MD05G1333400.v1.1

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
45669336 .. 45670675
1340 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1333400.v1.1.491

Sequence Viewer

Length: 393 bp
ATGAAATTCCGTTTGAATTCCTGGCTTCGCCACTGGTGGGGGGCTGGATCTTGGACCAGTGAAAGATGGTCCAGGGTGCCTGCAATGACGAAAATTTTCATCTTCAACGCTACTTTTGTGAACAATCAAGATGAGGTATCCGTCATGTATGGTATTGTTGATGAATCAATCTTCTCAAAATTGGTGATCGATGAATCAGGAATCCTTGAACGGACCAAATGGCAAGATCAAGCGCATCAATGGGTCAAGTTTTGGTCCGCCCCGGTTAAGCAATGTGATTTTTACTGGAAGTGTGATTTTTACATTGCGGATAAATTTGAGTGCAATTGCCTACCTGGATTCGAACCCAAGTTGCAACATGAGTGGTATTTGAGAGATGGGTCAGGCAGGTGA

Protein Analysis

131

Amino Acids

15.63

Weight (kDa)

6.82

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 13 - 117 5.4e-23 S-locus glycoprotein domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 378
Acc36I ACCTGC 1 cut(s) 378
AccB1I GGYRCC 1 cut(s) 76
AciI CCGC 2 cut(s) 258, 308
AclWI GGATC 1 cut(s) 55
AcsI RAATTY 4 cut(s) 5, 16, 93, 314
AfiI CCNNNNNNNGG 1 cut(s) 37
AgsI TTSAA 3 cut(s) 16, 106, 209
AjnI CCWGG 3 cut(s) 20, 71, 334
AlwI GGATC 1 cut(s) 55
ApoI RAATTY 4 cut(s) 5, 16, 93, 314
Asp700I GAANNNNTTC 1 cut(s) 95
AspLEI GCGC 1 cut(s) 235
AspS9I GGNCC 4 cut(s) 54, 69, 213, 255
AsuC2I CCSGG 1 cut(s) 263
AsuHPI GGTGA 1 cut(s) 196
AsuII TTCGAA 1 cut(s) 342
AvaII GGWCC 4 cut(s) 54, 69, 213, 255
BanI GGYRCC 1 cut(s) 76
BccI CCATC 2 cut(s) 60, 371
BciT130I CCWGG 3 cut(s) 22, 73, 336
BciVI GTATCC 1 cut(s) 148
BcnI CCSGG 1 cut(s) 263
BfuAI ACCTGC 1 cut(s) 378
BfuI GTATCC 1 cut(s) 148
Bme1390I CCNGG 4 cut(s) 22, 73, 263, 336
Bme18I GGWCC 4 cut(s) 54, 69, 213, 255
BmgT120I GGNCC 4 cut(s) 54, 69, 213, 255
BmiI GGNNCC 1 cut(s) 78
BmrFI CCNGG 4 cut(s) 22, 73, 263, 336
BmsI GCATC 1 cut(s) 244
Bpu14I TTCGAA 1 cut(s) 342
BpuMI CCSGG 1 cut(s) 263
Bsa29I ATCGAT 1 cut(s) 189
BsaJI CCNNGG 2 cut(s) 72, 261
Bsc4I CCNNNNNNNGG 1 cut(s) 37
Bse1I ACTGG 3 cut(s) 38, 57, 290
Bse3DI GCAATG 3 cut(s) 90, 278, 303
BseBI CCWGG 3 cut(s) 22, 73, 336
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 2 cut(s) 72, 261
BseLI CCNNNNNNNGG 1 cut(s) 37
BseMI GCAATG 3 cut(s) 90, 278, 303
BseNI ACTGG 3 cut(s) 38, 57, 290
BshNI GGYRCC 1 cut(s) 76
BshVI ATCGAT 1 cut(s) 189
BsiSI CCGG 1 cut(s) 263
BslI CCNNNNNNNGG 1 cut(s) 37
Bsp119I TTCGAA 1 cut(s) 342
Bsp143I GATC 3 cut(s) 47, 186, 226
BspACI CCGC 2 cut(s) 258, 308
BspDI ATCGAT 1 cut(s) 189
BspLI GGNNCC 1 cut(s) 78
BspMI ACCTGC 1 cut(s) 378
BspPI GGATC 1 cut(s) 55
BspT104I TTCGAA 1 cut(s) 342
BspT107I GGYRCC 1 cut(s) 76
BsrDI GCAATG 3 cut(s) 90, 278, 303
BsrI ACTGG 3 cut(s) 38, 57, 290
BssECI CCNNGG 2 cut(s) 72, 261
BssMI GATC 3 cut(s) 47, 186, 226
Bst2UI CCWGG 3 cut(s) 22, 73, 336
BstBI TTCGAA 1 cut(s) 342
BstC8I GCNNGC 1 cut(s) 81
BstHHI GCGC 1 cut(s) 235
BstKTI GATC 3 cut(s) 50, 189, 229
BstMBI GATC 3 cut(s) 47, 186, 226
BstNI CCWGG 3 cut(s) 22, 73, 336
BstSCI CCNGG 4 cut(s) 20, 71, 261, 334
BstX2I RGATCY 1 cut(s) 47
BstYI RGATCY 1 cut(s) 47
Bsu15I ATCGAT 1 cut(s) 189
BsuI GTATCC 1 cut(s) 148
BsuTUI ATCGAT 1 cut(s) 189
BtsIMutI CAGTG 2 cut(s) 31, 64
BveI ACCTGC 1 cut(s) 378
Cac8I GCNNGC 1 cut(s) 81
CfoI GCGC 1 cut(s) 235
Cfr13I GGNCC 4 cut(s) 54, 69, 213, 255
ClaI ATCGAT 1 cut(s) 189
CspCI CAANNNNNGTGG 2 cut(s) 344, 379
CviAII CATG 2 cut(s) 145, 359
CviJI RGCY 2 cut(s) 25, 44
CviKI_1 RGCY 2 cut(s) 25, 44
DpnI GATC 3 cut(s) 49, 188, 228
DpnII GATC 3 cut(s) 47, 186, 226
EciI GGCGGA 1 cut(s) 247
Eco47I GGWCC 4 cut(s) 54, 69, 213, 255
EcoRI GAATTC 1 cut(s) 16
EcoRII CCWGG 3 cut(s) 20, 71, 334
FaeI CATG 2 cut(s) 148, 362
FaiI YATR 3 cut(s) 146, 150, 360
FatI CATG 2 cut(s) 144, 358
GlaI GCGC 1 cut(s) 234
HapII CCGG 1 cut(s) 263
HhaI GCGC 1 cut(s) 235
Hin1II CATG 2 cut(s) 148, 362
Hin6I GCGC 1 cut(s) 233
HinP1I GCGC 1 cut(s) 233
HinfI GANTC 4 cut(s) 164, 194, 201, 339
HpaII CCGG 1 cut(s) 263
HphI GGTGA 1 cut(s) 196
Hpy166II GTNNAC 1 cut(s) 121
Hpy188III TCNNGA 2 cut(s) 128, 198
Hpy8I GTNNAC 1 cut(s) 121
HpyCH4V TGCA 3 cut(s) 83, 324, 355
Hsp92II CATG 2 cut(s) 148, 362
HspAI GCGC 1 cut(s) 233
Kzo9I GATC 3 cut(s) 47, 186, 226
LweI GCATC 1 cut(s) 244
MalI GATC 3 cut(s) 49, 188, 228
MboI GATC 3 cut(s) 47, 186, 226
MboII GAAGA 2 cut(s) 94, 163
MfeI CAATTG 1 cut(s) 325
MflI RGATCY 1 cut(s) 47
MluCI AATT 6 cut(s) 5, 16, 93, 179, 314, 325
MnlI CCTC 1 cut(s) 127
MroXI GAANNNNTTC 1 cut(s) 95
MseI TTAA 1 cut(s) 267
MspI CCGG 1 cut(s) 263
MspR9I CCNGG 4 cut(s) 22, 73, 263, 336
MunI CAATTG 1 cut(s) 325
MvaI CCWGG 3 cut(s) 22, 73, 336
NciI CCSGG 1 cut(s) 263
NdeII GATC 3 cut(s) 47, 186, 226
NlaIII CATG 2 cut(s) 148, 362
NlaIV GGNNCC 1 cut(s) 78
NspV TTCGAA 1 cut(s) 342
PaqCI CACCTGC 1 cut(s) 378
PdmI GAANNNNTTC 1 cut(s) 95
PfeI GAWTC 4 cut(s) 164, 194, 201, 339
Psp6I CCWGG 3 cut(s) 20, 71, 334
PspGI CCWGG 3 cut(s) 20, 71, 334
PspN4I GGNNCC 1 cut(s) 78
PspPI GGNCC 4 cut(s) 54, 69, 213, 255
PsuI RGATCY 1 cut(s) 47
SaqAI TTAA 1 cut(s) 267
Sau3AI GATC 3 cut(s) 47, 186, 226
Sau96I GGNCC 4 cut(s) 54, 69, 213, 255
ScrFI CCNGG 4 cut(s) 22, 73, 263, 336
SetI ASST 3 cut(s) 138, 337, 392
SfaNI GCATC 1 cut(s) 244
SfuI TTCGAA 1 cut(s) 342
SinI GGWCC 4 cut(s) 54, 69, 213, 255
Sse9I AATT 6 cut(s) 5, 16, 93, 179, 314, 325
SsiI CCGC 2 cut(s) 258, 308
StyD4I CCNGG 4 cut(s) 20, 71, 261, 334
TaqI TCGA 2 cut(s) 189, 342
TasI AATT 6 cut(s) 5, 16, 93, 179, 314, 325
TfiI GAWTC 4 cut(s) 164, 194, 201, 339
Tru1I TTAA 1 cut(s) 267
Tru9I TTAA 1 cut(s) 267
TscAI CASTG 2 cut(s) 38, 64
TspDTI ATGAA 4 cut(s) 17, 88, 177, 207
TspGWI ACGGA 2 cut(s) 130, 226
TspRI CASTG 2 cut(s) 38, 64
VpaK11BI GGWCC 4 cut(s) 54, 69, 213, 255
XapI RAATTY 4 cut(s) 5, 16, 93, 314
XmnI GAANNNNTTC 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.