pycom05g30390

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Forward (+)
30518222 .. 30521685
3464 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g30390.1

Sequence Viewer

Length: 2697 bp
ATGCAGGGATTTTCTAATAAAAAAATGCTGCAAATGTTTGACTTTAAGAGGCCACATCCAACCAATTTGTCCAAAGTCCAGAAGGCGTTGCATTCTATGTGGAGTCTGTGTCCAAGTTTTCTTCCACGAGTACCTTTCGTGCAAGTAATCAGTAGTGCTTTGGCAAACCTTTGTTCTGCAATAATGAATTTTCTGAAAGGTCTGCTAAATGTTTTAGTTCTTCAGCACCTCCTTCTCCAGCTCTGCTCTTCCTTGGACACCATAAAATTTGATCAATCCGTCGGAGACGGTGATTTCTTGGTGTCCAAGAACGAGACCTTTGTCCTGGGATTCTTTAGTCCCGGGACATCTACCAACCGCTATGTCGGAATTTGGTACAAATTTTCGGAAGACTTGGTTGTGTGGGTGGCCAACAGAGATTATCCCATCAATGGCAGCTCAGGAGTTCTCTCAATAGGTTCTGATGGAAACCTAGTGCTACAAGCCAATACTAGCCAAGGCCTAGTTCCTCTGTGGTCAACAAATGTTTCGATATCACCAGCGAGCAACGGTAATATTTCTGCGCAAATTCTTGATTCGGGAAGCCTTGTTTTGGCTCAACAAGGCAGCCAGGATGTTTTTTGGCAGAGTACTGATCACCCTACAAATATTCTTCTTTCGAATATGAAAATCGGGTTGGACAGAAGAAGTGGCATAAACCGGTTCCTCACGTGTTGGAACTCGGACAATGATCCTGGGACGGGGAATGTTTCGTTGAGAATGGACCCGAATGGATTGCCTGAGTCGATCTTGTACAAGGATGACGCTAAGTGGTGGAGGTCAGGACAGTGGAACGGGATTCAATGGGGAGGCATACCTGCCGTGCAGCGGAACGTTGTGTTTAAGATCAATTTTGTGAACAACCAAGATGAAATTGCTGTGCGGTGGACTGTTCTTGACCCTTCAATTTACTCGGTGATCACAATAGACGGGTCGGGAACACTCAACCAGCTATCATGGCAGGACCAGCAGCACCAGTGGGTTTCGCTTTGGTCGGCACCATTGGATGCCTGTGACAGCTATGGCAAGTGTGGTCAATTTGGCAATTGCAATCCTTACACCAACAGTGGGTTCAACTGCACATGCTACCCCGGATATGAACCAACCTCACCGCAGGATTGGGATTTAAGAGATGGGACAGATGGGTGCAAGAGGCCTCAGGGCTCGCCGTCCATGTGCAGGAACGGTGAGGGTTTTGTGAAGCTGGAGAATGTAAAGGTTCCAGACACGTCCTCTATAAAATTGGAGAATAATTTGAGCTTAGAAGCGTGCGAGGAGGAGTGCTTGAACAACTGCTCGTGCTTGGCATATGCGAGTGCAGATGTGAGGAATGGAGGGACTGGATGCATGACATGGTATAGAGATTTGATGGATACTAAGCAGTTCACAGAAGGCGGGCAAGATTTGTACGTCCGCGTTGATGCAGTAGTTTTAGCTCAGTATAAAAACAAGTCAGGAGGGAGAAGGCGACTGGCTATTATATTGGTAGTGTCAACTTCTGTCGCCTCATTGCTCATCCTCGCAGTTCTATGTTGGTTCAGGAAAAGGAGCAGGAAAGGGAGAGGAGGAGAACCTAGATTTCTGAATGATCCCGCTGCTTCTGGTGTACGAAGCTATGAAGATTTGCCAATAAAAAATGAGGTTGATGAACACAGAGGAGACACAGATTTACCTTTTTTCGATTTAACCACTGTGGTTGCAGCCACAGAAAACTTCTCTTATGCTAACATGCTTGGACATGGCGGCTTCGGCACGGTATATAAGGGATGTCTAGCTGATGGACAGGACATAGCTGTCAAAAGATTATCGAGAAATTCAGGACAAGGCGTAGATGAATTCAAGAACGAAGTAATGCTTATAGCAAAGCTTCAGCATAGAAATCTTGTGAGGCTTTTGGGTTGCTGCATACATAAAGAAGAGAGGATGCTAATCTATGAATACATGCCAAATCGCAGCTTGGACTTGTGCATTTTCGATAAAAATAGAAAGTCGTTGTTAGATTGGAGAAAGCGGTTTCAAATTATCATTGGGATTGCTCGAGGCGTCCTATATCTTCATCAAGATTCGAGACTAAAAATAATCCACAGGGATTTGAAAGCAAGCAATGTTTTACTGGATGGTTCAATGAACCCAAAAATATCAGATTTTGGCATGGCAAGAATGTTCGGGGATGATCAAATTGAAGCAAACACGAATAGAGTTGTTGGCACCTACGGCTACATGTCACCGGAGTATGCTATGGATGGACTATATTCCATAAAATCCGATGTGTTTAGCTTCGGAGTCTTAGCACTAGAGATCATTAGCGGCAGAAAGAACAGTTTCCAATTCGAAAACACCTCTCTAAATTTGGTTGGACTTATATGGGACTTGTGGACAGAAGGAAAAGTCTTGGACATAGTTGATTCATCACTGAACCAGTCGTATTCGACTCACGAAGTTATGAGATGCATTCAGATTGGGCTCTTGTGCGTGCAAGAAAACGCAGCGGACCGGCCAACCATGCTAGATGTTGTGTTCATGCTGGGGAATGAAACGAATCTTCCACATCCAAAAAAGGCAGCGTTTAGCTTCAAAACCGGCGGTCCGGATTCTTCAACATCTAGAGGAGCTTCCTCTGTAAATGATGTAACAGTAACAGTTATTGAACCTCGTTGA

Protein Analysis

899

Amino Acids

99.85

Weight (kDa)

6.27

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 133 - 239 2.1e-28 D-mannose binding lectin
S_locus_glycop PF00954 272 - 382 2.4e-26 S-locus glycoprotein domain
PAN_2 PF08276 406 - 472 5.9e-21 PAN-like domain
PK_Tyr_Ser-Thr PF07714 588 - 852 4.5e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 588 - 794 9.4e-42 Protein kinase domain
DUF3403 PF11883 857 - 898 5.4e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1832
Acc16I TGCGCA 1 cut(s) 564
Acc36I ACCTGC 1 cut(s) 865
AccB1I GGYRCC 2 cut(s) 1036, 2246
AccII CGCG 1 cut(s) 1455
AccIII TCCGGA 1 cut(s) 2626
AclI AACGTT 1 cut(s) 873
AclWI GGATC 2 cut(s) 725, 1622
AcoI YGGCCR 2 cut(s) 408, 2534
AcsI RAATTY 8 cut(s) 187, 266, 369, 380, 567, 1852, 1874, 2386
AcuI CTGAAG 2 cut(s) 206, 1892
AcvI CACGTG 1 cut(s) 711
AcyI GRCGYC 1 cut(s) 2082
AfaI GTAC 6 cut(s) 132, 377, 631, 794, 1448, 1647
AfiI CCNNNNNNNGG 6 cut(s) 431, 592, 740, 867, 1107, 1218
AflIII ACRYGT 3 cut(s) 710, 1266, 2259
AgeI ACCGGT 1 cut(s) 699
AjiI CACGTC 1 cut(s) 1269
AjnI CCWGG 3 cut(s) 324, 609, 733
AjuI GAANNNNNNNTTGG 6 cut(s) 489, 521, 659, 691, 1094, 1126
Alw26I GTCTC 4 cut(s) 279, 308, 1692, 2101
AlwI GGATC 2 cut(s) 725, 1622
Ama87I CYCGRG 2 cut(s) 341, 2076
Aor13HI TCCGGA 1 cut(s) 2626
AoxI GGCC 5 cut(s) 50, 408, 499, 1193, 2534
ApoI RAATTY 8 cut(s) 187, 266, 369, 380, 567, 1852, 1874, 2386
AsiGI ACCGGT 1 cut(s) 699
Asp700I GAANNNNTTC 1 cut(s) 2360
AspLEI GCGC 1 cut(s) 565
AspS9I GGNCC 4 cut(s) 763, 1003, 2530, 2624
AsuC2I CCSGG 3 cut(s) 342, 343, 1131
AsuHPI GGTGA 7 cut(s) 302, 528, 629, 967, 1140, 1238, 2256
AsuII TTCGAA 2 cut(s) 659, 2370
AvaI CYCGRG 2 cut(s) 341, 2076
AvaII GGWCC 4 cut(s) 763, 1003, 2530, 2624
AxyI CCTNAGG 1 cut(s) 1197
BalI TGGCCA 1 cut(s) 410
BanI GGYRCC 2 cut(s) 1036, 2246
BanII GRGCYC 2 cut(s) 1205, 2505
BauI CACGAG 2 cut(s) 126, 1336
BbrPI CACGTG 1 cut(s) 711
BbsI GAAGAC 1 cut(s) 396
BccI CCATC 8 cut(s) 434, 458, 1166, 1175, 1402, 1811, 2150, 2276
BceAI ACGGC 3 cut(s) 845, 1192, 2269
BcgI CGANNNNNNTGC 2 cut(s) 757, 791
BciT130I CCWGG 3 cut(s) 326, 611, 735
BciVI GTATCC 1 cut(s) 1405
BclI TGATCA 4 cut(s) 271, 634, 957, 2212
BcnI CCSGG 3 cut(s) 342, 343, 1131
BcoDI GTCTC 4 cut(s) 279, 308, 1692, 2101
BfaI CTAG 8 cut(s) 473, 492, 503, 1614, 1811, 2333, 2546, 2643
BfuAI ACCTGC 1 cut(s) 865
BfuI GTATCC 1 cut(s) 1405
BmcAI AGTACT 1 cut(s) 631
Bme1390I CCNGG 6 cut(s) 326, 342, 343, 611, 735, 1131
Bme18I GGWCC 4 cut(s) 763, 1003, 2530, 2624
BmeT110I CYCGRG 2 cut(s) 341, 2076
BmgBI CACGTC 1 cut(s) 1269
BmgT120I GGNCC 4 cut(s) 763, 1003, 2530, 2624
BmiI GGNNCC 5 cut(s) 704, 765, 1038, 1260, 2248
BmrFI CCNGG 6 cut(s) 326, 342, 343, 611, 735, 1131
BmsI GCATC 5 cut(s) 1036, 1373, 1450, 1953, 2477
BoxI GACNNNNGTC 1 cut(s) 320
BpiI GAAGAC 1 cut(s) 396
BpmI CTGGAG 2 cut(s) 221, 1265
Bpu10I CCTNAGC 1 cut(s) 439
Bpu14I TTCGAA 2 cut(s) 659, 2370
BpuMI CCSGG 3 cut(s) 342, 343, 1131
BsaAI YACGTR 1 cut(s) 711
BsaBI GATNNNNATC 1 cut(s) 1967
BsaHI GRCGYC 1 cut(s) 2082
BsaI GGTCTC 1 cut(s) 308
BsaJI CCNNGG 6 cut(s) 252, 325, 341, 496, 734, 1129
BsaWI WCCGGW 3 cut(s) 699, 2266, 2626
BsaXI ACNNNNNCTCC 2 cut(s) 94, 124
Bsc4I CCNNNNNNNGG 6 cut(s) 431, 592, 740, 867, 1107, 1218
Bse118I RCCGGY 3 cut(s) 699, 2532, 2618
Bse1I ACTGG 5 cut(s) 1015, 1384, 1515, 2157, 2458
Bse21I CCTNAGG 1 cut(s) 1197
Bse3DI GCAATG 2 cut(s) 1547, 2149
Bse8I GATNNNNATC 1 cut(s) 1967
BseAI TCCGGA 1 cut(s) 2626
BseBI CCWGG 3 cut(s) 326, 611, 735
BseDI CCNNGG 6 cut(s) 252, 325, 341, 496, 734, 1129
BseJI GATNNNNATC 1 cut(s) 1967
BseLI CCNNNNNNNGG 6 cut(s) 431, 592, 740, 867, 1107, 1218
BseMI GCAATG 2 cut(s) 1547, 2149
BseMII CTCAG 4 cut(s) 453, 771, 1211, 1490
BseNI ACTGG 5 cut(s) 1015, 1384, 1515, 2157, 2458
BseRI GAGGAG 6 cut(s) 1328, 1331, 1617, 1620, 1710, 2661
BseYI CCCAGC 1 cut(s) 2563
BsgI GTGCAG 4 cut(s) 884, 1102, 1237, 1377
Bsh1236I CGCG 1 cut(s) 1455
BshFI GGCC 5 cut(s) 52, 410, 501, 1195, 2536
BshNI GGYRCC 2 cut(s) 1036, 2246
BshTI ACCGGT 1 cut(s) 699
BsiHKCI CYCGRG 2 cut(s) 341, 2076
BsiSI CCGG 7 cut(s) 342, 700, 1131, 2267, 2533, 2619, 2627
BslFI GGGAC 6 cut(s) 324, 358, 751, 1189, 1390, 2420
BslI CCNNNNNNNGG 6 cut(s) 431, 592, 740, 867, 1107, 1218
BsmAI GTCTC 4 cut(s) 279, 308, 1692, 2101
BsmBI CGTCTC 1 cut(s) 279
BsmFI GGGAC 6 cut(s) 324, 358, 751, 1189, 1390, 2420
BsmI GAATGC 2 cut(s) 91, 2490
BsnI GGCC 5 cut(s) 52, 410, 501, 1195, 2536
Bso31I GGTCTC 1 cut(s) 308
BsoBI CYCGRG 2 cut(s) 341, 2076
Bsp119I TTCGAA 2 cut(s) 659, 2370
Bsp1286I GDGCHC 2 cut(s) 1205, 2505
Bsp13I TCCGGA 1 cut(s) 2626
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
BspANI GGCC 5 cut(s) 52, 410, 501, 1195, 2536
BspCNI CTCAG 4 cut(s) 452, 772, 1210, 1489
BspEI TCCGGA 1 cut(s) 2626
BspFNI CGCG 1 cut(s) 1455
BspLI GGNNCC 5 cut(s) 704, 765, 1038, 1260, 2248
BspMI ACCTGC 1 cut(s) 865
BspPI GGATC 2 cut(s) 725, 1622
BspQI GCTCTTC 1 cut(s) 253
BspT104I TTCGAA 2 cut(s) 659, 2370
BspT107I GGYRCC 2 cut(s) 1036, 2246
BspTNI GGTCTC 1 cut(s) 308
BsrDI GCAATG 2 cut(s) 1547, 2149
BsrFI RCCGGY 3 cut(s) 699, 2532, 2618
BsrGI TGTACA 1 cut(s) 792
BsrI ACTGG 5 cut(s) 1015, 1384, 1515, 2157, 2458
BssAI RCCGGY 3 cut(s) 699, 2532, 2618
BssECI CCNNGG 6 cut(s) 252, 325, 341, 496, 734, 1129
BssMI GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
BssNI GRCGYC 1 cut(s) 2082
BssSI CACGAG 2 cut(s) 126, 1336
BssT1I CCWWGG 2 cut(s) 252, 496
Bst2BI CACGAG 2 cut(s) 126, 1336
Bst2UI CCWGG 3 cut(s) 326, 611, 735
Bst6I CTCTTC 2 cut(s) 253, 1950
BstACI GRCGYC 1 cut(s) 2082
BstAUI TGTACA 1 cut(s) 792
BstBAI YACGTR 1 cut(s) 711
BstBI TTCGAA 2 cut(s) 659, 2370
BstC8I GCNNGC 6 cut(s) 544, 1205, 1309, 1436, 2140, 2513
BstDEI CTNAG 8 cut(s) 439, 780, 807, 1197, 1300, 1416, 1476, 2326
BstFNI CGCG 1 cut(s) 1455
BstHHI GCGC 1 cut(s) 565
BstKTI GATC 9 cut(s) 274, 637, 733, 789, 888, 960, 1630, 2215, 2340
BstMAI GTCTC 4 cut(s) 279, 308, 1692, 2101
BstMBI GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
BstMWI GCNNNNNNNGC 5 cut(s) 997, 1006, 1788, 2253, 2542
BstNI CCWGG 3 cut(s) 326, 611, 735
BstNSI RCATGY 4 cut(s) 1125, 1771, 1984, 2263
BstPAI GACNNNNGTC 1 cut(s) 320
BstSCI CCNGG 6 cut(s) 324, 340, 341, 609, 733, 1129
BstUI CGCG 1 cut(s) 1455
BstV2I GAAGAC 1 cut(s) 396
Bsu36I CCTNAGG 1 cut(s) 1197
BsuI GTATCC 1 cut(s) 1405
BsuRI GGCC 5 cut(s) 52, 410, 501, 1195, 2536
BtrI CACGTC 1 cut(s) 1269
BtsIMutI CAGTG 5 cut(s) 833, 1022, 1111, 1728, 2450
BveI ACCTGC 1 cut(s) 865
Cac8I GCNNGC 6 cut(s) 544, 1205, 1309, 1436, 2140, 2513
CfoI GCGC 1 cut(s) 565
Cfr10I RCCGGY 3 cut(s) 699, 2532, 2618
Cfr13I GGNCC 4 cut(s) 763, 1003, 2530, 2624
Cfr9I CCCGGG 1 cut(s) 341
CpoI CGGWCCG 2 cut(s) 2530, 2624
CseI GACGC 2 cut(s) 812, 2071
Csp6I GTAC 6 cut(s) 131, 376, 630, 793, 1447, 1646
CspAI ACCGGT 1 cut(s) 699
CspCI CAANNNNNGTGG 2 cut(s) 1717, 1752
CspI CGGWCCG 2 cut(s) 2530, 2624
CviQI GTAC 6 cut(s) 131, 376, 630, 793, 1447, 1646
DdeI CTNAG 8 cut(s) 439, 780, 807, 1197, 1300, 1416, 1476, 2326
DpnI GATC 9 cut(s) 273, 636, 732, 788, 887, 959, 1629, 2214, 2339
DpnII GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
DrdI GACNNNNNNGTC 1 cut(s) 1832
DseDI GACNNNNNNGTC 1 cut(s) 1832
EaeI YGGCCR 2 cut(s) 408, 2534
Eam1104I CTCTTC 2 cut(s) 253, 1950
EarI CTCTTC 2 cut(s) 253, 1950
Eco130I CCWWGG 2 cut(s) 252, 496
Eco147I AGGCCT 2 cut(s) 501, 1195
Eco24I GRGCYC 2 cut(s) 1205, 2505
Eco31I GGTCTC 1 cut(s) 308
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 4 cut(s) 763, 1003, 2530, 2624
Eco57I CTGAAG 2 cut(s) 206, 1892
Eco72I CACGTG 1 cut(s) 711
Eco81I CCTNAGG 1 cut(s) 1197
Eco88I CYCGRG 2 cut(s) 341, 2076
EcoRI GAATTC 1 cut(s) 1874
EcoRII CCWGG 3 cut(s) 324, 609, 733
EcoRV GATATC 1 cut(s) 534
EcoT14I CCWWGG 2 cut(s) 252, 496
EcoT22I ATGCAT 2 cut(s) 1388, 2492
EcoT38I GRGCYC 2 cut(s) 1205, 2505
ErhI CCWWGG 2 cut(s) 252, 496
Esp3I CGTCTC 1 cut(s) 279
FalI AAGNNNNNCTT 2 cut(s) 1878, 1910
FaqI GGGAC 6 cut(s) 324, 358, 751, 1189, 1390, 2420
FauI CCCGC 2 cut(s) 1427, 1639
FauNDI CATATG 1 cut(s) 1348
FbaI TGATCA 4 cut(s) 271, 634, 957, 2212
FriOI GRGCYC 2 cut(s) 1205, 2505
FspBI CTAG 8 cut(s) 473, 492, 503, 1614, 1811, 2333, 2546, 2643
FspI TGCGCA 1 cut(s) 564
GlaI GCGC 1 cut(s) 564
GsaI CCCAGC 1 cut(s) 2567
GsuI CTGGAG 2 cut(s) 221, 1265
HaeIII GGCC 5 cut(s) 52, 410, 501, 1195, 2536
HapII CCGG 7 cut(s) 342, 700, 1131, 2267, 2533, 2619, 2627
HgaI GACGC 2 cut(s) 812, 2071
HhaI GCGC 1 cut(s) 565
Hin1I GRCGYC 1 cut(s) 2082
Hin6I GCGC 1 cut(s) 563
HinP1I GCGC 1 cut(s) 563
HincII GTYRAC 2 cut(s) 519, 1533
HindII GTYRAC 2 cut(s) 519, 1533
HindIII AAGCTT 1 cut(s) 1904
HpaII CCGG 7 cut(s) 342, 700, 1131, 2267, 2533, 2619, 2627
HphI GGTGA 7 cut(s) 302, 528, 629, 967, 1140, 1238, 2256
Hpy166II GTNNAC 7 cut(s) 519, 898, 927, 1425, 1533, 1646, 2415
Hpy8I GTNNAC 7 cut(s) 519, 898, 927, 1425, 1533, 1646, 2415
Hpy99I CGWCG 1 cut(s) 284
HpyAV CCTTC 6 cut(s) 76, 242, 951, 1424, 1497, 2414
HpyCH4IV ACGT 4 cut(s) 710, 873, 1268, 1449
HpyF10VI GCNNNNNNNGC 5 cut(s) 997, 1006, 1788, 2253, 2542
HpyF3I CTNAG 8 cut(s) 439, 780, 807, 1197, 1300, 1416, 1476, 2326
HpySE526I ACGT 4 cut(s) 710, 873, 1268, 1449
Hsp92I GRCGYC 1 cut(s) 2082
HspAI GCGC 1 cut(s) 563
Kpn2I TCCGGA 1 cut(s) 2626
Ksp22I TGATCA 4 cut(s) 271, 634, 957, 2212
Kzo9I GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
LguI GCTCTTC 1 cut(s) 253
LmnI GCTCC 2 cut(s) 1587, 2648
LweI GCATC 5 cut(s) 1036, 1373, 1450, 1953, 2477
MaeI CTAG 8 cut(s) 473, 492, 503, 1614, 1811, 2333, 2546, 2643
MaeII ACGT 4 cut(s) 710, 873, 1268, 1449
MaeIII GTNAC 4 cut(s) 1052, 2262, 2668, 2674
MalI GATC 9 cut(s) 273, 636, 732, 788, 887, 959, 1629, 2214, 2339
MboI GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
MfeI CAATTG 1 cut(s) 1084
MhlI GDGCHC 2 cut(s) 1205, 2505
MlsI TGGCCA 1 cut(s) 410
MluNI TGGCCA 1 cut(s) 410
MlyI GAGTC 4 cut(s) 112, 791, 2331, 2464
MmeI TCCRAC 6 cut(s) 83, 262, 346, 657, 695, 2374
Mox20I TGGCCA 1 cut(s) 410
Mph1103I ATGCAT 2 cut(s) 1388, 2492
MroI TCCGGA 1 cut(s) 2626
MroXI GAANNNNTTC 1 cut(s) 2360
MscI TGGCCA 1 cut(s) 410
MseI TTAA 4 cut(s) 45, 882, 1166, 1724
Msp20I TGGCCA 1 cut(s) 410
MspA1I CMGCKG 3 cut(s) 868, 1634, 2528
MspI CCGG 7 cut(s) 342, 700, 1131, 2267, 2533, 2619, 2627
MspR9I CCNGG 6 cut(s) 326, 342, 343, 611, 735, 1131
MunI CAATTG 1 cut(s) 1084
Mva1269I GAATGC 2 cut(s) 91, 2490
MvaI CCWGG 3 cut(s) 326, 611, 735
MvnI CGCG 1 cut(s) 1455
MwoI GCNNNNNNNGC 5 cut(s) 997, 1006, 1788, 2253, 2542
NciI CCSGG 3 cut(s) 342, 343, 1131
NdeI CATATG 1 cut(s) 1348
NdeII GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
NlaIV GGNNCC 5 cut(s) 704, 765, 1038, 1260, 2248
NmuCI GTSAC 2 cut(s) 1052, 2262
NsbI TGCGCA 1 cut(s) 564
NsiI ATGCAT 2 cut(s) 1388, 2492
NspI RCATGY 4 cut(s) 1125, 1771, 1984, 2263
NspV TTCGAA 2 cut(s) 659, 2370
PaeR7I CTCGAG 1 cut(s) 2076
PceI AGGCCT 2 cut(s) 501, 1195
PciI ACATGT 1 cut(s) 2259
PciSI GCTCTTC 1 cut(s) 253
PctI GAATGC 2 cut(s) 91, 2490
PdmI GAANNNNTTC 1 cut(s) 2360
PfeI GAWTC 7 cut(s) 330, 575, 838, 2102, 2444, 2578, 2630
PinAI ACCGGT 1 cut(s) 699
PleI GAGTC 4 cut(s) 111, 790, 2330, 2464
PmaCI CACGTG 1 cut(s) 711
PmlI CACGTG 1 cut(s) 711
PpsI GAGTC 4 cut(s) 111, 790, 2330, 2464
Ppu21I YACGTR 1 cut(s) 711
PscI ACATGT 1 cut(s) 2259
PshAI GACNNNNGTC 1 cut(s) 320
Psp1406I AACGTT 1 cut(s) 873
Psp6I CCWGG 3 cut(s) 324, 609, 733
PspCI CACGTG 1 cut(s) 711
PspFI CCCAGC 1 cut(s) 2563
PspGI CCWGG 3 cut(s) 324, 609, 733
PspN4I GGNNCC 5 cut(s) 704, 765, 1038, 1260, 2248
PspPI GGNCC 4 cut(s) 763, 1003, 2530, 2624
PspXI VCTCGAGB 1 cut(s) 2076
RsaI GTAC 6 cut(s) 132, 377, 631, 794, 1448, 1647
RsaNI GTAC 6 cut(s) 131, 376, 630, 793, 1447, 1646
Rsr2I CGGWCCG 2 cut(s) 2530, 2624
RsrII CGGWCCG 2 cut(s) 2530, 2624
SapI GCTCTTC 1 cut(s) 253
SaqAI TTAA 4 cut(s) 45, 882, 1166, 1724
Sau3AI GATC 9 cut(s) 271, 634, 730, 786, 885, 957, 1627, 2212, 2337
Sau96I GGNCC 4 cut(s) 763, 1003, 2530, 2624
ScaI AGTACT 1 cut(s) 631
SchI GAGTC 4 cut(s) 112, 791, 2331, 2464
ScrFI CCNGG 6 cut(s) 326, 342, 343, 611, 735, 1131
SduI GDGCHC 2 cut(s) 1205, 2505
SfaNI GCATC 5 cut(s) 1036, 1373, 1450, 1953, 2477
Sfr274I CTCGAG 1 cut(s) 2076
SfuI TTCGAA 2 cut(s) 659, 2370
SinI GGWCC 4 cut(s) 763, 1003, 2530, 2624
SlaI CTCGAG 1 cut(s) 2076
SmaI CCCGGG 1 cut(s) 343
SmlI CTYRAG 1 cut(s) 2076
SmoI CTYRAG 1 cut(s) 2076
SseBI AGGCCT 2 cut(s) 501, 1195
SspI AATATT 2 cut(s) 556, 649
SspMI CTAG 8 cut(s) 473, 492, 503, 1614, 1811, 2333, 2546, 2643
StuI AGGCCT 2 cut(s) 501, 1195
StyD4I CCNGG 6 cut(s) 324, 340, 341, 609, 733, 1129
StyI CCWWGG 2 cut(s) 252, 496
TaiI ACGT 4 cut(s) 713, 876, 1271, 1452
TatI WGTACW 2 cut(s) 629, 792
TauI GCSGC 2 cut(s) 1785, 2349
TfiI GAWTC 7 cut(s) 330, 575, 838, 2102, 2444, 2578, 2630
Tru1I TTAA 4 cut(s) 45, 882, 1166, 1724
Tru9I TTAA 4 cut(s) 45, 882, 1166, 1724
TscAI CASTG 5 cut(s) 833, 1022, 1111, 1735, 2457
TseFI GTSAC 2 cut(s) 1052, 2262
Tsp45I GTSAC 2 cut(s) 1052, 2262
TspGWI ACGGA 1 cut(s) 268
TspMI CCCGGG 1 cut(s) 341
TspRI CASTG 5 cut(s) 833, 1022, 1111, 1735, 2457
VpaK11BI GGWCC 4 cut(s) 763, 1003, 2530, 2624
XapI RAATTY 8 cut(s) 187, 266, 369, 380, 567, 1852, 1874, 2386
XbaI TCTAGA 1 cut(s) 2642
XceI RCATGY 4 cut(s) 1125, 1771, 1984, 2263
XhoI CTCGAG 1 cut(s) 2076
XmaI CCCGGG 1 cut(s) 341
XmnI GAANNNNTTC 1 cut(s) 2360
XspI CTAG 8 cut(s) 473, 492, 503, 1614, 1811, 2333, 2546, 2643
ZrmI AGTACT 1 cut(s) 631
Zsp2I ATGCAT 2 cut(s) 1388, 2492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.