Rorug01G0307800

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
42469111 .. 42469536
426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0307800.1

Sequence Viewer

Length: 426 bp
ATGCCGAAGAACAAAGGAAAGGGAGGCAAGAACCACAAGAGGGGGAAGAACGAAGCCGATGACGAGAAGCGTGAGCTCCTCTTGAAACAGGAGGGCCAGGAATACGCGCAGGTCATACGCATGTTAGGCAACGGCCGATTGGAAGCCAAGTGCCAGGACGGCGTGGCCTGCCTCTGCCACATCTCCGGCAAGCTACACAAGAAGGTCTGGATCGCGGCTGGCGATATTCTCCTCGTTGGGCTAAGAGACTTCCAGGATGGCAAGGCTGATGTCATCTATAAGTACATGCCCGACGAGGCCCGGTTGCTCAAGGCTAATGGGAAGTTGAATGACAGTTTCAGGCCCAATGAGAGCGGCGACCATGATGACGACAACTCTGGCGATGGTTACATAGAGTTTGAGGATGCTGATGTTGATACAATTTGA

Protein Analysis

141

Amino Acids

15.72

Weight (kDa)

5.58

Isoelectric Point (pI)

41.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-1a PF01176 32 - 94 1.7e-22 Translation initiation factor 1A / IF-1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 100
AccBSI CCGCTC 1 cut(s) 354
AccII CGCG 2 cut(s) 107, 215
AciI CCGC 2 cut(s) 215, 354
AclWI GGATC 1 cut(s) 218
AcoI YGGCCR 1 cut(s) 133
AfaI GTAC 1 cut(s) 284
AfiI CCNNNNNNNGG 1 cut(s) 40
AgsI TTSAA 2 cut(s) 85, 328
AjnI CCWGG 3 cut(s) 96, 153, 252
AluBI AGCT 2 cut(s) 76, 193
AluI AGCT 2 cut(s) 76, 193
Alw21I GWGCWC 1 cut(s) 78
Alw26I GTCTC 1 cut(s) 240
AlwI GGATC 1 cut(s) 218
AoxI GGCC 5 cut(s) 94, 133, 165, 297, 341
AspLEI GCGC 1 cut(s) 109
AspS9I GGNCC 3 cut(s) 94, 298, 342
AsuC2I CCSGG 1 cut(s) 301
BanII GRGCYC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 78
BccI CCATC 2 cut(s) 251, 377
BceAI ACGGC 2 cut(s) 148, 175
BciT130I CCWGG 3 cut(s) 98, 155, 254
BcnI CCSGG 1 cut(s) 301
BcoDI GTCTC 1 cut(s) 240
BfuAI ACCTGC 1 cut(s) 100
BglI GCCNNNNNGGC 1 cut(s) 159
BisI GCNGC 2 cut(s) 216, 355
BlsI GCNGC 2 cut(s) 217, 356
Bme1390I CCNGG 4 cut(s) 98, 155, 254, 301
BmgT120I GGNCC 3 cut(s) 94, 298, 342
BmrFI CCNGG 4 cut(s) 98, 155, 254, 301
BmsI GCATC 1 cut(s) 394
BpuEI CTTGAG 1 cut(s) 293
BpuMI CCSGG 1 cut(s) 301
Bsc4I CCNNNNNNNGG 1 cut(s) 40
BseBI CCWGG 3 cut(s) 98, 155, 254
BseGI GGATG 2 cut(s) 262, 409
BseLI CCNNNNNNNGG 1 cut(s) 40
BseRI GAGGAG 2 cut(s) 68, 221
BseX3I CGGCCG 1 cut(s) 133
Bsh1236I CGCG 2 cut(s) 107, 215
Bsh1285I CGRYCG 1 cut(s) 136
BshFI GGCC 5 cut(s) 96, 135, 167, 299, 343
BsiEI CGRYCG 1 cut(s) 136
BsiHKAI GWGCWC 1 cut(s) 78
BsiSI CCGG 2 cut(s) 186, 301
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 240
BsnI GGCC 5 cut(s) 96, 135, 167, 299, 343
Bsp1286I GDGCHC 1 cut(s) 78
Bsp143I GATC 1 cut(s) 210
BspACI CCGC 2 cut(s) 215, 354
BspANI GGCC 5 cut(s) 96, 135, 167, 299, 343
BspFNI CGCG 2 cut(s) 107, 215
BspMI ACCTGC 1 cut(s) 100
BspPI GGATC 1 cut(s) 218
BsrBI CCGCTC 1 cut(s) 354
BssMI GATC 1 cut(s) 210
Bst2UI CCWGG 3 cut(s) 98, 155, 254
Bst4CI ACNGT 1 cut(s) 335
BstC8I GCNNGC 3 cut(s) 169, 191, 220
BstDEI CTNAG 1 cut(s) 242
BstF5I GGATG 2 cut(s) 262, 409
BstFNI CGCG 2 cut(s) 107, 215
BstHHI GCGC 1 cut(s) 109
BstKTI GATC 1 cut(s) 213
BstMAI GTCTC 1 cut(s) 240
BstMBI GATC 1 cut(s) 210
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 3 cut(s) 126, 159, 168
BstNI CCWGG 3 cut(s) 98, 155, 254
BstNSI RCATGY 2 cut(s) 124, 289
BstSCI CCNGG 4 cut(s) 96, 153, 252, 299
BstUI CGCG 2 cut(s) 107, 215
BstZI CGGCCG 1 cut(s) 133
BsuRI GGCC 5 cut(s) 96, 135, 167, 299, 343
BtgZI GCGATG 1 cut(s) 396
BtsCI GGATG 2 cut(s) 262, 409
BveI ACCTGC 1 cut(s) 100
Cac8I GCNNGC 3 cut(s) 169, 191, 220
CfoI GCGC 1 cut(s) 109
Cfr13I GGNCC 3 cut(s) 94, 298, 342
Csp6I GTAC 1 cut(s) 283
CviAII CATG 3 cut(s) 121, 286, 362
CviQI GTAC 1 cut(s) 283
DdeI CTNAG 1 cut(s) 242
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
EaeI YGGCCR 1 cut(s) 133
EagI CGGCCG 1 cut(s) 133
Ecl136II GAGCTC 1 cut(s) 76
EclXI CGGCCG 1 cut(s) 133
Eco24I GRGCYC 1 cut(s) 78
Eco52I CGGCCG 1 cut(s) 133
Eco53kI GAGCTC 1 cut(s) 76
EcoICRI GAGCTC 1 cut(s) 76
EcoRII CCWGG 3 cut(s) 96, 153, 252
EcoT38I GRGCYC 1 cut(s) 78
FaeI CATG 3 cut(s) 124, 289, 365
FaiI YATR 6 cut(s) 116, 122, 279, 287, 363, 392
FatI CATG 3 cut(s) 120, 285, 361
Fnu4HI GCNGC 2 cut(s) 216, 355
FokI GGATG 2 cut(s) 269, 416
FriOI GRGCYC 1 cut(s) 78
Fsp4HI GCNGC 2 cut(s) 216, 355
GlaI GCGC 1 cut(s) 108
GluI GCNGC 2 cut(s) 216, 355
HaeIII GGCC 5 cut(s) 96, 135, 167, 299, 343
HapII CCGG 2 cut(s) 186, 301
HhaI GCGC 1 cut(s) 109
Hin1II CATG 3 cut(s) 124, 289, 365
Hin6I GCGC 1 cut(s) 107
HinP1I GCGC 1 cut(s) 107
HpaII CCGG 2 cut(s) 186, 301
Hpy188III TCNNGA 2 cut(s) 82, 208
Hpy99I CGWCG 1 cut(s) 296
HpyAV CCTTC 1 cut(s) 196
HpyCH4III ACNGT 1 cut(s) 335
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 159, 168
HpyF3I CTNAG 1 cut(s) 242
Hsp92II CATG 3 cut(s) 124, 289, 365
HspAI GCGC 1 cut(s) 107
Kzo9I GATC 1 cut(s) 210
LmnI GCTCC 1 cut(s) 81
LweI GCATC 1 cut(s) 394
MaeIII GTNAC 1 cut(s) 386
MalI GATC 1 cut(s) 212
MbiI CCGCTC 1 cut(s) 354
MboI GATC 1 cut(s) 210
MboII GAAGA 2 cut(s) 19, 58
MhlI GDGCHC 1 cut(s) 78
MluCI AATT 1 cut(s) 420
MnlI CCTC 8 cut(s) 17, 33, 85, 89, 182, 242, 289, 394
MslI CAYNNNNRTG 1 cut(s) 119
MspI CCGG 2 cut(s) 186, 301
MspR9I CCNGG 4 cut(s) 98, 155, 254, 301
MvaI CCWGG 3 cut(s) 98, 155, 254
MvnI CGCG 2 cut(s) 107, 215
MwoI GCNNNNNNNGC 3 cut(s) 126, 159, 168
NciI CCSGG 1 cut(s) 301
NdeII GATC 1 cut(s) 210
NlaIII CATG 3 cut(s) 124, 289, 365
NspI RCATGY 2 cut(s) 124, 289
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PfoI TCCNGGA 1 cut(s) 252
PkrI GCNGC 2 cut(s) 217, 356
Psp124BI GAGCTC 1 cut(s) 78
Psp6I CCWGG 3 cut(s) 96, 153, 252
PspGI CCWGG 3 cut(s) 96, 153, 252
PspPI GGNCC 3 cut(s) 94, 298, 342
RsaI GTAC 1 cut(s) 284
RsaNI GTAC 1 cut(s) 283
RseI CAYNNNNRTG 1 cut(s) 119
SacI GAGCTC 1 cut(s) 78
SatI GCNGC 2 cut(s) 216, 355
Sau3AI GATC 1 cut(s) 210
Sau96I GGNCC 3 cut(s) 94, 298, 342
ScrFI CCNGG 4 cut(s) 98, 155, 254, 301
SduI GDGCHC 1 cut(s) 78
SetI ASST 4 cut(s) 78, 114, 195, 207
SfaNI GCATC 1 cut(s) 394
SmiMI CAYNNNNRTG 1 cut(s) 119
SmlI CTYRAG 1 cut(s) 308
SmoI CTYRAG 1 cut(s) 308
Sse9I AATT 1 cut(s) 420
SsiI CCGC 2 cut(s) 215, 354
SstI GAGCTC 1 cut(s) 78
StyD4I CCNGG 4 cut(s) 96, 153, 252, 299
TaaI ACNGT 1 cut(s) 335
TasI AATT 1 cut(s) 420
TatI WGTACW 1 cut(s) 282
TauI GCSGC 2 cut(s) 218, 357
XceI RCATGY 2 cut(s) 124, 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.