Rw5G021680

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000099
Physical Location & Seq
Forward (+)
29424873 .. 29429070
4198 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G021680.1

Sequence Viewer

Length: 2511 bp
ATGAGTTCCAGCATCGAAGCGTTTATCCTGATATTGCTTCTCTTACTTCTTCTCCCCTCTAGAATTTGCCAGCTTCCCCTTGACGCCCTTACGTCAGACCGTCCCATCAGAGATGGTGAAGTTTTAGTCTCTAGCACGCAAATCTTTGCACTAGGGTTCTTCAGCCCCGGAAATTCTCAGCACCGCTACGTTGGAGTCTGGTATAACAAAGTTCCAGAGAAAACCATTGTCTGGGTTGCGAACAGAGATAACCCAGTGAATGATTCCTATGGAGTGCTATCGATCAATGGTGATGGAGGCCTTGTCATACATGGAAAGGACCGAAGTACCACTCTTTGGTCCGCAAACGTTACTCTATCTTCACCAAACAATTTCACAGCCAAGCTTTTGGATACAGGAAATCTTGTTTTACTTGAGAATAGCCAAAGAGTTCTGTGGGAAGGCTTTGATTACCCCTCAGATACACTGCTTTCCTCTATGAAGATTGGGCTGAACTGGCGGTCCGGTTTGGAGTGGCACCTAACATCTTGGAAGTCAAAAGATGACCCGGGAACAGGGAGTTGTACATATGGGATAGACCCGATGGGGTTTCCGCAGTTGTTTTTGTACAAGGGTAGAGGGGCATCGTGGCGGGGCGGCCCTTGGATCGGGGACAGATGGAGCGGTCTACCAGTAATAACCGCTACCGTTGGAGCCTACAATGTGAGTTTTGTCAATAATGAAGACGAGCTATCCTTCGTGTATGCTATTGCCAGGGACTCATTGATCACAAGGGGGGTGATAGATGAATCAGGAATATATCAACTGCTCGTGTGGAATGATCAGGAAAATCAATGGATCAAATTCGTCTCCTACCCGAGTGAGTGGTGTGATGAATATGGACAGTGCGGTCCAAATACTAACTGTGACTCAGATAAGGACTATAAGTTGGCTTGCACGTGCCTACCTGGGTTCGAATCCAAATCACCTCCTTTGAGAGTTGGCGGGGGTGGGTGCATTAGGAAAGCTGGAGCTTCCACGTGTCAAAATGGAGAAGGGTTCGTGAAGGTGGCGCGTGTAAAAATACCGGACTCGTCTACGGCACGTGTGAACATGAGTATGAGTTTGGAAGGGTGCAAACAAAAGTGCTTGATGGATTGTTCTTGCACAGCCTACACGAATGCGGATGAGCGGGGAGGTGGGATCGGGTGCGTGACATGGCACGGGGACTTGATGGACACGAGGACTTTCTCCAATGTTGGTCAAAATTTATATGTTCGAGTTGACGCAACTTCTTTAGCTCAATATGCAAAGTCAGGTGGTTCTCTTAGCAAGAAGGCAAGGCTGGCAATTTCACTAGGATCTATTATGGTTTTTCTTCTCTTACTTACCCTTTATTGGTTGGTAAGGATGAAGATGAAAGGTAAGCGTAGGCAAAATAAATATCCACTTAAACTTACTGCCGGGTCAACCTACTTTGAAGAAGCTACTGGTGGATTAGCTCTTCATCATGATAGTAGAATAAACTCGGAGTTACTATTCTTTCATCTAAAAACCATAGCAACCTCCACAAACAATTTCTCCATTGAAAACAAGCTTGGAGAAGGAGGTTTTGGCTGCGTTTATAAGGGCATACTTTATGATGGAAAGGAAATAGCCGTAAAGAGACTATCCAAGTTTTCTAGCCAAGGAGTTGAAGAGTTTAAGAATGAAGTTCTTCTGATTGCAAAACTCCAACATAGAAACCTTGTCAAGATTTTAGGTTGTTGTCTTGAAGATGAAGAGAAGATTCTAATCTATGAATACTTGCCAAACAAAAGTTTGGACACTTTCATCTTTAATGAAACAAGAAGAGTACTTTTAAGTTGGACAAGACGCTTCATGATTATCTTTGGGATTGCTAGAGGGTTATTATATCTTCATGAAGATTCGAGACTAAGAATTATCCATAGAGATCTAAAGGCCAGCAATGTTCTATTGGATAATTCTTTGAACCCAAAGATTGCAGATTTTGGTATGGCTAGAATGTTTAGAGGGGAGCAAACTGAAGCAAATACCAATCGTGTGGTTGGAACATATGGTTATATGTCACCAGAATACGCAATGGAAGGATTGTTTTCAATCAAGTCTGATGTGTATAGTTTTGGTGTCTTATTACTAGAAATCGTTACTGGCAAAAAGAATGCTGGTTCCCATGAGGGGTATCCTTATTCAAATTTGATCGGACATATTTGGGAGTTGTGGAAAGAAGGCAGAGTCGTGGAAATCATCGATTCATCTATAGGTGAATCTTACCTTGTTAGTGAAATTATAAGGTGCATTCAAATCGCACTCTTGTGTGTGCAAGAATTTGCGACTGATCGGCCAACCATGTCCGGAGTTGTTTCCATGTTAGGTAATGATTCAGCTCTTCCTTCACCAATGCGACCCGCATTTTTACTAAAGAGAATGAGTCCTAGTGGAGACTCATCCAGCAACAAAGGTGCTAATTCAGTAAATGATGTCACATGTACAATTGTAGAAGCTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin PAN_2 Pkinase_Tyr S_locus_glycop

Protein Analysis

836

Amino Acids

92.77

Weight (kDa)

7.73

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 178 6.5e-33 D-mannose binding lectin
S_locus_glycop PF00954 210 - 321 5.6e-25 S-locus glycoprotein domain
PAN_2 PF08276 341 - 407 1.8e-22 PAN-like domain
PK_Tyr_Ser-Thr PF07714 521 - 790 1.7e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 521 - 729 1.5e-43 Protein kinase domain
DUF3403 PF11883 793 - 836 2.7e-07 Domain of unknown function (DUF3403)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000099)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G11340 AT1G11340 AT1G11340 AT1G11410 AT1G11410 AT1G11410 AT1G11410
fragaria_vesca FvH4_3g03230 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03231 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03240 FvH4_3g03241 FvH4_3g03242 FvH4_3g03243 FvH4_3g03300 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03301 FvH4_3g03310 FvH4_3g03310 FvH4_6g07960
malus_domestica MD00G1203200.v1.1 MD02G1260900.v1.1 MD05G1263100.v1.1 MD05G1332300.v1.1 MD05G1332400.v1.1 MD05G1332600.v1.1 MD05G1332700.v1.1 MD05G1333400.v1.1 MD05G1333500.v1.1 MD05G1333700.v1.1 MD05G1334000.v1.1 MD10G1291100.v1.1 MD10G1291200.v1.1 MD10G1307900.v1.1 MD10G1308000.v1.1 MD10G1308200.v1.1 MD10G1308700.v1.1 MD17G1273200.v1.1
prunus_persica Prupe.4G031200_v2.0.a1 Prupe.4G031400_v2.0.a1 Prupe.4G031500_v2.0.a1 Prupe.4G031600_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.4G031800_v2.0.a1 Prupe.8G238600_v2.0.a1
pyrus_communis pycom02g22290 pycom02g22300 pycom05g30390 pycom05g30430 pycom05g30450 pycom05g30470 pycom05g30510 pycom05g30530 pycom05g30560 pycom05g30570 pycom10g24330 pycom10g25940 pycom10g25950 pycom10g25960 pycom10g25970 pycom10g25980 pycom10g25990 pycom10g26000 pycom10g26010 pycom10g26020 pycom10g26030 pycom17g27160
rosa_chinensis RchiOBHm_Chr2g0119951 RchiOBHm_Chr2g0119961 RchiOBHm_Chr2g0119981 RchiOBHm_Chr2g0120011 RchiOBHm_Chr2g0120061 RchiOBHm_Chr2g0120071 RchiOBHm_Chr3g0477341 RchiOBHm_Chr4g0411711 RchiOBHm_Chr4g0411831 RchiOBHm_Chr4g0411951 RchiOBHm_Chr5g0004871 RchiOBHm_Chr5g0004881 RchiOBHm_Chr5g0004891 RchiOBHm_Chr5g0004921 RchiOBHm_Chr5g0004931 RchiOBHm_Chr5g0004941 RchiOBHm_Chr5g0004961 RchiOBHm_Chr5g0004971 RchiOBHm_Chr5g0004991 RchiOBHm_Chr5g0005011 RchiOBHm_Chr5g0005031 RchiOBHm_Chr5g0005041 RchiOBHm_Chr5g0005051 RchiOBHm_Chr5g0034351 RchiOBHm_Chr5g0034371 RchiOBHm_Chr5g0035421 RchiOBHm_Chr5g0035471 RchiOBHm_Chr5g0035541 RchiOBHm_Chr5g0035551 RchiOBHm_Chr5g0035581 RchiOBHm_Chr5g0035651 RchiOBHm_Chr5g0035661 RchiOBHm_Chr5g0035791 RchiOBHm_Chr5g0035821 RchiOBHm_Chr5g0035881 RchiOBHm_Chr5g0035941 RchiOBHm_Chr5g0066181
rosa_laevigata RLG00000008339 RLG00000018505 RLG00000018510 RLG00000018738 RLG00000018741 RLG00000023265 RLG00000031268 RLG00000031270 RLG00000031272 RLG00000031274 RLG00000031275 RLG00000031278 RLG00000031280 RLG00000031281 RLG00000031282 RLG00000032920 RLG00000033622 RLG00000033628 RLG00000033641
rosa_multiflora Rmu_co8015890.1_g000001 Rmu_co8119476.1_g000001 Rmu_co8172744.1_g000001 Rmu_co8181302.1_g000001 Rmu_co8369629.1_g000001 Rmu_co8379407.1_g000001 Rmu_co8412887.1_g000001 Rmu_sc0000084.1_g000011 Rmu_sc0000084.1_g000012 Rmu_sc0000084.1_g000031 Rmu_sc0000593.1_g000007 Rmu_sc0000593.1_g000011 Rmu_sc0000593.1_g000014 Rmu_sc0000657.1_g000020 Rmu_sc0000711.1_g000010 Rmu_sc0000711.1_g000048 Rmu_sc0000813.1_g000017 Rmu_sc0001493.1_g000041 Rmu_sc0002935.1_g000014 Rmu_sc0002935.1_g000019 Rmu_sc0003096.1_g000002 Rmu_sc0003096.1_g000009 Rmu_sc0003096.1_g000010 Rmu_sc0003096.1_g000014 Rmu_sc0003541.1_g000052 Rmu_sc0004315.1_g000002 Rmu_sc0006173.1_g000007 Rmu_sc0006173.1_g000035 Rmu_sc0006369.1_g000003 Rmu_sc0007790.1_g000002 Rmu_sc0009702.1_g000001 Rmu_sc0009702.1_g000002 Rmu_sc0009702.1_g000004 Rmu_sc0009702.1_g000006 Rmu_sc0010714.1_g000001 Rmu_sc0010714.1_g000002 Rmu_sc0010714.1_g000007 Rmu_sc0010714.1_g000008 Rmu_sc0010714.1_g000009 Rmu_sc0011169.1_g000008 Rmu_sc0013877.1_g000001 Rmu_sc0013932.1_g000001 Rmu_sc0015231.1_g000005 Rmu_sc0016543.1_g000002 Rmu_sc0016543.1_g000003 Rmu_sc0017275.1_g000001 Rmu_sc0026861.1_g000001 Rmu_sc0030606.1_g000001
rosa_roxburghii Rroxscaffold_1G00044840 Rroxscaffold_1G00044850 Rroxscaffold_1G00044900 Rroxscaffold_1G00044980 Rroxscaffold_1G00044990 Rroxscaffold_1G00070600 Rroxscaffold_1G00070610 Rroxscaffold_1G00070630 Rroxscaffold_1G00070650 Rroxscaffold_1G00070680 Rroxscaffold_1G00070700 Rroxscaffold_1G00070710 Rroxscaffold_1G00070740 Rroxscaffold_1G00070750 Rroxscaffold_2G00123770 Rroxscaffold_2G00123820 Rroxscaffold_2G00123830 Rroxscaffold_2G00123900 Rroxscaffold_2G00123920 Rroxscaffold_4G00293110 Rroxscaffold_5G00353540 Rroxscaffold_5G00353620
rosa_rugosa Rorug01G0307800 Rorug02G0225800 Rorug02G0225900 Rorug04G0414800 Rorug04G0414800 Rorug04G0414800 Rorug04G0414900 Rorug04G0415000 Rorug05G0151600
rosa_samantha Rh3DG237000 Rh4BG166800 Rh5BG042300 Rh5CG045900 Rh5CG046000 Rh5CG046100 Rh5CG046200 Rh5CG046300 Rh5CG046400 Rh5CG046500 Rh5CG046600 Rh5CG046800 Rh5CG047000 Rh5CG047100 Rh5CG047300 Rh5CG047500 Rh5CG047600 Rh5CG267500 Rh5CG276200
rosa_wichuraiana Rw0G000290 Rw0G007740 Rw0G022180 Rw1G002050 Rw2G022580 Rw2G022600 Rw2G022620 Rw2G022650 Rw2G022660 Rw4G014100 Rw4G014220 Rw5G004100 Rw5G004110 Rw5G004120 Rw5G004130 Rw5G004140 Rw5G004160 Rw5G004170 Rw5G016790 Rw5G021680 Rw5G022380 Rw5G022450 Rw5G022470 Rw5G022490 Rw5G022540 Rw5G022570 Rw5G050160 Rw7G005200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1605, 2291
AasI GACNNNNNNGTC 1 cut(s) 888
AccB1I GGYRCC 1 cut(s) 516
AccB7I CCANNNNNTGG 2 cut(s) 231, 336
AccBSI CCGCTC 2 cut(s) 663, 1171
AccI GTMKAC 2 cut(s) 667, 1076
AccII CGCG 1 cut(s) 1054
AccIII TCCGGA 1 cut(s) 2354
AclI AACGTT 1 cut(s) 348
AclWI GGATC 4 cut(s) 653, 845, 1190, 1348
AcoI YGGCCR 1 cut(s) 2342
AcsI RAATTY 6 cut(s) 63, 172, 842, 1246, 2194, 2327
AcuI CTGAAG 2 cut(s) 145, 2046
AcvI CACGTG 3 cut(s) 939, 1020, 1085
AcyI GRCGYC 1 cut(s) 84
AfaI GTAC 5 cut(s) 328, 565, 608, 1836, 2491
AfiI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2178
AflIII ACRYGT 3 cut(s) 1019, 1084, 2486
AgsI TTSAA 8 cut(s) 1460, 1568, 1676, 1754, 1972, 2100, 2193, 2303
AjnI CCWGG 2 cut(s) 752, 946
AjuI GAANNNNNNNTTGG 4 cut(s) 1560, 1575, 1592, 1607
AleI CACNNNNGTG 1 cut(s) 2314
AloI GAACNNNNNNTCC 2 cut(s) 485, 517
Alw26I GTCTC 5 cut(s) 133, 853, 1639, 1906, 2436
AlwI GGATC 4 cut(s) 653, 845, 1190, 1348
Ama87I CYCGRG 2 cut(s) 547, 856
Aor13HI TCCGGA 1 cut(s) 2354
AoxI GGCC 4 cut(s) 298, 637, 1941, 2342
ApeKI GCWGC 1 cut(s) 1596
ApoI RAATTY 6 cut(s) 63, 172, 842, 1246, 2194, 2327
Asp700I GAANNNNTTC 1 cut(s) 1695
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 5 cut(s) 319, 339, 501, 638, 890
AsuC2I CCSGG 4 cut(s) 168, 548, 549, 1444
AsuHPI GGTGA 8 cut(s) 128, 302, 354, 790, 957, 2061, 2276, 2388
AsuII TTCGAA 1 cut(s) 954
AvaI CYCGRG 2 cut(s) 547, 856
AvaII GGWCC 4 cut(s) 319, 339, 501, 890
BaeI ACNNNNGTAYC 2 cut(s) 310, 343
BanI GGYRCC 1 cut(s) 516
BauI CACGAG 2 cut(s) 809, 1219
BbrPI CACGTG 3 cut(s) 939, 1020, 1085
BbsI GAAGAC 1 cut(s) 729
BbvI GCAGC 1 cut(s) 1583
BccI CCATC 8 cut(s) 107, 113, 287, 577, 651, 1126, 1207, 1616
BceAI ACGGC 2 cut(s) 1095, 1622
BcgI CGANNNNNNTGC 2 cut(s) 2287, 2321
BciT130I CCWGG 2 cut(s) 754, 948
BciVI GTATCC 2 cut(s) 385, 2193
BclI TGATCA 2 cut(s) 765, 820
BcnI CCSGG 4 cut(s) 168, 548, 549, 1444
BcoDI GTCTC 5 cut(s) 133, 853, 1639, 1906, 2436
BfaI CTAG 9 cut(s) 60, 132, 152, 1337, 1662, 1881, 2001, 2138, 2436
BfmI CTRYAG 1 cut(s) 2259
BfuI GTATCC 2 cut(s) 385, 2193
BglII AGATCT 1 cut(s) 1933
BisI GCNGC 2 cut(s) 637, 1597
BlsI GCNGC 2 cut(s) 638, 1598
BmcAI AGTACT 1 cut(s) 1836
Bme1390I CCNGG 6 cut(s) 168, 548, 549, 754, 948, 1444
Bme18I GGWCC 4 cut(s) 319, 339, 501, 890
BmeT110I CYCGRG 2 cut(s) 547, 856
BmgT120I GGNCC 5 cut(s) 319, 339, 501, 638, 890
BmiI GGNNCC 3 cut(s) 518, 694, 2170
BmrFI CCNGG 6 cut(s) 168, 548, 549, 754, 948, 1444
BmrI ACTGGG 1 cut(s) 248
BmsI GCATC 2 cut(s) 21, 632
BmuI ACTGGG 1 cut(s) 248
BpiI GAAGAC 1 cut(s) 729
BpmI CTGGAG 1 cut(s) 1029
Bpu14I TTCGAA 1 cut(s) 954
BpuEI CTTGAG 1 cut(s) 434
BpuMI CCSGG 4 cut(s) 168, 548, 549, 1444
Bsa29I ATCGAT 2 cut(s) 281, 2250
BsaAI YACGTR 3 cut(s) 939, 1020, 1085
BsaBI GATNNNNATC 1 cut(s) 1772
BsaHI GRCGYC 1 cut(s) 84
BsaJI CCNNGG 6 cut(s) 166, 547, 641, 753, 947, 1666
BsaWI WCCGGW 3 cut(s) 503, 1066, 2354
BsaXI ACNNNNNCTCC 6 cut(s) 36, 66, 288, 318, 1544, 1574
Bsc4I CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2178
Bse1I ACTGG 5 cut(s) 254, 500, 671, 1474, 2155
Bse3DI GCAATG 2 cut(s) 1954, 2088
Bse8I GATNNNNATC 1 cut(s) 1772
BseAI TCCGGA 1 cut(s) 2354
BseBI CCWGG 2 cut(s) 754, 948
BseCI ATCGAT 2 cut(s) 281, 2250
BseDI CCNNGG 6 cut(s) 166, 547, 641, 753, 947, 1666
BseGI GGATG 3 cut(s) 1171, 1395, 2447
BseJI GATNNNNATC 1 cut(s) 1772
BseLI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2178
BseMI GCAATG 2 cut(s) 1954, 2088
BseMII CTCAG 3 cut(s) 191, 471, 924
BseNI ACTGG 5 cut(s) 254, 500, 671, 1474, 2155
BseXI GCAGC 1 cut(s) 1583
Bsh1236I CGCG 1 cut(s) 1054
BshFI GGCC 4 cut(s) 300, 639, 1943, 2344
BshNI GGYRCC 1 cut(s) 516
BshVI ATCGAT 2 cut(s) 281, 2250
BsiHKCI CYCGRG 2 cut(s) 547, 856
BsiSI CCGG 6 cut(s) 168, 504, 548, 1067, 1443, 2355
BslFI GGGAC 4 cut(s) 87, 665, 770, 1220
BslI CCNNNNNNNGG 6 cut(s) 231, 336, 554, 647, 1377, 2178
BsmAI GTCTC 5 cut(s) 133, 853, 1639, 1906, 2436
BsmBI CGTCTC 1 cut(s) 853
BsmFI GGGAC 4 cut(s) 87, 665, 770, 1220
BsmI GAATGC 3 cut(s) 1165, 2167, 2298
BsnI GGCC 4 cut(s) 300, 639, 1943, 2344
BsoBI CYCGRG 2 cut(s) 547, 856
Bsp119I TTCGAA 1 cut(s) 954
Bsp13I TCCGGA 1 cut(s) 2354
Bsp1407I TGTACA 3 cut(s) 563, 606, 2489
BspANI GGCC 4 cut(s) 300, 639, 1943, 2344
BspCNI CTCAG 3 cut(s) 190, 470, 923
BspDI ATCGAT 2 cut(s) 281, 2250
BspEI TCCGGA 1 cut(s) 2354
BspFNI CGCG 1 cut(s) 1054
BspHI TCATGA 3 cut(s) 1489, 1860, 1900
BspLI GGNNCC 3 cut(s) 518, 694, 2170
BspPI GGATC 4 cut(s) 653, 845, 1190, 1348
BspQI GCTCTTC 2 cut(s) 1488, 2394
BspT104I TTCGAA 1 cut(s) 954
BspT107I GGYRCC 1 cut(s) 516
BsrBI CCGCTC 2 cut(s) 663, 1171
BsrDI GCAATG 2 cut(s) 1954, 2088
BsrGI TGTACA 3 cut(s) 563, 606, 2489
BsrI ACTGG 5 cut(s) 254, 500, 671, 1474, 2155
BssECI CCNNGG 6 cut(s) 166, 547, 641, 753, 947, 1666
BssNI GRCGYC 1 cut(s) 84
BssSI CACGAG 2 cut(s) 809, 1219
BssT1I CCWWGG 2 cut(s) 641, 1666
Bst2BI CACGAG 2 cut(s) 809, 1219
Bst2UI CCWGG 2 cut(s) 754, 948
Bst4CI ACNGT 4 cut(s) 101, 688, 885, 905
Bst6I CTCTTC 5 cut(s) 1488, 1671, 1755, 1825, 2394
BstACI GRCGYC 1 cut(s) 84
BstAUI TGTACA 3 cut(s) 563, 606, 2489
BstBAI YACGTR 3 cut(s) 939, 1020, 1085
BstBI TTCGAA 1 cut(s) 954
BstC8I GCNNGC 6 cut(s) 71, 137, 934, 1326, 1945, 2506
BstDEI CTNAG 5 cut(s) 177, 457, 910, 1307, 1916
BstF5I GGATG 3 cut(s) 1171, 1395, 2447
BstFNI CGCG 1 cut(s) 1054
BstHHI GCGC 1 cut(s) 1054
BstMAI GTCTC 5 cut(s) 133, 853, 1639, 1906, 2436
BstMWI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
BstNI CCWGG 2 cut(s) 754, 948
BstNSI RCATGY 1 cut(s) 2490
BstSCI CCNGG 6 cut(s) 166, 546, 547, 752, 946, 1442
BstSFI CTRYAG 1 cut(s) 2259
BstUI CGCG 1 cut(s) 1054
BstV1I GCAGC 1 cut(s) 1583
BstV2I GAAGAC 1 cut(s) 729
BstX2I RGATCY 2 cut(s) 1340, 1933
BstXI CCANNNNNNTGG 2 cut(s) 388, 2044
BstYI RGATCY 2 cut(s) 1340, 1933
Bsu15I ATCGAT 2 cut(s) 281, 2250
BsuI GTATCC 2 cut(s) 385, 2193
BsuRI GGCC 4 cut(s) 300, 639, 1943, 2344
BsuTUI ATCGAT 2 cut(s) 281, 2250
BtsCI GGATG 3 cut(s) 1171, 1395, 2447
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 3 cut(s) 261, 464, 890
Cac8I GCNNGC 6 cut(s) 71, 137, 934, 1326, 1945, 2506
CciI TCATGA 3 cut(s) 1489, 1860, 1900
CfoI GCGC 1 cut(s) 1054
Cfr13I GGNCC 5 cut(s) 319, 339, 501, 638, 890
Cfr9I CCCGGG 1 cut(s) 547
ClaI ATCGAT 2 cut(s) 281, 2250
CpoI CGGWCCG 1 cut(s) 501
CseI GACGC 3 cut(s) 92, 1274, 1863
Csp6I GTAC 5 cut(s) 327, 564, 607, 1835, 2490
CspI CGGWCCG 1 cut(s) 501
CviQI GTAC 5 cut(s) 327, 564, 607, 1835, 2490
DdeI CTNAG 5 cut(s) 177, 457, 910, 1307, 1916
DrdI GACNNNNNNGTC 1 cut(s) 888
DseDI GACNNNNNNGTC 1 cut(s) 888
EaeI YGGCCR 1 cut(s) 2342
Eam1104I CTCTTC 5 cut(s) 1488, 1671, 1755, 1825, 2394
EarI CTCTTC 5 cut(s) 1488, 1671, 1755, 1825, 2394
Eco130I CCWWGG 2 cut(s) 641, 1666
Eco147I AGGCCT 1 cut(s) 300
Eco47I GGWCC 4 cut(s) 319, 339, 501, 890
Eco57I CTGAAG 2 cut(s) 145, 2046
Eco72I CACGTG 3 cut(s) 939, 1020, 1085
Eco88I CYCGRG 2 cut(s) 547, 856
EcoRII CCWGG 2 cut(s) 752, 946
EcoT14I CCWWGG 2 cut(s) 641, 1666
ErhI CCWWGG 2 cut(s) 641, 1666
Esp3I CGTCTC 1 cut(s) 853
FaqI GGGAC 4 cut(s) 87, 665, 770, 1220
FauI CCCGC 4 cut(s) 624, 977, 1164, 2416
FauNDI CATATG 2 cut(s) 568, 2056
FbaI TGATCA 2 cut(s) 765, 820
FblI GTMKAC 2 cut(s) 667, 1076
Fnu4HI GCNGC 2 cut(s) 637, 1597
FokI GGATG 3 cut(s) 1178, 1402, 2434
Fsp4HI GCNGC 2 cut(s) 637, 1597
FspBI CTAG 9 cut(s) 60, 132, 152, 1337, 1662, 1881, 2001, 2138, 2436
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 2 cut(s) 637, 1597
GsuI CTGGAG 1 cut(s) 1029
HaeIII GGCC 4 cut(s) 300, 639, 1943, 2344
HapII CCGG 6 cut(s) 168, 504, 548, 1067, 1443, 2355
HgaI GACGC 3 cut(s) 92, 1274, 1863
HhaI GCGC 1 cut(s) 1054
Hin1I GRCGYC 1 cut(s) 84
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HincII GTYRAC 2 cut(s) 1264, 1449
HindII GTYRAC 2 cut(s) 1264, 1449
HindIII AAGCTT 2 cut(s) 383, 1574
HpaII CCGG 6 cut(s) 168, 504, 548, 1067, 1443, 2355
HphI GGTGA 8 cut(s) 128, 302, 354, 790, 957, 2061, 2276, 2388
Hpy166II GTNNAC 5 cut(s) 668, 1077, 1090, 1264, 1449
Hpy188I TCNGA 8 cut(s) 97, 110, 460, 913, 1510, 1701, 2110, 2204
Hpy8I GTNNAC 5 cut(s) 668, 1077, 1090, 1264, 1449
HpyCH4III ACNGT 4 cut(s) 101, 688, 885, 905
HpyCH4IV ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
HpyF10VI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
HpyF3I CTNAG 5 cut(s) 177, 457, 910, 1307, 1916
HpySE526I ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
Hsp92I GRCGYC 1 cut(s) 84
HspAI GCGC 1 cut(s) 1052
Kpn2I TCCGGA 1 cut(s) 2354
Ksp22I TGATCA 2 cut(s) 765, 820
LguI GCTCTTC 2 cut(s) 1488, 2394
LmnI GCTCC 4 cut(s) 660, 692, 1010, 2017
Lsp1109I GCAGC 1 cut(s) 1583
LweI GCATC 2 cut(s) 21, 632
MaeI CTAG 9 cut(s) 60, 132, 152, 1337, 1662, 1881, 2001, 2138, 2436
MaeII ACGT 6 cut(s) 92, 189, 348, 938, 1019, 1084
MaeIII GTNAC 7 cut(s) 349, 905, 1192, 1512, 2067, 2146, 2482
MbiI CCGCTC 2 cut(s) 663, 1171
MfeI CAATTG 1 cut(s) 2493
MflI RGATCY 2 cut(s) 1340, 1933
MlyI GAGTC 7 cut(s) 204, 752, 902, 1064, 2244, 2438, 2440
MmeI TCCRAC 5 cut(s) 172, 670, 1738, 1826, 2029
MroI TCCGGA 1 cut(s) 2354
MroXI GAANNNNTTC 1 cut(s) 1695
MseI TTAA 4 cut(s) 1431, 1683, 1818, 1841
MslI CAYNNNNRTG 2 cut(s) 1097, 2314
MspI CCGG 6 cut(s) 168, 504, 548, 1067, 1443, 2355
MspR9I CCNGG 6 cut(s) 168, 548, 549, 754, 948, 1444
MunI CAATTG 1 cut(s) 2493
Mva1269I GAATGC 3 cut(s) 1165, 2167, 2298
MvaI CCWGG 2 cut(s) 754, 948
MvnI CGCG 1 cut(s) 1054
MwoI GCNNNNNNNGC 3 cut(s) 496, 1286, 1325
NciI CCSGG 4 cut(s) 168, 548, 549, 1444
NdeI CATATG 2 cut(s) 568, 2056
NlaIV GGNNCC 3 cut(s) 518, 694, 2170
NmuCI GTSAC 4 cut(s) 905, 1192, 2067, 2482
NspI RCATGY 1 cut(s) 2490
NspV TTCGAA 1 cut(s) 954
OliI CACNNNNGTG 1 cut(s) 2314
PagI TCATGA 3 cut(s) 1489, 1860, 1900
PceI AGGCCT 1 cut(s) 300
PciI ACATGT 1 cut(s) 2486
PciSI GCTCTTC 2 cut(s) 1488, 2394
PctI GAATGC 3 cut(s) 1165, 2167, 2298
PdmI GAANNNNTTC 1 cut(s) 1695
PfeI GAWTC 8 cut(s) 263, 788, 956, 1768, 1907, 2252, 2267, 2381
PflMI CCANNNNNTGG 2 cut(s) 231, 336
PkrI GCNGC 2 cut(s) 638, 1598
PleI GAGTC 7 cut(s) 203, 752, 902, 1064, 2243, 2438, 2439
PmaCI CACGTG 3 cut(s) 939, 1020, 1085
PmlI CACGTG 3 cut(s) 939, 1020, 1085
PpsI GAGTC 7 cut(s) 203, 752, 902, 1064, 2243, 2438, 2439
Ppu21I YACGTR 3 cut(s) 939, 1020, 1085
PscI ACATGT 1 cut(s) 2486
PsiI TTATAA 2 cut(s) 1605, 2291
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 2 cut(s) 752, 946
PspCI CACGTG 3 cut(s) 939, 1020, 1085
PspGI CCWGG 2 cut(s) 752, 946
PspN4I GGNNCC 3 cut(s) 518, 694, 2170
PspPI GGNCC 5 cut(s) 319, 339, 501, 638, 890
PsuI RGATCY 2 cut(s) 1340, 1933
RsaI GTAC 5 cut(s) 328, 565, 608, 1836, 2491
RsaNI GTAC 5 cut(s) 327, 564, 607, 1835, 2490
RseI CAYNNNNRTG 2 cut(s) 1097, 2314
Rsr2I CGGWCCG 1 cut(s) 501
RsrII CGGWCCG 1 cut(s) 501
SapI GCTCTTC 2 cut(s) 1488, 2394
SaqAI TTAA 4 cut(s) 1431, 1683, 1818, 1841
SatI GCNGC 2 cut(s) 637, 1597
Sau96I GGNCC 5 cut(s) 319, 339, 501, 638, 890
ScaI AGTACT 1 cut(s) 1836
SchI GAGTC 7 cut(s) 204, 752, 902, 1064, 2244, 2438, 2440
ScrFI CCNGG 6 cut(s) 168, 548, 549, 754, 948, 1444
SfaNI GCATC 2 cut(s) 21, 632
SfcI CTRYAG 1 cut(s) 2259
SfuI TTCGAA 1 cut(s) 954
SinI GGWCC 4 cut(s) 319, 339, 501, 890
SmaI CCCGGG 1 cut(s) 549
SmiMI CAYNNNNRTG 2 cut(s) 1097, 2314
SmlI CTYRAG 1 cut(s) 413
SmoI CTYRAG 1 cut(s) 413
SseBI AGGCCT 1 cut(s) 300
SspMI CTAG 9 cut(s) 60, 132, 152, 1337, 1662, 1881, 2001, 2138, 2436
StuI AGGCCT 1 cut(s) 300
StyD4I CCNGG 6 cut(s) 166, 546, 547, 752, 946, 1442
StyI CCWWGG 2 cut(s) 641, 1666
TaaI ACNGT 4 cut(s) 101, 688, 885, 905
TaiI ACGT 6 cut(s) 95, 192, 351, 941, 1022, 1087
TaqI TCGA 6 cut(s) 15, 281, 954, 1258, 1910, 2250
TaqII GACCGA 1 cut(s) 336
TatI WGTACW 4 cut(s) 563, 606, 1834, 2489
TauI GCSGC 1 cut(s) 639
TfiI GAWTC 8 cut(s) 263, 788, 956, 1768, 1907, 2252, 2267, 2381
Tru1I TTAA 4 cut(s) 1431, 1683, 1818, 1841
Tru9I TTAA 4 cut(s) 1431, 1683, 1818, 1841
TscAI CASTG 3 cut(s) 261, 471, 890
TseFI GTSAC 4 cut(s) 905, 1192, 2067, 2482
TseI GCWGC 1 cut(s) 1596
Tsp45I GTSAC 4 cut(s) 905, 1192, 2067, 2482
TspMI CCCGGG 1 cut(s) 547
TspRI CASTG 3 cut(s) 261, 471, 890
Van91I CCANNNNNTGG 2 cut(s) 231, 336
VpaK11BI GGWCC 4 cut(s) 319, 339, 501, 890
XapI RAATTY 6 cut(s) 63, 172, 842, 1246, 2194, 2327
XbaI TCTAGA 1 cut(s) 59
XceI RCATGY 1 cut(s) 2490
XmaI CCCGGG 1 cut(s) 547
XmiI GTMKAC 2 cut(s) 667, 1076
XmnI GAANNNNTTC 1 cut(s) 1695
XspI CTAG 9 cut(s) 60, 132, 152, 1337, 1662, 1881, 2001, 2138, 2436
ZrmI AGTACT 1 cut(s) 1836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.