Rroxscaffold_1G00044990

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
64035229 .. 64037056
1828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00044990.1

Sequence Viewer

Length: 675 bp
ATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGAGTGTAAAACTACCGAACTCGTCTACGGCACGTGTGAACATGAGAATGAGTTTGGAAGAGTGCAGACAACGGTGCTTGATGGATTGTTCCTGCACAGCTTACACAAGTGCGGACGACCGGGGAGGTGGGATCGGGTGTATAACATGGCACGGGGACTTGATGGACATGAGGACTTTCTCCGATCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGTATGGCCGGCAATTGCACTTGGATCTGTTACAGTTTTTATTGTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATTCATTTGAACGTATTGCTGGGTCAACCTACTTCGAAGAAGCTACTGGTGGATTAGCTCTTGATGATAGTAGAATAAACTCGGAGTTACTATTATTTCATCTAAACACCGTAGCCACCGCCACAAACAATTTTTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAATGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCGATTGCAAAACTCCAACACAGAAACCTTGTTAAGATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

224

Amino Acids

25.38

Weight (kDa)

9.32

Isoelectric Point (pI)

44.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 540
AccI GTMKAC 1 cut(s) 57
AciI CCGC 2 cut(s) 144, 480
AclWI GGATC 2 cut(s) 171, 286
AcoI YGGCCR 2 cut(s) 260, 598
AcvI CACGTG 1 cut(s) 66
AfiI CCNNNNNNNGG 1 cut(s) 315
AflIII ACRYGT 1 cut(s) 65
AgsI TTSAA 3 cut(s) 371, 503, 611
AjuI GAANNNNNNNTTGG 4 cut(s) 495, 510, 527, 542
AluBI AGCT 4 cut(s) 132, 404, 419, 511
AluI AGCT 4 cut(s) 132, 404, 419, 511
AlwI GGATC 2 cut(s) 171, 286
AoxI GGCC 2 cut(s) 260, 598
Asp700I GAANNNNTTC 1 cut(s) 630
AsuC2I CCSGG 1 cut(s) 153
AsuII TTCGAA 1 cut(s) 396
BalI TGGCCA 1 cut(s) 600
BbrPI CACGTG 1 cut(s) 66
BccI CCATC 3 cut(s) 107, 188, 551
BceAI ACGGC 2 cut(s) 76, 557
BciVI GTATCC 1 cut(s) 540
BcnI CCSGG 1 cut(s) 153
BfuI GTATCC 1 cut(s) 540
Bme1390I CCNGG 1 cut(s) 153
BmiI GGNNCC 1 cut(s) 532
BmrFI CCNGG 1 cut(s) 153
Bpu14I TTCGAA 1 cut(s) 396
BpuMI CCSGG 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 66
BsaJI CCNNGG 2 cut(s) 152, 601
Bsc4I CCNNNNNNNGG 1 cut(s) 315
Bse118I RCCGGY 1 cut(s) 262
Bse1I ACTGG 1 cut(s) 412
BseDI CCNNGG 2 cut(s) 152, 601
BseGI GGATG 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 315
BseNI ACTGG 1 cut(s) 412
BseYI CCCAGC 1 cut(s) 380
BsgI GTGCAG 2 cut(s) 110, 116
Bsh1285I CGRYCG 1 cut(s) 152
BshFI GGCC 2 cut(s) 262, 600
BsiEI CGRYCG 1 cut(s) 152
BsiSI CCGG 2 cut(s) 152, 263
BslFI GGGAC 1 cut(s) 201
BslI CCNNNNNNNGG 1 cut(s) 315
BsmFI GGGAC 1 cut(s) 201
BsnI GGCC 2 cut(s) 262, 600
Bsp119I TTCGAA 1 cut(s) 396
Bsp143I GATC 3 cut(s) 163, 215, 278
BspACI CCGC 2 cut(s) 144, 480
BspANI GGCC 2 cut(s) 262, 600
BspLI GGNNCC 1 cut(s) 532
BspPI GGATC 2 cut(s) 171, 286
BspT104I TTCGAA 1 cut(s) 396
BsrFI RCCGGY 1 cut(s) 262
BsrI ACTGG 1 cut(s) 412
BssAI RCCGGY 1 cut(s) 262
BssECI CCNNGG 2 cut(s) 152, 601
BssMI GATC 3 cut(s) 163, 215, 278
BssT1I CCWWGG 1 cut(s) 601
Bst4CI ACNGT 3 cut(s) 106, 289, 472
Bst6I CTCTTC 2 cut(s) 85, 606
BstBAI YACGTR 1 cut(s) 66
BstBI TTCGAA 1 cut(s) 396
BstC8I GCNNGC 1 cut(s) 264
BstDEI CTNAG 1 cut(s) 245
BstF5I GGATG 1 cut(s) 333
BstKTI GATC 3 cut(s) 166, 218, 281
BstMBI GATC 3 cut(s) 163, 215, 278
BstMCI CGRYCG 1 cut(s) 152
BstSCI CCNGG 1 cut(s) 151
BstX2I RGATCY 1 cut(s) 278
BstYI RGATCY 1 cut(s) 278
BsuI GTATCC 1 cut(s) 540
BsuRI GGCC 2 cut(s) 262, 600
BtsCI GGATG 1 cut(s) 333
Cac8I GCNNGC 1 cut(s) 264
Cfr10I RCCGGY 1 cut(s) 262
CviAII CATG 3 cut(s) 74, 178, 200
CviJI RGCY 9 cut(s) 132, 262, 404, 419, 476, 511, 531, 572, 600
CviKI_1 RGCY 9 cut(s) 132, 262, 404, 419, 476, 511, 531, 572, 600
DdeI CTNAG 1 cut(s) 245
DpnI GATC 3 cut(s) 165, 217, 280
DpnII GATC 3 cut(s) 163, 215, 278
EaeI YGGCCR 2 cut(s) 260, 598
Eam1104I CTCTTC 2 cut(s) 85, 606
EarI CTCTTC 2 cut(s) 85, 606
Eco130I CCWWGG 1 cut(s) 601
Eco72I CACGTG 1 cut(s) 66
EcoT14I CCWWGG 1 cut(s) 601
ErhI CCWWGG 1 cut(s) 601
FaeI CATG 3 cut(s) 77, 181, 203
FaiI YATR 7 cut(s) 75, 174, 179, 201, 225, 259, 540
FaqI GGGAC 1 cut(s) 201
FatI CATG 3 cut(s) 73, 177, 199
FblI GTMKAC 1 cut(s) 57
FokI GGATG 1 cut(s) 340
GsaI CCCAGC 1 cut(s) 384
HaeIII GGCC 2 cut(s) 262, 600
HapII CCGG 2 cut(s) 152, 263
Hin1II CATG 3 cut(s) 77, 181, 203
HincII GTYRAC 1 cut(s) 387
HindII GTYRAC 1 cut(s) 387
HindIII AAGCTT 1 cut(s) 509
HpaII CCGG 2 cut(s) 152, 263
Hpy166II GTNNAC 3 cut(s) 58, 71, 387
Hpy188I TCNGA 2 cut(s) 215, 445
Hpy188III TCNNGA 2 cut(s) 23, 422
Hpy8I GTNNAC 3 cut(s) 58, 71, 387
HpyAV CCTTC 4 cut(s) 9, 20, 247, 512
HpyCH4III ACNGT 3 cut(s) 106, 289, 472
HpyCH4IV ACGT 2 cut(s) 65, 373
HpyCH4V TGCA 5 cut(s) 97, 127, 227, 272, 640
HpyF3I CTNAG 1 cut(s) 245
HpySE526I ACGT 2 cut(s) 65, 373
Hsp92II CATG 3 cut(s) 77, 181, 203
KroI GCCGGC 1 cut(s) 262
KroNI GCCGGC 1 cut(s) 264
Kzo9I GATC 3 cut(s) 163, 215, 278
LmnI GCTCC 1 cut(s) 536
LpnPI CCDG 7 cut(s) 137, 165, 219, 276, 366, 393, 582
MaeII ACGT 2 cut(s) 65, 373
MaeIII GTNAC 2 cut(s) 283, 447
MalI GATC 3 cut(s) 165, 217, 280
MboI GATC 3 cut(s) 163, 215, 278
MboII GAAGA 5 cut(s) 102, 343, 410, 623, 623
MfeI CAATTG 1 cut(s) 267
MflI RGATCY 1 cut(s) 278
MlsI TGGCCA 1 cut(s) 600
MluCI AATT 2 cut(s) 267, 490
MluNI TGGCCA 1 cut(s) 600
MmeI TCCRAC 1 cut(s) 672
MnlI CCTC 3 cut(s) 150, 196, 515
Mox20I TGGCCA 1 cut(s) 600
MroNI GCCGGC 1 cut(s) 262
MroXI GAANNNNTTC 1 cut(s) 630
MscI TGGCCA 1 cut(s) 600
MseI TTAA 2 cut(s) 618, 665
MslI CAYNNNNRTG 1 cut(s) 78
Msp20I TGGCCA 1 cut(s) 600
MspI CCGG 2 cut(s) 152, 263
MspR9I CCNGG 1 cut(s) 153
MunI CAATTG 1 cut(s) 267
NaeI GCCGGC 1 cut(s) 264
NciI CCSGG 1 cut(s) 153
NdeII GATC 3 cut(s) 163, 215, 278
NgoMIV GCCGGC 1 cut(s) 262
NlaIII CATG 3 cut(s) 77, 181, 203
NlaIV GGNNCC 1 cut(s) 532
NspV TTCGAA 1 cut(s) 396
PdiI GCCGGC 1 cut(s) 264
PdmI GAANNNNTTC 1 cut(s) 630
PmaCI CACGTG 1 cut(s) 66
PmlI CACGTG 1 cut(s) 66
Ppu21I YACGTR 1 cut(s) 66
PsiI TTATAA 1 cut(s) 540
PspCI CACGTG 1 cut(s) 66
PspFI CCCAGC 1 cut(s) 380
PspN4I GGNNCC 1 cut(s) 532
PsuI RGATCY 1 cut(s) 278
RseI CAYNNNNRTG 1 cut(s) 78
SaqAI TTAA 2 cut(s) 618, 665
Sau3AI GATC 3 cut(s) 163, 215, 278
ScrFI CCNGG 1 cut(s) 153
SfuI TTCGAA 1 cut(s) 396
SmiMI CAYNNNNRTG 1 cut(s) 78
Sse9I AATT 2 cut(s) 267, 490
SsiI CCGC 2 cut(s) 144, 480
SspI AATATT 1 cut(s) 362
StyD4I CCNGG 1 cut(s) 151
StyI CCWWGG 1 cut(s) 601
TaaI ACNGT 3 cut(s) 106, 289, 472
TaiI ACGT 2 cut(s) 68, 376
TaqI TCGA 2 cut(s) 396, 634
TasI AATT 2 cut(s) 267, 490
Tru1I TTAA 2 cut(s) 618, 665
Tru9I TTAA 2 cut(s) 618, 665
TspDTI ATGAA 6 cut(s) 344, 350, 354, 449, 579, 639
TspGWI ACGGA 1 cut(s) 523
XmiI GTMKAC 1 cut(s) 57
XmnI GAANNNNTTC 1 cut(s) 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.