RchiOBHm_Chr5g0004941

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Reverse (-)
3264310 .. 3268014
3705 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28617

Sequence Viewer

Length: 2400 bp
ATGAGTTTCAGTAGCGAAGCGTTTATCCAGATATTGCTCATCTTTCTCCTTCTCCCCTCTAGCATCTGCCAACTTCCCCTTGACACCCTTACGCCAAACCAACCCATCAGAGACGGCGACGTTTTAGTCTCTAGCAGGAAACTCTTTGCACTAGGGTTCTTCAGCCCCGGAAATCCTCAGCACCGCCACGTTGGAGTTTGGTTTTACAAAGTTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAAACCACCCAGTCAATGATTCCTCTGGAGTGCTATCGATCAGTGGTGATGGAGGCCTTGTCATACACGGAAAGGACCAAAGTACCCCTCTTTGGTCCGCAAACGTTACTCTCTCTTCTCCAAACAATTTCACAGCCAAGCTTCGGGATACAGGAAATCTTGTTTTACTTGAGAATGGAAACCAAAGAGTTGTGTGGGATAGCTTTGATTACCCCTCAGATACAGTGCTTTCCTCTATGAAGCTTGGGCTGGACCGGCGGTCCGGGTTGGAGTGGCTCATAACGTCTTGGAAGTCAAAAGATGACCCGGGAACCGGGAGCTGTACATATGGGATAGACCCGAGGGGGTCTCCGCAGTTGTTTCTGAAAAAGGAGGGAGGCCCATTGTGGCGGAGCGGCCCTTGGATCGGGGACAGATGGAGCGGTGAACCCCAACTAAGCAGTACCGTTGGACTCTTCAATTTAAGTTTTGTCAACAATGAAGACGAGATATCCTACAAGCGTGTTGTTGCAAATGACTCATTGTTCACAAGGGGGGTGCTAGATGAATCAGGAATATATCAACGGCTCATGTGGAATGATAAGGAAAACAAATGGATCGAATTGGTCTCCGACCCGAATGAGTGGTGTGATAACTATGGACTCTGTGGTCCAAATAGTAACTGTGACCCATACAATGACTATAAGTTTGCTTGCACTTGCCAACCCGGCTTCGAACCCAAATCGCCTAGTGACTGGTACTTGAGAATTGGCGTGGGTGGGTGCATTAGGAAAGCAGGAGTGTCTGTGTGTCGGAACGGAGAAGGGTTCGTGCCGGTGAATCGTGTAAAGGTACCGGACTCATCTACGGCAGTACGTGTGAATATGAGTTTGAGTTTGGAAGCTTGTAAGCTAGAGTGCTTGATGGATTGTTCTTGCACGGCTTACACGAGTGCAGATGAGCGGGGAGGTGGAAATGGGTGCTTGACATGGCACGGGGACTTGATGGACACGAGGACTTACCCCAAAGTTGGTCAAGATTTATATGTTCGAGTTGATGCAACTTCTCTAGGCAATCGTAGACGAAATAAATGTTCATTTATACTTACGGCCGGGTCAACCTACTTCGAAGAATCTTCTGGTGGAACAGCTTTTGATGATAGTAGAATAAACTCAGAGTTAGCATTCTTTCATCTAAAAACCATAACAACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGTTTTGGCTCCGTTTATAAGGGCATACTTCACAATGGAAAGGAAATAGCAGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAATTCTTCTGATTGCAAAACTCCAGCACAGAAACCTTGTCAGGATTTTAGGTTGTTGTGTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAAGAGAGCACTTTTAAATTGGACAAAACGTTTCGAGATTATCTTTGGGATTGCTAGAGGGATATTATATCTTCATGAAGATTCGAGATTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTCCTATTGGATAATTCTTTGAACCCAAAAATTGCAGATTTTGGTATGGCTAGAATATTTAGTGGGGAGCAAAGTGAAGCGAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCCCCGGAATATGCAATGGAAGGACTGTTTTCAATCAAGTCTGATGTATATAGTTTTGGTGTTTTACTGCTAGAAATCATCACTGGCAAAAAGAATGTTGGCTATTACCATGAGGAGTATCCTAATTCAAATTTGGTTGGACATGTTTGGGACTTGTGGAAAGAAGGCAGAGCTGTGGAAATCTTTGATTCATCTATAGAAGAATACCTTGTTAGTGAAGTTGTAAGGTGCATTCAAATCGGGCTTTTGTGCGTGCAAGAATATGCAACAGACCGACCAACCATGTCAGCAGTTGTTTCCATGTTAGGTAATGATGCAGCTCTTCCTTCACCAAGACGACCCGCATTTTTACTAAAGAGAATGACTCCTAGTGGAGAACCATCCAGCGGTGAAGGAGCTAATTCAGTAAATGATGTCACATGTACAATTGTAGAAGGTCGCTAA

Protein Analysis

799

Amino Acids

88.9

Weight (kDa)

5.73

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 2.1e-33 D-mannose binding lectin
S_locus_glycop PF00954 211 - 323 5.3e-24 S-locus glycoprotein domain
PAN_2 PF08276 345 - 412 1.4e-19 PAN-like domain
PK_Tyr_Ser-Thr PF07714 484 - 753 2e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 484 - 687 5.1e-44 Protein kinase domain
DUF3403 PF11883 756 - 799 1.4e-06 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1494
AasI GACNNNNNNGTC 2 cut(s) 125, 891
Acc65I GGTACC 1 cut(s) 1075
AccB1I GGYRCC 1 cut(s) 1075
AccB7I CCANNNNNTGG 1 cut(s) 231
AccBSI CCGCTC 3 cut(s) 639, 666, 1186
AccI GTMKAC 1 cut(s) 1303
AclI AACGTT 2 cut(s) 348, 1744
AclWI GGATC 2 cut(s) 656, 848
AcoI YGGCCR 2 cut(s) 1332, 1552
AcsI RAATTY 2 cut(s) 1581, 2086
AcuI CTGAAG 1 cut(s) 145
AfaI GTAC 7 cut(s) 328, 568, 688, 983, 1077, 1098, 2380
AfiI CCNNNNNNNGG 7 cut(s) 231, 336, 387, 557, 650, 1253, 2342
AflIII ACRYGT 3 cut(s) 1099, 2098, 2375
AgsI TTSAA 8 cut(s) 703, 1457, 1565, 1643, 1861, 1989, 2085, 2192
AhdI GACNNNNNGTC 1 cut(s) 502
AjuI GAANNNNNNNTTGG 4 cut(s) 1449, 1464, 1481, 1496
Alw21I GWGCWC 1 cut(s) 1726
Alw26I GTCTC 4 cut(s) 105, 133, 597, 856
AlwI GGATC 2 cut(s) 656, 848
Ama87I CYCGRG 2 cut(s) 550, 583
AoxI GGCC 6 cut(s) 298, 622, 640, 1332, 1552, 1830
ApeKI GCWGC 1 cut(s) 2273
ApoI RAATTY 2 cut(s) 1581, 2086
ArsI GACNNNNNNTTYG 2 cut(s) 914, 946
Asp700I GAANNNNTTC 1 cut(s) 1584
Asp718I GGTACC 1 cut(s) 1075
AspS9I GGNCC 7 cut(s) 319, 339, 496, 504, 623, 641, 893
AsuC2I CCSGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
AsuHPI GGTGA 5 cut(s) 302, 680, 1072, 2277, 2357
AsuII TTCGAA 2 cut(s) 957, 1350
AvaI CYCGRG 2 cut(s) 550, 583
AvaII GGWCC 5 cut(s) 319, 339, 496, 504, 893
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BalI TGGCCA 1 cut(s) 1554
BanI GGYRCC 1 cut(s) 1075
BauI CACGAG 2 cut(s) 1171, 1234
BbsI GAAGAC 1 cut(s) 732
Bbv12I GWGCWC 1 cut(s) 1726
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 1 cut(s) 2285
BccI CCATC 6 cut(s) 113, 287, 654, 1141, 1222, 2344
BceAI ACGGC 5 cut(s) 130, 824, 1107, 1179, 1347
BcgI CGANNNNNNTGC 2 cut(s) 2176, 2210
BciVI GTATCC 2 cut(s) 385, 2085
BcnI CCSGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
BcoDI GTCTC 4 cut(s) 105, 133, 597, 856
BfmI CTRYAG 1 cut(s) 2151
BfuI GTATCC 2 cut(s) 385, 2085
BglI GCCNNNNNGGC 1 cut(s) 951
BglII AGATCT 1 cut(s) 1822
BisI GCNGC 2 cut(s) 640, 2274
BlsI GCNGC 2 cut(s) 641, 2275
Bme1390I CCNGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
Bme18I GGWCC 5 cut(s) 319, 339, 496, 504, 893
BmeRI GACNNNNNGTC 1 cut(s) 502
BmeT110I CYCGRG 2 cut(s) 550, 583
BmgT120I GGNCC 7 cut(s) 319, 339, 496, 504, 623, 641, 893
BmiI GGNNCC 3 cut(s) 556, 1077, 1486
BmrFI CCNGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 3 cut(s) 72, 1270, 2260
BmuI ACTGGG 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 732
BplI GAGNNNNNCTC 4 cut(s) 577, 609, 2305, 2337
BpmI CTGGAG 2 cut(s) 291, 1586
Bpu10I CCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 2 cut(s) 957, 1350
BpuEI CTTGAG 2 cut(s) 434, 1006
BpuMI CCSGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
Bsa29I ATCGAT 1 cut(s) 281
BsaAI YACGTR 1 cut(s) 1100
BsaBI GATNNNNATC 1 cut(s) 1661
BsaI GGTCTC 2 cut(s) 597, 856
BsaJI CCNNGG 6 cut(s) 166, 550, 584, 644, 1555, 1959
BsaWI WCCGGW 1 cut(s) 1078
BsaXI ACNNNNNCTCC 6 cut(s) 288, 318, 1014, 1044, 1433, 1463
Bsc4I CCNNNNNNNGG 7 cut(s) 231, 336, 387, 557, 650, 1253, 2342
Bse118I RCCGGY 2 cut(s) 498, 1057
Bse1I ACTGG 3 cut(s) 254, 983, 2044
Bse3DI GCAATG 2 cut(s) 1843, 1977
Bse8I GATNNNNATC 1 cut(s) 1661
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 6 cut(s) 166, 550, 584, 644, 1555, 1959
BseGI GGATG 1 cut(s) 2336
BseJI GATNNNNATC 1 cut(s) 1661
BseLI CCNNNNNNNGG 7 cut(s) 231, 336, 387, 557, 650, 1253, 2342
BseMI GCAATG 2 cut(s) 1843, 1977
BseMII CTCAG 3 cut(s) 191, 474, 1410
BseNI ACTGG 3 cut(s) 254, 983, 2044
BseRI GAGGAG 1 cut(s) 2084
BseX3I CGGCCG 1 cut(s) 1332
BseXI GCAGC 1 cut(s) 2285
BsgI GTGCAG 1 cut(s) 1197
Bsh1285I CGRYCG 1 cut(s) 1335
BshFI GGCC 6 cut(s) 300, 624, 642, 1334, 1554, 1832
BshNI GGYRCC 1 cut(s) 1075
BshVI ATCGAT 1 cut(s) 281
BsiEI CGRYCG 1 cut(s) 1335
BsiHKAI GWGCWC 1 cut(s) 1726
BsiHKCI CYCGRG 2 cut(s) 550, 583
BslFI GGGAC 4 cut(s) 668, 1235, 1942, 2120
BslI CCNNNNNNNGG 7 cut(s) 231, 336, 387, 557, 650, 1253, 2342
BsmAI GTCTC 4 cut(s) 105, 133, 597, 856
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 4 cut(s) 668, 1235, 1942, 2120
BsmI GAATGC 2 cut(s) 1406, 2187
BsnI GGCC 6 cut(s) 300, 624, 642, 1334, 1554, 1832
Bso31I GGTCTC 2 cut(s) 597, 856
BsoBI CYCGRG 2 cut(s) 550, 583
Bsp119I TTCGAA 2 cut(s) 957, 1350
Bsp1286I GDGCHC 1 cut(s) 1726
Bsp1407I TGTACA 2 cut(s) 566, 2378
Bsp143I GATC 4 cut(s) 282, 648, 840, 1822
BspANI GGCC 6 cut(s) 300, 624, 642, 1334, 1554, 1832
BspCNI CTCAG 3 cut(s) 190, 473, 1409
BspDI ATCGAT 1 cut(s) 281
BspHI TCATGA 1 cut(s) 1789
BspLI GGNNCC 3 cut(s) 556, 1077, 1486
BspPI GGATC 2 cut(s) 656, 848
BspQI GCTCTTC 1 cut(s) 2283
BspT104I TTCGAA 2 cut(s) 957, 1350
BspT107I GGYRCC 1 cut(s) 1075
BspTNI GGTCTC 2 cut(s) 597, 856
BsrBI CCGCTC 3 cut(s) 639, 666, 1186
BsrDI GCAATG 2 cut(s) 1843, 1977
BsrFI RCCGGY 2 cut(s) 498, 1057
BsrGI TGTACA 2 cut(s) 566, 2378
BsrI ACTGG 3 cut(s) 254, 983, 2044
BssAI RCCGGY 2 cut(s) 498, 1057
BssECI CCNNGG 6 cut(s) 166, 550, 584, 644, 1555, 1959
BssMI GATC 4 cut(s) 282, 648, 840, 1822
BssSI CACGAG 2 cut(s) 1171, 1234
BssT1I CCWWGG 2 cut(s) 644, 1555
Bst2BI CACGAG 2 cut(s) 1171, 1234
Bst4CI ACNGT 4 cut(s) 469, 691, 908, 1983
Bst6I CTCTTC 5 cut(s) 364, 704, 1560, 1644, 2283
BstAUI TGTACA 2 cut(s) 566, 2378
BstBAI YACGTR 1 cut(s) 1100
BstBI TTCGAA 2 cut(s) 957, 1350
BstC8I GCNNGC 3 cut(s) 937, 1834, 2210
BstDEI CTNAG 4 cut(s) 177, 460, 680, 1396
BstF5I GGATG 1 cut(s) 2336
BstKTI GATC 4 cut(s) 285, 651, 843, 1825
BstMAI GTCTC 4 cut(s) 105, 133, 597, 856
BstMBI GATC 4 cut(s) 282, 648, 840, 1822
BstMCI CGRYCG 1 cut(s) 1335
BstMWI GCNNNNNNNGC 2 cut(s) 499, 951
BstNSI RCATGY 2 cut(s) 2102, 2379
BstSCI CCNGG 8 cut(s) 166, 506, 549, 550, 557, 949, 1334, 1959
BstSFI CTRYAG 1 cut(s) 2151
BstV1I GCAGC 1 cut(s) 2285
BstV2I GAAGAC 1 cut(s) 732
BstX2I RGATCY 1 cut(s) 1822
BstXI CCANNNNNNTGG 1 cut(s) 1933
BstYI RGATCY 1 cut(s) 1822
BstZI CGGCCG 1 cut(s) 1332
Bsu15I ATCGAT 1 cut(s) 281
BsuI GTATCC 2 cut(s) 385, 2085
BsuRI GGCC 6 cut(s) 300, 624, 642, 1334, 1554, 1832
BsuTUI ATCGAT 1 cut(s) 281
BtsCI GGATG 1 cut(s) 2336
BtsIMutI CAGTG 3 cut(s) 292, 474, 2037
Cac8I GCNNGC 3 cut(s) 937, 1834, 2210
CciI TCATGA 1 cut(s) 1789
Cfr10I RCCGGY 2 cut(s) 498, 1057
Cfr13I GGNCC 7 cut(s) 319, 339, 496, 504, 623, 641, 893
Cfr9I CCCGGG 1 cut(s) 550
ClaI ATCGAT 1 cut(s) 281
CpoI CGGWCCG 1 cut(s) 504
Csp6I GTAC 7 cut(s) 327, 567, 687, 982, 1076, 1097, 2379
CspI CGGWCCG 1 cut(s) 504
CviAII CATG 8 cut(s) 814, 1212, 1790, 2066, 2099, 2239, 2257, 2376
CviQI GTAC 7 cut(s) 327, 567, 687, 982, 1076, 1097, 2379
DdeI CTNAG 4 cut(s) 177, 460, 680, 1396
DpnI GATC 4 cut(s) 284, 650, 842, 1824
DpnII GATC 4 cut(s) 282, 648, 840, 1822
DraI TTTAAA 1 cut(s) 1731
DrdI GACNNNNNNGTC 2 cut(s) 125, 891
DriI GACNNNNNGTC 1 cut(s) 502
DseDI GACNNNNNNGTC 2 cut(s) 125, 891
EaeI YGGCCR 2 cut(s) 1332, 1552
EagI CGGCCG 1 cut(s) 1332
Eam1104I CTCTTC 5 cut(s) 364, 704, 1560, 1644, 2283
Eam1105I GACNNNNNGTC 1 cut(s) 502
EarI CTCTTC 5 cut(s) 364, 704, 1560, 1644, 2283
EciI GGCGGA 1 cut(s) 649
EclXI CGGCCG 1 cut(s) 1332
Eco130I CCWWGG 2 cut(s) 644, 1555
Eco147I AGGCCT 1 cut(s) 300
Eco31I GGTCTC 2 cut(s) 597, 856
Eco32I GATATC 1 cut(s) 735
Eco47I GGWCC 5 cut(s) 319, 339, 496, 504, 893
Eco52I CGGCCG 1 cut(s) 1332
Eco57I CTGAAG 1 cut(s) 145
Eco88I CYCGRG 2 cut(s) 550, 583
EcoRV GATATC 1 cut(s) 735
EcoT14I CCWWGG 2 cut(s) 644, 1555
ErhI CCWWGG 2 cut(s) 644, 1555
Esp3I CGTCTC 1 cut(s) 105
FaeI CATG 8 cut(s) 817, 1215, 1793, 2069, 2102, 2242, 2260, 2379
FalI AAGNNNNNCTT 2 cut(s) 2148, 2180
FaqI GGGAC 4 cut(s) 668, 1235, 1942, 2120
FatI CATG 8 cut(s) 813, 1211, 1789, 2065, 2098, 2238, 2256, 2375
FauI CCCGC 2 cut(s) 1179, 2305
FauNDI CATATG 2 cut(s) 571, 1945
FblI GTMKAC 1 cut(s) 1303
Fnu4HI GCNGC 2 cut(s) 640, 2274
FokI GGATG 1 cut(s) 2323
Fsp4HI GCNGC 2 cut(s) 640, 2274
GluI GCNGC 2 cut(s) 640, 2274
GsuI CTGGAG 2 cut(s) 291, 1586
HaeIII GGCC 6 cut(s) 300, 624, 642, 1334, 1554, 1832
Hin1II CATG 8 cut(s) 817, 1215, 1793, 2069, 2102, 2242, 2260, 2379
HincII GTYRAC 2 cut(s) 718, 1341
HindII GTYRAC 2 cut(s) 718, 1341
HindIII AAGCTT 4 cut(s) 383, 485, 1125, 1463
HphI GGTGA 5 cut(s) 302, 680, 1072, 2277, 2357
Hpy166II GTNNAC 5 cut(s) 671, 718, 771, 1304, 1341
Hpy188I TCNGA 8 cut(s) 110, 463, 609, 856, 1038, 1399, 1590, 1999
Hpy8I GTNNAC 5 cut(s) 671, 718, 771, 1304, 1341
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 8 cut(s) 59, 1040, 1466, 1970, 2114, 2292, 2342, 2384
HpyCH4III ACNGT 4 cut(s) 469, 691, 908, 1983
HpyCH4IV ACGT 6 cut(s) 120, 189, 348, 527, 1099, 1744
HpyF10VI GCNNNNNNNGC 2 cut(s) 499, 951
HpyF3I CTNAG 4 cut(s) 177, 460, 680, 1396
HpySE526I ACGT 6 cut(s) 120, 189, 348, 527, 1099, 1744
Hsp92II CATG 8 cut(s) 817, 1215, 1793, 2069, 2102, 2242, 2260, 2379
KpnI GGTACC 1 cut(s) 1079
Kzo9I GATC 4 cut(s) 282, 648, 840, 1822
LguI GCTCTTC 1 cut(s) 2283
LmnI GCTCC 6 cut(s) 561, 636, 663, 1490, 1906, 2351
Lsp1109I GCAGC 1 cut(s) 2285
LweI GCATC 3 cut(s) 72, 1270, 2260
MaeII ACGT 6 cut(s) 120, 189, 348, 527, 1099, 1744
MaeIII GTNAC 5 cut(s) 349, 902, 908, 974, 2371
MalI GATC 4 cut(s) 284, 650, 842, 1824
MbiI CCGCTC 3 cut(s) 639, 666, 1186
MboI GATC 4 cut(s) 282, 648, 840, 1822
MfeI CAATTG 1 cut(s) 2382
MflI RGATCY 1 cut(s) 1822
MhlI GDGCHC 1 cut(s) 1726
MlsI TGGCCA 1 cut(s) 1554
MluNI TGGCCA 1 cut(s) 1554
MlyI GAGTC 6 cut(s) 690, 755, 879, 1076, 1688, 2314
MmeI TCCRAC 7 cut(s) 172, 492, 673, 879, 1016, 1918, 2074
Mox20I TGGCCA 1 cut(s) 1554
MroXI GAANNNNTTC 1 cut(s) 1584
MscI TGGCCA 1 cut(s) 1554
MseI TTAA 5 cut(s) 707, 1572, 1707, 1730, 1805
Msp20I TGGCCA 1 cut(s) 1554
MspA1I CMGCKG 1 cut(s) 2343
MspR9I CCNGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
MunI CAATTG 1 cut(s) 2382
Mva1269I GAATGC 2 cut(s) 1406, 2187
MwoI GCNNNNNNNGC 2 cut(s) 499, 951
NciI CCSGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
NdeI CATATG 2 cut(s) 571, 1945
NdeII GATC 4 cut(s) 282, 648, 840, 1822
NlaIII CATG 8 cut(s) 817, 1215, 1793, 2069, 2102, 2242, 2260, 2379
NlaIV GGNNCC 3 cut(s) 556, 1077, 1486
NmuCI GTSAC 3 cut(s) 908, 974, 2371
NspI RCATGY 2 cut(s) 2102, 2379
NspV TTCGAA 2 cut(s) 957, 1350
PagI TCATGA 1 cut(s) 1789
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 2 cut(s) 2098, 2375
PciSI GCTCTTC 1 cut(s) 2283
PcsI WCGNNNNNNNCGW 1 cut(s) 1169
PctI GAATGC 2 cut(s) 1406, 2187
PdmI GAANNNNTTC 1 cut(s) 1584
PfeI GAWTC 7 cut(s) 263, 791, 1063, 1355, 1657, 1796, 2144
PflMI CCANNNNNTGG 1 cut(s) 231
PkrI GCNGC 2 cut(s) 641, 2275
PleI GAGTC 6 cut(s) 690, 755, 879, 1076, 1688, 2314
PpsI GAGTC 6 cut(s) 690, 755, 879, 1076, 1688, 2314
Ppu21I YACGTR 1 cut(s) 1100
PscI ACATGT 2 cut(s) 2098, 2375
PsiI TTATAA 1 cut(s) 1494
Psp1406I AACGTT 2 cut(s) 348, 1744
PspN4I GGNNCC 3 cut(s) 556, 1077, 1486
PspPI GGNCC 7 cut(s) 319, 339, 496, 504, 623, 641, 893
PsuI RGATCY 1 cut(s) 1822
RsaI GTAC 7 cut(s) 328, 568, 688, 983, 1077, 1098, 2380
RsaNI GTAC 7 cut(s) 327, 567, 687, 982, 1076, 1097, 2379
Rsr2I CGGWCCG 1 cut(s) 504
RsrII CGGWCCG 1 cut(s) 504
SapI GCTCTTC 1 cut(s) 2283
SaqAI TTAA 5 cut(s) 707, 1572, 1707, 1730, 1805
SatI GCNGC 2 cut(s) 640, 2274
Sau3AI GATC 4 cut(s) 282, 648, 840, 1822
Sau96I GGNCC 7 cut(s) 319, 339, 496, 504, 623, 641, 893
SchI GAGTC 6 cut(s) 690, 755, 879, 1076, 1688, 2314
ScrFI CCNGG 8 cut(s) 168, 508, 551, 552, 559, 951, 1336, 1961
SduI GDGCHC 1 cut(s) 1726
SfaNI GCATC 3 cut(s) 72, 1270, 2260
SfcI CTRYAG 1 cut(s) 2151
SfuI TTCGAA 2 cut(s) 957, 1350
SinI GGWCC 5 cut(s) 319, 339, 496, 504, 893
SmaI CCCGGG 1 cut(s) 552
SmlI CTYRAG 2 cut(s) 413, 985
SmoI CTYRAG 2 cut(s) 413, 985
SseBI AGGCCT 1 cut(s) 300
SspI AATATT 1 cut(s) 1896
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 8 cut(s) 166, 506, 549, 550, 557, 949, 1334, 1959
StyI CCWWGG 2 cut(s) 644, 1555
TaaI ACNGT 4 cut(s) 469, 691, 908, 1983
TaiI ACGT 6 cut(s) 123, 192, 351, 530, 1102, 1747
TaqI TCGA 7 cut(s) 281, 843, 957, 1273, 1350, 1749, 1799
TaqII GACCGA 1 cut(s) 2244
TatI WGTACW 2 cut(s) 566, 2378
TauI GCSGC 1 cut(s) 642
TfiI GAWTC 7 cut(s) 263, 791, 1063, 1355, 1657, 1796, 2144
Tru1I TTAA 5 cut(s) 707, 1572, 1707, 1730, 1805
Tru9I TTAA 5 cut(s) 707, 1572, 1707, 1730, 1805
TscAI CASTG 3 cut(s) 292, 474, 2044
TseFI GTSAC 3 cut(s) 908, 974, 2371
TseI GCWGC 1 cut(s) 2273
Tsp45I GTSAC 3 cut(s) 908, 974, 2371
TspGWI ACGGA 3 cut(s) 327, 1056, 1477
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 3 cut(s) 292, 474, 2044
Van91I CCANNNNNTGG 1 cut(s) 231
VpaK11BI GGWCC 5 cut(s) 319, 339, 496, 504, 893
XapI RAATTY 2 cut(s) 1581, 2086
XceI RCATGY 2 cut(s) 2102, 2379
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 1 cut(s) 1303
XmnI GAANNNNTTC 1 cut(s) 1584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.