Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000099

Physical Location & Seq

Genomic Coordinates Reverse (-)

3224458 .. 3228591

Gene Structure 4134 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28612

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2472 bp

ATGTCATATTTTTCTTCCCTCTCAATGGCCAATCAATCATTAACCGGCCCACAGCCCTCACAATATTCCTCATACAGAAAACTCACCATGAATTCTACTGAAGGATCTATGATCAGTAAATTCCTCATCCTCCTTCTCATACCCTGTTGTATTTCTCTCGACACTATTACACCAAACCAACCTCTAAAAGATGGCGACGTTCTTGTGTCAACCGGAAAAATCTTTGCACTTGGATTTTTCAGCCCCGGAAAGTCTCACAGCCGTTATGTTGGAGTTTGGTACTACCAAGTTCCTAACCAAACAATTGTGTGGGTTGCAAACAGAGATAATCCTGTCAATGGAAGCTCTGGTCTCCTAGCAATTCATGGAGACGGGGGCCTTGTGATCTATGGGAAAGACCAAAAGATTCCTATTTGGTCCTCTAATGTTACTCTCTCCTCTCCAAACAATTCTATGGCCAAGCTTTTGGAAACAGGAAATCTTGTATTGCTGGAGAATGAGGTAAGCCAAAATGTACTATGGGAAGGCTTTGATCATCCTTCAAATACTATGCTTCCATTTATGAAACTTGGGGTGAACAGGCAGTCTCGAATAGACTGGTTTTTGACATCTTGGAAGTCTCAAGATGACCCAGGAACCGGGAACTGTTCATATCGGATTGACTCAAGTGGATTTCCACAGCTGATTTTGTACAAGGATGGAGCTCCGTGGTGGCGAGCTGGAACTTGGACCGGCCTGAGATTGAGTGGCGTGCCTGTCTCATCACCTAATTTCATCTTCAATAGTTGTTTTGTGAACAATCAAGACGAGATATCCGTCATGTATGTTGTTAATAATGCCTCCTCAATCTTCACTAGGACCGTGCTAGATGAAACAGGAACCGTGGCACGGTCCACATGGAATGGTGAAGCACACGAATGGAACGTGTTTTGGTCAGCCCCAGTAGAGCGGTGTGATTACTATGGACGCTGTGGTCCAAATAATGGGTCCGGTGGGTGTATTCGGGGAAAAGGAGTATCCATGTGTGGAAATGGGGAAGGATTTGTGAAAATTGTACGAGTAAAGATACCAGAGTCGTCTATGGCAAGTGTAAACATCAATATGAGTTTGAAAGCGTGTGAACAAGAGTGCTTGAGAAATTGTTCTTGCACTGCATACTCGATTGCAGATGAGAACAAGGGAGGAATTGGATGCGTGACATGGCATGGAGATCTTATGGACATAAGGACTTTTTCAAATGCTGGCCAAGATTTATATGTTCGAGTTAATGCTACTGTCTTGGCTCAATATGCCAAGTCCAATGGTTCTCTTACCAAAAAGGCAAAGCTGGCAATTTCAATGGTCTCTGTCCTATTGTTCTTTCTTGTGGTTTTCCTTGTGTACTGGCTGGTGAAGAGGAAGTTGAAAGAAAAGAAAAGACCAAATATATTTGTATCAAGAGTTCCCAAAGGATCAATGTACTTCGAAAAGTCTACTGCAGATATTGATGATGAGAGTACAATAAACTCATCCGAATTACCATTTTTTGGAATAAGCATCATATCTGCAGCCACAAACAATTTCTCAGTGTCTAACAAGCTTGGAGCAGGCGGTTTTGGCTCCGTTTATAAGGGTGTGCTTTCTAATGGGAAGGAAGTAGCAGTGAAAAGATTGTCTAAGCATTCTGGCCAAGGAATTGAAGAGTTTAAGAATGAAGTTATGCTGATTGCAAAACTACAACACAGGAACCTTGTGAGGATTTTAGGCTGTTGTGTTCAAGATGAAGAGAAGATGCTAATCTATGAATATGTGCCAAACAAAAGTTTGGACTACTTCATTTTTAATTGGACCAGACGGTTTGAGATAATCTGTGGGATTGCTAGAGGGATATTATATCTTCATCAAGATTCAAGATTAAGAATCATCCATAGAGACTTAAAAGCCAGCAATGTTCTACTAGATGCTTCTATGAACCCCAAAATTGCAGATTTTGGTTTGGCTAGAATCTTTAGAGGAGATCAGAATGAATCAAAAACAAATCGTGTGGTTGGGACATATGGTTACATGTCACCAGAGTATGCAATGGAAGGATTGTTTTCAGTAAAGTCAGATGTATATAGCTTCGGCATTTTACTACTAGAAATCATTAGTGGTAGAAAGAACATTGGTTATTATGATGAAACATATCCCGACTCCAATTTAGTTGGCCATGTTTGGAATTTGTCGAGGGAAGATAATGCCTTGGAAATAGTTGATTCATCTCTGGGAGACTCATTGCAGTTTGATGAAGTTCTGAGATGTATACAAATTGCGCTCTTGTGTGTGCAAGATTTTCCCACCGAGCGACCAACCATGTCAGCAGTTCTTGTAATGTTAAGTAATGATGCAGCTCTTCCTCCGCCAGGAAAACCTGCATTTCTAGTGAAGAAAGCTGGTACCAGTGAAGAAAATTCTATCAATTATGTGACATGTACTATTGTAGGAGCTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin DUF3403 PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

823

Amino Acids

91.2

Weight (kDa)

8.24

Isoelectric Point (pI)

36.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	101 - 206	1.6e-33	D-mannose binding lectin
S_locus_glycop	PF00954	238 - 349	6.9e-20	S-locus glycoprotein domain
PAN_2	PF08276	342 - 408	1.5e-21	PAN-like domain
Pkinase	PF00069	522 - 780	4.3e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	523 - 781	3e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca	FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica	MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica	Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis	pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis	RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata	RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora	Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii	Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa	Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha	Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana	Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1608
AasI	GACNNNNNNGTC	1 cut(s)	972
Acc36I	ACCTGC	1 cut(s)	2398
Acc65I	GGTACC	1 cut(s)	2414
AccB1I	GGYRCC	1 cut(s)	2414
AccB7I	CCANNNNNTGG	2 cut(s)	983, 1526
AccBSI	CCGCTC	1 cut(s)	949
AccI	GTMKAC	2 cut(s)	1472, 2281
AciI	CCGC	3 cut(s)	949, 1590, 2378
AclWI	GGATC	2 cut(s)	112, 1459
AcoI	YGGCCR	5 cut(s)	27, 456, 1243, 1666, 2185
AcsI	RAATTY	4 cut(s)	91, 119, 2197, 2428
AcuI	CTGAAG	1 cut(s)	120
AfaI	GTAC	9 cut(s)	281, 516, 692, 1056, 1382, 1460, 1498, 2416, 2452
AfiI	CCNNNNNNNGG	7 cut(s)	25, 338, 638, 888, 983, 1526, 2381
AflIII	ACRYGT	3 cut(s)	924, 2043, 2447
AgsI	TTSAA	9 cut(s)	543, 781, 1111, 1236, 1338, 1405, 1679, 1757, 1890
AjnI	CCWGG	2 cut(s)	631, 2380
Alw21I	GWGCWC	2 cut(s)	706, 2467
Alw26I	GTCTC	9 cut(s)	258, 356, 363, 591, 624, 763, 1348, 1905, 2241
AlwI	GGATC	2 cut(s)	112, 1459
AoxI	GGCC	8 cut(s)	27, 46, 376, 456, 733, 1243, 1666, 2185
ApeKI	GCWGC	2 cut(s)	1547, 2366
ApoI	RAATTY	4 cut(s)	91, 119, 2197, 2428
ArsI	GACNNNNNNTTYG	2 cut(s)	971, 1003
Asp700I	GAANNNNTTC	1 cut(s)	1141
Asp718I	GGTACC	1 cut(s)	2414
AspLEI	GCGC	1 cut(s)	2293
AspS9I	GGNCC	9 cut(s)	47, 376, 417, 729, 858, 891, 974, 987, 1827
AsuC2I	CCSGG	2 cut(s)	246, 640
AsuHPI	GGTGA	6 cut(s)	76, 586, 756, 917, 1402, 2040
AsuII	TTCGAA	1 cut(s)	1464
AvaII	GGWCC	7 cut(s)	417, 729, 858, 891, 974, 987, 1827
BaeI	ACNNNNGTAYC	2 cut(s)	1058, 1091
BalI	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
BanI	GGYRCC	1 cut(s)	2414
BanII	GRGCYC	2 cut(s)	706, 2467
Bbv12I	GWGCWC	2 cut(s)	706, 2467
BbvI	GCAGC	2 cut(s)	1559, 2378
BccI	CCATC	2 cut(s)	185, 692
BceAI	ACGGC	1 cut(s)	246
BciT130I	CCWGG	2 cut(s)	633, 2382
BciVI	GTATCC	1 cut(s)	1027
BclI	TGATCA	2 cut(s)	111, 532
BcnI	CCSGG	2 cut(s)	246, 640
BcoDI	GTCTC	9 cut(s)	258, 356, 363, 591, 624, 763, 1348, 1905, 2241
BfaI	CTAG	8 cut(s)	356, 855, 866, 1860, 1937, 1980, 2117, 2399
BfmI	CTRYAG	2 cut(s)	1476, 1545
BfuAI	ACCTGC	1 cut(s)	2398
BfuI	GTATCC	1 cut(s)	1027
BglII	AGATCT	1 cut(s)	1210
BisI	GCNGC	2 cut(s)	1548, 2367
BlsI	GCNGC	2 cut(s)	1549, 2368
Bme1390I	CCNGG	4 cut(s)	246, 633, 640, 2382
Bme18I	GGWCC	7 cut(s)	417, 729, 858, 891, 974, 987, 1827
BmgT120I	GGNCC	9 cut(s)	47, 376, 417, 729, 858, 891, 974, 987, 1827
BmiI	GGNNCC	7 cut(s)	377, 637, 880, 988, 1600, 1727, 2416
BmrFI	CCNGG	4 cut(s)	246, 633, 640, 2382
BmrI	ACTGGG	1 cut(s)	935
BmsI	GCATC	5 cut(s)	1181, 1545, 1761, 1930, 2353
BmuI	ACTGGG	1 cut(s)	935
BpmI	CTGGAG	1 cut(s)	512
Bpu14I	TTCGAA	1 cut(s)	1464
BpuEI	CTTGAG	3 cut(s)	606, 649, 1153
BpuMI	CCSGG	2 cut(s)	246, 640
BsaBI	GATNNNNATC	1 cut(s)	1775
BsaI	GGTCTC	2 cut(s)	356, 1348
BsaJI	CCNNGG	6 cut(s)	244, 631, 707, 882, 1669, 2220
BsaWI	WCCGGW	2 cut(s)	212, 989
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 338, 638, 888, 983, 1526, 2381
Bse118I	RCCGGY	2 cut(s)	44, 731
Bse1I	ACTGG	4 cut(s)	602, 941, 1388, 2418
Bse3DI	GCAATG	3 cut(s)	1933, 2067, 2252
Bse8I	GATNNNNATC	1 cut(s)	1775
BseBI	CCWGG	2 cut(s)	633, 2382
BseDI	CCNNGG	6 cut(s)	244, 631, 707, 882, 1669, 2220
BseGI	GGATG	6 cut(s)	126, 535, 703, 1196, 1508, 1902
BseJI	GATNNNNATC	1 cut(s)	1775
BseLI	CCNNNNNNNGG	7 cut(s)	25, 338, 638, 888, 983, 1526, 2381
BseMI	GCAATG	3 cut(s)	1933, 2067, 2252
BseMII	CTCAG	3 cut(s)	728, 1578, 2264
BseNI	ACTGG	4 cut(s)	602, 941, 1388, 2418
BseRI	GAGGAG	3 cut(s)	427, 832, 2007
BseXI	GCAGC	2 cut(s)	1559, 2378
BshFI	GGCC	8 cut(s)	29, 48, 378, 458, 735, 1245, 1668, 2187
BshNI	GGYRCC	1 cut(s)	2414
BsiHKAI	GWGCWC	2 cut(s)	706, 2467
BsiSI	CCGG	6 cut(s)	45, 213, 246, 639, 732, 990
BslFI	GGGAC	1 cut(s)	2044
BslI	CCNNNNNNNGG	7 cut(s)	25, 338, 638, 888, 983, 1526, 2381
BsmAI	GTCTC	9 cut(s)	258, 356, 363, 591, 624, 763, 1348, 1905, 2241
BsmBI	CGTCTC	1 cut(s)	363
BsmFI	GGGAC	1 cut(s)	2044
BsmI	GAATGC	1 cut(s)	1660
BsnI	GGCC	8 cut(s)	29, 48, 378, 458, 735, 1245, 1668, 2187
Bso31I	GGTCTC	2 cut(s)	356, 1348
Bsp119I	TTCGAA	1 cut(s)	1464
Bsp1286I	GDGCHC	2 cut(s)	706, 2467
Bsp1407I	TGTACA	1 cut(s)	690
Bsp143I	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
BspACI	CCGC	3 cut(s)	949, 1590, 2378
BspANI	GGCC	8 cut(s)	29, 48, 378, 458, 735, 1245, 1668, 2187
BspCNI	CTCAG	3 cut(s)	729, 1577, 2265
BspLI	GGNNCC	7 cut(s)	377, 637, 880, 988, 1600, 1727, 2416
BspMAI	CTGCAG	2 cut(s)	1480, 1549
BspMI	ACCTGC	1 cut(s)	2398
BspPI	GGATC	2 cut(s)	112, 1459
BspQI	GCTCTTC	1 cut(s)	2376
BspT104I	TTCGAA	1 cut(s)	1464
BspT107I	GGYRCC	1 cut(s)	2414
BspTNI	GGTCTC	2 cut(s)	356, 1348
BsrBI	CCGCTC	1 cut(s)	949
BsrDI	GCAATG	3 cut(s)	1933, 2067, 2252
BsrFI	RCCGGY	2 cut(s)	44, 731
BsrGI	TGTACA	1 cut(s)	690
BsrI	ACTGG	4 cut(s)	602, 941, 1388, 2418
BssAI	RCCGGY	2 cut(s)	44, 731
BssECI	CCNNGG	6 cut(s)	244, 631, 707, 882, 1669, 2220
BssMI	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
BssNAI	GTATAC	1 cut(s)	2282
BssT1I	CCWWGG	2 cut(s)	1669, 2220
Bst1107I	GTATAC	1 cut(s)	2282
Bst2UI	CCWGG	2 cut(s)	633, 2382
Bst4CI	ACNGT	6 cut(s)	647, 862, 883, 891, 1276, 1836
Bst6I	CTCTTC	4 cut(s)	1388, 1674, 1758, 2376
BstAUI	TGTACA	1 cut(s)	690
BstBI	TTCGAA	1 cut(s)	1464
BstC8I	GCNNGC	6 cut(s)	717, 752, 1243, 1329, 1588, 1924
BstDEI	CTNAG	4 cut(s)	737, 1564, 1656, 2273
BstDSI	CCRYGG	2 cut(s)	707, 882
BstENI	CCTNNNNNAGG	1 cut(s)	2379
BstF5I	GGATG	6 cut(s)	126, 535, 703, 1196, 1508, 1902
BstHHI	GCGC	1 cut(s)	2293
BstKTI	GATC	7 cut(s)	107, 114, 387, 535, 1213, 1454, 1999
BstMAI	GTCTC	9 cut(s)	258, 356, 363, 591, 624, 763, 1348, 1905, 2241
BstMBI	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
BstMWI	GCNNNNNNNGC	3 cut(s)	1289, 1328, 1596
BstNI	CCWGG	2 cut(s)	633, 2382
BstNSI	RCATGY	2 cut(s)	2047, 2451
BstSCI	CCNGG	4 cut(s)	244, 631, 638, 2380
BstSFI	CTRYAG	2 cut(s)	1476, 1545
BstV1I	GCAGC	2 cut(s)	1559, 2378
BstX2I	RGATCY	2 cut(s)	104, 1210
BstXI	CCANNNNNNTGG	1 cut(s)	466
BstYI	RGATCY	2 cut(s)	104, 1210
BstZ17I	GTATAC	1 cut(s)	2282
BsuI	GTATCC	1 cut(s)	1027
BsuRI	GGCC	8 cut(s)	29, 48, 378, 458, 735, 1245, 1668, 2187
BtgI	CCRYGG	2 cut(s)	707, 882
BtsCI	GGATG	6 cut(s)	126, 535, 703, 1196, 1508, 1902
BtsI	GCAGTG	2 cut(s)	1149, 1647
BtsIMutI	CAGTG	4 cut(s)	1149, 1572, 1647, 2425
BveI	ACCTGC	1 cut(s)	2398
Cac8I	GCNNGC	6 cut(s)	717, 752, 1243, 1329, 1588, 1924
CfoI	GCGC	1 cut(s)	2293
Cfr10I	RCCGGY	2 cut(s)	44, 731
Cfr13I	GGNCC	9 cut(s)	47, 376, 417, 729, 858, 891, 974, 987, 1827
CseI	GACGC	1 cut(s)	975
Csp6I	GTAC	9 cut(s)	280, 515, 691, 1055, 1381, 1459, 1497, 2415, 2451
CspCI	CAANNNNNGTGG	2 cut(s)	2004, 2039
CviQI	GTAC	9 cut(s)	280, 515, 691, 1055, 1381, 1459, 1497, 2415, 2451
DdeI	CTNAG	4 cut(s)	737, 1564, 1656, 2273
DpnI	GATC	7 cut(s)	106, 113, 386, 534, 1212, 1453, 1998
DpnII	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
DrdI	GACNNNNNNGTC	1 cut(s)	972
DseDI	GACNNNNNNGTC	1 cut(s)	972
EaeI	YGGCCR	5 cut(s)	27, 456, 1243, 1666, 2185
Eam1104I	CTCTTC	4 cut(s)	1388, 1674, 1758, 2376
EarI	CTCTTC	4 cut(s)	1388, 1674, 1758, 2376
EciI	GGCGGA	1 cut(s)	2367
Ecl136II	GAGCTC	2 cut(s)	704, 2465
Eco130I	CCWWGG	2 cut(s)	1669, 2220
Eco24I	GRGCYC	2 cut(s)	706, 2467
Eco31I	GGTCTC	2 cut(s)	356, 1348
Eco32I	GATATC	1 cut(s)	813
Eco47I	GGWCC	7 cut(s)	417, 729, 858, 891, 974, 987, 1827
Eco53kI	GAGCTC	2 cut(s)	704, 2465
Eco57I	CTGAAG	1 cut(s)	120
EcoICRI	GAGCTC	2 cut(s)	704, 2465
EcoNI	CCTNNNNNAGG	1 cut(s)	2379
EcoO109I	RGGNCCY	1 cut(s)	376
EcoRI	GAATTC	1 cut(s)	91
EcoRII	CCWGG	2 cut(s)	631, 2380
EcoRV	GATATC	1 cut(s)	813
EcoT14I	CCWWGG	2 cut(s)	1669, 2220
EcoT38I	GRGCYC	2 cut(s)	706, 2467
ErhI	CCWWGG	2 cut(s)	1669, 2220
Esp3I	CGTCTC	1 cut(s)	363
FaqI	GGGAC	1 cut(s)	2044
FauNDI	CATATG	1 cut(s)	2035
FbaI	TGATCA	2 cut(s)	111, 532
FblI	GTMKAC	2 cut(s)	1472, 2281
Fnu4HI	GCNGC	2 cut(s)	1548, 2367
FokI	GGATG	6 cut(s)	113, 522, 710, 1203, 1495, 1889
FriOI	GRGCYC	2 cut(s)	706, 2467
Fsp4HI	GCNGC	2 cut(s)	1548, 2367
FspBI	CTAG	8 cut(s)	356, 855, 866, 1860, 1937, 1980, 2117, 2399
GlaI	GCGC	1 cut(s)	2292
GluI	GCNGC	2 cut(s)	1548, 2367
GsuI	CTGGAG	1 cut(s)	512
HaeIII	GGCC	8 cut(s)	29, 48, 378, 458, 735, 1245, 1668, 2187
HapII	CCGG	6 cut(s)	45, 213, 246, 639, 732, 990
HgaI	GACGC	1 cut(s)	975
HhaI	GCGC	1 cut(s)	2293
Hin6I	GCGC	1 cut(s)	2291
HinP1I	GCGC	1 cut(s)	2291
HincII	GTYRAC	1 cut(s)	210
HindII	GTYRAC	1 cut(s)	210
HindIII	AAGCTT	2 cut(s)	461, 1577
HpaII	CCGG	6 cut(s)	45, 213, 246, 639, 732, 990
HphI	GGTGA	6 cut(s)	76, 586, 756, 917, 1402, 2040
Hpy166II	GTNNAC	9 cut(s)	210, 577, 796, 894, 1093, 1121, 1381, 1473, 2282
Hpy188I	TCNGA	5 cut(s)	657, 1513, 2001, 2089, 2274
Hpy188III	TCNNGA	9 cut(s)	158, 588, 623, 803, 1437, 1757, 1883, 1890, 2168
Hpy8I	GTNNAC	9 cut(s)	210, 577, 796, 894, 1093, 1121, 1381, 1473, 2282
Hpy99I	CGWCG	1 cut(s)	200
HpyAV	CCTTC	7 cut(s)	95, 143, 518, 549, 1031, 1624, 2060
HpyCH4III	ACNGT	6 cut(s)	647, 862, 883, 891, 1276, 1836
HpyCH4IV	ACGT	2 cut(s)	198, 924
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1289, 1328, 1596
HpyF3I	CTNAG	4 cut(s)	737, 1564, 1656, 2273
HpySE526I	ACGT	2 cut(s)	198, 924
HspAI	GCGC	1 cut(s)	2291
KpnI	GGTACC	1 cut(s)	2418
Ksp22I	TGATCA	2 cut(s)	111, 532
Kzo9I	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
LguI	GCTCTTC	1 cut(s)	2376
LmnI	GCTCC	5 cut(s)	701, 709, 1583, 1604, 2462
Lsp1109I	GCAGC	2 cut(s)	1559, 2378
LweI	GCATC	5 cut(s)	1181, 1545, 1761, 1930, 2353
MaeI	CTAG	8 cut(s)	356, 855, 866, 1860, 1937, 1980, 2117, 2399
MaeII	ACGT	2 cut(s)	198, 924
MaeIII	GTNAC	5 cut(s)	427, 1195, 2039, 2046, 2443
MalI	GATC	7 cut(s)	106, 113, 386, 534, 1212, 1453, 1998
MbiI	CCGCTC	1 cut(s)	949
MboI	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
MfeI	CAATTG	1 cut(s)	303
MflI	RGATCY	2 cut(s)	104, 1210
MhlI	GDGCHC	2 cut(s)	706, 2467
MlsI	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
MluNI	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
MlyI	GAGTC	4 cut(s)	656, 1082, 2165, 2243
MmeI	TCCRAC	1 cut(s)	250
Mox20I	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
MroXI	GAANNNNTTC	1 cut(s)	1141
MscI	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
MseI	TTAA	8 cut(s)	41, 831, 1266, 1686, 1821, 1895, 1916, 2354
MslI	CAYNNNNRTG	2 cut(s)	916, 1100
Msp20I	TGGCCA	5 cut(s)	29, 458, 1245, 1668, 2187
MspA1I	CMGCKG	1 cut(s)	682
MspI	CCGG	6 cut(s)	45, 213, 246, 639, 732, 990
MspR9I	CCNGG	4 cut(s)	246, 633, 640, 2382
MunI	CAATTG	1 cut(s)	303
Mva1269I	GAATGC	1 cut(s)	1660
MvaI	CCWGG	2 cut(s)	633, 2382
MwoI	GCNNNNNNNGC	3 cut(s)	1289, 1328, 1596
NciI	CCSGG	2 cut(s)	246, 640
NdeI	CATATG	1 cut(s)	2035
NdeII	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
NlaIV	GGNNCC	7 cut(s)	377, 637, 880, 988, 1600, 1727, 2416
NmuCI	GTSAC	3 cut(s)	1195, 2046, 2443
NspI	RCATGY	2 cut(s)	2047, 2451
NspV	TTCGAA	1 cut(s)	1464
PciI	ACATGT	2 cut(s)	2043, 2447
PciSI	GCTCTTC	1 cut(s)	2376
PcsI	WCGNNNNNNNCGW	2 cut(s)	813, 921
PctI	GAATGC	1 cut(s)	1660
PdmI	GAANNNNTTC	1 cut(s)	1141
PfeI	GAWTC	6 cut(s)	406, 1886, 1899, 1983, 2006, 2234
PflMI	CCANNNNNTGG	2 cut(s)	983, 1526
PkrI	GCNGC	2 cut(s)	1549, 2368
PleI	GAGTC	4 cut(s)	656, 1081, 2165, 2243
PpsI	GAGTC	4 cut(s)	656, 1081, 2165, 2243
PscI	ACATGT	2 cut(s)	2043, 2447
PsiI	TTATAA	1 cut(s)	1608
Psp124BI	GAGCTC	2 cut(s)	706, 2467
Psp6I	CCWGG	2 cut(s)	631, 2380
PspGI	CCWGG	2 cut(s)	631, 2380
PspN4I	GGNNCC	7 cut(s)	377, 637, 880, 988, 1600, 1727, 2416
PspPI	GGNCC	9 cut(s)	47, 376, 417, 729, 858, 891, 974, 987, 1827
PsrI	GAACNNNNNNTAC	2 cut(s)	1425, 1457
PstI	CTGCAG	2 cut(s)	1480, 1549
PsuI	RGATCY	2 cut(s)	104, 1210
PvuII	CAGCTG	1 cut(s)	682
RsaI	GTAC	9 cut(s)	281, 516, 692, 1056, 1382, 1460, 1498, 2416, 2452
RsaNI	GTAC	9 cut(s)	280, 515, 691, 1055, 1381, 1459, 1497, 2415, 2451
RseI	CAYNNNNRTG	2 cut(s)	916, 1100
SacI	GAGCTC	2 cut(s)	706, 2467
SapI	GCTCTTC	1 cut(s)	2376
SaqAI	TTAA	8 cut(s)	41, 831, 1266, 1686, 1821, 1895, 1916, 2354
SatI	GCNGC	2 cut(s)	1548, 2367
Sau3AI	GATC	7 cut(s)	104, 111, 384, 532, 1210, 1451, 1996
Sau96I	GGNCC	9 cut(s)	47, 376, 417, 729, 858, 891, 974, 987, 1827
SchI	GAGTC	4 cut(s)	656, 1082, 2165, 2243
ScrFI	CCNGG	4 cut(s)	246, 633, 640, 2382
SduI	GDGCHC	2 cut(s)	706, 2467
SfaNI	GCATC	5 cut(s)	1181, 1545, 1761, 1930, 2353
SfcI	CTRYAG	2 cut(s)	1476, 1545
SfuI	TTCGAA	1 cut(s)	1464
SinI	GGWCC	7 cut(s)	417, 729, 858, 891, 974, 987, 1827
SmiMI	CAYNNNNRTG	2 cut(s)	916, 1100
SmlI	CTYRAG	3 cut(s)	621, 664, 1132
SmoI	CTYRAG	3 cut(s)	621, 664, 1132
SsiI	CCGC	3 cut(s)	949, 1590, 2378
SspI	AATATT	1 cut(s)	65
SspMI	CTAG	8 cut(s)	356, 855, 866, 1860, 1937, 1980, 2117, 2399
SstI	GAGCTC	2 cut(s)	706, 2467
StyD4I	CCNGG	4 cut(s)	244, 631, 638, 2380
StyI	CCWWGG	2 cut(s)	1669, 2220
TaaI	ACNGT	6 cut(s)	647, 862, 883, 891, 1276, 1836
TaiI	ACGT	2 cut(s)	201, 927
TaqI	TCGA	6 cut(s)	159, 589, 1160, 1261, 1464, 2204
TatI	WGTACW	6 cut(s)	514, 690, 1380, 1458, 1496, 2450
TfiI	GAWTC	6 cut(s)	406, 1886, 1899, 1983, 2006, 2234
Tru1I	TTAA	8 cut(s)	41, 831, 1266, 1686, 1821, 1895, 1916, 2354
Tru9I	TTAA	8 cut(s)	41, 831, 1266, 1686, 1821, 1895, 1916, 2354
TscAI	CASTG	4 cut(s)	1156, 1572, 1647, 2425
TseFI	GTSAC	3 cut(s)	1195, 2046, 2443
TseI	GCWGC	2 cut(s)	1547, 2366
Tsp45I	GTSAC	3 cut(s)	1195, 2046, 2443
TspGWI	ACGGA	3 cut(s)	696, 805, 1591
TspRI	CASTG	4 cut(s)	1156, 1572, 1647, 2425
Van91I	CCANNNNNTGG	2 cut(s)	983, 1526
VpaK11BI	GGWCC	7 cut(s)	417, 729, 858, 891, 974, 987, 1827
XagI	CCTNNNNNAGG	1 cut(s)	2379
XapI	RAATTY	4 cut(s)	91, 119, 2197, 2428
XceI	RCATGY	2 cut(s)	2047, 2451
XmiI	GTMKAC	2 cut(s)	1472, 2281
XmnI	GAANNNNTTC	1 cut(s)	1141
XspI	CTAG	8 cut(s)	356, 855, 866, 1860, 1937, 1980, 2117, 2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.