114, 1061
AccII CGCG 1 cut(s) 508
AclI AACGTT 1 cut(s) 354
AclWI GGATC 2 cut(s) 827, 1315
AcoI YGGCCR 2 cut(s) 1627, 2324
AcsI RAATTY 3 cut(s) 175, 2158, 2309
AcuI CTGAAG 3 cut(s) 148, 2010, 2423
AcvI CACGTG 2 cut(s) 921, 1070
AcyI GRCGYC 2 cut(s) 84, 998
AfaI GTAC 3 cut(s) 153, 676, 2473
AfiI CCNNNNNNNGG 6 cut(s) 234, 512, 563, 595, 656, 956
AflIII ACRYGT 4 cut(s) 1004, 1069, 2170, 2468
AjnI CCWGG 1 cut(s) 928
AjuI GAANNNNNNNTTGG 4 cut(s) 1524, 1539, 1556, 1571
AleI CACNNNNGTG 2 cut(s) 764, 2296
AloI GAACNNNNNNTCC 2 cut(s) 494, 526
Alw21I GWGCWC 1 cut(s) 1801
Alw26I GTCTC 3 cut(s) 136, 243, 2377
AlwI GGATC 2 cut(s) 827, 1315
Ama87I CYCGRG 1 cut(s) 556
AoxI GGCC 5 cut(s) 301, 646, 1627, 1905, 2324
ApeKI GCWGC 2 cut(s) 740, 2366
ApoI RAATTY 3 cut(s) 175, 2158, 2309
Asp700I GAANNNNTTC 1 cut(s) 1659
Asp718I GGTACC 1 cut(s) 674
AspLEI GCGC 1 cut(s) 618
AspS9I GGNCC 5 cut(s) 322, 345, 510, 647, 872
AsuC2I CCSGG 6 cut(s) 171, 514, 557, 558, 565, 1157
AsuHPI GGTGA 7 cut(s) 305, 360, 781, 1175, 2025, 2258, 2370
AsuII TTCGAA 2 cut(s) 936, 1425
AvaI CYCGRG 1 cut(s) 556
AvaII GGWCC 4 cut(s) 322, 345, 510, 872
BaeGI GKGCMC 1 cut(s) 186
BalI TGGCCA 1 cut(s) 1629
BanI GGYRCC 2 cut(s) 183, 674
BauI CACGAG 2 cut(s) 1141, 1204
BbrPI CACGTG 2 cut(s) 921, 1070
BbsI GAAGAC 2 cut(s) 720, 2411
Bbv12I GWGCWC 1 cut(s) 1801
BbvCI CCTCAGC 1 cut(s) 744
BbvI GCAGC 2 cut(s) 727, 2378
BccI CCATC 6 cut(s) 113, 290, 586, 1111, 1192, 1580
BceAI ACGGC 4 cut(s) 133, 1080, 1586, 2204
BcgI CGANNNNNNTGC 2 cut(s) 2269, 2303
BciT130I CCWGG 1 cut(s) 930
BciVI GTATCC 3 cut(s) 391, 1569, 2157
BclI TGATCA 1 cut(s) 811
BcnI CCSGG 6 cut(s) 171, 514, 557, 558, 565, 1157
BcoDI GTCTC 3 cut(s) 136, 243, 2377
BfmI CTRYAG 2 cut(s) 1260, 2241
BfuI GTATCC 3 cut(s) 391, 1569, 2157
BglII AGATCT 1 cut(s) 1897
BisI GCNGC 3 cut(s) 646, 741, 2367
BlsI GCNGC 3 cut(s) 647, 742, 2368
Bme1390I CCNGG 7 cut(s) 171, 514, 557, 558, 565, 930, 1157
Bme18I GGWCC 4 cut(s) 322, 345, 510, 872
BmeT110I CYCGRG 1 cut(s) 556
BmgT120I GGNCC 5 cut(s) 322, 345, 510, 647, 872
BmiI GGNNCC 7 cut(s) 185, 324, 562, 600, 676, 1561, 2134
BmrFI CCNGG 7 cut(s) 171, 514, 557, 558, 565, 930, 1157
BmrI ACTGGG 2 cut(s) 666, 852
BmsI GCATC 2 cut(s) 1240, 2353
BmuI ACTGGG 2 cut(s) 666, 852
BpiI GAAGAC 2 cut(s) 720, 2411
BpmI CTGGAG 1 cut(s) 216
Bpu10I CCTNAGC 1 cut(s) 744
Bpu14I TTCGAA 2 cut(s) 936, 1425
BpuEI CTTGAG 1 cut(s) 440
BpuMI CCSGG 6 cut(s) 171, 514, 557, 558, 565, 1157
Bsa29I ATCGAT 1 cut(s) 284
BsaAI YACGTR 2 cut(s) 921, 1070
BsaBI GATNNNNATC 1 cut(s) 1736
BsaHI GRCGYC 2 cut(s) 84, 998
BsaJI CCNNGG 8 cut(s) 169, 506, 556, 650, 929, 1156, 1630, 2220
BsaWI WCCGGW 1 cut(s) 2035
BsaXI ACNNNNNCTCC 6 cut(s) 291, 319, 321, 349, 1508, 1538
Bsc4I CCNNNNNNNGG 6 cut(s) 234, 512, 563, 595, 656, 956
Bse118I RCCGGY 1 cut(s) 2322
Bse1I ACTGG 5 cut(s) 9, 661, 847, 1441, 2119
Bse3DI GCAATG 2 cut(s) 1918, 2052
Bse8I GATNNNNATC 1 cut(s) 1736
BseBI CCWGG 1 cut(s) 930
BseCI ATCGAT 1 cut(s) 284
BseDI CCNNGG 8 cut(s) 169, 506, 556, 650, 929, 1156, 1630, 2220
BseGI GGATG 3 cut(s) 889, 1362, 2429
BseJI GATNNNNATC 1 cut(s) 1736
BseLI CCNNNNNNNGG 6 cut(s) 234, 512, 563, 595, 656, 956
BseMI GCAATG 2 cut(s) 1918, 2052
BseMII CTCAG 3 cut(s) 480, 735, 1871
BseNI ACTGG 5 cut(s) 9, 661, 847, 1441, 2119
BseRI GAGGAG 1 cut(s) 327
BseSI GKGCMC 1 cut(s) 186
BseXI GCAGC 2 cut(s) 727, 2378
BseYI CCCAGC 1 cut(s) 1409
BsgI GTGCAG 2 cut(s) 1114, 1120
Bsh1236I CGCG 1 cut(s) 508
Bsh1285I CGRYCG 1 cut(s) 1156
BshFI GGCC 5 cut(s) 303, 648, 1629, 1907, 2326
BshNI GGYRCC 2 cut(s) 183, 674
BshVI ATCGAT 1 cut(s) 284
BsiEI CGRYCG 1 cut(s) 1156
BsiHKAI GWGCWC 1 cut(s) 1801
BsiHKCI CYCGRG 1 cut(s) 556
BsiSI CCGG 7 cut(s) 171, 513, 557, 564, 1156, 2036, 2323
BslFI GGGAC 3 cut(s) 87, 674, 1205
BslI CCNNNNNNNGG 6 cut(s) 234, 512, 563, 595, 656, 956
BsmAI GTCTC 3 cut(s) 136, 243, 2377
BsmBI CGTCTC 1 cut(s) 2377
BsmFI GGGAC 3 cut(s) 87, 674, 1205
BsmI GAATGC 1 cut(s) 2280
BsnI GGCC 5 cut(s) 303, 648, 1629, 1907, 2326
BsoBI CYCGRG 1 cut(s) 556
Bsp119I TTCGAA 2 cut(s) 936, 1425
Bsp1286I GDGCHC 2 cut(s) 186, 1801
Bsp1407I TGTACA 1 cut(s) 2471
Bsp143I GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
BspANI GGCC 5 cut(s) 303, 648, 1629, 1907, 2326
BspCNI CTCAG 3 cut(s) 479, 736, 1872
BspDI ATCGAT 1 cut(s) 284
BspFNI CGCG 1 cut(s) 508
BspHI TCATGA 2 cut(s) 486, 1864
BspLI GGNNCC 7 cut(s) 185, 324, 562, 600, 676, 1561, 2134
BspPI GGATC 2 cut(s) 827, 1315
BspQI GCTCTTC 1 cut(s) 2376
BspT104I TTCGAA 2 cut(s) 936, 1425
BspT107I GGYRCC 2 cut(s) 183, 674
BsrBI CCGCTC 2 cut(s) 645, 672
BsrDI GCAATG 2 cut(s) 1918, 2052
BsrFI RCCGGY 1 cut(s) 2322
BsrGI TGTACA 1 cut(s) 2471
BsrI ACTGG 5 cut(s) 9, 661, 847, 1441, 2119
BssAI RCCGGY 1 cut(s) 2322
BssECI CCNNGG 8 cut(s) 169, 506, 556, 650, 929, 1156, 1630, 2220
BssMI GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
BssNI GRCGYC 2 cut(s) 84, 998
BssSI CACGAG 2 cut(s) 1141, 1204
BssT1I CCWWGG 2 cut(s) 650, 1630
Bst2BI CACGAG 2 cut(s) 1141, 1204
Bst2UI CCWGG 1 cut(s) 930
Bst4CI ACNGT 6 cut(s) 101, 293, 679, 887, 1318, 2058
Bst6I CTCTTC 6 cut(s) 47, 370, 1089, 1635, 1719, 2376
BstACI GRCGYC 2 cut(s) 84, 998
BstAUI TGTACA 1 cut(s) 2471
BstBAI YACGTR 2 cut(s) 921, 1070
BstBI TTCGAA 2 cut(s) 936, 1425
BstC8I GCNNGC 8 cut(s) 71, 801, 916, 1293, 1909, 2180, 2184, 2488
BstDEI CTNAG 6 cut(s) 466, 744, 751, 962, 1274, 1880
BstDSI CCRYGG 2 cut(s) 506, 2220
BstF5I GGATG 3 cut(s) 889, 1362, 2429
BstFNI CGCG 1 cut(s) 508
BstHHI GCGC 1 cut(s) 618
BstKTI GATC 7 cut(s) 288, 759, 814, 822, 1170, 1310, 1900
BstMAI GTCTC 3 cut(s) 136, 243, 2377
BstMBI GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
BstMCI CGRYCG 1 cut(s) 1156
BstMWI GCNNNNNNNGC 2 cut(s) 505, 1292
BstNI CCWGG 1 cut(s) 930
BstNSI RCATGY 3 cut(s) 1008, 2174, 2472
BstSCI CCNGG 7 cut(s) 169, 512, 555, 556, 563, 928, 1155
BstSFI CTRYAG 2 cut(s) 1260, 2241
BstSLI GKGCMC 1 cut(s) 186
BstUI CGCG 1 cut(s) 508
BstV1I GCAGC 2 cut(s) 727, 2378
BstV2I GAAGAC 2 cut(s) 720, 2411
BstX2I RGATCY 2 cut(s) 1307, 1897
BstXI CCANNNNNNTGG 1 cut(s) 394
BstYI RGATCY 2 cut(s) 1307, 1897
Bsu15I ATCGAT 1 cut(s) 284
BsuI GTATCC 3 cut(s) 391, 1569, 2157
BsuRI GGCC 5 cut(s) 303, 648, 1629, 1907, 2326
BsuTUI ATCGAT 1 cut(s) 284
BtgI CCRYGG 2 cut(s) 506, 2220
BtsCI GGATG 3 cut(s) 889, 1362, 2429
BtsI GCAGTG 3 cut(s) 473, 865, 973
BtsIMutI CAGTG 3 cut(s) 473, 865, 973
Cac8I GCNNGC 8 cut(s) 71, 801, 916, 1293, 1909, 2180, 2184, 2488
CciI TCATGA 2 cut(s) 486, 1864
CfoI GCGC 1 cut(s) 618
Cfr10I RCCGGY 1 cut(s) 2322
Cfr13I GGNCC 5 cut(s) 322, 345, 510, 647, 872
Cfr42I CCGCGG 1 cut(s) 509
Cfr9I CCCGGG 1 cut(s) 556
ClaI ATCGAT 1 cut(s) 284
CpoI CGGWCCG 1 cut(s) 510
CseI GACGC 3 cut(s) 92, 987, 1827
Csp6I GTAC 3 cut(s) 152, 675, 2472
CspCI CAANNNNNGTGG 2 cut(s) 1989, 2024
CspI CGGWCCG 1 cut(s) 510
CviQI GTAC 3 cut(s) 152, 675, 2472
DdeI CTNAG 6 cut(s) 466, 744, 751, 962, 1274, 1880
DpnI GATC 7 cut(s) 287, 758, 813, 821, 1169, 1309, 1899
DpnII GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
DrdI GACNNNNNNGTC 2 cut(s) 128, 870
DseDI GACNNNNNNGTC 2 cut(s) 128, 870
EaeI YGGCCR 2 cut(s) 1627, 2324
Eam1104I CTCTTC 6 cut(s) 47, 370, 1089, 1635, 1719, 2376
EarI CTCTTC 6 cut(s) 47, 370, 1089, 1635, 1719, 2376
EciI GGCGGA 1 cut(s) 655
Eco130I CCWWGG 2 cut(s) 650, 1630
Eco147I AGGCCT 1 cut(s) 303
Eco32I GATATC 1 cut(s) 723
Eco47I GGWCC 4 cut(s) 322, 345, 510, 872
Eco57I CTGAAG 3 cut(s) 148, 2010, 2423
Eco72I CACGTG 2 cut(s) 921, 1070
Eco88I CYCGRG 1 cut(s) 556
EcoO109I RGGNCCY 1 cut(s) 322
EcoRII CCWGG 1 cut(s) 928
EcoRV GATATC 1 cut(s) 723
EcoT14I CCWWGG 2 cut(s) 650, 1630
ErhI CCWWGG 2 cut(s) 650, 1630
Esp3I CGTCTC 1 cut(s) 2377
FaqI GGGAC 3 cut(s) 87, 674, 1205
FauI CCCGC 2 cut(s) 513, 2398
FauNDI CATATG 1 cut(s) 2020
FbaI TGATCA 1 cut(s) 811
FblI GTMKAC 2 cut(s) 114, 1061
Fnu4HI GCNGC 3 cut(s) 646, 741, 2367
FokI GGATG 3 cut(s) 876, 1369, 2416
Fsp4HI GCNGC 3 cut(s) 646, 741, 2367
FspI TGCGCA 1 cut(s) 617
GlaI GCGC 1 cut(s) 617
GluI GCNGC 3 cut(s) 646, 741, 2367
GsaI CCCAGC 1 cut(s) 1413
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 5 cut(s) 303, 648, 1629, 1907, 2326
HapII CCGG 7 cut(s) 171, 513, 557, 564, 1156, 2036, 2323
HgaI GACGC 3 cut(s) 92, 987, 1827
HhaI GCGC 1 cut(s) 618
Hin1I GRCGYC 2 cut(s) 84, 998
Hin6I GCGC 1 cut(s) 616
HinP1I GCGC 1 cut(s) 616
HincII GTYRAC 3 cut(s) 115, 706, 1416
HindII GTYRAC 3 cut(s) 115, 706, 1416
HindIII AAGCTT 3 cut(s) 389, 1538, 2176
HpaI GTTAAC 1 cut(s) 1416
HpaII CCGG 7 cut(s) 171, 513, 557, 564, 1156, 2036, 2323
HphI GGTGA 7 cut(s) 305, 360, 781, 1175, 2025, 2258, 2370
Hpy166II GTNNAC 6 cut(s) 115, 706, 1002, 1062, 1075, 1416
Hpy188I TCNGA 6 cut(s) 110, 469, 1219, 1474, 1665, 2074
Hpy188III TCNNGA 9 cut(s) 28, 218, 487, 783, 893, 1027, 1451, 1865, 1875
Hpy8I GTNNAC 6 cut(s) 115, 706, 1002, 1062, 1075, 1416
Hpy99I CGWCG 2 cut(s) 119, 125
HpyCH4III ACNGT 6 cut(s) 101, 293, 679, 887, 1318, 2058
HpyCH4IV ACGT 4 cut(s) 123, 354, 920, 1069
HpyF10VI GCNNNNNNNGC 2 cut(s) 505, 1292
HpyF3I CTNAG 6 cut(s) 466, 744, 751, 962, 1274, 1880
HpySE526I ACGT 4 cut(s) 123, 354, 920, 1069
Hsp92I GRCGYC 2 cut(s) 84, 998
HspAI GCGC 1 cut(s) 616
KpnI GGTACC 1 cut(s) 678
Ksp22I TGATCA 1 cut(s) 811
KspAI GTTAAC 1 cut(s) 1416
KspI CCGCGG 1 cut(s) 509
Kzo9I GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
LguI GCTCTTC 1 cut(s) 2376
LmnI GCTCC 3 cut(s) 642, 1565, 1981
Lsp1109I GCAGC 2 cut(s) 727, 2378
LweI GCATC 2 cut(s) 1240, 2353
MaeII ACGT 4 cut(s) 123, 354, 920, 1069
MaeIII GTNAC 5 cut(s) 355, 1312, 1476, 2031, 2464
MalI GATC 7 cut(s) 287, 758, 813, 821, 1169, 1309, 1899
MbiI CCGCTC 2 cut(s) 645, 672
MboI GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
MfeI CAATTG 1 cut(s) 2475
MflI RGATCY 2 cut(s) 1307, 1897
MhlI GDGCHC 2 cut(s) 186, 1801
MlsI TGGCCA 1 cut(s) 1629
MluNI TGGCCA 1 cut(s) 1629
MlyI GAGTC 4 cut(s) 120, 1049, 1254, 1763
MmeI TCCRAC 5 cut(s) 498, 661, 1702, 1790, 1993
Mox20I TGGCCA 1 cut(s) 1629
MroXI GAANNNNTTC 1 cut(s) 1659
MscI TGGCCA 1 cut(s) 1629
MseI TTAA 6 cut(s) 1415, 1647, 1695, 1782, 1805, 2354
MslI CAYNNNNRTG 5 cut(s) 690, 764, 1082, 2262, 2296
Msp20I TGGCCA 1 cut(s) 1629
MspA1I CMGCKG 1 cut(s) 508
MspI CCGG 7 cut(s) 171, 513, 557, 564, 1156, 2036, 2323
MspR9I CCNGG 7 cut(s) 171, 514, 557, 558, 565, 930, 1157
MunI CAATTG 1 cut(s) 2475
Mva1269I GAATGC 1 cut(s) 2280
MvaI CCWGG 1 cut(s) 930
MvnI CGCG 1 cut(s) 508
MwoI GCNNNNNNNGC 2 cut(s) 505, 1292
NciI CCSGG 6 cut(s) 171, 514, 557, 558, 565, 1157
NdeI CATATG 1 cut(s) 2020
NdeII GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
NlaIV GGNNCC 7 cut(s) 185, 324, 562, 600, 676, 1561, 2134
NmuCI GTSAC 2 cut(s) 2031, 2464
NsbI TGCGCA 1 cut(s) 617
NspI RCATGY 3 cut(s) 1008, 2174, 2472
NspV TTCGAA 2 cut(s) 936, 1425
OliI CACNNNNGTG 2 cut(s) 764, 2296
PagI TCATGA 2 cut(s) 486, 1864
PceI AGGCCT 1 cut(s) 303
PciI ACATGT 3 cut(s) 1004, 2170, 2468
PciSI GCTCTTC 1 cut(s) 2376
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PctI GAATGC 1 cut(s) 2280
PdmI GAANNNNTTC 1 cut(s) 1659
PflMI CCANNNNNTGG 1 cut(s) 234
PkrI GCNGC 3 cut(s) 647, 742, 2368
PleI GAGTC 4 cut(s) 119, 1049, 1253, 1763
PmaCI CACGTG 2 cut(s) 921, 1070
PmlI CACGTG 2 cut(s) 921, 1070
PpsI GAGTC 4 cut(s) 119, 1049, 1253, 1763
Ppu21I YACGTR 2 cut(s) 921, 1070
PpuMI RGGWCCY 1 cut(s) 322
PscI ACATGT 3 cut(s) 1004, 2170, 2468
PsiI TTATAA 1 cut(s) 1569
Psp1406I AACGTT 1 cut(s) 354
Psp5II RGGWCCY 1 cut(s) 322
Psp6I CCWGG 1 cut(s) 928
PspCI CACGTG 2 cut(s) 921, 1070
PspFI CCCAGC 1 cut(s) 1409
PspGI CCWGG 1 cut(s) 928
PspN4I GGNNCC 7 cut(s) 185, 324, 562, 600, 676, 1561, 2134
PspPI GGNCC 5 cut(s) 322, 345, 510, 647, 872
PspPPI RGGWCCY 1 cut(s) 322
PsuI RGATCY 2 cut(s) 1307, 1897
RsaI GTAC 3 cut(s) 153, 676, 2473
RsaNI GTAC 3 cut(s) 152, 675, 2472
RseI CAYNNNNRTG 5 cut(s) 690, 764, 1082, 2262, 2296
Rsr2I CGGWCCG 1 cut(s) 510
RsrII CGGWCCG 1 cut(s) 510
SacII CCGCGG 1 cut(s) 509
SalI GTCGAC 1 cut(s) 113
SapI GCTCTTC 1 cut(s) 2376
SaqAI TTAA 6 cut(s) 1415, 1647, 1695, 1782, 1805, 2354
SatI GCNGC 3 cut(s) 646, 741, 2367
Sau3AI GATC 7 cut(s) 285, 756, 811, 819, 1167, 1307, 1897
Sau96I GGNCC 5 cut(s) 322, 345, 510, 647, 872
SchI GAGTC 4 cut(s) 120, 1049, 1254, 1763
ScrFI CCNGG 7 cut(s) 171, 514, 557, 558, 565, 930, 1157
SduI GDGCHC 2 cut(s) 186, 1801
SfaNI GCATC 2 cut(s) 1240, 2353
SfcI CTRYAG 2 cut(s) 1260, 2241
Sfr303I CCGCGG 1 cut(s) 509
SfuI TTCGAA 2 cut(s) 936, 1425
SgrBI CCGCGG 1 cut(s) 509
SinI GGWCC 4 cut(s) 322, 345, 510, 872
SmaI CCCGGG 1 cut(s) 558
SmiMI CAYNNNNRTG 5 cut(s) 690, 764, 1082, 2262, 2296
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
SseBI AGGCCT 1 cut(s) 303
SspI AATATT 1 cut(s) 1971
StuI AGGCCT 1 cut(s) 303
StyD4I CCNGG 7 cut(s) 169, 512, 555, 556, 563, 928, 1155
StyI CCWWGG 2 cut(s) 650, 1630
TaaI ACNGT 6 cut(s) 101, 293, 679, 887, 1318, 2058
TaiI ACGT 4 cut(s) 126, 357, 923, 1072
TaqI TCGA 7 cut(s) 15, 114, 284, 936, 1243, 1248, 1425
TatI WGTACW 2 cut(s) 151, 2471
TauI GCSGC 1 cut(s) 648
Tru1I TTAA 6 cut(s) 1415, 1647, 1695, 1782, 1805, 2354
Tru9I TTAA 6 cut(s) 1415, 1647, 1695, 1782, 1805, 2354
TscAI CASTG 3 cut(s) 480, 872, 973
TseFI GTSAC 2 cut(s) 2031, 2464
TseI GCWGC 2 cut(s) 740, 2366
Tsp45I GTSAC 2 cut(s) 2031, 2464
TspGWI ACGGA 1 cut(s) 1552
TspMI CCCGGG 1 cut(s) 556
TspRI CASTG 3 cut(s) 480, 872, 973
Van91I CCANNNNNTGG 1 cut(s) 234
VpaK11BI GGWCC 4 cut(s) 322, 345, 510, 872
XapI RAATTY 3 cut(s) 175, 2158, 2309
XceI RCATGY 3 cut(s) 1008, 2174, 2472
XmaI CCCGGG 1 cut(s) 556
XmiI GTMKAC 2 cut(s) 114, 1061
XmnI GAANNNNTTC 1 cut(s) 1659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.