pycom10g26030

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
27465349 .. 27465859
511 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g26030.1

Sequence Viewer

Length: 468 bp
ATGGGACAATGCGGTCCAAACAGCAACTGCGACCCTACCAATGCCCATGAGTTTGAGTGCACGTGCCTACCCGTGTTCGAACCGAAGTTGCAAAATGAATGGAACTTGAGAGATGGGTCGGGAGGGTGTGTAAGGAGAAAAGGAGTGCCCGTTTGCCAAAATGGGCAACGGTTTGTCAAGGTGGCACGTGTGAAGGTGCCGAATGCTTCTACGGCACGTGTGAACATAAGTATGAGCTTGAAAGAGTGTGAAGAAGAGTGTTTGAGGAAATGTTCTTGCATGGCATATTCGAATGCAGATGATAGGTGGGGAGGGAGGGAGTGCGCGACATGGCATGGGGATTTGATGGACACAAGGACTTATTTGGATGCAAACCAAGAACTATATGTGCGAGTTGATGCAGTTGTTCTGGGTATTGTTTCCCCTTATCAGTTTACCTTCTTTCTTTTGTTTCTGCCAAATATGTGA

Protein Analysis

156

Amino Acids

17.47

Weight (kDa)

6.11

Isoelectric Point (pI)

55.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PAN_2 PF08276 52 - 118 1.6e-20 PAN-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 12
AccB1I GGYRCC 1 cut(s) 196
AccII CGCG 1 cut(s) 326
AciI CCGC 1 cut(s) 12
AcvI CACGTG 3 cut(s) 63, 188, 218
AflIII ACRYGT 2 cut(s) 187, 217
AgsI TTSAA 1 cut(s) 241
AluBI AGCT 1 cut(s) 237
AluI AGCT 1 cut(s) 237
Alw21I GWGCWC 1 cut(s) 62
Alw44I GTGCAC 1 cut(s) 58
AlwNI CAGNNNCTG 1 cut(s) 27
ApaLI GTGCAC 1 cut(s) 58
AspLEI GCGC 1 cut(s) 326
AspS9I GGNCC 1 cut(s) 14
AsuII TTCGAA 2 cut(s) 78, 290
AvaII GGWCC 1 cut(s) 14
BaeGI GKGCMC 2 cut(s) 62, 150
BanI GGYRCC 1 cut(s) 196
BbrPI CACGTG 3 cut(s) 63, 188, 218
Bbv12I GWGCWC 1 cut(s) 62
BccI CCATC 2 cut(s) 107, 340
BceAI ACGGC 1 cut(s) 228
Bme18I GGWCC 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 14
BmiI GGNNCC 1 cut(s) 198
BmsI GCATC 2 cut(s) 358, 388
Bpu14I TTCGAA 2 cut(s) 78, 290
BpuEI CTTGAG 1 cut(s) 127
BsaAI YACGTR 3 cut(s) 63, 188, 218
BsaXI ACNNNNNCTCC 4 cut(s) 114, 135, 144, 165
BseGI GGATG 1 cut(s) 373
BseSI GKGCMC 2 cut(s) 62, 150
Bsh1236I CGCG 1 cut(s) 326
BshNI GGYRCC 1 cut(s) 196
BsiHKAI GWGCWC 1 cut(s) 62
BslFI GGGAC 1 cut(s) 18
BsmFI GGGAC 1 cut(s) 18
BsmI GAATGC 2 cut(s) 208, 298
Bsp119I TTCGAA 2 cut(s) 78, 290
Bsp1286I GDGCHC 2 cut(s) 62, 150
BspACI CCGC 1 cut(s) 12
BspFNI CGCG 1 cut(s) 326
BspLI GGNNCC 1 cut(s) 198
BspT104I TTCGAA 2 cut(s) 78, 290
BspT107I GGYRCC 1 cut(s) 196
Bst4CI ACNGT 1 cut(s) 171
Bst6I CTCTTC 1 cut(s) 249
BstBAI YACGTR 3 cut(s) 63, 188, 218
BstBI TTCGAA 2 cut(s) 78, 290
BstF5I GGATG 1 cut(s) 373
BstFNI CGCG 1 cut(s) 326
BstHHI GCGC 1 cut(s) 326
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstSLI GKGCMC 2 cut(s) 62, 150
BstUI CGCG 1 cut(s) 326
BtsCI GGATG 1 cut(s) 373
CaiI CAGNNNCTG 1 cut(s) 27
CfoI GCGC 1 cut(s) 326
Cfr13I GGNCC 1 cut(s) 14
CviAII CATG 4 cut(s) 47, 280, 330, 335
CviJI RGCY 1 cut(s) 237
CviKI_1 RGCY 1 cut(s) 237
DrdI GACNNNNNNGTC 1 cut(s) 12
DseDI GACNNNNNNGTC 1 cut(s) 12
Eam1104I CTCTTC 1 cut(s) 249
EarI CTCTTC 1 cut(s) 249
Eco47I GGWCC 1 cut(s) 14
Eco72I CACGTG 3 cut(s) 63, 188, 218
FaeI CATG 4 cut(s) 50, 283, 333, 338
FaqI GGGAC 1 cut(s) 18
FatI CATG 4 cut(s) 46, 279, 329, 334
FokI GGATG 1 cut(s) 380
GlaI GCGC 1 cut(s) 325
HhaI GCGC 1 cut(s) 326
Hin1II CATG 4 cut(s) 50, 283, 333, 338
Hin6I GCGC 1 cut(s) 324
HinP1I GCGC 1 cut(s) 324
Hpy166II GTNNAC 3 cut(s) 60, 223, 435
Hpy188III TCNNGA 1 cut(s) 120
Hpy8I GTNNAC 3 cut(s) 60, 223, 435
HpyAV CCTTC 2 cut(s) 187, 448
HpyCH4III ACNGT 1 cut(s) 171
HpyCH4IV ACGT 3 cut(s) 62, 187, 217
HpyCH4V TGCA 6 cut(s) 60, 91, 279, 296, 371, 401
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpySE526I ACGT 3 cut(s) 62, 187, 217
Hsp92II CATG 4 cut(s) 50, 283, 333, 338
HspAI GCGC 1 cut(s) 324
LpnPI CCDG 1 cut(s) 395
LweI GCATC 2 cut(s) 358, 388
MaeII ACGT 3 cut(s) 62, 187, 217
MboII GAAGA 2 cut(s) 263, 266
MhlI GDGCHC 2 cut(s) 62, 150
MnlI CCTC 4 cut(s) 116, 258, 305, 309
MslI CAYNNNNRTG 1 cut(s) 230
Mva1269I GAATGC 2 cut(s) 208, 298
MvnI CGCG 1 cut(s) 326
MwoI GCNNNNNNNGC 1 cut(s) 212
NlaIII CATG 4 cut(s) 50, 283, 333, 338
NlaIV GGNNCC 1 cut(s) 198
NspV TTCGAA 2 cut(s) 78, 290
PctI GAATGC 2 cut(s) 208, 298
PmaCI CACGTG 3 cut(s) 63, 188, 218
PmlI CACGTG 3 cut(s) 63, 188, 218
Ppu21I YACGTR 3 cut(s) 63, 188, 218
PspCI CACGTG 3 cut(s) 63, 188, 218
PspN4I GGNNCC 1 cut(s) 198
PspPI GGNCC 1 cut(s) 14
PstNI CAGNNNCTG 1 cut(s) 27
RseI CAYNNNNRTG 1 cut(s) 230
Sau96I GGNCC 1 cut(s) 14
SduI GDGCHC 2 cut(s) 62, 150
SetI ASST 8 cut(s) 65, 183, 190, 198, 220, 239, 308, 440
SfaNI GCATC 2 cut(s) 358, 388
SfuI TTCGAA 2 cut(s) 78, 290
SinI GGWCC 1 cut(s) 14
SmiMI CAYNNNNRTG 1 cut(s) 230
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
SsiI CCGC 1 cut(s) 12
TaaI ACNGT 1 cut(s) 171
TaiI ACGT 3 cut(s) 65, 190, 220
TaqI TCGA 2 cut(s) 78, 290
TspDTI ATGAA 1 cut(s) 111
VneI GTGCAC 1 cut(s) 58
VpaK11BI GGWCC 1 cut(s) 14
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.