Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0009702.1

Orthogroup ID

OG0000099

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 2996

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0009702.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

aatgtcagtctctcttcgccaaacagttccatcgtcaagcttctggatacaggaaatcttgtgttgcttgagaatggggatggtcaaagggtggtgtggcaaggctttgattatcccacagatacattgcttcccactatgaaacttggggtggaccgacggtctgggttgaaccggtccctcacatcttggaagtcccaaagtgacccgggaaaagggaactgctcatattgggttgatccaggtgggttacagatgattctttacaaggatggagctccaagttggcggtccgaaattggatcttggactggccagagatggggtgttgtaacaacttttgtgtacaatgaagatgaggtgtccgtggtgactatccctaccaccaatcagtcagcattctccaggacagtactcgatgaatcgggaattcttggacggttcatgtgggacgataggctacatcaatggaccgactattggtctgccccaatagagcgttgtgatttctatggacaatgtggtccaaatggtaactgtgacccatatactgttgacaccacactgattacaatcggttgcagctgcttgcccgggtatgtacccaagtctccggaagattggtatatgagagatgggtcaggtggctgtgtaaatgaaacaggaatatccatgtgccggagtggggaaggtttcgtgaaggtgaaaaatgtaaaactaccagattcctctctggcaagtgtagaaatgagtttaagtttgaaagagtgtgagaaaaagtgcttggaaaattgttcttgcactgcatactcaagtgccaatgagagcagcagagaggttggatgtgtgacatggtatggggacttgatggacacatcaactaatccagatgtcgggcaagatttatatgtccgtgttgatgcagcggtgttagctgaatatgcaaagaagtcaaatgctctaagcaagaagggaaagctagcaatttcattagcctcatcagctgttctcgctttacttttactagtttcccttttgtattggttcataaggaggaagagaaatgctaagcaaacacaagagaaatatatattccgagctagcatggaagactccactggagatgttaatgatgaaaatacgatgcactcagacgtgccattctttgacctgagaaccatagcagcttctacagacaacttttcagttgcaaacaagcttggaaatggtggctttggctcaggcatcctatgtaatggaacggaaatagcagttaaaaggctgtcaaagcattctggccaaggtgtcaaagagtttaagaatgaagttgtgctgattgcaaaactccaacacaggaaccttgtaaggattctaggttattgtgttcaagatgaagaaaagatgctcgtctatgaatacgtgccaaacagaagtttggactttttcatttttgatgaaacaaaaagagcacttttagattggacaaaacgctttgggataatttgtggaattgctagagggatcttataccttcatcaagattcaagattaagaatcatccatagagatctaaaggcgagcaatattctacttgatggttccatgaatcccaaaattgcagattttggaatggctagaatatttagtggagatcaaagcgaagcaagtacaagtcgtgttgttggaacatatggttatatgtcaccagaatatgcaatggaaggactgttttcggtaaagtctgatgtgtatagttttggcgttttactactcgaaatcattacaggcaaaaggaatgctggttattaccatgagaagtatccggattcaaatttggttggccatgtttgggcgttgtggaaagaaggtaaagccttggaaatagttgattcctgtctagacgaagcgtatcctgtcaatggggttctcagatgcatccaaattgcgctcctgtgcgtgcaagaatttgcaacggaccgaccaaccatgccaactgttgttttcatgttaggtaatgatgctgctcttgcttcagcaagacgacctgcatttttagtgaagagaatctattctgatggagagctatctgtaaatgatgtcacatgtacaatggtagaagctcgctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

708

Amino Acids

78.57

Weight (kDa)

5.63

Isoelectric Point (pI)

39.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca	FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica	MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica	Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis	pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis	RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata	RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora	Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa	Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha	Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana	Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	522
Acc36I	ACCTGC	1 cut(s)	2053
AccIII	TCCGGA	2 cut(s)	613, 1822
AciI	CCGC	2 cut(s)	289, 926
AclWI	GGATC	3 cut(s)	233, 310, 1529
AcoI	YGGCCR	3 cut(s)	313, 1297, 1840
AcsI	RAATTY	3 cut(s)	429, 1831, 1964
AcuI	CTGAAG	1 cut(s)	2016
AfaI	GTAC	5 cut(s)	347, 414, 603, 1669, 2107
AfiI	CCNNNNNNNGG	8 cut(s)	215, 322, 480, 678, 685, 893, 1849, 1919
AflIII	ACRYGT	1 cut(s)	2102
AgeI	ACCGGT	1 cut(s)	174
AgsI	TTSAA	5 cut(s)	172, 763, 1388, 1545, 1830
AhdI	GACNNNNNGTC	2 cut(s)	160, 481
AhlI	ACTAGT	1 cut(s)	1024
AjiI	CACGTC	1 cut(s)	1156
AjnI	CCWGG	2 cut(s)	241, 404
AjuI	GAANNNNNNNTTGG	2 cut(s)	767, 799
Alw21I	GWGCWC	2 cut(s)	280, 1471
Alw26I	GTCTC	2 cut(s)	14, 615
AlwI	GGATC	3 cut(s)	233, 310, 1529
Ama87I	CYCGRG	2 cut(s)	208, 593
Aor13HI	TCCGGA	2 cut(s)	613, 1822
AoxI	GGCC	3 cut(s)	313, 1297, 1840
ApeKI	GCWGC	6 cut(s)	582, 585, 828, 923, 1184, 2021
ApoI	RAATTY	3 cut(s)	429, 1831, 1964
AsiGI	ACCGGT	1 cut(s)	174
Asp700I	GAANNNNTTC	1 cut(s)	2068
AspLEI	GCGC	1 cut(s)	1948
AspS9I	GGNCC	6 cut(s)	154, 177, 291, 471, 524, 1975
AsuC2I	CCSGG	4 cut(s)	209, 210, 594, 595
AsuHPI	GGTGA	3 cut(s)	382, 715, 1695
AsuNHI	GCTAGC	2 cut(s)	979, 1100
AvaI	CYCGRG	2 cut(s)	208, 593
AvaII	GGWCC	6 cut(s)	154, 177, 291, 471, 524, 1975
BalI	TGGCCA	3 cut(s)	315, 1299, 1842
BanII	GRGCYC	1 cut(s)	280
BbsI	GAAGAC	1 cut(s)	1116
Bbv12I	GWGCWC	2 cut(s)	280, 1471
BbvI	GCAGC	6 cut(s)	572, 594, 840, 935, 1196, 2008
BccI	CCATC	8 cut(s)	38, 74, 266, 315, 629, 862, 1589, 2069
BciT130I	CCWGG	2 cut(s)	243, 406
BciVI	GTATCC	3 cut(s)	40, 1830, 1920
BcnI	CCSGG	4 cut(s)	209, 210, 594, 595
BcoDI	GTCTC	2 cut(s)	14, 615
BcuI	ACTAGT	1 cut(s)	1024
BfaI	CTAG	7 cut(s)	980, 1025, 1101, 1373, 1515, 1635, 1898
BfmI	CTRYAG	1 cut(s)	1191
BfuAI	ACCTGC	1 cut(s)	2053
BfuI	GTATCC	3 cut(s)	40, 1830, 1920
BglII	AGATCT	1 cut(s)	1567
BisI	GCNGC	6 cut(s)	583, 586, 829, 924, 1185, 2022
BlpI	GCTNAGC	1 cut(s)	1068
BlsI	GCNGC	6 cut(s)	584, 587, 830, 925, 1186, 2023
BmcAI	AGTACT	1 cut(s)	414
Bme1390I	CCNGG	6 cut(s)	209, 210, 243, 406, 594, 595
Bme18I	GGWCC	6 cut(s)	154, 177, 291, 471, 524, 1975
BmeRI	GACNNNNNGTC	2 cut(s)	160, 481
BmeT110I	CYCGRG	2 cut(s)	208, 593
BmgBI	CACGTC	1 cut(s)	1156
BmgT120I	GGNCC	6 cut(s)	154, 177, 291, 471, 524, 1975
BmiI	GGNNCC	3 cut(s)	179, 1358, 1600
BmrFI	CCNGG	6 cut(s)	209, 210, 243, 406, 594, 595
BmsI	GCATC	7 cut(s)	910, 1134, 1254, 1392, 1922, 1944, 2008
BmtI	GCTAGC	2 cut(s)	983, 1104
BpiI	GAAGAC	1 cut(s)	1116
BpmI	CTGGAG	2 cut(s)	388, 1140
Bpu10I	CCTNAGC	1 cut(s)	1240
Bpu1102I	GCTNAGC	1 cut(s)	1068
BpuEI	CTTGAG	2 cut(s)	89, 796
BpuMI	CCSGG	4 cut(s)	209, 210, 594, 595
BsaAI	YACGTR	1 cut(s)	1420
BsaBI	GATNNNNATC	1 cut(s)	572
BsaJI	CCNNGG	5 cut(s)	208, 366, 593, 1300, 1875
BsaWI	WCCGGW	3 cut(s)	174, 613, 1822
Bsc4I	CCNNNNNNNGG	8 cut(s)	215, 322, 480, 678, 685, 893, 1849, 1919
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	2 cut(s)	316, 1123
Bse3DI	GCAATG	2 cut(s)	125, 1722
Bse8I	GATNNNNATC	1 cut(s)	572
BseAI	TCCGGA	2 cut(s)	613, 1822
BseBI	CCWGG	2 cut(s)	243, 406
BseDI	CCNNGG	5 cut(s)	208, 366, 593, 1300, 1875
BseGI	GGATG	6 cut(s)	85, 277, 848, 1245, 1557, 1935
BseJI	GATNNNNATC	1 cut(s)	572
BseLI	CCNNNNNNNGG	8 cut(s)	215, 322, 480, 678, 685, 893, 1849, 1919
BseMI	GCAATG	2 cut(s)	125, 1722
BseMII	CTCAG	4 cut(s)	1163, 1164, 1254, 1942
BseNI	ACTGG	2 cut(s)	316, 1123
BseXI	GCAGC	6 cut(s)	572, 594, 840, 935, 1196, 2008
BshFI	GGCC	3 cut(s)	315, 1299, 1842
BshTI	ACCGGT	1 cut(s)	174
BsiHKAI	GWGCWC	2 cut(s)	280, 1471
BsiHKCI	CYCGRG	2 cut(s)	208, 593
BsiSI	CCGG	6 cut(s)	175, 209, 594, 614, 679, 1823
BslFI	GGGAC	4 cut(s)	163, 181, 464, 875
BslI	CCNNNNNNNGG	8 cut(s)	215, 322, 480, 678, 685, 893, 1849, 1919
BsmAI	GTCTC	2 cut(s)	14, 615
BsmFI	GGGAC	4 cut(s)	163, 181, 464, 875
BsmI	GAATGC	3 cut(s)	398, 1291, 1801
BsnI	GGCC	3 cut(s)	315, 1299, 1842
BsoBI	CYCGRG	2 cut(s)	208, 593
Bsp1286I	GDGCHC	2 cut(s)	280, 1471
Bsp13I	TCCGGA	2 cut(s)	613, 1822
Bsp1407I	TGTACA	2 cut(s)	345, 2105
Bsp143I	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
Bsp1720I	GCTNAGC	1 cut(s)	1068
BspACI	CCGC	2 cut(s)	289, 926
BspANI	GGCC	3 cut(s)	315, 1299, 1842
BspCNI	CTCAG	4 cut(s)	1163, 1164, 1253, 1941
BspEI	TCCGGA	2 cut(s)	613, 1822
BspLI	GGNNCC	3 cut(s)	179, 1358, 1600
BspMI	ACCTGC	1 cut(s)	2053
BspOI	GCTAGC	2 cut(s)	983, 1104
BspPI	GGATC	3 cut(s)	233, 310, 1529
BsrDI	GCAATG	2 cut(s)	125, 1722
BsrFI	RCCGGY	1 cut(s)	174
BsrGI	TGTACA	2 cut(s)	345, 2105
BsrI	ACTGG	2 cut(s)	316, 1123
BssAI	RCCGGY	1 cut(s)	174
BssECI	CCNNGG	5 cut(s)	208, 366, 593, 1300, 1875
BssMI	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
BssT1I	CCWWGG	2 cut(s)	1300, 1875
Bst2UI	CCWGG	2 cut(s)	243, 406
Bst4CI	ACNGT	8 cut(s)	26, 162, 412, 441, 539, 553, 1728, 1996
Bst6I	CTCTTC	3 cut(s)	19, 1052, 2054
BstAUI	TGTACA	2 cut(s)	345, 2105
BstBAI	YACGTR	1 cut(s)	1420
BstC8I	GCNNGC	6 cut(s)	590, 981, 1102, 1579, 1958, 2122
BstDEI	CTNAG	6 cut(s)	962, 1068, 1150, 1172, 1240, 1928
BstDSI	CCRYGG	1 cut(s)	366
BstF5I	GGATG	6 cut(s)	85, 277, 848, 1245, 1557, 1935
BstHHI	GCGC	1 cut(s)	1948
BstKTI	GATC	5 cut(s)	241, 305, 1524, 1570, 1654
BstMAI	GTCTC	2 cut(s)	14, 615
BstMBI	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
BstMWI	GCNNNNNNNGC	6 cut(s)	932, 941, 1001, 1010, 1288, 2027
BstNI	CCWGG	2 cut(s)	243, 406
BstNSI	RCATGY	1 cut(s)	2106
BstSCI	CCNGG	6 cut(s)	207, 208, 241, 404, 592, 593
BstSFI	CTRYAG	1 cut(s)	1191
BstV1I	GCAGC	6 cut(s)	572, 594, 840, 935, 1196, 2008
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	3 cut(s)	302, 1521, 1567
BstYI	RGATCY	3 cut(s)	302, 1521, 1567
BsuI	GTATCC	3 cut(s)	40, 1830, 1920
BsuRI	GGCC	3 cut(s)	315, 1299, 1842
BtgI	CCRYGG	1 cut(s)	366
BtrI	CACGTC	1 cut(s)	1156
BtsCI	GGATG	6 cut(s)	85, 277, 848, 1245, 1557, 1935
BtsI	GCAGTG	1 cut(s)	801
BtsIMutI	CAGTG	3 cut(s)	563, 801, 1116
BveI	ACCTGC	1 cut(s)	2053
Cac8I	GCNNGC	6 cut(s)	590, 981, 1102, 1579, 1958, 2122
CfoI	GCGC	1 cut(s)	1948
Cfr10I	RCCGGY	1 cut(s)	174
Cfr13I	GGNCC	6 cut(s)	154, 177, 291, 471, 524, 1975
Cfr9I	CCCGGG	2 cut(s)	208, 593
CpoI	CGGWCCG	2 cut(s)	291, 1975
Csp6I	GTAC	5 cut(s)	346, 413, 602, 1668, 2106
CspAI	ACCGGT	1 cut(s)	174
CspI	CGGWCCG	2 cut(s)	291, 1975
CviQI	GTAC	5 cut(s)	346, 413, 602, 1668, 2106
DdeI	CTNAG	6 cut(s)	962, 1068, 1150, 1172, 1240, 1928
DpnI	GATC	5 cut(s)	240, 304, 1523, 1569, 1653
DpnII	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
DrdI	GACNNNNNNGTC	1 cut(s)	522
DriI	GACNNNNNGTC	2 cut(s)	160, 481
DseDI	GACNNNNNNGTC	1 cut(s)	522
EaeI	YGGCCR	3 cut(s)	313, 1297, 1840
Eam1104I	CTCTTC	3 cut(s)	19, 1052, 2054
Eam1105I	GACNNNNNGTC	2 cut(s)	160, 481
EarI	CTCTTC	3 cut(s)	19, 1052, 2054
Ecl136II	GAGCTC	1 cut(s)	278
Eco130I	CCWWGG	2 cut(s)	1300, 1875
Eco24I	GRGCYC	1 cut(s)	280
Eco47I	GGWCC	6 cut(s)	154, 177, 291, 471, 524, 1975
Eco53kI	GAGCTC	1 cut(s)	278
Eco57I	CTGAAG	1 cut(s)	2016
Eco88I	CYCGRG	2 cut(s)	208, 593
EcoICRI	GAGCTC	1 cut(s)	278
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	2 cut(s)	241, 404
EcoT14I	CCWWGG	2 cut(s)	1300, 1875
EcoT22I	ATGCAT	1 cut(s)	1937
EcoT38I	GRGCYC	1 cut(s)	280
ErhI	CCWWGG	2 cut(s)	1300, 1875
FaqI	GGGAC	4 cut(s)	163, 181, 464, 875
FauNDI	CATATG	1 cut(s)	1690
Fnu4HI	GCNGC	6 cut(s)	583, 586, 829, 924, 1185, 2022
FokI	GGATG	6 cut(s)	92, 284, 855, 1232, 1544, 1922
FriOI	GRGCYC	1 cut(s)	280
Fsp4HI	GCNGC	6 cut(s)	583, 586, 829, 924, 1185, 2022
FspBI	CTAG	7 cut(s)	980, 1025, 1101, 1373, 1515, 1635, 1898
GlaI	GCGC	1 cut(s)	1947
GluI	GCNGC	6 cut(s)	583, 586, 829, 924, 1185, 2022
GsuI	CTGGAG	2 cut(s)	388, 1140
HaeIII	GGCC	3 cut(s)	315, 1299, 1842
HapII	CCGG	6 cut(s)	175, 209, 594, 614, 679, 1823
HhaI	GCGC	1 cut(s)	1948
Hin6I	GCGC	1 cut(s)	1946
HinP1I	GCGC	1 cut(s)	1946
HincII	GTYRAC	1 cut(s)	556
HindII	GTYRAC	1 cut(s)	556
HindIII	AAGCTT	2 cut(s)	38, 1217
HpaII	CCGG	6 cut(s)	175, 209, 594, 614, 679, 1823
HphI	GGTGA	3 cut(s)	382, 715, 1695
Hpy166II	GTNNAC	3 cut(s)	154, 346, 556
Hpy188I	TCNGA	6 cut(s)	295, 1097, 1153, 1744, 1931, 2074
Hpy8I	GTNNAC	3 cut(s)	154, 346, 556
Hpy99I	CGWCG	1 cut(s)	162
HpyAV	CCTTC	6 cut(s)	683, 694, 964, 1541, 1715, 1859
HpyCH4III	ACNGT	8 cut(s)	26, 162, 412, 441, 539, 553, 1728, 1996
HpyCH4IV	ACGT	2 cut(s)	1155, 1419
HpyF10VI	GCNNNNNNNGC	6 cut(s)	932, 941, 1001, 1010, 1288, 2027
HpyF3I	CTNAG	6 cut(s)	962, 1068, 1150, 1172, 1240, 1928
HpySE526I	ACGT	2 cut(s)	1155, 1419
HspAI	GCGC	1 cut(s)	1946
Kpn2I	TCCGGA	2 cut(s)	613, 1822
Kzo9I	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
LmnI	GCTCC	3 cut(s)	275, 283, 1953
Lsp1109I	GCAGC	6 cut(s)	572, 594, 840, 935, 1196, 2008
LweI	GCATC	7 cut(s)	910, 1134, 1254, 1392, 1922, 1944, 2008
MaeI	CTAG	7 cut(s)	980, 1025, 1101, 1373, 1515, 1635, 1898
MaeII	ACGT	2 cut(s)	1155, 1419
MaeIII	GTNAC	9 cut(s)	203, 249, 331, 370, 533, 539, 847, 1701, 2098
MalI	GATC	5 cut(s)	240, 304, 1523, 1569, 1653
MboI	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
MboII	GAAGA	7 cut(s)	6, 365, 629, 1069, 1121, 1406, 2071
MflI	RGATCY	3 cut(s)	302, 1521, 1567
MhlI	GDGCHC	2 cut(s)	280, 1471
MlsI	TGGCCA	3 cut(s)	315, 1299, 1842
MluNI	TGGCCA	3 cut(s)	315, 1299, 1842
MlyI	GAGTC	1 cut(s)	1106
MmeI	TCCRAC	3 cut(s)	820, 1372, 1663
MnlI	CCTC	7 cut(s)	191, 352, 739, 829, 1006, 1047, 1511
Mox20I	TGGCCA	3 cut(s)	315, 1299, 1842
Mph1103I	ATGCAT	1 cut(s)	1937
MroI	TCCGGA	2 cut(s)	613, 1822
MroXI	GAANNNNTTC	1 cut(s)	2068
MscI	TGGCCA	3 cut(s)	315, 1299, 1842
MseI	TTAA	5 cut(s)	755, 1128, 1275, 1317, 1550
Msp20I	TGGCCA	3 cut(s)	315, 1299, 1842
MspA1I	CMGCKG	3 cut(s)	585, 926, 1004
MspI	CCGG	6 cut(s)	175, 209, 594, 614, 679, 1823
MspR9I	CCNGG	6 cut(s)	209, 210, 243, 406, 594, 595
Mva1269I	GAATGC	3 cut(s)	398, 1291, 1801
MvaI	CCWGG	2 cut(s)	243, 406
MwoI	GCNNNNNNNGC	6 cut(s)	932, 941, 1001, 1010, 1288, 2027
NciI	CCSGG	4 cut(s)	209, 210, 594, 595
NdeI	CATATG	1 cut(s)	1690
NdeII	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
NheI	GCTAGC	2 cut(s)	979, 1100
NlaIV	GGNNCC	3 cut(s)	179, 1358, 1600
NmuCI	GTSAC	6 cut(s)	203, 370, 539, 847, 1701, 2098
NsiI	ATGCAT	1 cut(s)	1937
NspI	RCATGY	1 cut(s)	2106
PciI	ACATGT	1 cut(s)	2102
PctI	GAATGC	3 cut(s)	398, 1291, 1801
PdmI	GAANNNNTTC	1 cut(s)	2068
PfoI	TCCNGGA	1 cut(s)	404
PinAI	ACCGGT	1 cut(s)	174
PkrI	GCNGC	6 cut(s)	584, 587, 830, 925, 1186, 2023
PleI	GAGTC	1 cut(s)	1106
PpsI	GAGTC	1 cut(s)	1106
Ppu21I	YACGTR	1 cut(s)	1420
PscI	ACATGT	1 cut(s)	2102
Psp124BI	GAGCTC	1 cut(s)	280
Psp6I	CCWGG	2 cut(s)	241, 404
PspGI	CCWGG	2 cut(s)	241, 404
PspN4I	GGNNCC	3 cut(s)	179, 1358, 1600
PspPI	GGNCC	6 cut(s)	154, 177, 291, 471, 524, 1975
PsuI	RGATCY	3 cut(s)	302, 1521, 1567
PvuII	CAGCTG	2 cut(s)	585, 1004
RsaI	GTAC	5 cut(s)	347, 414, 603, 1669, 2107
RsaNI	GTAC	5 cut(s)	346, 413, 602, 1668, 2106
Rsr2I	CGGWCCG	2 cut(s)	291, 1975
RsrII	CGGWCCG	2 cut(s)	291, 1975
SacI	GAGCTC	1 cut(s)	280
SaqAI	TTAA	5 cut(s)	755, 1128, 1275, 1317, 1550
SatI	GCNGC	6 cut(s)	583, 586, 829, 924, 1185, 2022
Sau3AI	GATC	5 cut(s)	238, 302, 1521, 1567, 1651
Sau96I	GGNCC	6 cut(s)	154, 177, 291, 471, 524, 1975
ScaI	AGTACT	1 cut(s)	414
SchI	GAGTC	1 cut(s)	1106
ScrFI	CCNGG	6 cut(s)	209, 210, 243, 406, 594, 595
SduI	GDGCHC	2 cut(s)	280, 1471
SfaNI	GCATC	7 cut(s)	910, 1134, 1254, 1392, 1922, 1944, 2008
SfcI	CTRYAG	1 cut(s)	1191
SinI	GGWCC	6 cut(s)	154, 177, 291, 471, 524, 1975
SmaI	CCCGGG	2 cut(s)	210, 595
SmlI	CTYRAG	2 cut(s)	68, 811
SmoI	CTYRAG	2 cut(s)	68, 811
SpeI	ACTAGT	1 cut(s)	1024
SsiI	CCGC	2 cut(s)	289, 926
SspI	AATATT	2 cut(s)	1585, 1641
SspMI	CTAG	7 cut(s)	980, 1025, 1101, 1373, 1515, 1635, 1898
SstI	GAGCTC	1 cut(s)	280
StyD4I	CCNGG	6 cut(s)	207, 208, 241, 404, 592, 593
StyI	CCWWGG	2 cut(s)	1300, 1875
TaaI	ACNGT	8 cut(s)	26, 162, 412, 441, 539, 553, 1728, 1996
TaiI	ACGT	2 cut(s)	1158, 1422
TaqI	TCGA	2 cut(s)	417, 1773
TaqII	GACCGA	3 cut(s)	171, 488, 1992
TatI	WGTACW	4 cut(s)	345, 412, 1667, 2105
Tru1I	TTAA	5 cut(s)	755, 1128, 1275, 1317, 1550
Tru9I	TTAA	5 cut(s)	755, 1128, 1275, 1317, 1550
TscAI	CASTG	3 cut(s)	570, 808, 1123
TseFI	GTSAC	6 cut(s)	203, 370, 539, 847, 1701, 2098
TseI	GCWGC	6 cut(s)	582, 585, 828, 923, 1184, 2021
Tsp45I	GTSAC	6 cut(s)	203, 370, 539, 847, 1701, 2098
TspGWI	ACGGA	4 cut(s)	355, 902, 1277, 1988
TspMI	CCCGGG	2 cut(s)	208, 593
TspRI	CASTG	3 cut(s)	570, 808, 1123
VpaK11BI	GGWCC	6 cut(s)	154, 177, 291, 471, 524, 1975
XapI	RAATTY	3 cut(s)	429, 1831, 1964
XbaI	TCTAGA	1 cut(s)	1897
XceI	RCATGY	1 cut(s)	2106
XmaI	CCCGGG	2 cut(s)	208, 593
XmnI	GAANNNNTTC	1 cut(s)	2068
XspI	CTAG	7 cut(s)	980, 1025, 1101, 1373, 1515, 1635, 1898
ZrmI	AGTACT	1 cut(s)	414
Zsp2I	ATGCAT	1 cut(s)	1937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.