Rroxscaffold_1G00070630

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000099
Physical Location & Seq
Forward (+)
91563196 .. 91566555
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00070630.1

Sequence Viewer

Length: 2484 bp
ATGTTTAATATGGCAGAAATCTTGATTTTTACAAAAGCGCTGTTTCTTACAACGCTTGTTCAAATCGTTCTTCTCTGGTGTTGCAGTGCTTCGTTAGATAGCGTAACAAGTGTACAACCTGTGAGGGATGGTGAATTTCTGGTCTCTAAGGGAGAAGTGTTTGAGCTGGGGTTCTTCAGCCCCGGAAAATCCACTTATCGCTATGTTGGAATTTGGTACAAGAAAGATATAAAGAAAACGGTTGTATGGGTTGCAAACAGAGATAATCCTATAAATGATACCTCCGGAGTCCTGACAATTAGTGCTGATCATGGAAACCTCGTCCTCTATGCCAAGAACCAAAGCAATGTTCATCTCTGGTCCACCAACTCCAATGTTTCAACACATGCTGATCCTAAAGCTCAGCTCTTAGACACTGGAAACCTTGTTTTGATTGACAAGGAGAGCCAAAAGGTAACATGGCAAAGCTTTGATTATCCCTCGAATACATTGCTTCCATATATGAAGACAGGAGTGAACAAGCACACGGGATTCAGCTGGTTCCTAACTTCCTGGAAGTCGGAAGATGACCCAGGAACGGGGAATTGCACCTTTGTGATGGACGAAAGTGGAGCTCCTCAAATGATCTTGTACAAAGGAGATGTTCGATGGTGGCGAACTGGCAATTGGAATGGCATTAGGTGGTCGTGGAATAACACCCGGGTAGTGCTGAGTGCTCCTTTCATTTTCAATGCCAGCTACGTGAACAATCAGGATGAGATCAGTAGTACATGGGGTCATCTTAACTCCTCTATCTCCACAATAATGGTAATAGATGACTCCGGATCAATCCAACAGCTTACGTGGTTTGAAGAAAACCTTGGATGGAAAGAAATGTGGTCGGCGCCAATGGACAAATGTGACTATTACGGCAAGTGTGGAGAATTTGGTTACTGTGACTCTTCCAGTCTTAGCCTGTTTGAGTGCCAATGCCTTCCTGGATTTGAACCCAAGTCACCTGATAAATGGGACATGAGAGATGCATCGGATGGTTGTATGAGGAAACGCATGGCATGCCAAAATGGAGAAGGTTTTGTGAAGAAGGAAAACGTGAAAGTTCCTGATATGTCACTAGCAACCAAGGATATGAACTTGAATTGGAAAGAATGTGAGCAGGAGTGCTTGAGGAACTGCTCTTGCTCTGCATACGCAATTCATGGAACCAAAGAAACTGTGAAGGGATGCATGAGATGGTACGGGAATTTAGTAGATACGACCAATTTTGCTGAAGGGGGTCAAGATTTATACATACGTGTAGATGCAATTGATTTAGCTGAATTCACCAAGAAGTCCAGGGATTTTCTTGCCAAAAAGGGGATGCTCTTGATTTTAGTAGTGTCCATTGCTCTGATACTCCTCTTTGTTTTCTTTGGATATTGGTATTCAAAGAGGAAGAGAAAATACCATCAGATGGAGGGAAAGCATGATAGCAGTACAACTCATCATGACCTGCCTTTTTTTGAGGTGAAAAGCTTAGTTGCTGCAACAGACAATTTCTCTGATGCTAACAAGCTCGGTGAAGGTGGATTTGGGTCAGTGTATAAGGGCCTACTAGCTACTGGACAAGAGGTCGCTGTGAAAAGATTGTCAAAGAATTCTGGTCAAGGTTTAGAACAATTTAAGAATGAAGTTATGTTGATTGCAAAACTTCAGCACCGGAACCTGGTGGGGCTTTTCGGTTACTGCATCCATGCAGAAGAGAAGATGTTGATCTATGAATACTTACCAAACAAAAGCTTGGACTTCTTCATATTTGATCGAAGTAGTAGCTCCTTGTTGGACTGGAAAGAGCGTTTTGAGATTATTATTGGAGTTGCTCGAGGGATCTTATATCTTCATCAAGACTCGAGACTGAAAATTATCCATAGGGATTTAAAGGCTAGCAATGTCCTATTGGATTCTACAATGAACCCAAAGATCTCAGATTTCGGACTGGCCAAAATGTTTGGGGAAGACCAAATTCAAGCAACAACAAACAGAGTGATTGGAACTTATGGTTATATGTCACCCGAATATGCAATGCAAGGGCGATATTCAACAAAATCTGATGTTTTTAGCTATGGTGTCTTACTGCTAGAGATCATTAGTGGTAAAAGAGCCACTGTTTACGATACTCAAGGTCCCTCCCCAAGTTTAATTGGACAGATTTGGGATATGTGGACAGAGAATACAGCATTAAGTATTGTTGATCCATCTCTGGGTCAGTCCTATCCTGCTCATGAGGTCTCAAGAGGCATCCAGATTGGGCTGTTGTGTGTGCAAGAATCTGCATCAGATCGGCCATCCATGTCGGCAGTTGTCTCCATGTTGGGTAACGAAACACCTCTTCATTCTCCTAAGAAACCTGCATTCATATTACAGTCTAGCAATCCAAACTCAGCAGCATCAAGAGGAGCGCCTGCTTCGCTAAATGATCTAACCATAACTATGCCTGAAGCACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin DUF3403 PAN_2 Pkinase Pkinase_Tyr S_locus_glycop

Protein Analysis

827

Amino Acids

92.93

Weight (kDa)

6.28

Isoelectric Point (pI)

37.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 80 - 186 5.1e-36 D-mannose binding lectin
S_locus_glycop PF00954 218 - 332 8.5e-24 S-locus glycoprotein domain
PAN_2 PF08276 352 - 418 1.2e-16 PAN-like domain
Pkinase PF00069 513 - 713 8.4e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 516 - 783 4.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1497, 2392
AccB1I GGYRCC 1 cut(s) 883
AccB7I CCANNNNNTGG 1 cut(s) 1450
AccIII TCCGGA 2 cut(s) 284, 821
AclWI GGATC 4 cut(s) 386, 832, 1871, 2222
AcoI YGGCCR 2 cut(s) 1974, 2318
AcsI RAATTY 7 cut(s) 134, 210, 923, 1240, 1316, 1633, 1998
AcuI CTGAAG 3 cut(s) 160, 1287, 1673
AcyI GRCGYC 1 cut(s) 884
AfaI GTAC 6 cut(s) 114, 218, 632, 769, 1235, 1474
AfeI AGCGCT 1 cut(s) 39
AfiI CCNNNNNNNGG 6 cut(s) 577, 578, 1353, 1450, 1702, 2237
AflIII ACRYGT 1 cut(s) 1291
AgsI TTSAA 9 cut(s) 62, 381, 730, 851, 986, 1135, 1425, 2003, 2076
AhdI GACNNNNNGTC 1 cut(s) 1607
AjnI CCWGG 5 cut(s) 551, 571, 976, 1331, 1701
AjuI GAANNNNNNNTTGG 8 cut(s) 333, 365, 649, 681, 843, 875, 1551, 1583
AleI CACNNNNGTG 1 cut(s) 593
Alw21I GWGCWC 2 cut(s) 616, 718
Alw26I GTCTC 4 cut(s) 148, 1882, 2269, 2344
AlwI GGATC 4 cut(s) 386, 832, 1871, 2222
Ama87I CYCGRG 3 cut(s) 699, 1857, 1885
Aor13HI TCCGGA 2 cut(s) 284, 821
Aor51HI AGCGCT 1 cut(s) 39
AoxI GGCC 3 cut(s) 1585, 1974, 2318
ApeKI GCWGC 2 cut(s) 1520, 2420
ApoI RAATTY 7 cut(s) 134, 210, 923, 1240, 1316, 1633, 1998
AspLEI GCGC 3 cut(s) 40, 886, 2437
AspS9I GGNCC 3 cut(s) 360, 1585, 2159
AsuC2I CCSGG 3 cut(s) 183, 700, 701
AsuHPI GGTGA 6 cut(s) 143, 987, 1312, 1516, 1568, 2037
AsuNHI GCTAGC 1 cut(s) 1919
AvaI CYCGRG 3 cut(s) 699, 1857, 1885
AvaII GGWCC 2 cut(s) 360, 2159
BalI TGGCCA 1 cut(s) 1976
BanI GGYRCC 1 cut(s) 883
BanII GRGCYC 1 cut(s) 616
BarI GAAGNNNNNNTAC 2 cut(s) 1424, 1456
BbsI GAAGAC 2 cut(s) 512, 1998
Bbv12I GWGCWC 2 cut(s) 616, 718
BbvI GCAGC 2 cut(s) 1507, 2432
BceAI ACGGC 1 cut(s) 925
BcgI CGANNNNNNTGC 2 cut(s) 472, 506
BciT130I CCWGG 5 cut(s) 553, 573, 978, 1333, 1703
BclI TGATCA 1 cut(s) 307
BcnI CCSGG 3 cut(s) 183, 700, 701
BcoDI GTCTC 4 cut(s) 148, 1882, 2269, 2344
BfaI CTAG 5 cut(s) 1112, 1592, 1920, 2114, 2403
BfoI RGCGCY 3 cut(s) 41, 887, 2438
BfuAI ACCTGC 2 cut(s) 1497, 2392
BglII AGATCT 1 cut(s) 1956
BisI GCNGC 2 cut(s) 1521, 2421
BlpI GCTNAGC 1 cut(s) 402
BlsI GCNGC 2 cut(s) 1522, 2422
Bme1390I CCNGG 8 cut(s) 183, 553, 573, 700, 701, 978, 1333, 1703
Bme18I GGWCC 2 cut(s) 360, 2159
BmeRI GACNNNNNGTC 1 cut(s) 1607
BmeT110I CYCGRG 3 cut(s) 699, 1857, 1885
BmgT120I GGNCC 3 cut(s) 360, 1585, 2159
BmiI GGNNCC 5 cut(s) 542, 885, 1201, 1700, 2161
BmrFI CCNGG 8 cut(s) 183, 553, 573, 700, 701, 978, 1333, 1703
BmtI GCTAGC 1 cut(s) 1923
BpiI GAAGAC 2 cut(s) 512, 1998
Bpu1102I GCTNAGC 1 cut(s) 402
BpuEI CTTGAG 3 cut(s) 1183, 2139, 2251
BpuMI CCSGG 3 cut(s) 183, 700, 701
BsaAI YACGTR 3 cut(s) 742, 843, 1292
BsaBI GATNNNNATC 1 cut(s) 1748
BsaHI GRCGYC 1 cut(s) 884
BsaI GGTCTC 2 cut(s) 148, 2269
BsaJI CCNNGG 6 cut(s) 181, 571, 699, 859, 1119, 1332
BsaWI WCCGGW 3 cut(s) 284, 821, 1695
Bsc4I CCNNNNNNNGG 6 cut(s) 577, 578, 1353, 1450, 1702, 2237
Bse1I ACTGG 6 cut(s) 421, 664, 945, 1603, 1826, 1977
Bse3DI GCAATG 5 cut(s) 352, 488, 1380, 1930, 2064
Bse8I GATNNNNATC 1 cut(s) 1748
BseAI TCCGGA 2 cut(s) 284, 821
BseBI CCWGG 5 cut(s) 553, 573, 978, 1333, 1703
BseDI CCNNGG 6 cut(s) 181, 571, 699, 859, 1119, 1332
BseGI GGATG 9 cut(s) 133, 760, 869, 1033, 1226, 1362, 1725, 2274, 2321
BseJI GATNNNNATC 1 cut(s) 1748
BseLI CCNNNNNNNGG 6 cut(s) 577, 578, 1353, 1450, 1702, 2237
BseMI GCAATG 5 cut(s) 352, 488, 1380, 1930, 2064
BseMII CTCAG 4 cut(s) 416, 701, 1974, 2430
BseNI ACTGG 6 cut(s) 421, 664, 945, 1603, 1826, 1977
BseRI GAGGAG 4 cut(s) 606, 778, 1385, 2445
BseXI GCAGC 2 cut(s) 1507, 2432
BseYI CCCAGC 1 cut(s) 166
BshFI GGCC 3 cut(s) 1587, 1976, 2320
BshNI GGYRCC 1 cut(s) 883
BsiHKAI GWGCWC 2 cut(s) 616, 718
BsiHKCI CYCGRG 3 cut(s) 699, 1857, 1885
BsiSI CCGG 5 cut(s) 183, 285, 700, 822, 1696
BslFI GGGAC 2 cut(s) 1022, 2145
BslI CCNNNNNNNGG 6 cut(s) 577, 578, 1353, 1450, 1702, 2237
BsmAI GTCTC 4 cut(s) 148, 1882, 2269, 2344
BsmFI GGGAC 2 cut(s) 1022, 2145
BsmI GAATGC 1 cut(s) 2387
BsnI GGCC 3 cut(s) 1587, 1976, 2320
Bso31I GGTCTC 2 cut(s) 148, 2269
BsoBI CYCGRG 3 cut(s) 699, 1857, 1885
Bsp1286I GDGCHC 2 cut(s) 616, 718
Bsp13I TCCGGA 2 cut(s) 284, 821
Bsp1407I TGTACA 2 cut(s) 112, 630
Bsp1720I GCTNAGC 1 cut(s) 402
BspANI GGCC 3 cut(s) 1587, 1976, 2320
BspCNI CTCAG 4 cut(s) 415, 702, 1973, 2429
BspEI TCCGGA 2 cut(s) 284, 821
BspHI TCATGA 2 cut(s) 1483, 2257
BspLI GGNNCC 5 cut(s) 542, 885, 1201, 1700, 2161
BspMI ACCTGC 2 cut(s) 1497, 2392
BspOI GCTAGC 1 cut(s) 1923
BspPI GGATC 4 cut(s) 386, 832, 1871, 2222
BspT107I GGYRCC 1 cut(s) 883
BspTNI GGTCTC 2 cut(s) 148, 2269
BsrDI GCAATG 5 cut(s) 352, 488, 1380, 1930, 2064
BsrGI TGTACA 2 cut(s) 112, 630
BsrI ACTGG 6 cut(s) 421, 664, 945, 1603, 1826, 1977
BssECI CCNNGG 6 cut(s) 181, 571, 699, 859, 1119, 1332
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 2 cut(s) 859, 1119
Bst2UI CCWGG 5 cut(s) 553, 573, 978, 1333, 1703
Bst4CI ACNGT 5 cut(s) 241, 935, 1213, 2143, 2400
Bst6I CTCTTC 4 cut(s) 946, 1427, 1731, 2370
BstACI GRCGYC 1 cut(s) 884
BstAPI GCANNNNNTGC 1 cut(s) 1053
BstAUI TGTACA 2 cut(s) 112, 630
BstBAI YACGTR 3 cut(s) 742, 843, 1292
BstC8I GCNNGC 5 cut(s) 736, 1054, 1921, 2439, 2479
BstDEI CTNAG 9 cut(s) 147, 402, 409, 710, 950, 1513, 1960, 2376, 2416
BstF5I GGATG 9 cut(s) 133, 760, 869, 1033, 1226, 1362, 1725, 2274, 2321
BstH2I RGCGCY 3 cut(s) 41, 887, 2438
BstHHI GCGC 3 cut(s) 40, 886, 2437
BstMAI GTCTC 4 cut(s) 148, 1882, 2269, 2344
BstMWI GCNNNNNNNGC 2 cut(s) 1053, 2443
BstNI CCWGG 5 cut(s) 553, 573, 978, 1333, 1703
BstNSI RCATGY 2 cut(s) 389, 1056
BstSCI CCNGG 8 cut(s) 181, 551, 571, 698, 699, 976, 1331, 1701
BstV1I GCAGC 2 cut(s) 1507, 2432
BstV2I GAAGAC 2 cut(s) 512, 1998
BstX2I RGATCY 2 cut(s) 1863, 1956
BstXI CCANNNNNNTGG 1 cut(s) 805
BstYI RGATCY 2 cut(s) 1863, 1956
BsuRI GGCC 3 cut(s) 1587, 1976, 2320
BtsCI GGATG 9 cut(s) 133, 760, 869, 1033, 1226, 1362, 1725, 2274, 2321
BtsI GCAGTG 1 cut(s) 91
BtsIMutI CAGTG 4 cut(s) 91, 414, 1581, 2139
BveI ACCTGC 2 cut(s) 1497, 2392
Cac8I GCNNGC 5 cut(s) 736, 1054, 1921, 2439, 2479
CciI TCATGA 2 cut(s) 1483, 2257
CfoI GCGC 3 cut(s) 40, 886, 2437
Cfr13I GGNCC 3 cut(s) 360, 1585, 2159
Cfr9I CCCGGG 1 cut(s) 699
CsiI ACCWGGT 1 cut(s) 1701
Csp6I GTAC 6 cut(s) 113, 217, 631, 768, 1234, 1473
CviQI GTAC 6 cut(s) 113, 217, 631, 768, 1234, 1473
DdeI CTNAG 9 cut(s) 147, 402, 409, 710, 950, 1513, 1960, 2376, 2416
DinI GGCGCC 1 cut(s) 885
DraI TTTAAA 1 cut(s) 1914
DriI GACNNNNNGTC 1 cut(s) 1607
EaeI YGGCCR 2 cut(s) 1974, 2318
Eam1104I CTCTTC 4 cut(s) 946, 1427, 1731, 2370
Eam1105I GACNNNNNGTC 1 cut(s) 1607
EarI CTCTTC 4 cut(s) 946, 1427, 1731, 2370
Ecl136II GAGCTC 1 cut(s) 614
Eco130I CCWWGG 2 cut(s) 859, 1119
Eco24I GRGCYC 1 cut(s) 616
Eco31I GGTCTC 2 cut(s) 148, 2269
Eco47I GGWCC 2 cut(s) 360, 2159
Eco47III AGCGCT 1 cut(s) 39
Eco53kI GAGCTC 1 cut(s) 614
Eco57I CTGAAG 3 cut(s) 160, 1287, 1673
Eco88I CYCGRG 3 cut(s) 699, 1857, 1885
EcoICRI GAGCTC 1 cut(s) 614
EcoO109I RGGNCCY 2 cut(s) 1585, 2159
EcoRI GAATTC 2 cut(s) 1316, 1633
EcoRII CCWGG 5 cut(s) 551, 571, 976, 1331, 1701
EcoT14I CCWWGG 2 cut(s) 859, 1119
EcoT22I ATGCAT 2 cut(s) 1024, 1226
EcoT38I GRGCYC 1 cut(s) 616
EgeI GGCGCC 1 cut(s) 885
EheI GGCGCC 1 cut(s) 885
ErhI CCWWGG 2 cut(s) 859, 1119
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 2 cut(s) 1022, 2145
FbaI TGATCA 1 cut(s) 307
Fnu4HI GCNGC 2 cut(s) 1521, 2421
FokI GGATG 9 cut(s) 140, 767, 876, 1040, 1233, 1369, 1712, 2261, 2308
FriOI GRGCYC 1 cut(s) 616
Fsp4HI GCNGC 2 cut(s) 1521, 2421
FspBI CTAG 5 cut(s) 1112, 1592, 1920, 2114, 2403
GlaI GCGC 3 cut(s) 39, 885, 2436
GluI GCNGC 2 cut(s) 1521, 2421
GsaI CCCAGC 1 cut(s) 170
HaeII RGCGCY 3 cut(s) 41, 887, 2438
HaeIII GGCC 3 cut(s) 1587, 1976, 2320
HapII CCGG 5 cut(s) 183, 285, 700, 822, 1696
HhaI GCGC 3 cut(s) 40, 886, 2437
Hin1I GRCGYC 1 cut(s) 884
Hin6I GCGC 3 cut(s) 38, 884, 2435
HinP1I GCGC 3 cut(s) 38, 884, 2435
HindIII AAGCTT 3 cut(s) 466, 1510, 1774
HinfI GANTC 7 cut(s) 288, 531, 818, 938, 1883, 1937, 2303
HpaII CCGG 5 cut(s) 183, 285, 700, 822, 1696
HphI GGTGA 6 cut(s) 143, 987, 1312, 1516, 1568, 2037
Hpy166II GTNNAC 6 cut(s) 113, 363, 517, 745, 2146, 2199
Hpy188I TCNGA 9 cut(s) 562, 1027, 1389, 1449, 1540, 1963, 1970, 2086, 2314
Hpy8I GTNNAC 6 cut(s) 113, 363, 517, 745, 2146, 2199
HpyAV CCTTC 6 cut(s) 983, 1061, 1075, 1210, 1262, 1553
HpyCH4III ACNGT 5 cut(s) 241, 935, 1213, 2143, 2400
HpyCH4IV ACGT 4 cut(s) 741, 842, 1089, 1291
HpyF10VI GCNNNNNNNGC 2 cut(s) 1053, 2443
HpyF3I CTNAG 9 cut(s) 147, 402, 409, 710, 950, 1513, 1960, 2376, 2416
HpySE526I ACGT 4 cut(s) 741, 842, 1089, 1291
Hsp92I GRCGYC 1 cut(s) 884
HspAI GCGC 3 cut(s) 38, 884, 2435
KasI GGCGCC 1 cut(s) 883
Kpn2I TCCGGA 2 cut(s) 284, 821
Ksp22I TGATCA 1 cut(s) 307
LmnI GCTCC 5 cut(s) 611, 619, 721, 1814, 2432
Lsp1109I GCAGC 2 cut(s) 1507, 2432
MabI ACCWGGT 1 cut(s) 1701
MaeI CTAG 5 cut(s) 1112, 1592, 1920, 2114, 2403
MaeII ACGT 4 cut(s) 741, 842, 1089, 1291
MfeI CAATTG 2 cut(s) 664, 1302
MflI RGATCY 2 cut(s) 1863, 1956
MhlI GDGCHC 2 cut(s) 616, 718
MlsI TGGCCA 1 cut(s) 1976
MluNI TGGCCA 1 cut(s) 1976
Mly113I GGCGCC 1 cut(s) 884
MlyI GAGTC 4 cut(s) 297, 812, 932, 1877
MmeI TCCRAC 4 cut(s) 187, 540, 856, 1797
Mox20I TGGCCA 1 cut(s) 1976
Mph1103I ATGCAT 2 cut(s) 1024, 1226
MroI TCCGGA 2 cut(s) 284, 821
MscI TGGCCA 1 cut(s) 1976
MseI TTAA 6 cut(s) 6, 783, 1659, 1913, 2174, 2216
MslI CAYNNNNRTG 3 cut(s) 593, 803, 2465
Msp20I TGGCCA 1 cut(s) 1976
MspA1I CMGCKG 1 cut(s) 537
MspI CCGG 5 cut(s) 183, 285, 700, 822, 1696
MspR9I CCNGG 8 cut(s) 183, 553, 573, 700, 701, 978, 1333, 1703
MunI CAATTG 2 cut(s) 664, 1302
Mva1269I GAATGC 1 cut(s) 2387
MvaI CCWGG 5 cut(s) 553, 573, 978, 1333, 1703
MwoI GCNNNNNNNGC 2 cut(s) 1053, 2443
NarI GGCGCC 1 cut(s) 884
NciI CCSGG 3 cut(s) 183, 700, 701
NheI GCTAGC 1 cut(s) 1919
NlaIV GGNNCC 5 cut(s) 542, 885, 1201, 1700, 2161
NmuCI GTSAC 5 cut(s) 899, 935, 993, 1107, 2043
NsiI ATGCAT 2 cut(s) 1024, 1226
NspI RCATGY 2 cut(s) 389, 1056
OliI CACNNNNGTG 1 cut(s) 593
PaeI GCATGC 1 cut(s) 1056
PaeR7I CTCGAG 2 cut(s) 1857, 1885
PagI TCATGA 2 cut(s) 1483, 2257
PcsI WCGNNNNNNNCGW 1 cut(s) 652
PctI GAATGC 1 cut(s) 2387
PfeI GAWTC 3 cut(s) 531, 1937, 2303
PflMI CCANNNNNTGG 1 cut(s) 1450
PfoI TCCNGGA 2 cut(s) 551, 976
PkrI GCNGC 2 cut(s) 1522, 2422
PleI GAGTC 4 cut(s) 296, 812, 932, 1877
PluTI GGCGCC 1 cut(s) 887
PpsI GAGTC 4 cut(s) 296, 812, 932, 1877
Ppu21I YACGTR 3 cut(s) 742, 843, 1292
PpuMI RGGWCCY 1 cut(s) 2159
Psp124BI GAGCTC 1 cut(s) 616
Psp5II RGGWCCY 1 cut(s) 2159
Psp6I CCWGG 5 cut(s) 551, 571, 976, 1331, 1701
PspFI CCCAGC 1 cut(s) 166
PspGI CCWGG 5 cut(s) 551, 571, 976, 1331, 1701
PspN4I GGNNCC 5 cut(s) 542, 885, 1201, 1700, 2161
PspPI GGNCC 3 cut(s) 360, 1585, 2159
PspPPI RGGWCCY 1 cut(s) 2159
PspXI VCTCGAGB 1 cut(s) 1857
PsuI RGATCY 2 cut(s) 1863, 1956
PvuII CAGCTG 1 cut(s) 537
RsaI GTAC 6 cut(s) 114, 218, 632, 769, 1235, 1474
RsaNI GTAC 6 cut(s) 113, 217, 631, 768, 1234, 1473
RseI CAYNNNNRTG 3 cut(s) 593, 803, 2465
SacI GAGCTC 1 cut(s) 616
SaqAI TTAA 6 cut(s) 6, 783, 1659, 1913, 2174, 2216
SatI GCNGC 2 cut(s) 1521, 2421
Sau96I GGNCC 3 cut(s) 360, 1585, 2159
SchI GAGTC 4 cut(s) 297, 812, 932, 1877
ScrFI CCNGG 8 cut(s) 183, 553, 573, 700, 701, 978, 1333, 1703
SduI GDGCHC 2 cut(s) 616, 718
SexAI ACCWGGT 1 cut(s) 1701
SfoI GGCGCC 1 cut(s) 885
Sfr274I CTCGAG 2 cut(s) 1857, 1885
SinI GGWCC 2 cut(s) 360, 2159
SlaI CTCGAG 2 cut(s) 1857, 1885
SmaI CCCGGG 1 cut(s) 701
SmiMI CAYNNNNRTG 3 cut(s) 593, 803, 2465
SmlI CTYRAG 5 cut(s) 1162, 1857, 1885, 2154, 2266
SmoI CTYRAG 5 cut(s) 1162, 1857, 1885, 2154, 2266
SphI GCATGC 1 cut(s) 1056
SspDI GGCGCC 1 cut(s) 883
SspMI CTAG 5 cut(s) 1112, 1592, 1920, 2114, 2403
SstI GAGCTC 1 cut(s) 616
StyD4I CCNGG 8 cut(s) 181, 551, 571, 698, 699, 976, 1331, 1701
StyI CCWWGG 2 cut(s) 859, 1119
TaaI ACNGT 5 cut(s) 241, 935, 1213, 2143, 2400
TaiI ACGT 4 cut(s) 744, 845, 1092, 1294
TaqI TCGA 5 cut(s) 482, 646, 1798, 1858, 1886
TatI WGTACW 4 cut(s) 112, 630, 767, 1472
TfiI GAWTC 3 cut(s) 531, 1937, 2303
Tru1I TTAA 6 cut(s) 6, 783, 1659, 1913, 2174, 2216
Tru9I TTAA 6 cut(s) 6, 783, 1659, 1913, 2174, 2216
TscAI CASTG 4 cut(s) 91, 421, 1581, 2146
TseFI GTSAC 5 cut(s) 899, 935, 993, 1107, 2043
TseI GCWGC 2 cut(s) 1520, 2420
Tsp45I GTSAC 5 cut(s) 899, 935, 993, 1107, 2043
TspMI CCCGGG 1 cut(s) 699
TspRI CASTG 4 cut(s) 91, 421, 1581, 2146
Van91I CCANNNNNTGG 1 cut(s) 1450
VpaK11BI GGWCC 2 cut(s) 360, 2159
XapI RAATTY 7 cut(s) 134, 210, 923, 1240, 1316, 1633, 1998
XceI RCATGY 2 cut(s) 389, 1056
XcmI CCANNNNNNNNNTGG 1 cut(s) 974
XhoI CTCGAG 2 cut(s) 1857, 1885
XmaI CCCGGG 1 cut(s) 699
XspI CTAG 5 cut(s) 1112, 1592, 1920, 2114, 2403
Zsp2I ATGCAT 2 cut(s) 1024, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.