RchiOBHm_Chr5g0066181

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000099
Physical Location & Seq
Forward (+)
72316511 .. 72320750
4240 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34197

Sequence Viewer

Length: 2481 bp
ATGAGTTCCAGTATCGAAGTGTTTATCCAGACATTGCTTCTCTTCCTTCTTCTCCCCTCTAGCATTTGCCAGCTTCCCCTTGACGCCCTTACGCCAGACCGTCCCATCAGAGACGGTGACATTTTAGTCTCTAACAAGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAATTCTCTGCACCGCTACGCTGGAGTTTGGTATAACAAGATTCCAGAGAAAACTATTGTCTGGGTTGCAAACAGAGACAACCCAGTCAATGATTCCTATGGAGTGCTATCCATCAACGGTGATGGAGGCCTTGTCATACATGGAAAGGACCCAAGTACCCCTCTTTGGTCCGCAAACGTTTGTCTCTCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATAGTGGCGAAAGAGTTGTGTGGGAAGGCTTTGATTACCCCTCAGATACACAACTTCCCTTTATGAAGATTGGGCTGAACCGGCGGTCCCGGTTGGAGAAGCACCTAACATCTTGGAAATCAAAAGATGACCCGGGAACCGGGAGTTGTACATGTGGGATAGACCCAATAGGGGTTCCGCAGTTTTTTCTGCGCAAGGGTAGAGAAGCACTATGGCGGGCCGGCCCTTGGACTGGGCACAAATTCAGCGGTACCGTTGGAAACTACAATTCAAGTATTGTCAACAATGAAGACGAGATATCCTTCGTGTATTTTGTTGCTGGGGACTCAGTGATCTCAAGGATGGTCATAGATGAATCAGGAATACTTCAAGGGTTCGTGTGGAATGATCAATGGATCAAATTCTACTACTACCCGACTGGGTGGTGTGATTCCTATGGACAGTGCGGTCCAAATACTAACTGTGACCCAGACAAGGACTATAAGTTGGCTTGCACATGCCTACCTGGGTTCGAATCCAAATCACCTAGTTTGAGTCTTGGTGAGGGTGGGTGCATTAGGAAAGTGGAAGCGTCCACATGTCAAGATGGAGAAGGGTTCGTGAAGGTGGCGAGTGTAAAAATACCGGACTCGTCTACGGCACGTGTGAACATGAGCATGAGTTTGGAATTGTGCAGACAAAAGTGCTTGATAGATTGTTCTTGCACAGCTTACATGAGTGTGGAGGACCGGGGAGGTGGGATCAGGTGTGTGACATGGCACGGGGACTTGATGGATGTGAGGACTTTCTCCGATGGTCAAGATTTATATGTTCGAGTCGATGCAACTTCTTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAAAAGGCATGGCTGGCAATTTCACTTGGATCTGTTACAGTTTTTATTGTCTTACTTACCCTTTATTGGTTGGTAAAGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAAAATTCATTTGAACTTATTGCTGGGTCAACCTACTTTGAAGAAGTTACTGGTGGATTAGCTTTTGATGATAGTAGAATAAACTCGGAGTTACTATTATTTCATCTCAACACCGTAGCCACCGCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGGTTTGGCTCCGTTTATAAGGGGATACTTTACGATGGAAAGGAAATAGCCGTAAAAAGACTATCCAAGTTTTCTGGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAAGTCCAACACAGAAACCTTGTTAAGATTTTAGGTTGTTGTTTTGAAGATGAAGAGAAGATTCTAGTCTATGAATACTTGCCCAAAAAAAGTTTGGACTCTTTCATCTTTAATGAAACAAGGAGAGCACTTTTAAGTTGGACAAGACGCTTCGAGATTATCTTGGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCAAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACGCAAAGATTGCAGATTTTGGTATGGCTAGAATATTTAGAGGGGAGCAAACTGAAGCAAATACAAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATATGCAATGGAAGGACTGTATTCAATAAAGTCTGATGTGTATAGTTTTGGTGTTTTATTGCTAGAAATCATTACTGGCAAAAAGAATGCTGGTTCCTATGAGAAGTATCCATATTCAAATTTGATTGGACATGTTTGGGAGTTGTGGAAAGAAGGCAGAGCCGTGGAAATCATTGATTCATCTATAGGTGAATCTTACCCTGTTAGTGAAATTATAAGGTGCATTCAAATTGCACTCCTGTGTGTGCAAGAATTTGCGACTGATCGGCCAACCATGTCAGTAGTTGTTTCAATGTTAAGTAATGATTCAGCTCTTCCTTCACCAAGACGACCCGCATTTTTACTGAAGACAATGAGCCCTAGTGGAGACCCATCCAGCAACAAAAGAGTTTGTTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

826

Amino Acids

91.84

Weight (kDa)

6.43

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 179 8.1e-32 D-mannose binding lectin
S_locus_glycop PF00954 211 - 313 2.3e-19 S-locus glycoprotein domain
PAN_2 PF08276 333 - 399 4.8e-20 PAN-like domain
PK_Tyr_Ser-Thr PF07714 511 - 780 1.1e-48 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 511 - 713 5.1e-44 Protein kinase domain
DUF3403 PF11883 782 - 826 1.7e-08 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1575, 2261
AasI GACNNNNNNGTC 3 cut(s) 125, 254, 864
Acc16I TGCGCA 1 cut(s) 611
Acc65I GGTACC 1 cut(s) 668
AccB1I GGYRCC 1 cut(s) 668
AccI GTMKAC 1 cut(s) 1052
AciI CCGC 9 cut(s) 184, 342, 502, 596, 634, 666, 864, 1515, 2379
AclI AACGTT 1 cut(s) 348
AclWI GGATC 3 cut(s) 821, 1166, 1321
AcoI YGGCCR 2 cut(s) 1633, 2312
AcsI RAATTY 6 cut(s) 172, 659, 818, 1396, 2164, 2297
AcuI CTGAAG 3 cut(s) 145, 2016, 2411
AcvI CACGTG 1 cut(s) 1061
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 4 cut(s) 328, 568, 670, 2461
AfiI CCNNNNNNNGG 7 cut(s) 336, 557, 589, 645, 650, 892, 1350
AflIII ACRYGT 5 cut(s) 569, 995, 1060, 2176, 2456
AjnI CCWGG 1 cut(s) 922
AjuI GAANNNNNNNTTGG 4 cut(s) 1530, 1545, 1562, 1577
AleI CACNNNNGTG 1 cut(s) 2284
AloI GAACNNNNNNTCC 2 cut(s) 488, 520
AluBI AGCT 8 cut(s) 73, 385, 1127, 1253, 1454, 1546, 2357, 2474
AluI AGCT 8 cut(s) 73, 385, 1127, 1253, 1454, 1546, 2357, 2474
Alw21I GWGCWC 1 cut(s) 1807
Alw26I GTCTC 5 cut(s) 105, 133, 240, 359, 2406
AlwI GGATC 3 cut(s) 821, 1166, 1321
Ama87I CYCGRG 1 cut(s) 550
AoxI GGCC 6 cut(s) 298, 636, 640, 1633, 1911, 2312
ApoI RAATTY 6 cut(s) 172, 659, 818, 1396, 2164, 2297
Asp700I GAANNNNTTC 1 cut(s) 1665
Asp718I GGTACC 1 cut(s) 668
AspLEI GCGC 1 cut(s) 612
AspS9I GGNCC 7 cut(s) 319, 339, 504, 636, 641, 866, 1144
AsuC2I CCSGG 6 cut(s) 168, 508, 551, 552, 559, 1148
AsuHPI GGTGA 8 cut(s) 128, 302, 354, 933, 971, 2031, 2246, 2358
AsuII TTCGAA 1 cut(s) 930
AvaI CYCGRG 1 cut(s) 550
AvaII GGWCC 5 cut(s) 319, 339, 504, 866, 1144
BaeGI GKGCMC 1 cut(s) 657
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BalI TGGCCA 1 cut(s) 1635
BanI GGYRCC 1 cut(s) 668
BanII GRGCYC 1 cut(s) 2405
BbrPI CACGTG 1 cut(s) 1061
BbsI GAAGAC 2 cut(s) 714, 2399
Bbv12I GWGCWC 1 cut(s) 1807
BccI CCATC 9 cut(s) 113, 287, 290, 754, 998, 1183, 1205, 1586, 2425
BceAI ACGGC 3 cut(s) 1071, 1592, 2192
BciT130I CCWGG 1 cut(s) 924
BciVI GTATCC 3 cut(s) 385, 1575, 2163
BclI TGATCA 1 cut(s) 805
BcnI CCSGG 6 cut(s) 168, 508, 551, 552, 559, 1148
BcoDI GTCTC 5 cut(s) 105, 133, 240, 359, 2406
BfaI CTAG 9 cut(s) 60, 152, 945, 1742, 1851, 1971, 2108, 2406, 2479
BfmI CTRYAG 1 cut(s) 2229
BfuI GTATCC 3 cut(s) 385, 1575, 2163
BglII AGATCT 1 cut(s) 1903
Bme1390I CCNGG 7 cut(s) 168, 508, 551, 552, 559, 924, 1148
Bme18I GGWCC 5 cut(s) 319, 339, 504, 866, 1144
BmeT110I CYCGRG 1 cut(s) 550
BmgT120I GGNCC 7 cut(s) 319, 339, 504, 636, 641, 866, 1144
BmiI GGNNCC 7 cut(s) 321, 506, 556, 594, 670, 1567, 2140
BmrFI CCNGG 7 cut(s) 168, 508, 551, 552, 559, 924, 1148
BmrI ACTGGG 3 cut(s) 248, 660, 846
BmsI GCATC 1 cut(s) 1228
BmuI ACTGGG 3 cut(s) 248, 660, 846
BpiI GAAGAC 2 cut(s) 714, 2399
BpmI CTGGAG 1 cut(s) 213
Bpu14I TTCGAA 1 cut(s) 930
BpuEI CTTGAG 2 cut(s) 434, 739
BpuMI CCSGG 6 cut(s) 168, 508, 551, 552, 559, 1148
BsaAI YACGTR 1 cut(s) 1061
BsaHI GRCGYC 1 cut(s) 84
BsaI GGTCTC 1 cut(s) 2406
BsaJI CCNNGG 7 cut(s) 166, 550, 644, 923, 1147, 1636, 2208
BsaWI WCCGGW 1 cut(s) 1042
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 1514, 1544
Bsc4I CCNNNNNNNGG 7 cut(s) 336, 557, 589, 645, 650, 892, 1350
Bse118I RCCGGY 2 cut(s) 498, 638
Bse1I ACTGG 6 cut(s) 9, 254, 655, 841, 1447, 2125
Bse3DI GCAATG 3 cut(s) 32, 1924, 2058
BseBI CCWGG 1 cut(s) 924
BseDI CCNNGG 7 cut(s) 166, 550, 644, 923, 1147, 1636, 2208
BseGI GGATG 3 cut(s) 765, 1198, 2417
BseLI CCNNNNNNNGG 7 cut(s) 336, 557, 589, 645, 650, 892, 1350
BseMI GCAATG 3 cut(s) 32, 1924, 2058
BseMII CTCAG 2 cut(s) 474, 759
BseNI ACTGG 6 cut(s) 9, 254, 655, 841, 1447, 2125
BseSI GKGCMC 1 cut(s) 657
BseYI CCCAGC 2 cut(s) 737, 1415
BsgI GTGCAG 2 cut(s) 164, 1111
BshFI GGCC 6 cut(s) 300, 638, 642, 1635, 1913, 2314
BshNI GGYRCC 1 cut(s) 668
BsiHKAI GWGCWC 1 cut(s) 1807
BsiHKCI CYCGRG 1 cut(s) 550
BsiSI CCGG 8 cut(s) 168, 499, 508, 551, 558, 639, 1043, 1147
BslFI GGGAC 4 cut(s) 87, 490, 755, 1196
BslI CCNNNNNNNGG 7 cut(s) 336, 557, 589, 645, 650, 892, 1350
BsmAI GTCTC 5 cut(s) 105, 133, 240, 359, 2406
BsmBI CGTCTC 1 cut(s) 105
BsmFI GGGAC 4 cut(s) 87, 490, 755, 1196
BsmI GAATGC 2 cut(s) 2137, 2268
BsnI GGCC 6 cut(s) 300, 638, 642, 1635, 1913, 2314
Bso31I GGTCTC 1 cut(s) 2406
BsoBI CYCGRG 1 cut(s) 550
Bsp119I TTCGAA 1 cut(s) 930
Bsp1286I GDGCHC 3 cut(s) 657, 1807, 2405
Bsp1407I TGTACA 2 cut(s) 566, 2459
Bsp143I GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
BspACI CCGC 9 cut(s) 184, 342, 502, 596, 634, 666, 864, 1515, 2379
BspANI GGCC 6 cut(s) 300, 638, 642, 1635, 1913, 2314
BspCNI CTCAG 2 cut(s) 473, 758
BspHI TCATGA 1 cut(s) 1870
BspLI GGNNCC 7 cut(s) 321, 506, 556, 594, 670, 1567, 2140
BspPI GGATC 3 cut(s) 821, 1166, 1321
BspQI GCTCTTC 1 cut(s) 2364
BspT104I TTCGAA 1 cut(s) 930
BspT107I GGYRCC 1 cut(s) 668
BspTNI GGTCTC 1 cut(s) 2406
BsrDI GCAATG 3 cut(s) 32, 1924, 2058
BsrFI RCCGGY 2 cut(s) 498, 638
BsrGI TGTACA 2 cut(s) 566, 2459
BsrI ACTGG 6 cut(s) 9, 254, 655, 841, 1447, 2125
BssAI RCCGGY 2 cut(s) 498, 638
BssECI CCNNGG 7 cut(s) 166, 550, 644, 923, 1147, 1636, 2208
BssMI GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
BssNI GRCGYC 1 cut(s) 84
BssT1I CCWWGG 2 cut(s) 644, 1636
Bst2UI CCWGG 1 cut(s) 924
Bst4CI ACNGT 9 cut(s) 101, 116, 290, 673, 861, 881, 1324, 1507, 2064
Bst6I CTCTTC 5 cut(s) 47, 364, 1641, 1725, 2364
BstACI GRCGYC 1 cut(s) 84
BstAPI GCANNNNNTGC 1 cut(s) 1952
BstAUI TGTACA 2 cut(s) 566, 2459
BstBAI YACGTR 1 cut(s) 1061
BstBI TTCGAA 1 cut(s) 930
BstC8I GCNNGC 7 cut(s) 71, 636, 640, 910, 1299, 1915, 2476
BstDEI CTNAG 4 cut(s) 460, 745, 1280, 1886
BstDSI CCRYGG 1 cut(s) 2208
BstF5I GGATG 3 cut(s) 765, 1198, 2417
BstHHI GCGC 1 cut(s) 612
BstKTI GATC 7 cut(s) 753, 808, 816, 1161, 1316, 1906, 2311
BstMAI GTCTC 5 cut(s) 105, 133, 240, 359, 2406
BstMBI GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
BstMWI GCNNNNNNNGC 4 cut(s) 499, 1259, 1298, 1952
BstNI CCWGG 1 cut(s) 924
BstNSI RCATGY 5 cut(s) 573, 918, 999, 2180, 2460
BstSCI CCNGG 7 cut(s) 166, 506, 549, 550, 557, 922, 1146
BstSFI CTRYAG 1 cut(s) 2229
BstSLI GKGCMC 1 cut(s) 657
BstV2I GAAGAC 2 cut(s) 714, 2399
BstX2I RGATCY 2 cut(s) 1313, 1903
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 2 cut(s) 1313, 1903
BsuI GTATCC 3 cut(s) 385, 1575, 2163
BsuRI GGCC 6 cut(s) 300, 638, 642, 1635, 1913, 2314
BtgI CCRYGG 1 cut(s) 2208
BtsCI GGATG 3 cut(s) 765, 1198, 2417
BtsIMutI CAGTG 2 cut(s) 753, 866
Cac8I GCNNGC 7 cut(s) 71, 636, 640, 910, 1299, 1915, 2476
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 1 cut(s) 612
Cfr10I RCCGGY 2 cut(s) 498, 638
Cfr13I GGNCC 7 cut(s) 319, 339, 504, 636, 641, 866, 1144
Cfr9I CCCGGG 1 cut(s) 550
CseI GACGC 3 cut(s) 92, 978, 1833
Csp6I GTAC 4 cut(s) 327, 567, 669, 2460
CspCI CAANNNNNGTGG 2 cut(s) 1995, 2030
CviQI GTAC 4 cut(s) 327, 567, 669, 2460
DdeI CTNAG 4 cut(s) 460, 745, 1280, 1886
DpnI GATC 7 cut(s) 752, 807, 815, 1160, 1315, 1905, 2310
DpnII GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
DrdI GACNNNNNNGTC 3 cut(s) 125, 254, 864
DseDI GACNNNNNNGTC 3 cut(s) 125, 254, 864
EaeI YGGCCR 2 cut(s) 1633, 2312
Eam1104I CTCTTC 5 cut(s) 47, 364, 1641, 1725, 2364
EarI CTCTTC 5 cut(s) 47, 364, 1641, 1725, 2364
Eco130I CCWWGG 2 cut(s) 644, 1636
Eco147I AGGCCT 1 cut(s) 300
Eco24I GRGCYC 1 cut(s) 2405
Eco31I GGTCTC 1 cut(s) 2406
Eco32I GATATC 1 cut(s) 717
Eco47I GGWCC 5 cut(s) 319, 339, 504, 866, 1144
Eco57I CTGAAG 3 cut(s) 145, 2016, 2411
Eco72I CACGTG 1 cut(s) 1061
Eco88I CYCGRG 1 cut(s) 550
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 1 cut(s) 922
EcoRV GATATC 1 cut(s) 717
EcoT14I CCWWGG 2 cut(s) 644, 1636
EcoT38I GRGCYC 1 cut(s) 2405
ErhI CCWWGG 2 cut(s) 644, 1636
Esp3I CGTCTC 1 cut(s) 105
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FaqI GGGAC 4 cut(s) 87, 490, 755, 1196
FauI CCCGC 2 cut(s) 627, 2386
FauNDI CATATG 1 cut(s) 2026
FbaI TGATCA 1 cut(s) 805
FblI GTMKAC 1 cut(s) 1052
FokI GGATG 3 cut(s) 772, 1205, 2404
FriOI GRGCYC 1 cut(s) 2405
FseI GGCCGGCC 1 cut(s) 642
FspBI CTAG 9 cut(s) 60, 152, 945, 1742, 1851, 1971, 2108, 2406, 2479
FspI TGCGCA 1 cut(s) 611
GlaI GCGC 1 cut(s) 611
GsaI CCCAGC 2 cut(s) 741, 1419
GsuI CTGGAG 1 cut(s) 213
HaeIII GGCC 6 cut(s) 300, 638, 642, 1635, 1913, 2314
HapII CCGG 8 cut(s) 168, 499, 508, 551, 558, 639, 1043, 1147
HgaI GACGC 3 cut(s) 92, 978, 1833
HhaI GCGC 1 cut(s) 612
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 1 cut(s) 610
HinP1I GCGC 1 cut(s) 610
HincII GTYRAC 2 cut(s) 700, 1422
HindII GTYRAC 2 cut(s) 700, 1422
HindIII AAGCTT 2 cut(s) 383, 1544
HpaII CCGG 8 cut(s) 168, 499, 508, 551, 558, 639, 1043, 1147
HphI GGTGA 8 cut(s) 128, 302, 354, 933, 971, 2031, 2246, 2358
Hpy166II GTNNAC 5 cut(s) 700, 993, 1053, 1066, 1422
Hpy188I TCNGA 6 cut(s) 110, 463, 1210, 1480, 1671, 2080
Hpy188III TCNNGA 9 cut(s) 28, 215, 777, 1001, 1018, 1217, 1831, 1871, 1881
Hpy8I GTNNAC 5 cut(s) 700, 993, 1053, 1066, 1422
HpyAV CCTTC 9 cut(s) 56, 437, 730, 1004, 1015, 1547, 2051, 2192, 2373
HpyCH4III ACNGT 9 cut(s) 101, 116, 290, 673, 861, 881, 1324, 1507, 2064
HpyCH4IV ACGT 2 cut(s) 348, 1060
HpyF10VI GCNNNNNNNGC 4 cut(s) 499, 1259, 1298, 1952
HpyF3I CTNAG 4 cut(s) 460, 745, 1280, 1886
HpySE526I ACGT 2 cut(s) 348, 1060
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 1 cut(s) 610
KpnI GGTACC 1 cut(s) 672
KroI GCCGGC 1 cut(s) 638
KroNI GCCGGC 1 cut(s) 640
Ksp22I TGATCA 1 cut(s) 805
Kzo9I GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
LguI GCTCTTC 1 cut(s) 2364
LmnI GCTCC 2 cut(s) 1571, 1987
LweI GCATC 1 cut(s) 1228
MaeI CTAG 9 cut(s) 60, 152, 945, 1742, 1851, 1971, 2108, 2406, 2479
MaeII ACGT 2 cut(s) 348, 1060
MaeIII GTNAC 8 cut(s) 116, 881, 1168, 1318, 1438, 1482, 2037, 2452
MalI GATC 7 cut(s) 752, 807, 815, 1160, 1315, 1905, 2310
MboI GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
MfeI CAATTG 1 cut(s) 2463
MflI RGATCY 2 cut(s) 1313, 1903
MhlI GDGCHC 3 cut(s) 657, 1807, 2405
MlsI TGGCCA 1 cut(s) 1635
MluNI TGGCCA 1 cut(s) 1635
MlyI GAGTC 5 cut(s) 737, 961, 1040, 1242, 1769
MmeI TCCRAC 5 cut(s) 492, 655, 1708, 1796, 1999
Mox20I TGGCCA 1 cut(s) 1635
MroNI GCCGGC 1 cut(s) 638
MroXI GAANNNNTTC 1 cut(s) 1665
MscI TGGCCA 1 cut(s) 1635
MseI TTAA 5 cut(s) 1653, 1701, 1788, 1811, 2342
MslI CAYNNNNRTG 3 cut(s) 1073, 1136, 2284
Msp20I TGGCCA 1 cut(s) 1635
MspA1I CMGCKG 1 cut(s) 666
MspI CCGG 8 cut(s) 168, 499, 508, 551, 558, 639, 1043, 1147
MspR9I CCNGG 7 cut(s) 168, 508, 551, 552, 559, 924, 1148
MunI CAATTG 1 cut(s) 2463
Mva1269I GAATGC 2 cut(s) 2137, 2268
MvaI CCWGG 1 cut(s) 924
MwoI GCNNNNNNNGC 4 cut(s) 499, 1259, 1298, 1952
NaeI GCCGGC 1 cut(s) 640
NciI CCSGG 6 cut(s) 168, 508, 551, 552, 559, 1148
NdeI CATATG 1 cut(s) 2026
NdeII GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
NgoMIV GCCGGC 1 cut(s) 638
NlaIV GGNNCC 7 cut(s) 321, 506, 556, 594, 670, 1567, 2140
NmuCI GTSAC 5 cut(s) 116, 881, 1168, 2037, 2452
NsbI TGCGCA 1 cut(s) 611
NspI RCATGY 5 cut(s) 573, 918, 999, 2180, 2460
NspV TTCGAA 1 cut(s) 930
OliI CACNNNNGTG 1 cut(s) 2284
PagI TCATGA 1 cut(s) 1870
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 4 cut(s) 569, 995, 2176, 2456
PciSI GCTCTTC 1 cut(s) 2364
PctI GAATGC 2 cut(s) 2137, 2268
PdiI GCCGGC 1 cut(s) 640
PdmI GAANNNNTTC 1 cut(s) 1665
PleI GAGTC 5 cut(s) 737, 960, 1040, 1241, 1769
PmaCI CACGTG 1 cut(s) 1061
PmlI CACGTG 1 cut(s) 1061
PpsI GAGTC 5 cut(s) 737, 960, 1040, 1241, 1769
Ppu21I YACGTR 1 cut(s) 1061
PpuMI RGGWCCY 1 cut(s) 319
PscI ACATGT 4 cut(s) 569, 995, 2176, 2456
PsiI TTATAA 2 cut(s) 1575, 2261
Psp1406I AACGTT 1 cut(s) 348
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 1 cut(s) 922
PspCI CACGTG 1 cut(s) 1061
PspFI CCCAGC 2 cut(s) 737, 1415
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 7 cut(s) 321, 506, 556, 594, 670, 1567, 2140
PspPI GGNCC 7 cut(s) 319, 339, 504, 636, 641, 866, 1144
PspPPI RGGWCCY 1 cut(s) 319
PsuI RGATCY 2 cut(s) 1313, 1903
RigI GGCCGGCC 1 cut(s) 642
RsaI GTAC 4 cut(s) 328, 568, 670, 2461
RsaNI GTAC 4 cut(s) 327, 567, 669, 2460
RseI CAYNNNNRTG 3 cut(s) 1073, 1136, 2284
SapI GCTCTTC 1 cut(s) 2364
SaqAI TTAA 5 cut(s) 1653, 1701, 1788, 1811, 2342
Sau3AI GATC 7 cut(s) 750, 805, 813, 1158, 1313, 1903, 2308
Sau96I GGNCC 7 cut(s) 319, 339, 504, 636, 641, 866, 1144
SchI GAGTC 5 cut(s) 737, 961, 1040, 1242, 1769
ScrFI CCNGG 7 cut(s) 168, 508, 551, 552, 559, 924, 1148
SduI GDGCHC 3 cut(s) 657, 1807, 2405
SfaNI GCATC 1 cut(s) 1228
SfcI CTRYAG 1 cut(s) 2229
SfuI TTCGAA 1 cut(s) 930
SinI GGWCC 5 cut(s) 319, 339, 504, 866, 1144
SmaI CCCGGG 1 cut(s) 552
SmiMI CAYNNNNRTG 3 cut(s) 1073, 1136, 2284
SmlI CTYRAG 2 cut(s) 413, 754
SmoI CTYRAG 2 cut(s) 413, 754
SseBI AGGCCT 1 cut(s) 300
SsiI CCGC 9 cut(s) 184, 342, 502, 596, 634, 666, 864, 1515, 2379
SspI AATATT 1 cut(s) 1977
SspMI CTAG 9 cut(s) 60, 152, 945, 1742, 1851, 1971, 2108, 2406, 2479
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 7 cut(s) 166, 506, 549, 550, 557, 922, 1146
StyI CCWWGG 2 cut(s) 644, 1636
TaaI ACNGT 9 cut(s) 101, 116, 290, 673, 861, 881, 1324, 1507, 2064
TaiI ACGT 2 cut(s) 351, 1063
TaqI TCGA 5 cut(s) 15, 930, 1231, 1236, 1830
TatI WGTACW 2 cut(s) 566, 2459
Tru1I TTAA 5 cut(s) 1653, 1701, 1788, 1811, 2342
Tru9I TTAA 5 cut(s) 1653, 1701, 1788, 1811, 2342
TscAI CASTG 2 cut(s) 753, 866
TseFI GTSAC 5 cut(s) 116, 881, 1168, 2037, 2452
Tsp45I GTSAC 5 cut(s) 116, 881, 1168, 2037, 2452
TspGWI ACGGA 1 cut(s) 1558
TspMI CCCGGG 1 cut(s) 550
TspRI CASTG 2 cut(s) 753, 866
VpaK11BI GGWCC 5 cut(s) 319, 339, 504, 866, 1144
XapI RAATTY 6 cut(s) 172, 659, 818, 1396, 2164, 2297
XceI RCATGY 5 cut(s) 573, 918, 999, 2180, 2460
XcmI CCANNNNNNNNNTGG 1 cut(s) 1768
XmaI CCCGGG 1 cut(s) 550
XmiI GTMKAC 1 cut(s) 1052
XmnI GAANNNNTTC 1 cut(s) 1665
XspI CTAG 9 cut(s) 60, 152, 945, 1742, 1851, 1971, 2108, 2406, 2479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.