Rw5G022570

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
31359983 .. 31363684
3702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G022570.1

Sequence Viewer

Length: 2277 bp
ATGATCGAAGCGTTTATCCAGATATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGTCAGCTTCCCCTTGACGCCCTTACGCCAGACCGTCCCATCAGAGACGGCGACGTTTTAGTCTCTAGCTCGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAATCCTCAGCACCACTACGTTGGAGTTTGGTATAACAAAATTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAAGTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCACCACACAATTTCACAGCCAAACTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATACTAGCCAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAAATACAGCGCTTCCCTTTATGAAGATTGGGCTGAACCGGCGGTCCGGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAAACGGGAGTTGTACGTGTGGGATAGACCCGATGGGGTTTCCGCAGTTGTTTCTGCGCAGGGGTAGAGAAGCATTGTGGCGGGGCGGCCCTTGGATCGGGGACAGATGGAGCGGTCTAGCTGCAATAACCGCTACCGTTGAAGAATTCAATGTAAGTTTTGTCAACAATGAAGACGAGATATCCTTCGTGTATGGTGTTGCTAGGGACTCAGTGATCACAAGGCTGGTGATAGATGAATCAGGATTATTTCAAGTGTTCGCTTGGAATGATCAATGGATCAAATTCTACTCCTACCCGACTGGGTGGTGTGATTCCTATGGACAGTGCGGTCCAAATACTAACTGTGACCCAGACAAGGACTATAGGTTGGCTTGCACATGCCTACCTGGGTTCGAATCCAAATCACCTAGATTGAGTGTTGGTGAGGGTGGGTGCATTAGGAAAGCGGGAGCGTCCACATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGCGTGCATTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATTCATTTGAACTTACTGCTGGGTCAACCTACTTCGAAGAAGCTACTGGTGGATTAGTTCTTGATGATAGCAGAATAAACTCGGAGTTACTATTATTTCATCTAAACACCGTAGCCACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAAAGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGATGAAGAGAAGATTCTAATCTATGAATATTTACCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAAGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGTAAAAAGAATGCTGGTTCCTCTGAGAAGTATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCCGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATAATAAGGTGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGCAGTTGTTTCAATGTTAAGTAATGATGCAGCTCTTTCTTCACCGAGACGACCCGCATTTTTCCTGAAGACAATGGGTCCTAGTGGAGACTCATCCAGCAACAAAGGAGGTAGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

758

Amino Acids

84.08

Weight (kDa)

6.81

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 176 1.2e-32 D-mannose binding lectin
S_locus_glycop PF00954 208 - 316 3.5e-22 S-locus glycoprotein domain
PK_Tyr_Ser-Thr PF07714 443 - 712 6.7e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 443 - 710 1.3e-43 Protein kinase domain
DUF3403 PF11883 714 - 758 4.4e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1371
AasI GACNNNNNNGTC 3 cut(s) 116, 245, 873
Acc16I TGCGCA 1 cut(s) 602
AccB7I CCANNNNNTGG 1 cut(s) 222
AccBSI CCGCTC 1 cut(s) 657
AccII CGCG 1 cut(s) 1039
AclI AACGTT 1 cut(s) 339
AclWI GGATC 3 cut(s) 647, 830, 1117
AcoI YGGCCR 2 cut(s) 1429, 2108
AcsI RAATTY 5 cut(s) 201, 689, 827, 1960, 2093
AcuI CTGAAG 3 cut(s) 136, 1812, 2207
AcyI GRCGYC 1 cut(s) 75
AfaI GTAC 3 cut(s) 319, 559, 2257
AfeI AGCGCT 1 cut(s) 462
AfiI CCNNNNNNNGG 6 cut(s) 222, 327, 548, 641, 901, 1146
AflIII ACRYGT 4 cut(s) 560, 1004, 1972, 2252
AhdI GACNNNNNGTC 1 cut(s) 2196
AjnI CCWGG 1 cut(s) 931
AjuI GAANNNNNNNTTGG 4 cut(s) 1326, 1341, 1358, 1373
AleI CACNNNNGTG 1 cut(s) 2080
AloI GAACNNNNNNTCC 2 cut(s) 479, 511
AluBI AGCT 8 cut(s) 64, 126, 665, 1049, 1235, 1342, 2153, 2270
AluI AGCT 8 cut(s) 64, 126, 665, 1049, 1235, 1342, 2153, 2270
Alw21I GWGCWC 1 cut(s) 1603
Alw26I GTCTC 5 cut(s) 96, 124, 231, 2161, 2202
AlwI GGATC 3 cut(s) 647, 830, 1117
Ama87I CYCGRG 1 cut(s) 541
Aor51HI AGCGCT 1 cut(s) 462
AoxI GGCC 5 cut(s) 289, 631, 1429, 1707, 2108
ApeKI GCWGC 2 cut(s) 665, 2150
ApoI RAATTY 5 cut(s) 201, 689, 827, 1960, 2093
Asp700I GAANNNNTTC 1 cut(s) 1461
AspLEI GCGC 3 cut(s) 463, 603, 1039
AspS9I GGNCC 6 cut(s) 310, 330, 495, 632, 875, 2198
AsuC2I CCSGG 4 cut(s) 159, 499, 542, 543
AsuHPI GGTGA 8 cut(s) 293, 345, 784, 942, 980, 1827, 2042, 2154
AsuII TTCGAA 2 cut(s) 939, 1227
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 5 cut(s) 310, 330, 495, 875, 2198
BaeI ACNNNNGTAYC 2 cut(s) 301, 334
BalI TGGCCA 1 cut(s) 1431
BbsI GAAGAC 2 cut(s) 723, 2195
Bbv12I GWGCWC 1 cut(s) 1603
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 2 cut(s) 652, 2162
BccI CCATC 5 cut(s) 104, 278, 571, 645, 1382
BceAI ACGGC 3 cut(s) 121, 1388, 1988
BcgI CGANNNNNNTGC 2 cut(s) 2053, 2087
BciT130I CCWGG 1 cut(s) 933
BciVI GTATCC 3 cut(s) 376, 1371, 1959
BclI TGATCA 2 cut(s) 759, 814
BcnI CCSGG 4 cut(s) 159, 499, 542, 543
BcoDI GTCTC 5 cut(s) 96, 124, 231, 2161, 2202
BfmI CTRYAG 2 cut(s) 907, 2025
BfoI RGCGCY 1 cut(s) 464
BfuI GTATCC 3 cut(s) 376, 1371, 1959
BglII AGATCT 1 cut(s) 1699
BisI GCNGC 3 cut(s) 631, 666, 2151
BlsI GCNGC 3 cut(s) 632, 667, 2152
Bme1390I CCNGG 5 cut(s) 159, 499, 542, 543, 933
Bme18I GGWCC 5 cut(s) 310, 330, 495, 875, 2198
BmeRI GACNNNNNGTC 1 cut(s) 2196
BmeT110I CYCGRG 1 cut(s) 541
BmgT120I GGNCC 6 cut(s) 310, 330, 495, 632, 875, 2198
BmiI GGNNCC 4 cut(s) 312, 1363, 1936, 2199
BmrFI CCNGG 5 cut(s) 159, 499, 542, 543, 933
BmrI ACTGGG 2 cut(s) 239, 855
BmsI GCATC 1 cut(s) 2137
BmuI ACTGGG 2 cut(s) 239, 855
BpiI GAAGAC 2 cut(s) 723, 2195
Bpu10I CCTNAGC 1 cut(s) 168
Bpu14I TTCGAA 2 cut(s) 939, 1227
BpuEI CTTGAG 1 cut(s) 425
BpuMI CCSGG 4 cut(s) 159, 499, 542, 543
Bsa29I ATCGAT 1 cut(s) 272
BsaAI YACGTR 1 cut(s) 561
BsaBI GATNNNNATC 1 cut(s) 1538
BsaHI GRCGYC 1 cut(s) 75
BsaJI CCNNGG 6 cut(s) 157, 541, 635, 932, 1432, 2004
BsaWI WCCGGW 1 cut(s) 1837
BsaXI ACNNNNNCTCC 4 cut(s) 279, 309, 1310, 1340
Bsc4I CCNNNNNNNGG 6 cut(s) 222, 327, 548, 641, 901, 1146
Bse118I RCCGGY 2 cut(s) 489, 2106
Bse1I ACTGG 4 cut(s) 245, 850, 1243, 1921
Bse3DI GCAATG 2 cut(s) 1720, 1854
Bse8I GATNNNNATC 1 cut(s) 1538
BseBI CCWGG 1 cut(s) 933
BseCI ATCGAT 1 cut(s) 272
BseDI CCNNGG 6 cut(s) 157, 541, 635, 932, 1432, 2004
BseGI GGATG 2 cut(s) 1164, 2213
BseJI GATNNNNATC 1 cut(s) 1538
BseLI CCNNNNNNNGG 6 cut(s) 222, 327, 548, 641, 901, 1146
BseMI GCAATG 2 cut(s) 1720, 1854
BseMII CTCAG 3 cut(s) 182, 768, 1932
BseNI ACTGG 4 cut(s) 245, 850, 1243, 1921
BseXI GCAGC 2 cut(s) 652, 2162
BseYI CCCAGC 1 cut(s) 1211
Bsh1236I CGCG 1 cut(s) 1039
BshFI GGCC 5 cut(s) 291, 633, 1431, 1709, 2110
BshVI ATCGAT 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 1603
BsiHKCI CYCGRG 1 cut(s) 541
BsiSI CCGG 6 cut(s) 159, 490, 498, 542, 1838, 2107
BslFI GGGAC 3 cut(s) 78, 659, 764
BslI CCNNNNNNNGG 6 cut(s) 222, 327, 548, 641, 901, 1146
BsmAI GTCTC 5 cut(s) 96, 124, 231, 2161, 2202
BsmBI CGTCTC 2 cut(s) 96, 2161
BsmFI GGGAC 3 cut(s) 78, 659, 764
BsmI GAATGC 2 cut(s) 1933, 2064
BsnI GGCC 5 cut(s) 291, 633, 1431, 1709, 2110
BsoBI CYCGRG 1 cut(s) 541
Bsp119I TTCGAA 2 cut(s) 939, 1227
Bsp1286I GDGCHC 1 cut(s) 1603
Bsp1407I TGTACA 1 cut(s) 2255
Bsp143I GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
BspANI GGCC 5 cut(s) 291, 633, 1431, 1709, 2110
BspCNI CTCAG 3 cut(s) 181, 767, 1933
BspDI ATCGAT 1 cut(s) 272
BspFNI CGCG 1 cut(s) 1039
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 4 cut(s) 312, 1363, 1936, 2199
BspPI GGATC 3 cut(s) 647, 830, 1117
BspT104I TTCGAA 2 cut(s) 939, 1227
BsrBI CCGCTC 1 cut(s) 657
BsrDI GCAATG 2 cut(s) 1720, 1854
BsrFI RCCGGY 2 cut(s) 489, 2106
BsrGI TGTACA 1 cut(s) 2255
BsrI ACTGG 4 cut(s) 245, 850, 1243, 1921
BssAI RCCGGY 2 cut(s) 489, 2106
BssECI CCNNGG 6 cut(s) 157, 541, 635, 932, 1432, 2004
BssMI GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
BssNI GRCGYC 1 cut(s) 75
BssT1I CCWWGG 2 cut(s) 635, 1432
Bst2UI CCWGG 1 cut(s) 933
Bst4CI ACNGT 7 cut(s) 92, 682, 870, 890, 1120, 1303, 1860
Bst6I CTCTTC 4 cut(s) 38, 355, 1437, 1521
BstACI GRCGYC 1 cut(s) 75
BstAUI TGTACA 1 cut(s) 2255
BstBAI YACGTR 1 cut(s) 561
BstBI TTCGAA 2 cut(s) 939, 1227
BstC8I GCNNGC 6 cut(s) 128, 919, 1041, 1095, 1711, 2272
BstDEI CTNAG 5 cut(s) 168, 754, 1076, 1682, 1941
BstDSI CCRYGG 1 cut(s) 2004
BstF5I GGATG 2 cut(s) 1164, 2213
BstFNI CGCG 1 cut(s) 1039
BstH2I RGCGCY 1 cut(s) 464
BstHHI GCGC 3 cut(s) 463, 603, 1039
BstKTI GATC 8 cut(s) 6, 276, 642, 762, 817, 825, 1112, 1702
BstMAI GTCTC 5 cut(s) 96, 124, 231, 2161, 2202
BstMBI GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
BstMWI GCNNNNNNNGC 4 cut(s) 490, 674, 1055, 1094
BstNI CCWGG 1 cut(s) 933
BstNSI RCATGY 4 cut(s) 927, 1008, 1976, 2256
BstSCI CCNGG 5 cut(s) 157, 497, 540, 541, 931
BstSFI CTRYAG 2 cut(s) 907, 2025
BstUI CGCG 1 cut(s) 1039
BstV1I GCAGC 2 cut(s) 652, 2162
BstV2I GAAGAC 2 cut(s) 723, 2195
BstX2I RGATCY 2 cut(s) 1109, 1699
BstXI CCANNNNNNTGG 2 cut(s) 182, 379
BstYI RGATCY 2 cut(s) 1109, 1699
Bsu15I ATCGAT 1 cut(s) 272
BsuI GTATCC 3 cut(s) 376, 1371, 1959
BsuRI GGCC 5 cut(s) 291, 633, 1431, 1709, 2110
BsuTUI ATCGAT 1 cut(s) 272
BtgI CCRYGG 1 cut(s) 2004
BtsCI GGATG 2 cut(s) 1164, 2213
BtsIMutI CAGTG 2 cut(s) 762, 875
Cac8I GCNNGC 6 cut(s) 128, 919, 1041, 1095, 1711, 2272
CciI TCATGA 1 cut(s) 1666
CfoI GCGC 3 cut(s) 463, 603, 1039
Cfr10I RCCGGY 2 cut(s) 489, 2106
Cfr13I GGNCC 6 cut(s) 310, 330, 495, 632, 875, 2198
Cfr9I CCCGGG 1 cut(s) 541
ClaI ATCGAT 1 cut(s) 272
CpoI CGGWCCG 1 cut(s) 495
CseI GACGC 3 cut(s) 83, 987, 1629
Csp6I GTAC 3 cut(s) 318, 558, 2256
CspCI CAANNNNNGTGG 2 cut(s) 1791, 1826
CspI CGGWCCG 1 cut(s) 495
CviAII CATG 7 cut(s) 302, 924, 1005, 1667, 1973, 2116, 2253
CviQI GTAC 3 cut(s) 318, 558, 2256
DdeI CTNAG 5 cut(s) 168, 754, 1076, 1682, 1941
DpnI GATC 8 cut(s) 5, 275, 641, 761, 816, 824, 1111, 1701
DpnII GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
DrdI GACNNNNNNGTC 3 cut(s) 116, 245, 873
DriI GACNNNNNGTC 1 cut(s) 2196
DseDI GACNNNNNNGTC 3 cut(s) 116, 245, 873
EaeI YGGCCR 2 cut(s) 1429, 2108
Eam1104I CTCTTC 4 cut(s) 38, 355, 1437, 1521
Eam1105I GACNNNNNGTC 1 cut(s) 2196
EarI CTCTTC 4 cut(s) 38, 355, 1437, 1521
Eco130I CCWWGG 2 cut(s) 635, 1432
Eco147I AGGCCT 1 cut(s) 291
Eco32I GATATC 1 cut(s) 726
Eco47I GGWCC 5 cut(s) 310, 330, 495, 875, 2198
Eco47III AGCGCT 1 cut(s) 462
Eco57I CTGAAG 3 cut(s) 136, 1812, 2207
Eco88I CYCGRG 1 cut(s) 541
EcoO109I RGGNCCY 2 cut(s) 310, 2198
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 1 cut(s) 931
EcoRV GATATC 1 cut(s) 726
EcoT14I CCWWGG 2 cut(s) 635, 1432
ErhI CCWWGG 2 cut(s) 635, 1432
Esp3I CGTCTC 2 cut(s) 96, 2161
FaeI CATG 7 cut(s) 305, 927, 1008, 1670, 1976, 2119, 2256
FaqI GGGAC 3 cut(s) 78, 659, 764
FatI CATG 7 cut(s) 301, 923, 1004, 1666, 1972, 2115, 2252
FauI CCCGC 3 cut(s) 618, 985, 2182
FauNDI CATATG 1 cut(s) 1822
FbaI TGATCA 2 cut(s) 759, 814
Fnu4HI GCNGC 3 cut(s) 631, 666, 2151
FokI GGATG 2 cut(s) 1171, 2200
Fsp4HI GCNGC 3 cut(s) 631, 666, 2151
FspI TGCGCA 1 cut(s) 602
GlaI GCGC 3 cut(s) 462, 602, 1038
GluI GCNGC 3 cut(s) 631, 666, 2151
GsaI CCCAGC 1 cut(s) 1215
HaeII RGCGCY 1 cut(s) 464
HaeIII GGCC 5 cut(s) 291, 633, 1431, 1709, 2110
HapII CCGG 6 cut(s) 159, 490, 498, 542, 1838, 2107
HgaI GACGC 3 cut(s) 83, 987, 1629
HhaI GCGC 3 cut(s) 463, 603, 1039
Hin1I GRCGYC 1 cut(s) 75
Hin1II CATG 7 cut(s) 305, 927, 1008, 1670, 1976, 2119, 2256
Hin6I GCGC 3 cut(s) 461, 601, 1037
HinP1I GCGC 3 cut(s) 461, 601, 1037
HincII GTYRAC 2 cut(s) 709, 1218
HindII GTYRAC 2 cut(s) 709, 1218
HindIII AAGCTT 1 cut(s) 1340
HpaII CCGG 6 cut(s) 159, 490, 498, 542, 1838, 2107
HphI GGTGA 8 cut(s) 293, 345, 784, 942, 980, 1827, 2042, 2154
Hpy166II GTNNAC 3 cut(s) 709, 1002, 1218
Hpy188I TCNGA 5 cut(s) 101, 1276, 1467, 1876, 1942
Hpy188III TCNNGA 9 cut(s) 19, 206, 786, 1027, 1253, 1627, 1667, 1677, 2185
Hpy8I GTNNAC 3 cut(s) 709, 1002, 1218
Hpy99I CGWCG 1 cut(s) 113
HpyAV CCTTC 9 cut(s) 47, 428, 739, 1013, 1024, 1078, 1343, 1847, 1988
HpyCH4III ACNGT 7 cut(s) 92, 682, 870, 890, 1120, 1303, 1860
HpyCH4IV ACGT 4 cut(s) 111, 180, 339, 560
HpyF10VI GCNNNNNNNGC 4 cut(s) 490, 674, 1055, 1094
HpyF3I CTNAG 5 cut(s) 168, 754, 1076, 1682, 1941
HpySE526I ACGT 4 cut(s) 111, 180, 339, 560
Hsp92I GRCGYC 1 cut(s) 75
Hsp92II CATG 7 cut(s) 305, 927, 1008, 1670, 1976, 2119, 2256
HspAI GCGC 3 cut(s) 461, 601, 1037
Ksp22I TGATCA 2 cut(s) 759, 814
Kzo9I GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
LmnI GCTCC 4 cut(s) 654, 995, 1367, 1783
Lsp1109I GCAGC 2 cut(s) 652, 2162
LweI GCATC 1 cut(s) 2137
MaeII ACGT 4 cut(s) 111, 180, 339, 560
MaeIII GTNAC 6 cut(s) 340, 890, 1114, 1278, 1833, 2248
MalI GATC 8 cut(s) 5, 275, 641, 761, 816, 824, 1111, 1701
MbiI CCGCTC 1 cut(s) 657
MboI GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
MfeI CAATTG 1 cut(s) 2259
MflI RGATCY 2 cut(s) 1109, 1699
MhlI GDGCHC 1 cut(s) 1603
MlsI TGGCCA 1 cut(s) 1431
MluNI TGGCCA 1 cut(s) 1431
MlyI GAGTC 3 cut(s) 746, 1565, 2204
MmeI TCCRAC 5 cut(s) 163, 483, 1504, 1592, 1795
Mox20I TGGCCA 1 cut(s) 1431
MroXI GAANNNNTTC 1 cut(s) 1461
MscI TGGCCA 1 cut(s) 1431
MseI TTAA 5 cut(s) 1449, 1497, 1584, 1607, 2138
MslI CAYNNNNRTG 1 cut(s) 2080
Msp20I TGGCCA 1 cut(s) 1431
MspI CCGG 6 cut(s) 159, 490, 498, 542, 1838, 2107
MspR9I CCNGG 5 cut(s) 159, 499, 542, 543, 933
MunI CAATTG 1 cut(s) 2259
Mva1269I GAATGC 2 cut(s) 1933, 2064
MvaI CCWGG 1 cut(s) 933
MvnI CGCG 1 cut(s) 1039
MwoI GCNNNNNNNGC 4 cut(s) 490, 674, 1055, 1094
NciI CCSGG 4 cut(s) 159, 499, 542, 543
NdeI CATATG 1 cut(s) 1822
NdeII GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
NlaIII CATG 7 cut(s) 305, 927, 1008, 1670, 1976, 2119, 2256
NlaIV GGNNCC 4 cut(s) 312, 1363, 1936, 2199
NmuCI GTSAC 3 cut(s) 890, 1833, 2248
NsbI TGCGCA 1 cut(s) 602
NspI RCATGY 4 cut(s) 927, 1008, 1976, 2256
NspV TTCGAA 2 cut(s) 939, 1227
OliI CACNNNNGTG 1 cut(s) 2080
PagI TCATGA 1 cut(s) 1666
PceI AGGCCT 1 cut(s) 291
PciI ACATGT 3 cut(s) 1004, 1972, 2252
PctI GAATGC 2 cut(s) 1933, 2064
PdmI GAANNNNTTC 1 cut(s) 1461
PfeI GAWTC 8 cut(s) 254, 782, 857, 941, 1534, 1673, 2018, 2033
PflMI CCANNNNNTGG 1 cut(s) 222
PkrI GCNGC 3 cut(s) 632, 667, 2152
PleI GAGTC 3 cut(s) 746, 1565, 2204
PpsI GAGTC 3 cut(s) 746, 1565, 2204
Ppu21I YACGTR 1 cut(s) 561
PpuMI RGGWCCY 2 cut(s) 310, 2198
PscI ACATGT 3 cut(s) 1004, 1972, 2252
PsiI TTATAA 1 cut(s) 1371
Psp1406I AACGTT 1 cut(s) 339
Psp5II RGGWCCY 2 cut(s) 310, 2198
Psp6I CCWGG 1 cut(s) 931
PspFI CCCAGC 1 cut(s) 1211
PspGI CCWGG 1 cut(s) 931
PspN4I GGNNCC 4 cut(s) 312, 1363, 1936, 2199
PspPI GGNCC 6 cut(s) 310, 330, 495, 632, 875, 2198
PspPPI RGGWCCY 2 cut(s) 310, 2198
PsuI RGATCY 2 cut(s) 1109, 1699
RsaI GTAC 3 cut(s) 319, 559, 2257
RsaNI GTAC 3 cut(s) 318, 558, 2256
RseI CAYNNNNRTG 1 cut(s) 2080
Rsr2I CGGWCCG 1 cut(s) 495
RsrII CGGWCCG 1 cut(s) 495
SaqAI TTAA 5 cut(s) 1449, 1497, 1584, 1607, 2138
SatI GCNGC 3 cut(s) 631, 666, 2151
Sau3AI GATC 8 cut(s) 3, 273, 639, 759, 814, 822, 1109, 1699
Sau96I GGNCC 6 cut(s) 310, 330, 495, 632, 875, 2198
SchI GAGTC 3 cut(s) 746, 1565, 2204
ScrFI CCNGG 5 cut(s) 159, 499, 542, 543, 933
SduI GDGCHC 1 cut(s) 1603
SfaNI GCATC 1 cut(s) 2137
SfcI CTRYAG 2 cut(s) 907, 2025
SfuI TTCGAA 2 cut(s) 939, 1227
SinI GGWCC 5 cut(s) 310, 330, 495, 875, 2198
SmaI CCCGGG 1 cut(s) 543
SmiMI CAYNNNNRTG 1 cut(s) 2080
SmlI CTYRAG 1 cut(s) 404
SmoI CTYRAG 1 cut(s) 404
SseBI AGGCCT 1 cut(s) 291
SspI AATATT 3 cut(s) 1193, 1550, 1773
StuI AGGCCT 1 cut(s) 291
StyD4I CCNGG 5 cut(s) 157, 497, 540, 541, 931
StyI CCWWGG 2 cut(s) 635, 1432
TaaI ACNGT 7 cut(s) 92, 682, 870, 890, 1120, 1303, 1860
TaiI ACGT 4 cut(s) 114, 183, 342, 563
TaqI TCGA 5 cut(s) 6, 272, 939, 1227, 1626
TatI WGTACW 1 cut(s) 2255
TauI GCSGC 1 cut(s) 633
TfiI GAWTC 8 cut(s) 254, 782, 857, 941, 1534, 1673, 2018, 2033
Tru1I TTAA 5 cut(s) 1449, 1497, 1584, 1607, 2138
Tru9I TTAA 5 cut(s) 1449, 1497, 1584, 1607, 2138
TscAI CASTG 2 cut(s) 762, 875
TseFI GTSAC 3 cut(s) 890, 1833, 2248
TseI GCWGC 2 cut(s) 665, 2150
Tsp45I GTSAC 3 cut(s) 890, 1833, 2248
TspGWI ACGGA 1 cut(s) 1354
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 2 cut(s) 762, 875
Van91I CCANNNNNTGG 1 cut(s) 222
VpaK11BI GGWCC 5 cut(s) 310, 330, 495, 875, 2198
XapI RAATTY 5 cut(s) 201, 689, 827, 1960, 2093
XceI RCATGY 4 cut(s) 927, 1008, 1976, 2256
XmaI CCCGGG 1 cut(s) 541
XmnI GAANNNNTTC 1 cut(s) 1461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.