FvH4_3g03241

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000099
Physical Location & Seq
Reverse (-)
1740132 .. 1743982
3851 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g03241.t1

Sequence Viewer

Length: 2307 bp
ATGAACTCTGCTGCTGATTGTTATATCAGCTTATTGCTTACCTTCCTTCTTCTCCAGTGTTCCAACTCCTCTGACAACATTACTCCAAACAAGCCCATTACAGACGGCGTTGTTCTCGTCTCGAGCGGGAAAATCTTTGCACTTGGATTCTTCAGCCCAGGAAATTCCAGCAAGCGTTTCGTCGGAGTCTGGTATAACAATGTTCCCAACCAAACAGTTGTGTGGGTTGCAAACAGAAACAGACCTCTCAACGATACCAGTGGACTCCTAGCAGTACATGGAAACGGAGGGCTTGTCATCTATGGAAAGGACCGAGGTACCCCCATATGGTCCGCTAATGTTACTCTAAATCCACCCGGTAATTTCTTAGCCAAGATTTTGGATACAGGTAATCTTGTTTTGCATGATAATACGAGCCAAAGTGTTTCGTGGCAAAGCTTTGATTATCCCACAAATACAATGCTTCCAGGAATGAAACTTATGGTGGACCGGCGGTCCGGTTTGAACCGGTTCCTGACATCTTGGAAGTCTAAAGATGATCCGGGCACCGGGAACTGTTCGTACCGGGTTGATCCAGATGGCTTGCCGCAGATGTTTCTTTACAAGGATGGAGCTCCACGGTGGCGATCCGAGATAACTTCTTGGAACAGCAAGACATGGAAAGATGTGATGCGTTACTTCAACAATCAAGATGAGGTCTCTCTTATGTCTGTCGTTAACACCAATTCCTCAATCCCACCGAGGACGGTGCTGCATGAATCAGGAGTCGTTGAATGGTATGCTTGGAATGATCTATTACAACAATGGACCAAGTACTGGTCTGCCCCAAGTGATCGGTGTGATAGCTATGGACAGTGTGGTTTAAATGGTAAATGTGACCCTTACCGTGTTGAAGACAGGGTGGTTACCCTCGGCTGCTCTTGCCTACCCGGGTTCGGACCGAAGTCGCCGACTCACTGGAAAATGAGAAATGGCTCGGACGGGTGCATAAGGGAGACAAGAGAGGCAAACATGTGTAGGAATGGGGAAGGGTTTGTGAAGGTGGAAAATGTGAAAATACCAAACTCGTCGAGGGCACGCGTGAATATGAACGTGAGTTTGAAAGGGTGTGAGCAGGAGTGCTTGAGGAACTGTTCTTGCACGGCGTACTCCGGTGCCGATGAGAGCAGCGAGGAGAATGGATGTGTAACATGGTATGGTGACTTGATGGACACAAGTACTATTTTGGATGGTGGTCAAGATTTATATGTCCGAGTTAATGCAAGTGTCTTAGGGTCAACATACTTTGCAGAATCTGATAATACAAACTCAGATTTACCATTCTTTAATCTAACAATCATCGGAGCCGCGACGAACAATTTCTCTGTTGAAAACATGATTGGAACAGGCGGCTTTGGCTCTGTTTATAAGGGGACCCTTTCGAATGGAACGGAAATAGCAGTAAAACGACTTTCAGAGAATTCAGGTCAAGGAATTCAGGAGTTTAAGAATGAAGTCATGTTGATAGCAAAACTCCAACACAGAAATCTTGTGAGAATATTTGGTTGTTGTGTTCAAGATAAAGAGAAAATGCTAATCTATGAACACTTGCCGAATAGAAGCTTGGACCTTTTCATTTTCAATGAAACCAATAGAGCACTTTTAGATTGGACAAAACGTTGTGAGATTATTCATGGGATTGCTCGAGGACTCTTATATATGCATCAAGATTCAAGGTTAAGAATCATCCATAGAGATCTGAAGGCTAGCAACGTTCTACTGGATGCTTCGATGAATCCGAAGATTGCAGATTTTGGTCTGGCGAAAATATTTAGGGGAGATCAAAGTGAATGTGAAGCAAATACAAACCGTGTGGTTGGAACATATGGTTATATGTCACCAGAGTATGCAATGGAAGGAATATTTTCACTAAAGTCGGATGTTTATAGTTTTGGGGTTCTAGTACTGGAAATCATTACTGGTCAAAAGAACACTAGGCAGTTCCATACACAATATCAGAACACAAATCTGGTTAAATATGTATGGAACTTGTGGAAAGAAGGTAATGTCTTGGAAGTCGTTGATCCATTTCTCGGCGTATCATACCCTGTCAATGAAGTTCTCCGATGTATCCAAATCGCCTTCTTGTGCGTGCAAGAGTATGCTACTGACCGGCCAAACATGTCAGCGGTTCTTCTAATGTTGAGTAACGATGCAGATCTTCCTTCACCAAAACGACGGACTGCGTATTCATTGTTGGAGATAAGTGATGACAGTGGAGAATGGTCAAGCCGTGTAAGAGCTGATCCCGTAAATGAACTGATATGA

Protein Analysis

769

Amino Acids

85.91

Weight (kDa)

6.03

Isoelectric Point (pI)

33.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 72 - 176 5.4e-34 D-mannose binding lectin
S_locus_glycop PF00954 220 - 316 1.3e-15 S-locus glycoprotein domain
PAN_2 PF08276 339 - 405 5.9e-20 PAN-like domain
Pkinase PF00069 455 - 666 7.1e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 456 - 724 7.4e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1407
Acc65I GGTACC 1 cut(s) 317
AccB1I GGYRCC 3 cut(s) 317, 545, 1154
AccB7I CCANNNNNTGG 1 cut(s) 816
AccBSI CCGCTC 1 cut(s) 126
AccII CGCG 2 cut(s) 1080, 1349
AciI CCGC 7 cut(s) 126, 333, 493, 587, 1347, 1389, 2168
AclI AACGTT 2 cut(s) 1657, 1752
AclWI GGATC 5 cut(s) 533, 566, 621, 2057, 2279
AcoI YGGCCR 1 cut(s) 2153
AcsI RAATTY 3 cut(s) 163, 1459, 1473
AcuI CTGAAG 2 cut(s) 136, 1760
AfaI GTAC 7 cut(s) 276, 319, 563, 815, 1148, 1219, 1944
AfiI CCNNNNNNNGG 5 cut(s) 327, 548, 816, 935, 2072
AflIII ACRYGT 3 cut(s) 1011, 1078, 2160
AgeI ACCGGT 1 cut(s) 507
AgsI TTSAA 9 cut(s) 505, 682, 773, 893, 1102, 1370, 1556, 1621, 1713
AhdI GACNNNNNGTC 1 cut(s) 493
AjnI CCWGG 2 cut(s) 157, 466
AjuI GAANNNNNNNTTGG 4 cut(s) 1362, 1394, 1586, 1618
AluBI AGCT 6 cut(s) 30, 438, 614, 846, 1602, 2282
AluI AGCT 6 cut(s) 30, 438, 614, 846, 1602, 2282
Alw21I GWGCWC 2 cut(s) 616, 1639
Alw26I GTCTC 3 cut(s) 124, 703, 989
AlwI GGATC 5 cut(s) 533, 566, 621, 2057, 2279
AlwNI CAGNNNCTG 1 cut(s) 1295
Ama87I CYCGRG 3 cut(s) 121, 929, 1683
AoxI GGCC 1 cut(s) 2153
ApeKI GCWGC 4 cut(s) 11, 751, 915, 1167
ApoI RAATTY 3 cut(s) 163, 1459, 1473
AsiGI ACCGGT 1 cut(s) 507
Asp700I GAANNNNTTC 3 cut(s) 509, 1358, 1903
Asp718I GGTACC 1 cut(s) 317
AspS9I GGNCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
AsuC2I CCSGG 6 cut(s) 357, 543, 550, 566, 930, 931
AsuHPI GGTGA 3 cut(s) 1211, 1869, 2199
AsuII TTCGAA 1 cut(s) 1421
AsuNHI GCTAGC 1 cut(s) 1745
AvaI CYCGRG 3 cut(s) 121, 929, 1683
AvaII GGWCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
BaeGI GKGCMC 2 cut(s) 548, 1078
BaeI ACNNNNGTAYC 2 cut(s) 301, 334
BanI GGYRCC 3 cut(s) 317, 545, 1154
BanII GRGCYC 1 cut(s) 616
BbsI GAAGAC 1 cut(s) 900
Bbv12I GWGCWC 2 cut(s) 616, 1639
BbvI GCAGC 3 cut(s) 738, 902, 1179
BccI CCATC 4 cut(s) 572, 602, 1201, 1223
BceAI ACGGC 3 cut(s) 121, 1158, 2256
BcgI CGANNNNNNTGC 4 cut(s) 160, 194, 730, 764
BciT130I CCWGG 2 cut(s) 159, 468
BciVI GTATCC 2 cut(s) 376, 2120
BcnI CCSGG 6 cut(s) 357, 543, 550, 566, 930, 931
BcoDI GTCTC 3 cut(s) 124, 703, 989
BfaI CTAG 4 cut(s) 269, 1746, 1940, 1974
BfuI GTATCC 2 cut(s) 376, 2120
BglII AGATCT 2 cut(s) 1735, 2197
BisI GCNGC 7 cut(s) 12, 587, 752, 916, 1168, 1347, 1390
BlsI GCNGC 7 cut(s) 13, 588, 753, 917, 1169, 1348, 1391
BmcAI AGTACT 3 cut(s) 815, 1219, 1944
Bme1390I CCNGG 8 cut(s) 159, 357, 468, 543, 550, 566, 930, 931
Bme18I GGWCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
BmeRI GACNNNNNGTC 1 cut(s) 493
BmeT110I CYCGRG 3 cut(s) 121, 929, 1683
BmgT120I GGNCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
BmiI GGNNCC 7 cut(s) 319, 512, 547, 1156, 1345, 1414, 1415
BmrFI CCNGG 8 cut(s) 159, 357, 468, 543, 550, 566, 930, 931
BmsI GCATC 4 cut(s) 660, 1711, 1753, 2182
BmtI GCTAGC 1 cut(s) 1749
BoxI GACNNNNGTC 1 cut(s) 943
BpiI GAAGAC 1 cut(s) 900
BpmI CTGGAG 1 cut(s) 38
Bpu14I TTCGAA 1 cut(s) 1421
BpuEI CTTGAG 1 cut(s) 1144
BpuMI CCSGG 6 cut(s) 357, 543, 550, 566, 930, 931
BsaBI GATNNNNATC 1 cut(s) 2196
BsaI GGTCTC 1 cut(s) 703
BsaJI CCNNGG 6 cut(s) 157, 313, 617, 740, 910, 929
BsaWI WCCGGW 3 cut(s) 497, 507, 1151
BsaXI ACNNNNNCTCC 2 cut(s) 279, 309
Bsc4I CCNNNNNNNGG 5 cut(s) 327, 548, 816, 935, 2072
Bse118I RCCGGY 3 cut(s) 489, 507, 2151
Bse1I ACTGG 7 cut(s) 55, 258, 821, 962, 1764, 1950, 1963
Bse3DI GCAATG 1 cut(s) 1896
Bse8I GATNNNNATC 1 cut(s) 2196
BseBI CCWGG 2 cut(s) 159, 468
BseDI CCNNGG 6 cut(s) 157, 313, 617, 740, 910, 929
BseGI GGATG 6 cut(s) 613, 1187, 1234, 1725, 1768, 1924
BseJI GATNNNNATC 1 cut(s) 2196
BseLI CCNNNNNNNGG 5 cut(s) 327, 548, 816, 935, 2072
BseMI GCAATG 1 cut(s) 1896
BseMII CTCAG 1 cut(s) 1323
BseNI ACTGG 7 cut(s) 55, 258, 821, 962, 1764, 1950, 1963
BseRI GAGGAG 2 cut(s) 58, 1187
BseSI GKGCMC 2 cut(s) 548, 1078
BseXI GCAGC 3 cut(s) 738, 902, 1179
Bsh1236I CGCG 2 cut(s) 1080, 1349
BshFI GGCC 1 cut(s) 2155
BshNI GGYRCC 3 cut(s) 317, 545, 1154
BshTI ACCGGT 1 cut(s) 507
BsiHKAI GWGCWC 2 cut(s) 616, 1639
BsiHKCI CYCGRG 3 cut(s) 121, 929, 1683
BslFI GGGAC 1 cut(s) 1426
BslI CCNNNNNNNGG 5 cut(s) 327, 548, 816, 935, 2072
BsmAI GTCTC 3 cut(s) 124, 703, 989
BsmBI CGTCTC 1 cut(s) 124
BsmFI GGGAC 1 cut(s) 1426
BsnI GGCC 1 cut(s) 2155
Bso31I GGTCTC 1 cut(s) 703
BsoBI CYCGRG 3 cut(s) 121, 929, 1683
Bsp119I TTCGAA 1 cut(s) 1421
Bsp1286I GDGCHC 4 cut(s) 548, 616, 1078, 1639
BspACI CCGC 7 cut(s) 126, 333, 493, 587, 1347, 1389, 2168
BspANI GGCC 1 cut(s) 2155
BspCNI CTCAG 1 cut(s) 1322
BspFNI CGCG 2 cut(s) 1080, 1349
BspLI GGNNCC 7 cut(s) 319, 512, 547, 1156, 1345, 1414, 1415
BspOI GCTAGC 1 cut(s) 1749
BspPI GGATC 5 cut(s) 533, 566, 621, 2057, 2279
BspT104I TTCGAA 1 cut(s) 1421
BspT107I GGYRCC 3 cut(s) 317, 545, 1154
BspTNI GGTCTC 1 cut(s) 703
BsrBI CCGCTC 1 cut(s) 126
BsrDI GCAATG 1 cut(s) 1896
BsrFI RCCGGY 3 cut(s) 489, 507, 2151
BsrI ACTGG 7 cut(s) 55, 258, 821, 962, 1764, 1950, 1963
BssAI RCCGGY 3 cut(s) 489, 507, 2151
BssECI CCNNGG 6 cut(s) 157, 313, 617, 740, 910, 929
Bst2UI CCWGG 2 cut(s) 159, 468
Bst4CI ACNGT 9 cut(s) 217, 557, 621, 748, 855, 887, 1133, 1850, 2255
BstBI TTCGAA 1 cut(s) 1421
BstC8I GCNNGC 5 cut(s) 173, 584, 1078, 1747, 2132
BstDEI CTNAG 3 cut(s) 367, 1270, 1309
BstDSI CCRYGG 1 cut(s) 617
BstEII GGTNACC 1 cut(s) 904
BstF5I GGATG 6 cut(s) 613, 1187, 1234, 1725, 1768, 1924
BstFNI CGCG 2 cut(s) 1080, 1349
BstMAI GTCTC 3 cut(s) 124, 703, 989
BstMWI GCNNNNNNNGC 2 cut(s) 921, 1395
BstNI CCWGG 2 cut(s) 159, 468
BstNSI RCATGY 2 cut(s) 1015, 2164
BstPAI GACNNNNGTC 1 cut(s) 943
BstPI GGTNACC 1 cut(s) 904
BstSCI CCNGG 8 cut(s) 157, 355, 466, 541, 548, 564, 928, 929
BstSLI GKGCMC 2 cut(s) 548, 1078
BstUI CGCG 2 cut(s) 1080, 1349
BstV1I GCAGC 3 cut(s) 738, 902, 1179
BstV2I GAAGAC 1 cut(s) 900
BstX2I RGATCY 2 cut(s) 1735, 2197
BstXI CCANNNNNNTGG 1 cut(s) 379
BstYI RGATCY 2 cut(s) 1735, 2197
BsuI GTATCC 2 cut(s) 376, 2120
BsuRI GGCC 1 cut(s) 2155
BtgI CCRYGG 1 cut(s) 617
BtsCI GGATG 6 cut(s) 613, 1187, 1234, 1725, 1768, 1924
BtsIMutI CAGTG 5 cut(s) 62, 265, 860, 955, 2260
Cac8I GCNNGC 5 cut(s) 173, 584, 1078, 1747, 2132
CaiI CAGNNNCTG 1 cut(s) 1295
Cfr10I RCCGGY 3 cut(s) 489, 507, 2151
Cfr13I GGNCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
Cfr9I CCCGGG 1 cut(s) 929
CpoI CGGWCCG 2 cut(s) 495, 938
Csp6I GTAC 7 cut(s) 275, 318, 562, 814, 1147, 1218, 1943
CspAI ACCGGT 1 cut(s) 507
CspCI CAANNNNNGTGG 2 cut(s) 1833, 1868
CspI CGGWCCG 2 cut(s) 495, 938
CviQI GTAC 7 cut(s) 275, 318, 562, 814, 1147, 1218, 1943
DdeI CTNAG 3 cut(s) 367, 1270, 1309
DraI TTTAAA 1 cut(s) 864
DriI GACNNNNNGTC 1 cut(s) 493
EaeI YGGCCR 1 cut(s) 2153
Eam1105I GACNNNNNGTC 1 cut(s) 493
Ecl136II GAGCTC 1 cut(s) 614
Eco24I GRGCYC 1 cut(s) 616
Eco31I GGTCTC 1 cut(s) 703
Eco47I GGWCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
Eco53kI GAGCTC 1 cut(s) 614
Eco57I CTGAAG 2 cut(s) 136, 1760
Eco88I CYCGRG 3 cut(s) 121, 929, 1683
Eco91I GGTNACC 1 cut(s) 904
EcoICRI GAGCTC 1 cut(s) 614
EcoO109I RGGNCCY 1 cut(s) 1413
EcoO65I GGTNACC 1 cut(s) 904
EcoRI GAATTC 2 cut(s) 1459, 1473
EcoRII CCWGG 2 cut(s) 157, 466
EcoT22I ATGCAT 1 cut(s) 1704
EcoT38I GRGCYC 1 cut(s) 616
Esp3I CGTCTC 1 cut(s) 124
FaqI GGGAC 1 cut(s) 1426
FauI CCCGC 1 cut(s) 119
FauNDI CATATG 2 cut(s) 326, 1864
Fnu4HI GCNGC 7 cut(s) 12, 587, 752, 916, 1168, 1347, 1390
FokI GGATG 6 cut(s) 620, 1194, 1241, 1712, 1775, 1931
FriOI GRGCYC 1 cut(s) 616
Fsp4HI GCNGC 7 cut(s) 12, 587, 752, 916, 1168, 1347, 1390
FspBI CTAG 4 cut(s) 269, 1746, 1940, 1974
GluI GCNGC 7 cut(s) 12, 587, 752, 916, 1168, 1347, 1390
GsuI CTGGAG 1 cut(s) 38
HaeIII GGCC 1 cut(s) 2155
HincII GTYRAC 2 cut(s) 718, 1278
HindII GTYRAC 2 cut(s) 718, 1278
HindIII AAGCTT 2 cut(s) 436, 1600
HpaI GTTAAC 1 cut(s) 718
HphI GGTGA 3 cut(s) 1211, 1869, 2199
Hpy166II GTNNAC 4 cut(s) 263, 487, 718, 1278
Hpy188III TCNNGA 9 cut(s) 121, 514, 575, 689, 762, 1238, 1478, 1556, 1706
Hpy8I GTNNAC 4 cut(s) 263, 487, 718, 1278
Hpy99I CGWCG 4 cut(s) 185, 1072, 1354, 2220
HpyAV CCTTC 9 cut(s) 52, 56, 1022, 1033, 1735, 1889, 2033, 2131, 2214
HpyCH4III ACNGT 9 cut(s) 217, 557, 621, 748, 855, 887, 1133, 1850, 2255
HpyCH4IV ACGT 3 cut(s) 1092, 1657, 1752
HpyF10VI GCNNNNNNNGC 2 cut(s) 921, 1395
HpyF3I CTNAG 3 cut(s) 367, 1270, 1309
HpySE526I ACGT 3 cut(s) 1092, 1657, 1752
KflI GGGWCCC 1 cut(s) 1413
KpnI GGTACC 1 cut(s) 321
KspAI GTTAAC 1 cut(s) 718
LmnI GCTCC 3 cut(s) 611, 619, 1343
Lsp1109I GCAGC 3 cut(s) 738, 902, 1179
LweI GCATC 4 cut(s) 660, 1711, 1753, 2182
MaeI CTAG 4 cut(s) 269, 1746, 1940, 1974
MaeII ACGT 3 cut(s) 1092, 1657, 1752
MaeIII GTNAC 8 cut(s) 340, 674, 875, 904, 1186, 1199, 1875, 2186
MbiI CCGCTC 1 cut(s) 126
MboII GAAGA 6 cut(s) 41, 142, 905, 1792, 2165, 2192
MflI RGATCY 2 cut(s) 1735, 2197
MhlI GDGCHC 4 cut(s) 548, 616, 1078, 1639
MluCI AATT 6 cut(s) 163, 361, 724, 1357, 1459, 1473
MluI ACGCGT 1 cut(s) 1078
MlyI GAGTC 5 cut(s) 195, 258, 774, 946, 1683
MmeI TCCRAC 6 cut(s) 87, 163, 1540, 1837, 1896, 2217
Mph1103I ATGCAT 1 cut(s) 1704
MroXI GAANNNNTTC 3 cut(s) 509, 1358, 1903
MseI TTAA 7 cut(s) 717, 863, 1257, 1326, 1485, 1718, 2013
MspA1I CMGCKG 1 cut(s) 2168
MspR9I CCNGG 8 cut(s) 159, 357, 468, 543, 550, 566, 930, 931
MvaI CCWGG 2 cut(s) 159, 468
MvnI CGCG 2 cut(s) 1080, 1349
MwoI GCNNNNNNNGC 2 cut(s) 921, 1395
NciI CCSGG 6 cut(s) 357, 543, 550, 566, 930, 931
NdeI CATATG 2 cut(s) 326, 1864
NheI GCTAGC 1 cut(s) 1745
NlaIV GGNNCC 7 cut(s) 319, 512, 547, 1156, 1345, 1414, 1415
NmeAIII GCCGAG 2 cut(s) 891, 2052
NmuCI GTSAC 3 cut(s) 875, 1199, 1875
NsiI ATGCAT 1 cut(s) 1704
NspI RCATGY 2 cut(s) 1015, 2164
NspV TTCGAA 1 cut(s) 1421
PaeR7I CTCGAG 2 cut(s) 121, 1683
PciI ACATGT 2 cut(s) 1011, 2160
PcsI WCGNNNNNNNCGW 1 cut(s) 1775
PdmI GAANNNNTTC 3 cut(s) 509, 1358, 1903
PfeI GAWTC 6 cut(s) 147, 758, 1292, 1709, 1722, 1774
PflMI CCANNNNNTGG 1 cut(s) 816
PfoI TCCNGGA 1 cut(s) 466
PinAI ACCGGT 1 cut(s) 507
PkrI GCNGC 7 cut(s) 13, 588, 753, 917, 1169, 1348, 1391
PleI GAGTC 5 cut(s) 194, 258, 773, 946, 1683
PpsI GAGTC 5 cut(s) 194, 258, 773, 946, 1683
PpuMI RGGWCCY 1 cut(s) 1413
PscI ACATGT 2 cut(s) 1011, 2160
PshAI GACNNNNGTC 1 cut(s) 943
PsiI TTATAA 1 cut(s) 1407
Psp124BI GAGCTC 1 cut(s) 616
Psp1406I AACGTT 2 cut(s) 1657, 1752
Psp5II RGGWCCY 1 cut(s) 1413
Psp6I CCWGG 2 cut(s) 157, 466
PspEI GGTNACC 1 cut(s) 904
PspGI CCWGG 2 cut(s) 157, 466
PspN4I GGNNCC 7 cut(s) 319, 512, 547, 1156, 1345, 1414, 1415
PspPI GGNCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
PspPPI RGGWCCY 1 cut(s) 1413
PspXI VCTCGAGB 1 cut(s) 1683
PsrI GAACNNNNNNTAC 2 cut(s) 545, 577
PstNI CAGNNNCTG 1 cut(s) 1295
PsuI RGATCY 2 cut(s) 1735, 2197
RsaI GTAC 7 cut(s) 276, 319, 563, 815, 1148, 1219, 1944
RsaNI GTAC 7 cut(s) 275, 318, 562, 814, 1147, 1218, 1943
Rsr2I CGGWCCG 2 cut(s) 495, 938
RsrII CGGWCCG 2 cut(s) 495, 938
SacI GAGCTC 1 cut(s) 616
SaqAI TTAA 7 cut(s) 717, 863, 1257, 1326, 1485, 1718, 2013
SatI GCNGC 7 cut(s) 12, 587, 752, 916, 1168, 1347, 1390
Sau96I GGNCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
ScaI AGTACT 3 cut(s) 815, 1219, 1944
SchI GAGTC 5 cut(s) 195, 258, 774, 946, 1683
ScrFI CCNGG 8 cut(s) 159, 357, 468, 543, 550, 566, 930, 931
SduI GDGCHC 4 cut(s) 548, 616, 1078, 1639
SfaNI GCATC 4 cut(s) 660, 1711, 1753, 2182
Sfr274I CTCGAG 2 cut(s) 121, 1683
SfuI TTCGAA 1 cut(s) 1421
SinI GGWCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
SlaI CTCGAG 2 cut(s) 121, 1683
SmaI CCCGGG 1 cut(s) 931
SmlI CTYRAG 3 cut(s) 121, 1123, 1683
SmoI CTYRAG 3 cut(s) 121, 1123, 1683
Sse9I AATT 6 cut(s) 163, 361, 724, 1357, 1459, 1473
SsiI CCGC 7 cut(s) 126, 333, 493, 587, 1347, 1389, 2168
SspI AATATT 3 cut(s) 1539, 1809, 1902
SspMI CTAG 4 cut(s) 269, 1746, 1940, 1974
SstI GAGCTC 1 cut(s) 616
StyD4I CCNGG 8 cut(s) 157, 355, 466, 541, 548, 564, 928, 929
TaaI ACNGT 9 cut(s) 217, 557, 621, 748, 855, 887, 1133, 1850, 2255
TaiI ACGT 3 cut(s) 1095, 1660, 1755
TaqI TCGA 5 cut(s) 122, 1070, 1421, 1684, 1769
TaqII GACCGA 2 cut(s) 327, 955
TasI AATT 6 cut(s) 163, 361, 724, 1357, 1459, 1473
TatI WGTACW 4 cut(s) 274, 813, 1217, 1942
TauI GCSGC 3 cut(s) 589, 1349, 1392
TfiI GAWTC 6 cut(s) 147, 758, 1292, 1709, 1722, 1774
Tru1I TTAA 7 cut(s) 717, 863, 1257, 1326, 1485, 1718, 2013
Tru9I TTAA 7 cut(s) 717, 863, 1257, 1326, 1485, 1718, 2013
TscAI CASTG 5 cut(s) 62, 265, 860, 962, 2260
TseFI GTSAC 3 cut(s) 875, 1199, 1875
TseI GCWGC 4 cut(s) 11, 751, 915, 1167
Tsp45I GTSAC 3 cut(s) 875, 1199, 1875
TspGWI ACGGA 3 cut(s) 300, 1445, 2233
TspMI CCCGGG 1 cut(s) 929
TspRI CASTG 5 cut(s) 62, 265, 860, 962, 2260
Van91I CCANNNNNTGG 1 cut(s) 816
VpaK11BI GGWCC 8 cut(s) 310, 330, 487, 495, 807, 938, 1413, 1606
XapI RAATTY 3 cut(s) 163, 1459, 1473
XceI RCATGY 2 cut(s) 1015, 2164
XhoI CTCGAG 2 cut(s) 121, 1683
XmaI CCCGGG 1 cut(s) 929
XmnI GAANNNNTTC 3 cut(s) 509, 1358, 1903
XspI CTAG 4 cut(s) 269, 1746, 1940, 1974
ZrmI AGTACT 3 cut(s) 815, 1219, 1944
Zsp2I ATGCAT 1 cut(s) 1704
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.