RchiOBHm_Chr5g0035541

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
29442055 .. 29447516
5462 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31439

Sequence Viewer

Length: 2373 bp
ATGAGTTCCATTATCGAAGCGTTTATCAAGATATTACTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTTCCCTTGACGCCCTTAAGCCAGACCATCCAATCAGAGACGGTGACGTTTTAGTCTCTAGCACGCAAATCTTTGCACTAGGGTTTTTCAGCCCTGGAAATCCTCAGCACCGCTATGTTGGAGTTTGGTATAACAAAGTTCCAGAGCAAACCATTGTCTGGGTTGCGAACAGAGATAACCCAGTCAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAAGTACCCCTCTTTGGTCTGCAAACGTTACTCTATCTTCACCATACAATTTTACAGCCAAACTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATGGTAGCCAAAGAGTTGTGTGGGAAGGCTTCGATTACCCCTCAGATACAATGCTTTACTTTATGAAGATGGGGCTGAACCGGCGGTCTGGGTTGGAGTGCCACCTAACATCATGGAAGTCAAAAGATGACCCCGGAACCGGGAGTTATACATATGGGATAGACCCCATGGGGTTTCCGCAGCTGTTTCTGCACAAAGGTAGAGAAGCATCGTGGCGGGCCGGCCCTTGGATCGGGGACAGATTGAGCGCTCTACCTGTAATGACGGCTACCATCTACAATACAAGTTTTGTCAACAATGAAGACGAGATAACCTTAGTGTTTGCTGTTGCTAAGGACTCATTGATCACAAGGGTGGTGATAGATGAATCAGGAATATTACAAGTGTTCGTGTGGAATGATCAATGGATCAAATTCTCCTCCCACCCGACTGAGTGGTGTGATTACTATGGACAGTGTGGTCCAAATACTAACTGTGACTCAGAGAAGGACTATAAGTTGGCTTGCACGTGCCTACCTGGCTTCGAATCCAAATCACCTAGTTTGAGTGTTGGTAAGACTGGATGCATTAGGAAAGCGGGAGCATCCACATGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGCGTGTAAAATTACCGGACTCGTCTACGGCACATGTGAACATGAGTATGAGTTTGGAAGAGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCTCAGCTTACACGAGTGCGGATGACCGGGGAGGTGGGATTGGGTGTGTGACATGGCACGGGGACTTGATGGACATGAGGACTTTCTCCGATTTTGGTCAAGATTTATATGTTCGAGTCGATGTAACTTCTTTAGGTAAGCGTAGGCAAAATAAATATTCATTTGAACTTACTGCTCGGTCAACCTACTTCGAAGAAGCTGCTGGTGGATTAGTTCTTGATGATAGTAGAATAAACTTGGAGTTACTATTATTTCATCTAAACACCATAGCCACTGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCCCCGTTTATAAGGGGATACTTTATGATGGAAAAGAAATAGCAGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACATAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGGTGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCAATTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGCTTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATATTCAGAGGGGAGCAAACTGAAGCAAATACAAAACGTGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAGGGACTGTTTTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCAAAAAGAATGCTGGTTCCTATGAGAAGTATCCATATTCAAATTTGATTGGACATGTTTGGGAGCTGTGGAAAGAAGGCAGAGCTGTGAAAATCATTGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATAATAAGATGCATTCAAATCGCACTCCTGTGTGTGCAAGAATTTGCGACTGACCGGCCAACCATGTCGGCAGTTGTTTCAATGTTAAGTAATGATGCAGCTCTTCCTTCACCGAGACGACCCGCATTTTTACTGAAGACAATGAGTCCTAGTGGAGACTCATCCAGCAACAAAGGAGGTTGTTCAGTAAATGATGTCACATGTACAATCGTAGAAGCTCGCTAA

Protein Analysis

790

Amino Acids

87.82

Weight (kDa)

5.99

Isoelectric Point (pI)

41.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 3e-31 D-mannose binding lectin
S_locus_glycop PF00954 211 - 317 4.3e-23 S-locus glycoprotein domain
PAN_2 PF08276 337 - 403 8.8e-23 PAN-like domain
PK_Tyr_Ser-Thr PF07714 475 - 744 2.1e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 475 - 739 2.7e-42 Protein kinase domain
DUF3403 PF11883 746 - 790 5.4e-09 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1467
AasI GACNNNNNNGTC 2 cut(s) 125, 876
AccB7I CCANNNNNTGG 1 cut(s) 231
AccI GTMKAC 1 cut(s) 1064
AccII CGCG 1 cut(s) 1042
AciI CCGC 7 cut(s) 184, 502, 596, 634, 995, 1151, 2271
AclI AACGTT 1 cut(s) 348
AclWI GGATC 2 cut(s) 656, 833
AcoI YGGCCR 2 cut(s) 1525, 2204
AcsI RAATTY 3 cut(s) 830, 2056, 2189
AcuI CTGAAG 2 cut(s) 1908, 2303
AcvI CACGTG 1 cut(s) 927
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 2 cut(s) 328, 2353
AfeI AGCGCT 1 cut(s) 667
AfiI CCNNNNNNNGG 6 cut(s) 231, 336, 557, 558, 645, 650
AflII CTTAAG 1 cut(s) 89
AflIII ACRYGT 5 cut(s) 1007, 1072, 1903, 2068, 2348
AhdI GACNNNNNGTC 1 cut(s) 2292
AjnI CCWGG 2 cut(s) 166, 934
AjuI GAANNNNNNNTTGG 4 cut(s) 1422, 1437, 1454, 1469
AleI CACNNNNGTG 2 cut(s) 770, 2176
AluBI AGCT 9 cut(s) 73, 601, 1139, 1331, 1438, 2080, 2099, 2249, 2366
AluI AGCT 9 cut(s) 73, 601, 1139, 1331, 1438, 2080, 2099, 2249, 2366
Alw26I GTCTC 4 cut(s) 105, 133, 2257, 2298
AlwI GGATC 2 cut(s) 656, 833
Aor51HI AGCGCT 1 cut(s) 667
AoxI GGCC 7 cut(s) 298, 636, 640, 1456, 1525, 1803, 2204
ApeKI GCWGC 3 cut(s) 598, 1331, 2246
ApoI RAATTY 3 cut(s) 830, 2056, 2189
Asp700I GAANNNNTTC 1 cut(s) 1557
AspLEI GCGC 2 cut(s) 668, 1042
AspS9I GGNCC 5 cut(s) 319, 636, 641, 878, 1457
AsuC2I CCSGG 3 cut(s) 552, 559, 1160
AsuHPI GGTGA 9 cut(s) 128, 302, 354, 787, 945, 1631, 1923, 2138, 2250
AsuII TTCGAA 2 cut(s) 942, 1323
AvaII GGWCC 2 cut(s) 319, 878
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BalI TGGCCA 1 cut(s) 1527
BauI CACGAG 1 cut(s) 1144
BbrPI CACGTG 1 cut(s) 927
BbsI GAAGAC 2 cut(s) 726, 2291
BbvCI CCTCAGC 1 cut(s) 177
BbvI GCAGC 3 cut(s) 610, 1318, 2258
BccI CCATC 7 cut(s) 108, 287, 481, 698, 1114, 1195, 1478
BceAI ACGGC 2 cut(s) 699, 1083
BcgI CGANNNNNNTGC 4 cut(s) 1313, 1347, 2149, 2183
BciT130I CCWGG 2 cut(s) 168, 936
BciVI GTATCC 3 cut(s) 385, 1467, 2055
BclI TGATCA 2 cut(s) 762, 817
BcnI CCSGG 3 cut(s) 552, 559, 1160
BcoDI GTCTC 4 cut(s) 105, 133, 2257, 2298
BfaI CTAG 8 cut(s) 60, 132, 152, 957, 1743, 1863, 2000, 2298
BfmI CTRYAG 1 cut(s) 2121
BfoI RGCGCY 1 cut(s) 669
BfrI CTTAAG 1 cut(s) 89
BfuI GTATCC 3 cut(s) 385, 1467, 2055
BglI GCCNNNNNGGC 1 cut(s) 936
BglII AGATCT 1 cut(s) 1795
BisI GCNGC 3 cut(s) 599, 1332, 2247
BlpI GCTNAGC 1 cut(s) 1135
BlsI GCNGC 3 cut(s) 600, 1333, 2248
Bme1390I CCNGG 5 cut(s) 168, 552, 559, 936, 1160
Bme18I GGWCC 2 cut(s) 319, 878
BmeRI GACNNNNNGTC 1 cut(s) 2292
BmgT120I GGNCC 5 cut(s) 319, 636, 641, 878, 1457
BmiI GGNNCC 4 cut(s) 321, 556, 1459, 2032
BmrFI CCNGG 5 cut(s) 168, 552, 559, 936, 1160
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 5 cut(s) 635, 971, 1010, 2147, 2233
BmuI ACTGGG 1 cut(s) 248
BpiI GAAGAC 2 cut(s) 726, 2291
Bpu10I CCTNAGC 2 cut(s) 177, 750
Bpu1102I GCTNAGC 1 cut(s) 1135
Bpu14I TTCGAA 2 cut(s) 942, 1323
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 3 cut(s) 552, 559, 1160
Bsa29I ATCGAT 1 cut(s) 281
BsaAI YACGTR 1 cut(s) 927
BsaBI GATNNNNATC 1 cut(s) 1634
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 6 cut(s) 166, 550, 585, 644, 1159, 1528
BsaWI WCCGGW 2 cut(s) 1054, 1933
BsaXI ACNNNNNCTCC 6 cut(s) 288, 318, 1406, 1436, 1940, 1970
Bsc4I CCNNNNNNNGG 6 cut(s) 231, 336, 557, 558, 645, 650
Bse118I RCCGGY 3 cut(s) 498, 638, 2202
Bse1I ACTGG 3 cut(s) 254, 982, 2017
Bse3DI GCAATG 2 cut(s) 1816, 1950
Bse8I GATNNNNATC 1 cut(s) 1634
BseBI CCWGG 2 cut(s) 168, 936
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 6 cut(s) 166, 550, 585, 644, 1159, 1528
BseGI GGATG 5 cut(s) 100, 986, 1001, 1159, 2309
BseJI GATNNNNATC 1 cut(s) 1634
BseLI CCNNNNNNNGG 6 cut(s) 231, 336, 557, 558, 645, 650
BseMI GCAATG 2 cut(s) 1816, 1950
BseMII CTCAG 5 cut(s) 191, 474, 840, 912, 1149
BseNI ACTGG 3 cut(s) 254, 982, 2017
BseRI GAGGAG 1 cut(s) 826
BseXI GCAGC 3 cut(s) 610, 1318, 2258
BsgI GTGCAG 1 cut(s) 593
Bsh1236I CGCG 1 cut(s) 1042
BshFI GGCC 7 cut(s) 300, 638, 642, 1458, 1527, 1805, 2206
BshVI ATCGAT 1 cut(s) 281
BsiSI CCGG 8 cut(s) 499, 552, 558, 639, 1055, 1159, 1934, 2203
BslFI GGGAC 3 cut(s) 668, 1208, 1965
BslI CCNNNNNNNGG 6 cut(s) 231, 336, 557, 558, 645, 650
BsmAI GTCTC 4 cut(s) 105, 133, 2257, 2298
BsmBI CGTCTC 2 cut(s) 105, 2257
BsmFI GGGAC 3 cut(s) 668, 1208, 1965
BsmI GAATGC 2 cut(s) 2029, 2160
BsnI GGCC 7 cut(s) 300, 638, 642, 1458, 1527, 1805, 2206
Bsp119I TTCGAA 2 cut(s) 942, 1323
Bsp1407I TGTACA 1 cut(s) 2351
Bsp143I GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
Bsp1720I GCTNAGC 1 cut(s) 1135
Bsp19I CCATGG 1 cut(s) 585
BspACI CCGC 7 cut(s) 184, 502, 596, 634, 995, 1151, 2271
BspANI GGCC 7 cut(s) 300, 638, 642, 1458, 1527, 1805, 2206
BspCNI CTCAG 5 cut(s) 190, 473, 841, 911, 1148
BspDI ATCGAT 1 cut(s) 281
BspFNI CGCG 1 cut(s) 1042
BspHI TCATGA 1 cut(s) 1762
BspLI GGNNCC 4 cut(s) 321, 556, 1459, 2032
BspPI GGATC 2 cut(s) 656, 833
BspQI GCTCTTC 1 cut(s) 2256
BspT104I TTCGAA 2 cut(s) 942, 1323
BspTI CTTAAG 1 cut(s) 89
BsrDI GCAATG 2 cut(s) 1816, 1950
BsrFI RCCGGY 3 cut(s) 498, 638, 2202
BsrGI TGTACA 1 cut(s) 2351
BsrI ACTGG 3 cut(s) 254, 982, 2017
BssAI RCCGGY 3 cut(s) 498, 638, 2202
BssECI CCNNGG 6 cut(s) 166, 550, 585, 644, 1159, 1528
BssMI GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 1 cut(s) 1144
BssT1I CCWWGG 3 cut(s) 585, 644, 1528
Bst2BI CACGAG 1 cut(s) 1144
Bst2UI CCWGG 2 cut(s) 168, 936
Bst4CI ACNGT 4 cut(s) 116, 873, 893, 1956
Bst6I CTCTTC 5 cut(s) 47, 1092, 1533, 1617, 2256
BstACI GRCGYC 1 cut(s) 84
BstAFI CTTAAG 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 2351
BstBAI YACGTR 1 cut(s) 927
BstBI TTCGAA 2 cut(s) 942, 1323
BstC8I GCNNGC 7 cut(s) 71, 137, 636, 640, 922, 1807, 2368
BstDEI CTNAG 8 cut(s) 177, 460, 733, 750, 849, 898, 1135, 1778
BstDSI CCRYGG 1 cut(s) 585
BstF5I GGATG 5 cut(s) 100, 986, 1001, 1159, 2309
BstFNI CGCG 1 cut(s) 1042
BstH2I RGCGCY 1 cut(s) 669
BstHHI GCGC 2 cut(s) 668, 1042
BstKTI GATC 6 cut(s) 285, 651, 765, 820, 828, 1798
BstMAI GTCTC 4 cut(s) 105, 133, 2257, 2298
BstMBI GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
BstMWI GCNNNNNNNGC 3 cut(s) 499, 607, 936
BstNI CCWGG 2 cut(s) 168, 936
BstNSI RCATGY 4 cut(s) 1011, 1076, 2072, 2352
BstSCI CCNGG 5 cut(s) 166, 550, 557, 934, 1158
BstSFI CTRYAG 1 cut(s) 2121
BstUI CGCG 1 cut(s) 1042
BstV1I GCAGC 3 cut(s) 610, 1318, 2258
BstV2I GAAGAC 2 cut(s) 726, 2291
BstX2I RGATCY 1 cut(s) 1795
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 1 cut(s) 1795
Bsu15I ATCGAT 1 cut(s) 281
BsuI GTATCC 3 cut(s) 385, 1467, 2055
BsuRI GGCC 7 cut(s) 300, 638, 642, 1458, 1527, 1805, 2206
BsuTUI ATCGAT 1 cut(s) 281
BtgI CCRYGG 1 cut(s) 585
BtsCI GGATG 5 cut(s) 100, 986, 1001, 1159, 2309
BtsI GCAGTG 1 cut(s) 1404
BtsIMutI CAGTG 2 cut(s) 878, 1404
Cac8I GCNNGC 7 cut(s) 71, 137, 636, 640, 922, 1807, 2368
CciI TCATGA 1 cut(s) 1762
CfoI GCGC 2 cut(s) 668, 1042
Cfr10I RCCGGY 3 cut(s) 498, 638, 2202
Cfr13I GGNCC 5 cut(s) 319, 636, 641, 878, 1457
ClaI ATCGAT 1 cut(s) 281
CseI GACGC 2 cut(s) 92, 1725
Csp6I GTAC 2 cut(s) 327, 2352
CspCI CAANNNNNGTGG 2 cut(s) 1887, 1922
CviQI GTAC 2 cut(s) 327, 2352
DdeI CTNAG 8 cut(s) 177, 460, 733, 750, 849, 898, 1135, 1778
DpnI GATC 6 cut(s) 284, 650, 764, 819, 827, 1797
DpnII GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
DrdI GACNNNNNNGTC 2 cut(s) 125, 876
DriI GACNNNNNGTC 1 cut(s) 2292
DseDI GACNNNNNNGTC 2 cut(s) 125, 876
EaeI YGGCCR 2 cut(s) 1525, 2204
Eam1104I CTCTTC 5 cut(s) 47, 1092, 1533, 1617, 2256
Eam1105I GACNNNNNGTC 1 cut(s) 2292
EarI CTCTTC 5 cut(s) 47, 1092, 1533, 1617, 2256
Eco130I CCWWGG 3 cut(s) 585, 644, 1528
Eco147I AGGCCT 1 cut(s) 300
Eco47I GGWCC 2 cut(s) 319, 878
Eco47III AGCGCT 1 cut(s) 667
Eco57I CTGAAG 2 cut(s) 1908, 2303
Eco72I CACGTG 1 cut(s) 927
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 2 cut(s) 166, 934
EcoT14I CCWWGG 3 cut(s) 585, 644, 1528
EcoT22I ATGCAT 2 cut(s) 986, 2162
ErhI CCWWGG 3 cut(s) 585, 644, 1528
Esp3I CGTCTC 2 cut(s) 105, 2257
FaqI GGGAC 3 cut(s) 668, 1208, 1965
FauI CCCGC 3 cut(s) 627, 988, 2278
FauNDI CATATG 2 cut(s) 571, 1918
FbaI TGATCA 2 cut(s) 762, 817
FblI GTMKAC 1 cut(s) 1064
Fnu4HI GCNGC 3 cut(s) 599, 1332, 2247
FokI GGATG 5 cut(s) 87, 988, 993, 1166, 2296
FseI GGCCGGCC 1 cut(s) 642
Fsp4HI GCNGC 3 cut(s) 599, 1332, 2247
FspBI CTAG 8 cut(s) 60, 132, 152, 957, 1743, 1863, 2000, 2298
GlaI GCGC 2 cut(s) 667, 1041
GluI GCNGC 3 cut(s) 599, 1332, 2247
HaeII RGCGCY 1 cut(s) 669
HaeIII GGCC 7 cut(s) 300, 638, 642, 1458, 1527, 1805, 2206
HapII CCGG 8 cut(s) 499, 552, 558, 639, 1055, 1159, 1934, 2203
HgaI GACGC 2 cut(s) 92, 1725
HhaI GCGC 2 cut(s) 668, 1042
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 2 cut(s) 666, 1040
HinP1I GCGC 2 cut(s) 666, 1040
HincII GTYRAC 2 cut(s) 712, 1314
HindII GTYRAC 2 cut(s) 712, 1314
HindIII AAGCTT 1 cut(s) 1436
HpaII CCGG 8 cut(s) 499, 552, 558, 639, 1055, 1159, 1934, 2203
HphI GGTGA 9 cut(s) 128, 302, 354, 787, 945, 1631, 1923, 2138, 2250
Hpy166II GTNNAC 4 cut(s) 712, 1065, 1078, 1314
Hpy188I TCNGA 7 cut(s) 110, 463, 901, 1222, 1563, 1874, 1972
Hpy188III TCNNGA 9 cut(s) 28, 215, 789, 1030, 1232, 1349, 1723, 1763, 1773
Hpy8I GTNNAC 4 cut(s) 712, 1065, 1078, 1314
HpyAV CCTTC 9 cut(s) 56, 437, 898, 1016, 1027, 1439, 1610, 2084, 2265
HpyCH4III ACNGT 4 cut(s) 116, 873, 893, 1956
HpyCH4IV ACGT 4 cut(s) 120, 348, 926, 1903
HpyF10VI GCNNNNNNNGC 3 cut(s) 499, 607, 936
HpyF3I CTNAG 8 cut(s) 177, 460, 733, 750, 849, 898, 1135, 1778
HpySE526I ACGT 4 cut(s) 120, 348, 926, 1903
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 2 cut(s) 666, 1040
KroI GCCGGC 1 cut(s) 638
KroNI GCCGGC 1 cut(s) 640
Ksp22I TGATCA 2 cut(s) 762, 817
Kzo9I GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
LguI GCTCTTC 1 cut(s) 2256
LmnI GCTCC 3 cut(s) 998, 1879, 2077
Lsp1109I GCAGC 3 cut(s) 610, 1318, 2258
LweI GCATC 5 cut(s) 635, 971, 1010, 2147, 2233
MaeI CTAG 8 cut(s) 60, 132, 152, 957, 1743, 1863, 2000, 2298
MaeII ACGT 4 cut(s) 120, 348, 926, 1903
MaeIII GTNAC 8 cut(s) 116, 349, 893, 1180, 1255, 1374, 1929, 2344
MalI GATC 6 cut(s) 284, 650, 764, 819, 827, 1797
MboI GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
MflI RGATCY 1 cut(s) 1795
MlsI TGGCCA 1 cut(s) 1527
MluCI AATT 9 cut(s) 370, 830, 1049, 1417, 1698, 1782, 1825, 2056, 2189
MluNI TGGCCA 1 cut(s) 1527
MlyI GAGTC 7 cut(s) 749, 890, 1052, 1257, 1661, 2300, 2302
MmeI TCCRAC 5 cut(s) 172, 492, 1600, 1688, 1891
Mox20I TGGCCA 1 cut(s) 1527
Mph1103I ATGCAT 2 cut(s) 986, 2162
MroNI GCCGGC 1 cut(s) 638
MroXI GAANNNNTTC 1 cut(s) 1557
MscI TGGCCA 1 cut(s) 1527
MseI TTAA 6 cut(s) 90, 1545, 1593, 1680, 1703, 2234
MslI CAYNNNNRTG 5 cut(s) 186, 770, 1006, 1085, 2176
Msp20I TGGCCA 1 cut(s) 1527
MspA1I CMGCKG 1 cut(s) 601
MspCI CTTAAG 1 cut(s) 89
MspI CCGG 8 cut(s) 499, 552, 558, 639, 1055, 1159, 1934, 2203
MspR9I CCNGG 5 cut(s) 168, 552, 559, 936, 1160
Mva1269I GAATGC 2 cut(s) 2029, 2160
MvaI CCWGG 2 cut(s) 168, 936
MvnI CGCG 1 cut(s) 1042
MwoI GCNNNNNNNGC 3 cut(s) 499, 607, 936
NaeI GCCGGC 1 cut(s) 640
NciI CCSGG 3 cut(s) 552, 559, 1160
NcoI CCATGG 1 cut(s) 585
NdeI CATATG 2 cut(s) 571, 1918
NdeII GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
NgoMIV GCCGGC 1 cut(s) 638
NlaIV GGNNCC 4 cut(s) 321, 556, 1459, 2032
NmuCI GTSAC 5 cut(s) 116, 893, 1180, 1929, 2344
NsiI ATGCAT 2 cut(s) 986, 2162
NspI RCATGY 4 cut(s) 1011, 1076, 2072, 2352
NspV TTCGAA 2 cut(s) 942, 1323
OliI CACNNNNGTG 2 cut(s) 770, 2176
PagI TCATGA 1 cut(s) 1762
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 4 cut(s) 1007, 1072, 2068, 2348
PciSI GCTCTTC 1 cut(s) 2256
PctI GAATGC 2 cut(s) 2029, 2160
PdiI GCCGGC 1 cut(s) 640
PdmI GAANNNNTTC 1 cut(s) 1557
PfeI GAWTC 7 cut(s) 263, 785, 944, 1630, 1769, 2114, 2129
PflMI CCANNNNNTGG 1 cut(s) 231
PkrI GCNGC 3 cut(s) 600, 1333, 2248
PleI GAGTC 7 cut(s) 749, 890, 1052, 1256, 1661, 2300, 2301
PmaCI CACGTG 1 cut(s) 927
PmlI CACGTG 1 cut(s) 927
PpsI GAGTC 7 cut(s) 749, 890, 1052, 1256, 1661, 2300, 2301
Ppu21I YACGTR 1 cut(s) 927
PpuMI RGGWCCY 1 cut(s) 319
PscI ACATGT 4 cut(s) 1007, 1072, 2068, 2348
PsiI TTATAA 1 cut(s) 1467
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 2 cut(s) 166, 934
PspCI CACGTG 1 cut(s) 927
PspGI CCWGG 2 cut(s) 166, 934
PspN4I GGNNCC 4 cut(s) 321, 556, 1459, 2032
PspPI GGNCC 5 cut(s) 319, 636, 641, 878, 1457
PspPPI RGGWCCY 1 cut(s) 319
PsuI RGATCY 1 cut(s) 1795
PvuII CAGCTG 1 cut(s) 601
RigI GGCCGGCC 1 cut(s) 642
RsaI GTAC 2 cut(s) 328, 2353
RsaNI GTAC 2 cut(s) 327, 2352
RseI CAYNNNNRTG 5 cut(s) 186, 770, 1006, 1085, 2176
SapI GCTCTTC 1 cut(s) 2256
SaqAI TTAA 6 cut(s) 90, 1545, 1593, 1680, 1703, 2234
SatI GCNGC 3 cut(s) 599, 1332, 2247
Sau3AI GATC 6 cut(s) 282, 648, 762, 817, 825, 1795
Sau96I GGNCC 5 cut(s) 319, 636, 641, 878, 1457
SchI GAGTC 7 cut(s) 749, 890, 1052, 1257, 1661, 2300, 2302
ScrFI CCNGG 5 cut(s) 168, 552, 559, 936, 1160
SfaNI GCATC 5 cut(s) 635, 971, 1010, 2147, 2233
SfcI CTRYAG 1 cut(s) 2121
SfuI TTCGAA 2 cut(s) 942, 1323
SinI GGWCC 2 cut(s) 319, 878
SmiMI CAYNNNNRTG 5 cut(s) 186, 770, 1006, 1085, 2176
SmlI CTYRAG 2 cut(s) 89, 413
SmoI CTYRAG 2 cut(s) 89, 413
Sse9I AATT 9 cut(s) 370, 830, 1049, 1417, 1698, 1782, 1825, 2056, 2189
SseBI AGGCCT 1 cut(s) 300
SsiI CCGC 7 cut(s) 184, 502, 596, 634, 995, 1151, 2271
SspI AATATT 3 cut(s) 795, 1289, 1869
SspMI CTAG 8 cut(s) 60, 132, 152, 957, 1743, 1863, 2000, 2298
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 5 cut(s) 166, 550, 557, 934, 1158
StyI CCWWGG 3 cut(s) 585, 644, 1528
TaaI ACNGT 4 cut(s) 116, 873, 893, 1956
TaiI ACGT 4 cut(s) 123, 351, 929, 1906
TaqI TCGA 8 cut(s) 15, 281, 450, 942, 1246, 1251, 1323, 1722
TaqII GACCGA 1 cut(s) 1299
TasI AATT 9 cut(s) 370, 830, 1049, 1417, 1698, 1782, 1825, 2056, 2189
TatI WGTACW 1 cut(s) 2351
TfiI GAWTC 7 cut(s) 263, 785, 944, 1630, 1769, 2114, 2129
Tru1I TTAA 6 cut(s) 90, 1545, 1593, 1680, 1703, 2234
Tru9I TTAA 6 cut(s) 90, 1545, 1593, 1680, 1703, 2234
TscAI CASTG 2 cut(s) 878, 1411
TseFI GTSAC 5 cut(s) 116, 893, 1180, 1929, 2344
TseI GCWGC 3 cut(s) 598, 1331, 2246
Tsp45I GTSAC 5 cut(s) 116, 893, 1180, 1929, 2344
TspRI CASTG 2 cut(s) 878, 1411
Van91I CCANNNNNTGG 1 cut(s) 231
Vha464I CTTAAG 1 cut(s) 89
VpaK11BI GGWCC 2 cut(s) 319, 878
XapI RAATTY 3 cut(s) 830, 2056, 2189
XceI RCATGY 4 cut(s) 1011, 1076, 2072, 2352
XmiI GTMKAC 1 cut(s) 1064
XmnI GAANNNNTTC 1 cut(s) 1557
XspI CTAG 8 cut(s) 60, 132, 152, 957, 1743, 1863, 2000, 2298
Zsp2I ATGCAT 2 cut(s) 986, 2162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.